Pregenerated sensors for GPAT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031545Ensembl transcript IDs: ENSMUST00000167004.3, ENSMUST00000209507.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACGGAGCTCTGACGCAGCTCCAGTCCTGGAGTCCAGAACAGCCTaGGGGCCAGAGTCCGGAAGGATGCAGCAGTGGGTGGCGGGGATG | + |
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Preference number: 1 (lower is better) Translates to: PRSSDAAPVLESRTA*GPESGRMQQWVAGM Trigger: CATCCCCGCCACCCACTGCTGCATCCTTCCGGACTCTGGCCCTCAGGCTGTTCTGGACTCCAGGACTGGAGCTGCGTCAGAGCTCCGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR TCA 90 bp | GGAATTCAGCTCCATCAAAGCTCTACCCGGGGGCCCTGGCCAGGCTaGCACCGTCTGGTGGGCCTCCCTCCTCTTTCCAGGGTGGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: GIQLHQSSTRGPWPG*HRLVGLPPLSRVGV Trigger: CACCCCCACCCTGGAAAGAGGAGGGAGGCCCACCAGACGGTGTCAGCCTGGCCAGGGCCCCCGGGTAGAGCTTTGATGGAGCTGAATTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR TCA 90 bp | CCAATGAGGAGCCTGTGGGAAGCAGCAGAGCAGCTGGACGCGTGCTaGGCAAGGCCCCGGGAACTGCACCCAATTCTTCTCTGCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PMRSLWEAAEQLDAC*ARPRELHPILLCCS Trigger: GCTGCAGCAGAGAAGAATTGGGTGCAGTTCCCGGGGCCTTGCTCAGCACGCGTCCAGCTGCTCTGCTGCTTCCCACAGGCTCCTCATTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR GCA 90 bp | GTGGACCTCAGAAGGAAGGACAGAAGGCTGACTGCATCTGCGGAGTaGCCTGCAGGCCTGCCTTGTCCCTTGCAGTCACGGCACACGCAG | + |
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Preference number: 1 (lower is better) Translates to: VDLRRKDRRLTASAE*PAGLPCPLQSRHTQ Trigger: CTGCGTGTGCCGTGACTGCAAGGGACAAGGCAGGCCTGCAGGGCACTCCGCAGATGCAGTCAGCCTTCTGTCCTTCCTTCTGAGGTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR CCA 90 bp | GGTGGCGGGGATGACGGTAGAGGCTGTGGCAGCAACAACTGCAGCTaGCTCACACTTCAGGATTTAGAGGTGGCGGCTTCAGCCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: GGGDDGRGCGSNNCS*LTLQDLEVAASAST Trigger: TGTGCTGGCTGAAGCCGCCACCTCTAAATCCTGAAGTGTGAGCCAGCTGCAGTTGTTGCTGCCACAGCCTCTACCGTCATCCCCGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR TCA 90 bp | TCCTGGGCAGCAGCTGTAGCTCTGACCTTGTCCTGCCACGCTCTCTaGAGCTGTCCCTGGGAGAGCAGCACACATTTCCTTCACACGCAC | + |
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Preference number: 1 (lower is better) Translates to: SWAAAVALTLSCHAL*SCPWESSTHFLHTH Trigger: GTGCGTGTGAAGGAAATGTGTGCTGCTCTCCCAGGGACAGCTTCAGAGAGCGTGGCAGGACAAGGTCAGAGCTACAGCTGCTGCCCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR TCA 90 bp | GGAGGAATTCAAAGCTGGTGGACCTCAGAAGGAAGGACAGAAGGCTaGCTGCATCTGCGGAGTGCCCTGCAGGCCTGCCTTGTCCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: GGIQSWWTSEGRTEG*LHLRSALQACLVPC Trigger: GCAAGGGACAAGGCAGGCCTGCAGGGCACTCCGCAGATGCAGTCAGCCTTCTGTCCTTCCTTCTGAGGTCCACCAGCTTTGAATTCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR GCA 90 bp | TCCCTCCTGACTCACCAGTTCTTCCCAGCACCTCTGCGCCATCCTTaGCCCCACTACTCGCTGTTCTCCACCACGCTTGAACCCAGAATG | + |
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Preference number: 1 (lower is better) Translates to: SLLTHQFFPAPLRHP*PHYSLFSTTLEPRM Trigger: CATTCTGGGTTCAAGCGTGGTGGAGAACAGCGAGTAGTGGGGGCAAGGATGGCGCAGAGGTGCTGGGAAGAACTGGTGAGTCAGGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR CCA 90 bp | ACTGGGGGAGAGGGGAGTGGGTGCGGTGAGAGACGGATGGCTGGATaGTCATCTCTTAGCCTGTCCAAGAGTCTGTGCGTGAACTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: TGGEGSGCGERRMAG*SSLSLSKSLCVNWD Trigger: ATCCCAGTTCACGCACAGACTCTTGGACAGGCTAAGAGATGACCATCCAGCCATCCGTCTCTCACCGCACCCACTCCCCTCTCCCCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR TCA 90 bp | TCTGCGCCATCCTTGCCCCCACTACTCGCTGTTCTCCACCACGCTTaGACCCAGAATGCCTCTGACAGGACCCTTTCCCCCAATCTCATC | + |
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Preference number: 1 (lower is better) Translates to: SAPSLPPLLAVLHHA*TQNASDRTLSPNLI Trigger: GATGAGATTGGGGGAAAGGGTCCTGTCAGAGGCATTCTGGGTTCAAGCGTGGTGGAGAACAGCGAGTAGTGGGGGCAAGGATGGCGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR TCA 90 bp | AACTGGGATAGCCCAGGCCACACGGGATGTTGCGCCCGGAGAAACTaGGTCTGGCAACTAAGATGTACAGCTGGGGCCAGCAGTGAACAG | + |
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Preference number: 1 (lower is better) Translates to: NWDSPGHTGCCARRN*VWQLRCTAGASSEQ Trigger: CTGTTCACTGCTGGCCCCAGCTGTACATCTTAGTTGCCAGACTCAGTTTCTCCGGGCGCAACATCCCGTGTGGCCTGGGCTATCCCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR GCA 90 bp | GAATTCAAAGCTGGTGGACCTCAGAAGGAAGGACAGAAGGCTGACTaGATCTGCGGAGTGCCCTGCAGGCCTGCCTTGTCCCTTGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: EFKAGGPQKEGQKAD*ICGVPCRPALSLAV Trigger: GACTGCAAGGGACAAGGCAGGCCTGCAGGGCACTCCGCAGATGCAGTCAGCCTTCTGTCCTTCCTTCTGAGGTCCACCAGCTTTGAATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR CCA 90 bp | GGCCAGGCTGACACCGTCTGGTGGGCCTCCCTCCTCTTTCCAGGGTaGGGGTGCATTTTAGTAGCCCGATTAACGAATTCTTTACCTAGC | + |
