Pregenerated sensors for GPAT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029314Ensembl transcript IDs: ENSMUST00000031255.15, ENSMUST00000092990.4, ENSMUST00000112887.8
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGCAAGCTCCGCATAGCTCACACTTGTATCCTGCAGAAAGTGTaGTTCTTTTGTTTTAAAGGCTCCTTCCCTTGGACAATTTCATTT | + |
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Preference number: 1 (lower is better) Translates to: GGKLRIAHTCILQKV*FFCFKGSFPWTISF Trigger: AAATGAAATTGTCCAAGGGAAGGAGCCTTTAAAACAAAAGAACCACACTTTCTGCAGGATACAAGTGTGAGCTATGCGGAGCTTGCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTAATCCTAGCACGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTTCTGAAGGCCAGTTCTaGGAAGCCATGTTTATCCAC | + |
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Preference number: 2 (lower is better) Translates to: PVILARGKWSQNSQFLASSEGQF*EAMFIH Trigger: GTGGATAAACATGGCTTCGCAGAACTGGCCTTCAGA...ACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACGTGCTAGGATTACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR-3UTR CCA 90 bp | TTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCCTAGCACGTGGTGCAGGTTCAGCTTCTaGCATGAGGATAGAGACAAA | + |
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Preference number: 2 (lower is better) Translates to: LLKSHLGVEAPACNPSTWCRFSF*HEDRDK Trigger: TTTGTCTCTATCCTCATGCCAGAAGCTGAACCTGCA...CCACGTGCTAGGATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR-3UTR TCA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATATCATCTTTCACTTCTaGAGGCCAGTTCTGCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SPGMLLKSHLGVEAPACNIIFHF*RPVLRS Trigger: GCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGAT...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTCTTGGCTACAAAGTGTGCAGGTTCAGCTTCTaGCATGAGGATAGAGACAAA | + |
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Preference number: 2 (lower is better) Translates to: RGKWSQNSQFLASLGYKVCRFSF*HEDRDK Trigger: TTTGTCTCTATCCTCATGCCAGAAGCTGAACCTGCA...CACTTTGTAGCCAAGACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR-3UTR CCA 90 bp | TTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCCTAGCACGTGGGTTCTTAGCCAGTCTTaGCTACAAAGTGAGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: LLKSHLGVEAPACNPSTWVLSQS*LQSEFE Trigger: CTCAAACTCACTTTGTAGCCAAGACTGGCTAAGAAC...CCACGTGCTAGGATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR-3UTR TCA 90 bp | TCAACATCATCATTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATATCATCTTTCACTTCTaGAGGCCAGTTCTGCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: STSSFYKSLFPLKNGPYNIIFHF*RPVLRS Trigger: GCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGAT...ATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAATGATGATGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR CCA 72 bp | TGGAAGCACCTGCCTGTAATCCTAGCACGTGGGAAGTaGAGCCAGAATAGTCAGTTCTTAGCCAGTCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: WKHLPVILARGK*SQNSQFLASLG Trigger: GCCAAGACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACGTGCTAGGATTACAGGCAGGTGCTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR CCA 72 bp | CATAATGGAAATGCACTATGGTGTGATGACCTCACCTaGTATGTTACTGAAGTCACACCTAGGTGTGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: HNGNALWCDDLT*YVTEVTPRCGS Trigger: GCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGAGGTCATCACACCATAGTGCATTTCCATTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR-3UTR CAA 90 bp | AAATCTTTAGCATACAAACAAGAAAAGCTAACAGTGCTTTCTCCACTGCAGCTGCAAAAAGGACACCTGTaGCAGGTTCAGCTTCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: KSLAYKQEKLTVLSPLQLQKGHL*QVQLLA Trigger: TGCCAGAAGCTGAACCTGCAACAGGTGTCCTTTTTG...CAGCTGCAGTGGAGAAAGCACTGTTAGCTTTTCTTGTTTGTATGCTAAAGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAACAAAAAGGACACCTGTaGCAGGTTCAGCTTCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQQKGHL*QVQLLA Trigger: TGCCAGAAGCTGAACCTGCAACAGGTGTCCTTTTTG...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR TCA 72 bp | GTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTaGGCCAACACAAGAACGAAAACATCAAAAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: VCFHSRTGLTIP*ANTRTKTSKRT Trigger: TGTCCTTTTTGATGTTTTCGTTCTTGTGTTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR GCA 72 bp | CAACACAAGAACGAAAACATCAAAAAGGACACCTGTTaGAGGTTCAGCTTCTGGCATGAGGATAGAGACAAA | + |
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Preference number: 3 (lower is better) Translates to: QHKNENIKKDTC*RFSFWHEDRDK Trigger: TTTGTCTCTATCCTCATGCCAGAAGCTGAACCTGCAACAGGTGTCCTTTTTGATGTTTTCGTTCTTGTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| 3UTR TCA 72 bp | ACAACACAACAAAACAACATCATCATCTTTCACTTCTaGAGGCCAGTTCTGCGAAGCCATGTTTATCCACGA | + |
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Preference number: 3 (lower is better) Translates to: TTQQNNIIIFHF*RPVLRSHVYPR Trigger: TCGTGGATAAACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | CCTGTAATCCTAGCACGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTCCAGCGTCAGCCAGGTaGACAGGAGCTTCACCGCCA | + |
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Preference number: 4 (lower is better) Translates to: PVILARGKWSQNSQFLASPASAR*TGASPP Trigger: TGGCGGTGAAGCTCCTGTCCACCTGGCTGACGCTGG...ACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACGTGCTAGGATTACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | CGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTCTTGGCTACAAAGTGCCAGCGTCAGCCAGGTaGACAGGAGCTTCACCGCCA | + |
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Preference number: 4 (lower is better) Translates to: RGKWSQNSQFLASLGYKVPASAR*TGASPP Trigger: TGGCGGTGAAGCTCCTGTCCACCTGGCTGACGCTGG...CACTTTGTAGCCAAGACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR GCA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCTGCAGCAGGTCAGATaGACCAGCTCACTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SPGMLLKSHLGVEAPACNLQQVR*TSSLSQ Trigger: CTGGCTGAGTGAGCTGGTGCATCTGACCTGCTGCAG...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR GCA 90 bp | TTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCCTAGCACGTGGGGTTGGGAGATCCGTTaGCCACGATCATCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LLKSHLGVEAPACNPSTWGWEIR*PRSSCC Trigger: ACAGCAAGATGATCGTGGGCAACGGATCTCCCAACC...CCACGTGCTAGGATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | TTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCCTAGCACGTGGTCGGAGGAGAACCTCTaGGTCACTTCATCCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: LLKSHLGVEAPACNPSTWSEENL*VTSSST Trigger: TGTGGAGGATGAAGTGACCCAGAGGTTCTCCTCCGA...CCACGTGCTAGGATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | CGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTCTTGGCTACAAAGTGTTTGAGGCTGCTGTCTaGAAGCTGGCCAACCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: RGKWSQNSQFLASLGYKVFEAAV*KLANQC Trigger: ACACTGGTTGGCCAGCTTCCAGACAGCAGCCTCAAA...CACTTTGTAGCCAAGACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | CCTGTAATCCTAGCACGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTTTTGAGGCTGCTGTCTaGAAGCTGGCCAACCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: PVILARGKWSQNSQFLASFEAAV*KLANQC Trigger: ACACTGGTTGGCCAGCTTCCAGACAGCAGCCTCAAA...ACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACGTGCTAGGATTACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR GCA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATGGTGTCCTTCACCTTTaGTCTCTTCAGCCCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: SPGMLLKSHLGVEAPACNGVLHL*SLQPSI Trigger: GATGGAGGGCTGAAGAGAGCAAAGGTGAAGGACACC...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR GCA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATGGTTGGGAGATCCGTTaGCCACGATCATCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SPGMLLKSHLGVEAPACNGWEIR*PRSSCC Trigger: ACAGCAAGATGATCGTGGGCAACGGATCTCCCAACC...