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Preference number: 1 (lower is better) Translates to: GQADTVWWASLLFPG*GCILVARLTNSLPS Trigger: GCTAGGTAAAGAATTCGTTAATCGGGCTACTAAAATGCACCCCCACCCTGGAAAGAGGAGGGAGGCCCACCAGACGGTGTCAGCCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR CCA 90 bp | GGATTCAGGCTCAGCCTGGGGCTAGCTAACTGCCCAGGAGCCCACTaGCTCTTCCTATCTCCTCTGGTGATCTTCATAAGCAGGAACACA | + |
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Preference number: 1 (lower is better) Translates to: GFRLSLGLANCPGAH*LFLSPLVIFISRNT Trigger: TGTGTTCCTGCTTATGAAGATCACCAGAGGAGATAGGAAGAGCCAGTGGGCTCCTGGGCAGTTAGCTAGCCCCAGGCTGAGCCTGAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR CCA 90 bp | TGGCAGGAAGTTAGGGTGACACCACAGGGTCCTCAAGTATCAGAGTaGCATCAGTTCATAGTCTCGGGAGCCAGGCTGCCCTCCTACAAC | + |
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Preference number: 1 (lower is better) Translates to: WQEVRVTPQGPQVSE*HQFIVSGARLPSYN Trigger: GTTGTAGGAGGGCAGCCTGGCTCCCGAGACTATGAACTGATGCCACTCTGATACTTGAGGACCCTGTGGTGTCACCCTAACTTCCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR TCA 90 bp | TCTTCCATGGTGCAGAGTTTATATGTAAGACCAACCCTGTACCAATaGGGAGCCTGTGGGAAGCAGCAGAGCAGCTGGACGCGTGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: SSMVQSLYVRPTLYQ*GACGKQQSSWTRAE Trigger: CTCAGCACGCGTCCAGCTGCTCTGCTGCTTCCCACAGGCTCCTCATTGGTACAGGGTTGGTCTTACATATAAACTCTGCACCATGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR CCA 90 bp | GCCATCACGGAACAGTGGCACGTGGGTAGGTGGGTAATCTTCCTTTaGAGGAATTCAAAGCTGGTGGACCTCAGAAGGAAGGACAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: AITEQWHVGRWVIFL*RNSKLVDLRRKDRR Trigger: CCTTCTGTCCTTCCTTCTGAGGTCCACCAGCTTTGAATTCCTCCAAAGGAAGATTACCCACCTACCCACGTGCCACTGTTCCGTGATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR GCA 90 bp | CAGCAGGCTGACAAACTGGAGGGAAGCTCTCTAGTACCCAGGCTGTaGCCGGGAACCTACTTTCTTCTTCCATGGTGCAGAGTTTATATG | + |
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Preference number: 1 (lower is better) Translates to: QQADKLEGSSLVPRL*PGTYFLLPWCRVYM Trigger: CATATAAACTCTGCACCATGGAAGAAGAAAGTAGGTTCCCGGGCACAGCCTGGGTACTAGAGAGCTTCCCTCCAGTTTGTCAGCCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR TCA 90 bp | GACTTACAAGTGATTATTTATCAAAAGACCATTAATAGCAGGTACTaGAATGATGTGTTACTGGGTGGTGCTGAGAGACTAATAGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: DLQVIIYQKTINSRY*NDVLLGGAERLIGN Trigger: ATTTCCTATTAGTCTCTCAGCACCACCCAGTAACACATCATTTCAGTACCTGCTATTAATGGTCTTTTGATAAATAATCACTTGTAAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR CAA 90 bp | GGACAGAAGGCTGACTGCATCTGCGGAGTGCCCTGCAGGCCTGCCTaGTCCCTTGCAGTCACGGCACACGCAGTGTGCCCATCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GQKADCICGVPCRPA*SLAVTAHAVCPSLL Trigger: CAGGAGGGATGGGCACACTGCGTGTGCCGTGACTGCAAGGGACAAGGCAGGCCTGCAGGGCACTCCGCAGATGCAGTCAGCCTTCTGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTGGGTGCGGTGAGAGACGGATGGCTGGATGGTCATCTCTTAGCCTGTCCCCGGGGTGGGGGCAGTaGTTAGCGTCCCAAGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GSGCGERRMAGWSSLSLSPGWGQ*LASQVG Trigger: TCCAACTTGGGACGCTAACCACTGCCCCCACCCCGG...GGACAGGCTAAGAGATGACCATCCAGCCATCCGTCTCTCACCGCACCCACTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCACCTCTGCGCCATCCTTGCCCCCACTACTCGCTGTTCTCCACCACGCGAGCCTACCCTGTCCTaGGCCTCTTCTCACTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SQHLCAILAPTTRCSPPREPTLS*ASSHFR Trigger: TCTGAAGTGAGAAGAGGCTCAGGACAGGGTAGGCTC...GCGTGGTGGAGAACAGCGAGTAGTGGGGGCAAGGATGGCGCAGAGGTGCTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR GCA 90 bp | ATGGACCCTGAGACTGTCCTCAGGCCTCCACACCCGCCACACCCACACACACATGCCTGCCTTGTCCCTTaGAGTCACGGCACACGCAGT | + |
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Preference number: 2 (lower is better) Translates to: MDPETVLRPPHPPHPHTHACLVP*SHGTRS Trigger: ACTGCGTGTGCCGTGACTGCAAGGGACAAGGCAGGC...ATGTGTGTGTGGGTGTGGCGGGTGTGGAGGCCTGAGGACAGTCTCAGGGTCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCAGAAGCATTCTGGTTAGAGGACAGCAGGCAGCCCACGGAGCTCTGACGGGAAGGATGCAGCAGTaGGTGGCGGGGATGACGGTA | + |