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | CCTGTAATCCTAGCACGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTCTTCATCCTCCACAATaGCTTCCAACCCCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PVILARGKWSQNSQFLASLHPPQ*LPTPSW Trigger: CCAAGAAGGGGTTGGAAGCCATTGTGGAGGATGAAG...ACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACGTGCTAGGATTACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATTCGGAGGAGAACCTCTaGGTCACTTCATCCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: SPGMLLKSHLGVEAPACNSEENL*VTSSST Trigger: TGTGGAGGATGAAGTGACCCAGAGGTTCTCCTCCGA...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCTGCTGTCTGGAAGCTaGCCAACCAGTGTAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SPGMLLKSHLGVEAPACNLLSGS*PTSVVP Trigger: AGGAACTACACTGGTTGGCCAGCTTCCAGACAGCAG...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | TTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCCTAGCACGTGGCAGATACCTCCCTTCTaGGGTCTGTACTGCTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: LLKSHLGVEAPACNPSTWQIPPF*GLYCLL Trigger: TAACAAGCAGTACAGACCCCAGAAGGGAGGTATCTG...CCACGTGCTAGGATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | TTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCCTAGCACGTGGGGATTAGGACATCAATaGGAGAGGTGTGATTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LLKSHLGVEAPACNPSTWGLGHQ*ERCDWR Trigger: TCGCCAATCACACCTCTCCCATTGATGTCCTAATCC...CCACGTGCTAGGATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR TCA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATTCAATGGGAGAGGTGTaGTTGGCGACACAGATACCT | + |
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Preference number: 4 (lower is better) Translates to: SPGMLLKSHLGVEAPACNSMGEV*LATQIP Trigger: AGGTATCTGTGTCGCCAATCACACCTCTCCCATTGA...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR TCA 90 bp | CGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTCTTGGCTACAAAGTGCCCTTTCTCCATGGGTaGCTCATCTCTTTGGATAAT | + |
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Preference number: 4 (lower is better) Translates to: RGKWSQNSQFLASLGYKVPFLHG*LISLDN Trigger: ATTATCCAAAGAGATGAGTCACCCATGGAGAAAGGG...CACTTTGTAGCCAAGACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR TCA 90 bp | TTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCCTAGCACGTGGCTTGGACTGATGTACTaGAAGTTGACATTGGTTCGT | + |
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Preference number: 4 (lower is better) Translates to: LLKSHLGVEAPACNPSTWLGLMY*KLTLVR Trigger: ACGAACCAATGTCAACTTTCAGTACATCAGTCCAAG...CCACGTGCTAGGATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR GCA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAACTGCAGCAGGTCAGATaGACCAGCTCACTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QHNKTTSSSFTSEGQFCELQQVR*TSSLSQ Trigger: CTGGCTGAGTGAGCTGGTGCATCTGACCTGCTGCAG...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR GCA 90 bp | CCTGTAATCCTAGCACGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTGTTTGCAAACTGAACTaGGTCTTCTCCTTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PVILARGKWSQNSQFLASVCKLN*VFSFLS Trigger: AGAGAGGAAGGAGAAGACGCAGTTCAGTTTGCAAAC...ACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACGTGCTAGGATTACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | TTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCCTAGCACGTGGCTTCCAACCCCTTCTTaGAGAAATAGAACACATCAG | + |
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Preference number: 4 (lower is better) Translates to: LLKSHLGVEAPACNPSTWLPTPS*RNRTHQ Trigger: CTGATGTGTTCTATTTCTCCAAGAAGGGGTTGGAAG...CCACGTGCTAGGATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR TCA 90 bp | ACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCCATGTTTGGGGGCTCCTTTCTaGATTCGTAATGTGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: TKQHHHLSLLKASSAKPCLGAPF*IRNVAH Trigger: GTGGGCCACATTACGAATTCAGAAAGGAGCCCCCAA...ACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR GCA 90 bp | ACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCCATGTGGTGTCCTTCACCTTTaGTCTCTTCAGCCCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: TKQHHHLSLLKASSAKPCGVLHL*SLQPSI Trigger: GATGGAGGGCTGAAGAGAGCAAAGGTGAAGGACACC...ACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATTGTTATGGTAATGGATaGTGCCAGATAGGGACCGAA | + |
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Preference number: 4 (lower is better) Translates to: SPGMLLKSHLGVEAPACNCYGNG*CQIGTE Trigger: TTCGGTCCCTATCTGGCACCATCCATTACCATAACA...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR TCA 90 bp | ACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCCATGTTCAATGGGAGAGGTGTaGTTGGCGACACAGATACCT | + |
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Preference number: 4 (lower is better) Translates to: TKQHHHLSLLKASSAKPCSMGEV*LATQIP Trigger: AGGTATCTGTGTCGCCAATCACACCTCTCCCATTGA...ACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | AACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGTCGGAGGAGAACCTCTaGGTCACTTCATCCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: NTTKQHHHLSLLKASSAKSEENL*VTSSST Trigger: TGTGGAGGATGAAGTGACCCAGAGGTTCTCCTCCGA...CTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CCA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAACTGCTGTCTGGAAGCTaGCCAACCAGTGTAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QHNKTTSSSFTSEGQFCELLSGS*PTSVVP Trigger: AGGAACTACACTGGTTGGCCAGCTTCCAGACAGCAG...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR TCA 90 bp | AAATCTTTAGCATACAAACAAGAAAAGCTAACAGTGCTTTCTCCACTGCAGCTGCACTCAGCCAGTTTTTaGGGCTGCTGTCTGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: KSLAYKQEKLTVLSPLQLHSASF*GCCLEA Trigger: AGCTTCCAGACAGCAGCCTCAAAAACTGGCTGAGTG...CAGCTGCAGTGGAGAAAGCACTGTTAGCTTTTCTTGTTTGTATGCTAAAGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR TCA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAACCATGGCTCTCTGAATaGTCCCCATCAATCCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQPWLSE*SPSIHR Trigger: ACGGTGGATTGATGGGGATCATTCAGAGAGCCATGG...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR GCA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATTGCCCACGATCATCTTaGTGTAATTCTTCTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGMLLKSHLGVEAPACNCPRSS*CNSSVV Trigger: AACAACAGAAGAATTACAGCAAGATGATCGTGGGCA...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAACTGCTGTCTGGAAGCTaGCCAACCAGTGTAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQLLSGS*PTSVVP Trigger: AGGAACTACACTGGTTGGCCAGCTTCCAGACAGCAG...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | AAATCTTTAGCATACAAACAAGAAAAGCTAACAGTGCTTTCTCCACTGCAGCTGTTTGAGGCTGCTGTCTaGAAGCTGGCCAACCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSLAYKQEKLTVLSPLQLFEAAV*KLANQC Trigger: ACACTGGTTGGCCAGCTTCCAGACAGCAGCCTCAAA...CAGCTGCAGTGGAGAAAGCACTGTTAGCTTTTCTTGTTTGTATGCTAAAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCCATGTCAGATACCTCCCTTCTaGGGTCTGTACTGCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TKQHHHLSLLKASSAKPCQIPPF*GLYCLL Trigger: TAACAAGCAGTACAGACCCCAGAAGGGAGGTATCTG...ACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCCATGTGGATTAGGACATCAATaGGAGAGGTGTGATTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TKQHHHLSLLKASSAKPCGLGHQ*ERCDWR Trigger: TCGCCAATCACACCTCTCCCATTGATGTCCTAATCC...ACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCCATGTCGTAACATCCATCGGTaGCCAGGATTAGGACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: TKQHHHLSLLKASSAKPCRNIHR*PGLGHQ Trigger: TTGATGTCCTAATCCTGGCCACCGATGGATGTTACG...ACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR TCA 90 bp | AAATCTTTAGCATACAAACAAGAAAAGCTAACAGTGCTTTCTCCACTGCAGCTGTCAATGGGAGAGGTGTaGTTGGCGACACAGATACCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLAYKQEKLTVLSPLQLSMGEV*LATQIP Trigger: AGGTATCTGTGTCGCCAATCACACCTCTCCCATTGA...CAGCTGCAGTGGAGAAAGCACTGTTAGCTTTTCTTGTTTGTATGCTAAAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | AACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGAGAGCCCTTTCTCCATaGGTGACTCATCTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTTKQHHHLSLLKASSAKRALSP*VTHLFG Trigger: TCCAAAGAGATGAGTCACCCATGGAGAAAGGGCTCT...CTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAACTTCATCCTCCACAATaGCTTCCAACCCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQLHPPQ*LPTPSW Trigger: CCAAGAAGGGGTTGGAAGCCATTGTGGAGGATGAAG...