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Preference number: 2 (lower is better) Translates to: PARSILVRGQQAAHGALTGRMQQ*VAGMTV Trigger: TACCGTCATCCCCGCCACCCACTGCTGCATCCTTCC...CGTCAGAGCTCCGTGGGCTGCCTGCTGTCCTCTAACCAGAATGCTTCTGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAGTGGGTGCGGTGAGAGACGGATGGCTGGATGGTCATCTCTTAGCCTGTCCCAGAGAGCAGCAGGCTaGCAAACTGGAGGGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: GSGCGERRMAGWSSLSLSQRAAG*QTGGKL Trigger: GAGCTTCCCTCCAGTTTGTCAGCCTGCTGCTCTCTG...GGACAGGCTAAGAGATGACCATCCAGCCATCCGTCTCTCACCGCACCCACTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTGGGTGCGGTGAGAGACGGATGGCTGGATGGTCATCTCTTAGCCTGTCCGCCATCACGGAACAGTaGCACGTGGGTAGGTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: GSGCGERRMAGWSSLSLSAITEQ*HVGRWV Trigger: TACCCACCTACCCACGTGCCACTGTTCCGTGATGGC...GGACAGGCTAAGAGATGACCATCCAGCCATCCGTCTCTCACCGCACCCACTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCACCAGTTCTTCCCAGCACCTCTGCGCCATCCTTGCCCCCACTACTCGCTGCTTCTCACTTCAGAGTaGGGCAGAGACCCAGCCATC | + |
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Preference number: 2 (lower is better) Translates to: THQFFPAPLRHPCPHYSLLLTSE*GRDPAI Trigger: GATGGCTGGGTCTCTGCCCCACTCTGAAGTGAGAAG...CAGCGAGTAGTGGGGGCAAGGATGGCGCAGAGGTGCTGGGAAGAACTGGTGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTACCCGGGGGCCCTGGCCAGGCTGACACCGTCTGGTGGGCCTCCCTCCTCTAATATCTCCATCACTTaGAAAAGTGCCATCACGGAA | + |
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Preference number: 2 (lower is better) Translates to: LYPGALARLTPSGGPPSSNISIT*KSAITE Trigger: TTCCGTGATGGCACTTTTCCAAGTGATGGAGATATT...AGAGGAGGGAGGCCCACCAGACGGTGTCAGCCTGGCCAGGGCCCCCGGGTAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR TCA 90 bp | GAATTCAAAGCTGGTGGACCTCAGAAGGAAGGACAGAAGGCTGACTGCATCTGCGAGTCCAGAACAGCCTaGGGGCCAGAGTCCGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: EFKAGGPQKEGQKADCICESRTA*GPESGR Trigger: CCTTCCGGACTCTGGCCCTCAGGCTGTTCTGGACTC...GCAGATGCAGTCAGCCTTCTGTCCTTCCTTCTGAGGTCCACCAGCTTTGAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGGGTGAAAACTGTGACCTGCAATCCCAACTACCCAGCAGGTTTGGCCCCGTGAGGCTGGGGAGCTaGCAGGAAGTTAGGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: CLGENCDLQSQLPSRFGPVRLGS*QEVRVT Trigger: TGTCACCCTAACTTCCTGCCAGCTCCCCAGCCTCAC...GGGGCCAAACCTGCTGGGTAGTTGGGATTGCAGGTCACAGTTTTCACCCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR TCA 90 bp | CATGTCTGGGTGAAAACTGTGACCTGCAATCCCAACTACCCAGCAGGTTTGGCCCCCACAACAACCCTGTaGGGTAGGCACACCACCATC | + |
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Preference number: 2 (lower is better) Translates to: HVWVKTVTCNPNYPAGLAPTTTL*GRHTTI Trigger: GATGGTGGTGTGCCTACCTCACAGGGTTGTTGTGGG...GGCCAAACCTGCTGGGTAGTTGGGATTGCAGGTCACAGTTTTCACCCAGACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR GCA 90 bp | GGGAGTGGGTGCGGTGAGAGACGGATGGCTGGATGGTCATCTCTTAGCCTGTCCGTGAAAACTGTGACCTaGAATCCCAACTACCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GSGCGERRMAGWSSLSLSVKTVT*NPNYPA Trigger: TGCTGGGTAGTTGGGATTGCAGGTCACAGTTTTCAC...GGACAGGCTAAGAGATGACCATCCAGCCATCCGTCTCTCACCGCACCCACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | GCGCTTGCACTGCAAGCATGGAGACCCGAGTTCCAGCCCCTAGGAAGGTGGATTGGAATTCAAAGCTGGTaGACCTCAGAAGGAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: ALALQAWRPEFQPLGRWIGIQSW*TSEGRT Trigger: TGTCCTTCCTTCTGAGGTCCACCAGCTTTGAATTCC...AATCCACCTTCCTAGGGGCTGGAACTCGGGTCTCCATGCTTGCAGTGCAAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR GCA 90 bp | AGGTGGGTAATCTTCCTTTGGAGGAATTCAAAGCTGGTGGACCTCAGAAGGAAGTCTTCCCAGCACCTCTaGGCCATCCTTGCCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: RWVIFLWRNSKLVDLRRKSSQHL*AILAPT Trigger: AGTGGGGGCAAGGATGGCGCAGAGGTGCTGGGAAGA...CTTCCTTCTGAGGTCCACCAGCTTTGAATTCCTCCAAAGGAAGATTACCCACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | ATGGACCCTGAGACTGTCCTCAGGCCTCCACACCCGCCACACCCACACACACATTGGGTAATCTTCCTTTaGAGGAATTCAAAGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: MDPETVLRPPHPPHPHTHWVIFL*RNSKLV Trigger: CACCAGCTTTGAATTCCTCCAAAGGAAGATTACCCA...ATGTGTGTGTGGGTGTGGCGGGTGTGGAGGCCTGAGGACAGTCTCAGGGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGGTAATCTTCCTTTGGAGGAATTCAAAGCTGGTGGACCTCAGAAGGAAGTGCCCAGGAGCCCACTaGCTCTTCCTATCTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RWVIFLWRNSKLVDLRRKCPGAH*LFLSPL Trigger: CAGAGGAGATAGGAAGAGCCAGTGGGCTCCTGGGCA...CTTCCTTCTGAGGTCCACCAGCTTTGAATTCCTCCAAAGGAAGATTACCCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | GCGCTTGCACTGCAAGCATGGAGACCCGAGTTCCAGCCCCTAGGAAGGTGGATTTCAGCTTGGTTCCCATaGCTCTTATCTAGGAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: ALALQAWRPEFQPLGRWISAWFP*LLSRRN Trigger: ATTTCTCCTAGATAAGAGCCATGGGAACCAAGCTGA...AATCCACCTTCCTAGGGGCTGGAACTCGGGTCTCCATGCTTGCAGTGCAAGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGGGTGAAAACTGTGACCTGCAATCCCAACTACCCAGCAGGTTTGGCCCCTACTTTCAGTCACAATaGTGGAGAGGTAGATCGAGG | + |