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCCATGTTGTTATGGTAATGGATaGTGCCAGATAGGGACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKQHHHLSLLKASSAKPCCYGNG*CQIGTE Trigger: TTCGGTCCCTATCTGGCACCATCCATTACCATAACA...ACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| 3UTR CAA 72 bp | AGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTaGAGCCAACACAAGAACGAAAACATCAAAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLFPLKNGPYNS*SQHKNENIKKD Trigger: GTCCTTTTTGATGTTTTCGTTCTTGTGTTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR TCA 90 bp | TCAACATCATCATTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTTGGGGGCTCCTTTCTaGATTCGTAATGTGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: STSSFYKSLFPLKNGPYNLGAPF*IRNVAH Trigger: GTGGGCCACATTACGAATTCAGAAAGGAGCCCCCAA...ATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAATGATGATGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR TCA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAACCCTTTCTCCATGGGTaGCTCATCTCTTTGGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: QHNKTTSSSFTSEGQFCEPFLHG*LISLDN Trigger: ATTATCCAAAGAGATGAGTCACCCATGGAGAAAGGG...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR TCA 90 bp | TCAACATCATCATTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATCACTCAGCCAGTTTTTaGGGCTGCTGTCTGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: STSSFYKSLFPLKNGPYNHSASF*GCCLEA Trigger: AGCTTCCAGACAGCAGCCTCAAAAACTGGCTGAGTG...ATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAATGATGATGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR TCA 90 bp | TCAACATCATCATTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATCCATGGCTCTCTGAATaGTCCCCATCAATCCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: STSSFYKSLFPLKNGPYNPWLSE*SPSIHR Trigger: ACGGTGGATTGATGGGGATCATTCAGAGAGCCATGG...ATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAATGATGATGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR TCA 90 bp | AACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGTCTGTTGTTCTTCCTTaGAGGTGTCCTTCACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NTTKQHHHLSLLKASSAKSVVLP*RCPSPL Trigger: CAAAGGTGAAGGACACCTTCAAGGAAGAACAACAGA...CTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR TCA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAATCTGTTGTTCTTCCTTaGAGGTGTCCTTCACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QHNKTTSSSFTSEGQFCESVVLP*RCPSPL Trigger: CAAAGGTGAAGGACACCTTCAAGGAAGAACAACAGA...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR GCA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGTTTGCAAACTGAACTaGGTCTTCTCCTTCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHNKTTSSSFTSEGQFCEVCKLN*VFSFLS Trigger: AGAGAGGAAGGAGAAGACGCAGTTCAGTTTGCAAAC...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAAAGAGCCCTTTCTCCATaGGTGACTCATCTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQRALSP*VTHLFG Trigger: TCCAAAGAGATGAGTCACCCATGGAGAAAGGGCTCT...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | AAATCTTTAGCATACAAACAAGAAAAGCTAACAGTGCTTTCTCCACTGCAGCTGAGAGCCCTTTCTCCATaGGTGACTCATCTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSLAYKQEKLTVLSPLQLRALSP*VTHLFG Trigger: TCCAAAGAGATGAGTCACCCATGGAGAAAGGGCTCT...CAGCTGCAGTGGAGAAAGCACTGTTAGCTTTTCTTGTTTGTATGCTAAAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | AACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGTGTTATGGTAATGGATaGTGCCAGATAGGGACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTTKQHHHLSLLKASSAKCYGNG*CQIGTE Trigger: TTCGGTCCCTATCTGGCACCATCCATTACCATAACA...CTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAACAGATACCTCCCTTCTaGGGTCTGTACTGCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQQIPPF*GLYCLL Trigger: TAACAAGCAGTACAGACCCCAGAAGGGAGGTATCTG...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAAGGATTAGGACATCAATaGGAGAGGTGTGATTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQGLGHQ*ERCDWR Trigger: TCGCCAATCACACCTCTCCCATTGATGTCCTAATCC...