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Preference number: 2 (lower is better) Translates to: CLGENCDLQSQLPSRFGPYFQSQ*WRGRSR Trigger: CCTCGATCTACCTCTCCAGCATTGTGACTGAAAGTA...GGGGCCAAACCTGCTGGGTAGTTGGGATTGCAGGTCACAGTTTTCACCCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCAATAAACCACAAGCATGTGTTAAGGGACACCTGACCCTAGACAATTTCACTGCATCTGCGGAGTaGCCTGCAGGCCTGCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: QSNKPQACVKGHLTLDNFTASAE*PAGLPC Trigger: ACAAGGCAGGCCTGCAGGGCACTCCGCAGATGCAGT...GAAATTGTCTAGGGTCAGGTGTCCCTTAACACATGCTTGTGGTTTATTGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | CATGTCTGGGTGAAAACTGTGACCTGCAATCCCAACTACCCAGCAGGTTTGGCCCAAAATCAAGGAGAATaGACCCTGAGACTGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: HVWVKTVTCNPNYPAGLAQNQGE*TLRLSS Trigger: TGAGGACAGTCTCAGGGTCCATTCTCCTTGATTTTG...GGCCAAACCTGCTGGGTAGTTGGGATTGCAGGTCACAGTTTTCACCCAGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR TCA 90 bp | GTTAACCGGCAAGAAATACATTTCTCAGGAATGAAGGCAAAGTCCCTAAATTCATCCTGCCACGCTCTCTaGAGCTGTCCCTGGGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: VNRQEIHFSGMKAKSLNSSCHAL*SCPWES Trigger: GCTCTCCCAGGGACAGCTTCAGAGAGCGTGGCAGGA...TGAATTTAGGGACTTTGCCTTCATTCCTGAGAAATGTATTTCTTGCCGGTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAAGCATTTGCAAAATAGTTCCCAAGAGGCTGTTCTTAAGAGTCAGAGGTCCTCTGCGCCATCCTTaGCCCCACTACTCGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: FLSICKIVPKRLFLRVRGPLRHP*PHYSLF Trigger: GAACAGCGAGTAGTGGGGGCAAGGATGGCGCAGAGG...ACCTCTGACTCTTAAGAACAGCCTCTTGGGAACTATTTTGCAAATGCTTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAAGCATTTGCAAAATAGTTCCCAAGAGGCTGTTCTTAAGAGTCAGAGGTAAGGCTGACTGCATCTaGGGAGTGCCCTGCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: FLSICKIVPKRLFLRVRGKADCI*GVPCRP Trigger: AGGCCTGCAGGGCACTCCGCAGATGCAGTCAGCCTT...ACCTCTGACTCTTAAGAACAGCCTCTTGGGAACTATTTTGCAAATGCTTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGGTAATCTTCCTTTGGAGGAATTCAAAGCTGGTGGACCTCAGAAGGAAGGACTTTACCAGCATATaGCTGTTTCTACAGAAACAC | + |
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Preference number: 2 (lower is better) Translates to: RWVIFLWRNSKLVDLRRKDFTSI*LFLQKH Trigger: GTGTTTCTGTAGAAACAGCCATATGCTGGTAAAGTC...CTTCCTTCTGAGGTCCACCAGCTTTGAATTCCTCCAAAGGAAGATTACCCACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTTAAGCATTTGCAAAATAGTTCCCAAGAGGCTGTTCTTAAGAGTCAGAGGTTCATCAACCTCAGCTTaGTTCCCATGGCTCTTATCT | + |
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Preference number: 2 (lower is better) Translates to: FLSICKIVPKRLFLRVRGSSTSA*FPWLLS Trigger: AGATAAGAGCCATGGGAACCAAGCTGAGGTTGATGA...ACCTCTGACTCTTAAGAACAGCCTCTTGGGAACTATTTTGCAAATGCTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTTAAGCATTTGCAAAATAGTTCCCAAGAGGCTGTTCTTAAGAGTCAGAGGTAACAGACAGGGAAACTaGGACATATTAAACAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: FLSICKIVPKRLFLRVRGNRQGN*DILNKS Trigger: TGACTTGTTTAATATGTCTCAGTTTCCCTGTCTGTT...ACCTCTGACTCTTAAGAACAGCCTCTTGGGAACTATTTTGCAAATGCTTAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CCA 72 bp | GCTCTACCCGGGGGCCCTGGCCAGGCTGACACCGTCTaGTGGGCCTCCCTCCTCTTTCCAGGGTGGGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALPGGPGQADTV*WASLLFPGWGC Trigger: GCACCCCCACCCTGGAAAGAGGAGGGAGGCCCACCAGACGGTGTCAGCCTGGCCAGGGCCCCCGGGTAGAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | CTCCATCAAAGCTCTACCCGGGGGCCCTGGCCAGGCTaGCACCGTCTGGTGGGCCTCCCTCCTCTTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LHQSSTRGPWPG*HRLVGLPPLSR Trigger: CCTGGAAAGAGGAGGGAGGCCCACCAGACGGTGTCAGCCTGGCCAGGGCCCCCGGGTAGAGCTTTGATGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | TCTGACGCAGCTCCAGTCCTGGAGTCCAGAACAGCCTaGGGGCCAGAGTCCGGAAGGATGCAGCAGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SDAAPVLESRTA*GPESGRMQQWV Trigger: CACCCACTGCTGCATCCTTCCGGACTCTGGCCCTCAGGCTGTTCTGGACTCCAGGACTGGAGCTGCGTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | AGCCTGTGGGAAGCAGCAGAGCAGCTGGACGCGTGCTaGGCAAGGCCCCGGGAACTGCACCCAATTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLWEAAEQLDAC*ARPRELHPILL Trigger: GAGAAGAATTGGGTGCAGTTCCCGGGGCCTTGCTCAGCACGCGTCCAGCTGCTCTGCTGCTTCCCACAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR GCA 72 bp | AGCAGCTGGACGCGTGCTGAGCAAGGCCCCGGGAACTaGACCCAATTCTTCTCTGCTGCAGCCCAGGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSWTRAEQGPGN*TQFFSAAAQVS Trigger: ACTCACCTGGGCTGCAGCAGAGAAGAATTGGGTGCAGTTCCCGGGGCCTTGCTCAGCACGCGTCCAGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | TTGCAGTCACGGCACACGCAGTGTGCCCATCCCTCCTaGCTCACCAGTTCTTCCCAGCACCTCTGCGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LQSRHTQCAHPS*LTSSSQHLCAI