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | AAATCTTTAGCATACAAACAAGAAAAGCTAACAGTGCTTTCTCCACTGCAGCTGCGTAACATCCATCGGTaGCCAGGATTAGGACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSLAYKQEKLTVLSPLQLRNIHR*PGLGHQ Trigger: TTGATGTCCTAATCCTGGCCACCGATGGATGTTACG...CAGCTGCAGTGGAGAAAGCACTGTTAGCTTTTCTTGTTTGTATGCTAAAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCCATGTATACTTTATGGCCACTaGATAGATGGTTCCTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKQHHHLSLLKASSAKPCILYGH*IDGSSD Trigger: ATCGGAGGAACCATCTATCCAGTGGCCATAAAGTAT...ACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR TCA 90 bp | AAATCTTTAGCATACAAACAAGAAAAGCTAACAGTGCTTTCTCCACTGCAGCTGCCCTTTCTCCATGGGTaGCTCATCTCTTTGGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSLAYKQEKLTVLSPLQLPFLHG*LISLDN Trigger: ATTATCCAAAGAGATGAGTCACCCATGGAGAAAGGG...CAGCTGCAGTGGAGAAAGCACTGTTAGCTTTTCTTGTTTGTATGCTAAAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR TCA 90 bp | AAATCTTTAGCATACAAACAAGAAAAGCTAACAGTGCTTTCTCCACTGCAGCTGTCTGTTGTTCTTCCTTaGAGGTGTCCTTCACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLAYKQEKLTVLSPLQLSVVLP*RCPSPL Trigger: CAAAGGTGAAGGACACCTTCAAGGAAGAACAACAGA...CAGCTGCAGTGGAGAAAGCACTGTTAGCTTTTCTTGTTTGTATGCTAAAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR GCA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAAGTTTGCAAACTGAACTaGGTCTTCTCCTTCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQVCKLN*VFSFLS Trigger: AGAGAGGAAGGAGAAGACGCAGTTCAGTTTGCAAAC...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | AACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCTTCCAACCCCTTCTTaGAGAAATAGAACACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTTKQHHHLSLLKASSAKLPTPS*RNRTHQ Trigger: CTGATGTGTTCTATTTCTCCAAGAAGGGGTTGGAAG...CTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAATACTTTATGGCCACTaGATAGATGGTTCCTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QHNKTTSSSFTSEGQFCEILYGH*IDGSSD Trigger: ATCGGAGGAACCATCTATCCAGTGGCCATAAAGTAT...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR TCA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAACTTGGACTGATGTACTaGAAGTTGACATTGGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQLGLMY*KLTLVR Trigger: ACGAACCAATGTCAACTTTCAGTACATCAGTCCAAG...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAACTTCCAACCCCTTCTTaGAGAAATAGAACACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQLPTPS*RNRTHQ Trigger: CTGATGTGTTCTATTTCTCCAAGAAGGGGTTGGAAG...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTCCTTGAGCCAAATACTTTATGGCCACTaGATAGATGGTTCCTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FYKSLFPLKNGPYNSLSQILYGH*IDGSSD Trigger: ATCGGAGGAACCATCTATCCAGTGGCCATAAAGTAT...TTGGCTCAAGGAATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | AACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCTGGGAAGATTAGAATaGGTAACTTTTTCTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTTKQHHHLSLLKASSAKLGRLE*VTFSCQ Trigger: CTGACAAGAAAAAGTTACCCATTCTAATCTTCCCAG...CTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR CCA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAACTGGGAAGATTAGAATaGGTAACTTTTTCTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHNKTTSSSFTSEGQFCELGRLE*VTFSCQ Trigger: CTGACAAGAAAAAGTTACCCATTCTAATCTTCCCAG...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS-3UTR GCA 90 bp | TCAACATCATCATTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATTGCCCACGATCATCTTaGTGTAATTCTTCTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: STSSFYKSLFPLKNGPYNCPRSS*CNSSVV Trigger: AACAACAGAAGAATTACAGCAAGATGATCGTGGGCA...ATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAATGATGATGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS TCA 90 bp | TCTCCGAGATACCCAGGGATAATCCGAAGGCCGAGGGTAAAAGGATaGGGCCGCCCACCAGCGTCAGCCAGGTGGACAGGAGCTTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: SPRYPGIIRRPRVKG*GRPPASARWTGASP Trigger: CGGTGAAGCTCCTGTCCACCTGGCTGACGCTGGTGGGCGGCCTCATCCTTTTACCCTCGGCCTTCGGATTATCCCTGGGTATCTCGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS CCA 90 bp | CAACCATGGCGTAACATCCATCGGTGGCCAGGATTAGGACATCAATaGGAGAGGTGTGATTGGCGACACAGATACCTCCCTTCTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPWRNIHRWPGLGHQ*ERCDWRHRYLPSGV