Trigger: GATGGCGCAGAGGTGCTGGGAAGAACTGGTGAGTCAGGAGGGATGGGCACACTGCGTGTGCCGTGACTGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | AGCCCAGGCCACACGGGATGTTGCGCCCGGAGAAACTaGGTCTGGCAACTAAGATGTACAGCTGGGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SPGHTGCCARRN*VWQLRCTAGAS Trigger: GCTGGCCCCAGCTGTACATCTTAGTTGCCAGACTCAGTTTCTCCGGGCGCAACATCCCGTGTGGCCTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR GCA 72 bp | TGTGGGGGATTCAGGCTCAGCCTGGGGCTAGCTAACTaGCCAGGAGCCCACTGGCTCTTCCTATCTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CGGFRLSLGLAN*PGAHWLFLSPL Trigger: CAGAGGAGATAGGAAGAGCCAGTGGGCTCCTGGGCAGTTAGCTAGCCCCAGGCTGAGCCTGAATCCCCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR GCA 72 bp | AGAAGGAAGGACAGAAGGCTGACTGCATCTGCGGAGTaGCCTGCAGGCCTGCCTTGTCCCTTGCAGTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: RRKDRRLTASAE*PAGLPCPLQSR Trigger: CCGTGACTGCAAGGGACAAGGCAGGCCTGCAGGGCACTCCGCAGATGCAGTCAGCCTTCTGTCCTTCCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | CAAAGCTGGTGGACCTCAGAAGGAAGGACAGAAGGCTaGCTGCATCTGCGGAGTGCCCTGCAGGCCTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QSWWTSEGRTEG*LHLRSALQACL Trigger: AAGGCAGGCCTGCAGGGCACTCCGCAGATGCAGTCAGCCTTCTGTCCTTCCTTCTGAGGTCCACCAGCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR GCA 72 bp | GGCGGGGATGACGGTAGAGGCTGTGGCAGCAACAACTaGAGCTGGCTCACACTTCAGGATTTAGAGGTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: GGDDGRGCGSNN*SWLTLQDLEVA Trigger: CGCCACCTCTAAATCCTGAAGTGTGAGCCAGCTGCAGTTGTTGCTGCCACAGCCTCTACCGTCATCCCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CCA 72 bp | GAGGGGAGTGGGTGCGGTGAGAGACGGATGGCTGGATaGTCATCTCTTAGCCTGTCCAAGAGTCTGTGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: EGSGCGERRMAG*SSLSLSKSLCV Trigger: CACGCACAGACTCTTGGACAGGCTAAGAGATGACCATCCAGCCATCCGTCTCTCACCGCACCCACTCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CCA 72 bp | GTTAGGGTGACACCACAGGGTCCTCAAGTATCAGAGTaGCATCAGTTCATAGTCTCGGGAGCCAGGCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VRVTPQGPQVSE*HQFIVSGARLP Trigger: GGGCAGCCTGGCTCCCGAGACTATGAACTGATGCCACTCTGATACTTGAGGACCCTGTGGTGTCACCCTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | ACACGCACTAGCACTGGAATCCCCACAACAACCCTGTaGGGTAGGCACACCACCATCTCTCTCCGCAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: TRTSTGIPTTTL*GRHTTISLRNS Trigger: GGAATTGCGGAGAGAGATGGTGGTGTGCCTACCTCACAGGGTTGTTGTGGGGATTCCAGTGCTAGTGCGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | CGCTGTTCTCCACCACGCTTGAACCCAGAATGCCTCTaGCAGGACCCTTTCCCCCAATCTCATCAACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RCSPPRLNPECL*QDPFPQSHQPQ Trigger: CTGAGGTTGATGAGATTGGGGGAAAGGGTCCTGTCAGAGGCATTCTGGGTTCAAGCGTGGTGGAGAACAGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CCA 72 bp | GACACCGTCTGGTGGGCCTCCCTCCTCTTTCCAGGGTaGGGGTGCATTTTAGTAGCCCGATTAACGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: DTVWWASLLFPG*GCILVARLTNS Trigger: AGAATTCGTTAATCGGGCTACTAAAATGCACCCCCACCCTGGAAAGAGGAGGGAGGCCCACCAGACGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR GCA 72 bp | GACAAACTGGAGGGAAGCTCTCTAGTACCCAGGCTGTaGCCGGGAACCTACTTTCTTCTTCCATGGTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DKLEGSSLVPRL*PGTYFLLPWCR Trigger: TCTGCACCATGGAAGAAGAAAGTAGGTTCCCGGGCACAGCCTGGGTACTAGAGAGCTTCCCTCCAGTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | AGATGTAAAAACACCCAACATGAGCCTACCCTGTCCTaGGCCTCTTCTCACTTCAGAGTGGGGCAGAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: RCKNTQHEPTLS*ASSHFRVGQRP Trigger: GGGTCTCTGCCCCACTCTGAAGTGAGAAGAGGCTCAGGACAGGGTAGGCTCATGTTGGGTGTTTTTACATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR GCA 72 bp | GTCTGGTGGGCCTCCCTCCTCTTTCCAGGGTGGGGGTaGATTTTAGTAGCCCGATTAACGAATTCTTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: VWWASLLFPGWG*ILVARLTNSLP Trigger: AGGTAAAGAATTCGTTAATCGGGCTACTAAAATGCACCCCCACCCTGGAAAGAGGAGGGAGGCCCACCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CCA 72 bp | GAACAGTGGCACGTGGGTAGGTGGGTAATCTTCCTTTaGAGGAATTCAAAGCTGGTGGACCTCAGAAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EQWHVGRWVIFL*RNSKLVDLRRK Trigger: CTTCCTTCTGAGGTCCACCAGCTTTGAATTCCTCCAAAGGAAGATTACCCACCTACCCACGTGCCACTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CCA 72 bp | ATCTCCATCACTTGGAAAAGTGCCATCACGGAACAGTaGCACGTGGGTAGGTGGGTAATCTTCCTTTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ISITWKSAITEQ*HVGRWVIFLWR Trigger: CCTCCAAAGGAAGATTACCCACCTACCCACGTGCCACTGTTCCGTGATGGCACTTTTCCAAGTGATGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR GCA 72 bp | TTACTGGGTGGTGCTGAGAGACTAATAGGAAATCAATaGTACTGGCCGGACAGAATGCATATGAGGGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLGGAERLIGNQ*YWPDRMHMRGP Trigger: TGGGCCCCTCATATGCATTCTGTCCGGCCAGTAGCATTGATTTCCTATTAGTCTCTCAGCACCACCCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CCA 72 bp | AAAAGTGCCATCACGGAACAGTGGCACGTGGGTAGGTaGGTAATCTTCCTTTGGAGGAATTCAAAGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KSAITEQWHVGR*VIFLWRNSKLV Trigger: CACCAGCTTTGAATTCCTCCAAAGGAAGATTACCCACCTACCCACGTGCCACTGTTCCGTGATGGCACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CCA 72 bp | ACAGGACCCTTTCCCCCAATCTCATCAACCTCAGCTTaGTTCCCATGGCTCTTATCTAGGAGAAATCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TGPFPPISSTSA*FPWLLSRRNLC Trigger: ACACAGATTTCTCCTAGATAAGAGCCATGGGAACCAAGCTGAGGTTGATGAGATTGGGGGAAAGGGTCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | TCTCTCTCCGCAATTCCATGGAACAGACAGGGAAACTaGGACATATTAAACAAGTCATGTGGGGGATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLSAIPWNRQGN*DILNKSCGGFR Trigger: CCTGAATCCCCCACATGACTTGTTTAATATGTCTCAGTTTCCCTGTCTGTTCCATGGAATTGCGGAGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTCAAAATGGACTTGTTTCAGAACCACACAATTTTAGGGCTCAGAGCTTACATCAGGTCAAAACCAGATaGAAAACTCTACCCAGACCG | + |
|
Preference number: 3 (lower is better) Translates to: AQNGLVSEPHNFRAQSLHQVKTR*KTLPRP Trigger: CGGTCTGGGTAGAGTTTTCAATCTGGTTTTGACCTG...ATGTAAGCTCTGAGCCCTAAAATTGTGTGGTTCTGAAACAAGTCCATTTTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR TCA 72 bp | CAGGTCAAAACCAGATTGAAAACTCTACCCAGACCGTaGGTCAAAGCAATAAACCACAAGCATGTGTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QVKTRLKTLPRP*VKAINHKHVLR Trigger: CCTTAACACATGCTTGTGGTTTATTGCTTTGACTCACGGTCTGGGTAGAGTTTTCAATCTGGTTTTGACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CAA 72 bp | GCTGACTGCATCTGCGGAGTGCCCTGCAGGCCTGCCTaGTCCCTTGCAGTCACGGCACACGCAGTGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ADCICGVPCRPA*SLAVTAHAVCP Trigger: TGGGCACACTGCGTGTGCCGTGACTGCAAGGGACAAGGCAGGCCTGCAGGGCACTCCGCAGATGCAGTCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR CCA 90 bp | CTCTACCCGGGGGCCCTGGCCAGGCTGACACCGTCTGGTGGGCCTCCCTCCTCTGATGCAGGTTCCTTCTaGGAAGATGAGGATGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYPGALARLTPSGGPPSSDAGSF*EDEDGQ Trigger: CTGCCCATCCTCATCTTCCCAGAAGGAACCTGCATC...AGAGGAGGGAGGCCCACCAGACGGTGTCAGCCTGGCCAGGGCCCCCGGGTAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGGTGAAAACTGTGACCTGCAATCCCAACTACCCAGCAGGTTTGGCCCCCCCATAAGGCCCCCGTaGACCTGTCCCACCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CLGENCDLQSQLPSRFGPPIRPP*TCPTMA Trigger: CGCCATGGTGGGACAGGTTCACGGGGGCCTTATGGG...GGGGCCAAACCTGCTGGGTAGTTGGGATTGCAGGTCACAGTTTTCACCCAGACA 60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR GCA 90 bp | CTCTACCCGGGGGCCCTGGCCAGGCTGACACCGTCTGGTGGGCCTCCCTCCTCTTTGCTATATAGCTTCTaGTGCTCCTCCTTGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYPGALARLTPSGGPPSSLLYSF*CSSLNV Trigger: CACATTCAAGGAGGAGCAGCAGAAGCTATATAGCAA...AGAGGAGGGAGGCCCACCAGACGGTGTCAGCCTGGCCAGGGCCCCCGGGTAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGGGTGCGGTGAGAGACGGATGGCTGGATGGTCATCTCTTAGCCTGTCCTCTACCAATCCTCCCTaGCGGGCAATGGCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSGCGERRMAGWSSLSLSSTNPP*RAMADF Trigger: GAAGTCTGCCATTGCCCGGCAGGGAGGATTGGTAGA...GGACAGGCTAAGAGATGACCATCCAGCCATCCGTCTCTCACCGCACCCACTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR CCA 90 bp | CACCTCTGCGCCATCCTTGCCCCCACTACTCGCTGTTCTCCACCACGCTTGAACGGCTTGTACAGCTGGTaGTTCCTCTCCTTGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLCAILAPTTRCSPPRLNGLYSW*FLSLAP Trigger: AGGAGCCAAGGAGAGGAACCACCAGCTGTACAAGCC...GTTCAAGCGTGGTGGAGAACAGCGAGTAGTGGGGGCAAGGATGGCGCAGAGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGGGTGCGGTGAGAGACGGATGGCTGGATGGTCATCTCTTAGCCTGTCCCCATGCCATACTTGCTaGTGTTCCAGAAGGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSGCGERRMAGWSSLSLSPCHTC*CSRRRH Trigger: GTGACGCCTTCTGGAACAGCAGCAAGTATGGCATGG...GGACAGGCTAAGAGATGACCATCCAGCCATCCGTCTCTCACCGCACCCACTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR TCA 90 bp | ACTCACCAGTTCTTCCCAGCACCTCTGCGCCATCCTTGCCCCCACTACTCGCTGTGGGATCTTTTGCAATaGTTCCGTTGGTGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: THQFFPAPLRHPCPHYSLWDLLQ*FRWCRA Trigger: AGCCCTACACCAACGGAATCATTGCAAAAGATCCCA...CAGCGAGTAGTGGGGGCAAGGATGGCGCAGAGGTGCTGGGAAGAACTGGTGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTGGGTGAAAACTGTGACCTGCAATCCCAACTACCCAGCAGGTTTGGCCCCGCAGGTACCAAACGCTaGAGACAATGGCCCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLGENCDLQSQLPSRFGPAGTKR*RQWPNW Trigger: CCAGTTGGGCCATTGTCTGCAGCGTTTGGTACCTGC...GGGGCCAAACCTGCTGGGTAGTTGGGATTGCAGGTCACAGTTTTCACCCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGGGTGCGGTGAGAGACGGATGGCTGGATGGTCATCTCTTAGCCTGTCCAGCTTGCTTTTATCCTaGACATGCTCAGTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSGCGERRMAGWSSLSLSSLLLS*TCSVSL Trigger: GAGGCTGACTGAGCATGTCCAGGATAAAAGCAAGCT...GGACAGGCTAAGAGATGACCATCCAGCCATCCGTCTCTCACCGCACCCACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR TCA 90 bp | GAATTCAAAGCTGGTGGACCTCAGAAGGAAGGACAGAAGGCTGACTGCATCTGCAAACAAGCAGCAGGGTaGAGAGGACGGTCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EFKAGGPQKEGQKADCICKQAAG*RGRSGR Trigger: TCTCCCTGACCGTCCTCTTCACCCTGCTGCTTGTTT...GCAGATGCAGTCAGCCTTCTGTCCTTCCTTCTGAGGTCCACCAGCTTTGAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCACCTCTGCGCCATCCTTGCCCCCACTACTCGCTGTTCTCCACCACGCTTCGACGAATTTCTTTaGTTTCTTCTTCCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQHLCAILAPTTRCSPPRFDEFL*FLLPEK Trigger: CTTCTCTGGAAGAAGAAATCAAAGAAATTCGTCGAA...GCGTGGTGGAGAACAGCGAGTAGTGGGGGCAAGGATGGCGCAGAGGTGCTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR TCA 90 bp | GAATTCAAAGCTGGTGGACCTCAGAAGGAAGGACAGAAGGCTGACTGCATCTGCATGCCAGCGCAATCCTaGGTGGCAGGAGGAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: EFKAGGPQKEGQKADCICMPAQS*VAGGSN Trigger: ATTGCTTCCTCCTGCCACTCAGGATTGCGCTGGCAT...GCAGATGCAGTCAGCCTTCTGTCCTTCCTTCTGAGGTCCACCAGCTTTGAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR GCA 90 bp | ATGGACCCTGAGACTGTCCTCAGGCCTCCACACCCGCCACACCCACACACACATTTCCGACTATCATCTTaGTATATAGCTTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MDPETVLRPPHPPHPHTHFRLSS*YIASAA Trigger: AGCAGCAGAAGCTATATAGCAAGATGATAGTCGGAA...ATGTGTGTGTGGGTGTGGCGGGTGTGGAGGCCTGAGGACAGTCTCAGGGTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTGGGTGAAAACTGTGACCTGCAATCCCAACTACCCAGCAGGTTTGGCCCCAGACAATGGCCCAACTaGTCATCATCCTCAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLGENCDLQSQLPSRFGPRQWPN*SSSSEG Trigger: ACCTTCTGAGGATGATGACCAGTTGGGCCATTGTCT...GGGGCCAAACCTGCTGGGTAGTTGGGATTGCAGGTCACAGTTTTCACCCAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR CCA 90 bp | CATGTCTGGGTGAAAACTGTGACCTGCAATCCCAACTACCCAGCAGGTTTGGCCTCTCCATTCTCAGGGTaGCCCACGCAAAGATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HVWVKTVTCNPNYPAGLASPFSG*PTQRSL Trigger: TAAAGATCTTTGCGTGGGCCACCCTGAGAATGGAGA...GGCCAAACCTGCTGGGTAGTTGGGATTGCAGGTCACAGTTTTCACCCAGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR CCA 90 bp | GCGCTTGCACTGCAAGCATGGAGACCCGAGTTCCAGCCCCTAGGAAGGTGGATTCTTAAATCTCCCATTTaGCAGGTATCCAACCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALALQAWRPEFQPLGRWILKSPI*QVSNHS Trigger: ACTATGGTTGGATACCTGCCAAATGGGAGATTTAAG...AATCCACCTTCCTAGGGGCTGGAACTCGGGTCTCCATGCTTGCAGTGCAAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CAA 72 bp | CACAAGGCACTTGTCAGTTCAAGATCTAAAAGCCCCTaGCTGTTGTCCTGGCCCACCATCCCTCAAACCGTA | + |
|
Preference number: 4 (lower is better) Translates to: HKALVSSRSKSP*LLSWPTIPQTV Trigger: TACGGTTTGAGGGATGGTGGGCCAGGACAACAGCAAGGGGCTTTTAGATCTTGAACTGACAAGTGCCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR TCA 90 bp | GCTTACTATAAGAACAAGAGGCATTTTGTCCCAGGGAGCCCCAGCCAGAAGCATTTCACCATTGCTCTCTaGATCACACCCATAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AYYKNKRHFVPGSPSQKHFTIAL*ITPIRP Trigger: GGGCCTTATGGGTGTGATTCAGAGAGCAATGGTGAA...ATGCTTCTGGCTGGGGCTCCCTGGGACAAAATGCCTCTTGTTCTTATAGTAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR CCA 90 bp | GCTTACTATAAGAACAAGAGGCATTTTGTCCCAGGGAGCCCCAGCCAGAAGCATCTCTTAGCCACCAGGTaGCGATCTTTCACCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AYYKNKRHFVPGSPSQKHLLATR*RSFTSE Trigger: TTCTGAGGTGAAAGATCGCCACCTGGTGGCTAAGAG...ATGCTTCTGGCTGGGGCTCCCTGGGACAAAATGCCTCTTGTTCTTATAGTAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| 3UTR CAA 72 bp | GGGACACCTGACCCTAGACAATTTCAAGGGACAGCATaGAAACACTACGGACATTCTACACAAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTPDPRQFQGTA*KHYGHSTQAAA Trigger: GGCTGCTGCTTGTGTAGAATGTCCGTAGTGTTTCAATGCTGTCCCTTGAAATTGTCTAGGGTCAGGTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
||
| CDS-3UTR TCA 90 bp | CATGTCTGGGTGAAAACTGTGACCTGCAATCCCAACTACCCAGCAGGTTTGGCCAGATACCCAGGAGGTTaGCAATCAAGCTATCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: HVWVKTVTCNPNYPAGLARYPGG*QSSYQK Trigger: CTTTTGATAGCTTGATTGTCAACCTCCTGGGTATCT...GGCCAAACCTGCTGGGTAGTTGGGATTGCAGGTCACAGTTTTCACCCAGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS-3UTR TCA 90 bp | AGGTGGGTAATCTTCCTTTGGAGGAATTCAAAGCTGGTGGACCTCAGAAGGAAGCAAAGCTTCCCTTCTTaGACATCATCACTGATGTGT | + |
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Preference number: 4 (lower is better) Translates to: RWVIFLWRNSKLVDLRRKQSFPS*TSSLMC Trigger: ACACATCAGTGATGATGTTCAAGAAGGGAAGCTTTG...CTTCCTTCTGAGGTCCACCAGCTTTGAATTCCTCCAAAGGAAGATTACCCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS-3UTR GCA 90 bp | CAAAGCAATAAACCACAAGCATGTGTTAAGGGACACCTGACCCTAGACAATTTCGCAGGCTTTCACCATTaGTCTCTGAATCACACCCAT | + |
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Preference number: 4 (lower is better) Translates to: QSNKPQACVKGHLTLDNFAGFHH*SLNHTH Trigger: ATGGGTGTGATTCAGAGAGCAATGGTGAAAGCCTGC...GAAATTGTCTAGGGTCAGGTGTCCCTTAACACATGCTTGTGGTTTATTGCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS-3UTR CCA 90 bp | TTTTTAAGCATTTGCAAAATAGTTCCCAAGAGGCTGTTCTTAAGAGTCAGAGGTCAGCGCAATCCTGAGTaGCAGGAGGAAGCAATACCG | + |
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Preference number: 4 (lower is better) Translates to: FLSICKIVPKRLFLRVRGQRNPE*QEEAIP Trigger: CGGTATTGCTTCCTCCTGCCACTCAGGATTGCGCTG...ACCTCTGACTCTTAAGAACAGCCTCTTGGGAACTATTTTGCAAATGCTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS-3UTR CCA 90 bp | TTTTTAAGCATTTGCAAAATAGTTCCCAAGAGGCTGTTCTTAAGAGTCAGAGGTCGCTCAAACCAGACATaGGGGCAGGCTTTCACCATT | + |
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Preference number: 4 (lower is better) Translates to: FLSICKIVPKRLFLRVRGRSNQT*GQAFTI Trigger: AATGGTGAAAGCCTGCCCCCATGTCTGGTTTGAGCG...ACCTCTGACTCTTAAGAACAGCCTCTTGGGAACTATTTTGCAAATGCTTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS-3UTR CCA 90 bp | GTTAACCGGCAAGAAATACATTTCTCAGGAATGAAGGCAAAGTCCCTAAATTCATCAATGGGGGATGTATaGTTAGCCACACAGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: VNRQEIHFSGMKAKSLNSSMGDV*LATQMP Trigger: TGGCATCTGTGTGGCTAACCATACATCCCCCATTGA...TGAATTTAGGGACTTTGCCTTCATTCCTGAGAAATGTATTTCTTGCCGGTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS-3UTR GCA 90 bp | GCTCAAAATGGACTTGTTTCAGAACCACACAATTTTAGGGCTCAGAGCTTACATAGAAGTGGGATCTTTTaGAATGATTCCGTTGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: AQNGLVSEPHNFRAQSLHRSGIF*NDSVGV Trigger: TACACCAACGGAATCATTGCAAAAGATCCCACTTCT...ATGTAAGCTCTGAGCCCTAAAATTGTGTGGTTCTGAAACAAGTCCATTTTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS GCA 90 bp | TCCAACCATAGTAGTTCCCACTACCAAGAGGCCAATCCCCGTGAATaGCAGCGCAATCCTGAGTGGCAGGAGGAAGCAATACCGAATCAG | + |
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Preference number: 5 (lower is better) Translates to: SNHSSSHYQEANPRE*QRNPEWQEEAIPNQ Trigger: CTGATTCGGTATTGCTTCCTCCTGCCACTCAGGATTGCGCTGGCATTCACGGGGATTGGCCTCTTGGTAGTGGGAACTACTATGGTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167004.3 ENSMUST00000209507.2 |
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| CDS-3UTR CAA 90 bp | CCTCTTCTCACTTCAGAGTGGGGCAGAGACCCAGCCATCCAGTCATTTTCCAGTGAGATACCCAGGAGGTaGACAATCAAGCTATCAAAA | + |
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Preference number: 5 (lower is better) Translates to: PLLTSEWGRDPAIQSFSSEIPRR*TIKLSK Trigger: TTTTGATAGCTTGATTGTCAACCTCCTGGGTATCTC...ACTGGAAAATGACTGGATGGCTGGGTCTCTGCCCCACTCTGAAGTGAGAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS-3UTR CAA 90 bp | GACGGTAGAGGCTGTGGCAGCAACAACTGCAGCTGGCTCACACTTCAGGATTTACCGCAGGCTTATGTATaGGAAGTTGTAATTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: DGRGCGSNNCSWLTLQDLPQAYV*EVVIGS Trigger: AGAACCAATTACAACTTCCAATACATAAGCCTGCGG...TAAATCCTGAAGTGTGAGCCAGCTGCAGTTGTTGCTGCCACAGCCTCTACCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS-3UTR CAA 90 bp | AGGTGGGTAATCTTCCTTTGGAGGAATTCAAAGCTGGTGGACCTCAGAAGGAAGCTTCGACGAATTTCTTaGATTTCTTCTTCCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: RWVIFLWRNSKLVDLRRKLRRIS*ISSSRE Trigger: TTCTCTGGAAGAAGAAATCAAAGAAATTCGTCGAAG...CTTCCTTCTGAGGTCCACCAGCTTTGAATTCCTCCAAAGGAAGATTACCCACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS CAA 72 bp | GACCGGCTGCGGTCCTCATGGTTTCCGACTATCATCTaGCTATATAGCTTCTGCTGCTCCTCCTTGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: DRLRSSWFPTII*LYSFCCSSLNV Trigger: CACATTCAAGGAGGAGCAGCAGAAGCTATATAGCAAGATGATAGTCGGAAACCATGAGGACCGCAGCCGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167004.3 |
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| CDS CCA 72 bp | AACGTGTTTACTCAAAAACTCCTTAAATCTCCCATTTaGCAGGTATCCAACCATAGTAGTTCCCACTACCAA | + |
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Preference number: 6 (lower is better) Translates to: NVFTQKLLKSPI*QVSNHSSSHYQ Trigger: TTGGTAGTGGGAACTACTATGGTTGGATACCTGCCAAATGGGAGATTTAAGGAGTTTTTGAGTAAACACGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167004.3 ENSMUST00000209507.2 |
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