Trigger: GACCCCAGAAGGGAGGTATCTGTGTCGCCAATCACACCTCTCCCATTGATGTCCTAATCCTGGCCACCGATGGATGTTACGCCATGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS CCA 90 bp | TCAATCCACCGTGAACCTGCCCAACCATGGCGTAACATCCATCGGTaGCCAGGATTAGGACATCAATGGGAGAGGTGTGATTGGCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: SIHREPAQPWRNIHR*PGLGHQWERCDWRH Trigger: GTGTCGCCAATCACACCTCTCCCATTGATGTCCTAATCCTGGCCACCGATGGATGTTACGCCATGGTTGGGCAGGTTCACGGTGGATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS CCA 90 bp | CGTGTGAGGAGGTTCCATGATACTAGCTCTTCGGAGGAGAACCTCTaGGTCACTTCATCCTCCACAATGGCTTCCAACCCCTTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVRRFHDTSSSEENL*VTSSSTMASNPFLE Trigger: CTCCAAGAAGGGGTTGGAAGCCATTGTGGAGGATGAAGTGACCCAGAGGTTCTCCTCCGAAGAGCTAGTATCATGGAACCTCCTCACACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS GCA 90 bp | TACCTCCCTTCTGGGGTCTGTACTGCTTGTTATGGTAATGGATGGTaGCAGATAGGGACCGAACACAGATCCTGCAGCAGGTCAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: YLPSGVCTACYGNGW*QIGTEHRSCSRSDA Trigger: TGCATCTGACCTGCTGCAGGATCTGTGTTCGGTCCCTATCTGGCACCATCCATTACCATAACAAGCAGTACAGACCCCAGAAGGGAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS GCA 90 bp | GCTGTAATTCTTCTGTTGTTCTTCCTTGAAGGTGTCCTTCACCTTTaGTCTCTTCAGCCCTCCATCCCAGGGAAGTTCCGTCAGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVILLLFFLEGVLHL*SLQPSIPGKFRQPS Trigger: GGAGGGCTGACGGAACTTCCCTGGGATGGAGGGCTGAAGAGAGCAAAGGTGAAGGACACCTTCAAGGAAGAACAACAGAAGAATTACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | CCTGTAATCCTAGCACGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTAGGTTGGGAGATCCGTaGCCCACGATCATCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVILARGKWSQNSQFLASRLGDP*PTIILL Trigger: CAGCAAGATGATCGTGGGCAACGGATCTCCCAACCT...ACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACGTGCTAGGATTACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS TCA 90 bp | AGGACACCCAGCACCCACACCATGGTGAGCCTTGGACTGATGTACTaGAAGTTGACATTGGTTCGTGTGAGGAGGTTCCATGATACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTPSTHTMVSLGLMY*KLTLVRVRRFHDTS Trigger: GCTAGTATCATGGAACCTCCTCACACGAACCAATGTCAACTTTCAGTACATCAGTCCAAGGCTCACCATGGTGTGGGTGCTGGGTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS GCA 90 bp | TTCCGTCAGCCCTCCTTGTACAGCGATAGCGGATTTTACCCTGTTTaGAAACTGAACTGCGTCTTCTCCTTCCTCTCTAGTCATGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRQPSLYSDSGFYPV*KLNCVFSFLSSHGR Trigger: CCTCCCATGACTAGAGAGGAAGGAGAAGACGCAGTTCAGTTTGCAAACAGGGTAAAATCCGCTATCGCTGTACAAGGAGGGCTGACGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS CCA 90 bp | AGATACCTCCCTTCTGGGGTCTGTACTGCTTGTTATGGTAATGGATaGTGCCAGATAGGGACCGAACACAGATCCTGCAGCAGGTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RYLPSGVCTACYGNG*CQIGTEHRSCSRSD Trigger: ATCTGACCTGCTGCAGGATCTGTGTTCGGTCCCTATCTGGCACCATCCATTACCATAACAAGCAGTACAGACCCCAGAAGGGAGGTATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS CCA 90 bp | ATCCATCGGTGGCCAGGATTAGGACATCAATGGGAGAGGTGTGATTaGCGACACAGATACCTCCCTTCTGGGGTCTGTACTGCTTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: IHRWPGLGHQWERCD*RHRYLPSGVCTACY Trigger: ATAACAAGCAGTACAGACCCCAGAAGGGAGGTATCTGTGTCGCCAATCACACCTCTCCCATTGATGTCCTAATCCTGGCCACCGATGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | CGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTCTTGGCTACAAAGTGAGGTGTCCTTCACCTTaGCTCTCTTCAGCCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RGKWSQNSQFLASLGYKVRCPSP*LSSALH Trigger: ATGGAGGGCTGAAGAGAGCAAAGGTGAAGGACACCT...CACTTTGTAGCCAAGACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | CCTGTAATCCTAGCACGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTAGGTGTCCTTCACCTTaGCTCTCTTCAGCCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PVILARGKWSQNSQFLASRCPSP*LSSALH Trigger: ATGGAGGGCTGAAGAGAGCAAAGGTGAAGGACACCT...ACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACGTGCTAGGATTACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS CCA 90 bp | CTAGCTCTTCGGAGGAGAACCTCTGGGTCACTTCATCCTCCACAATaGCTTCCAACCCCTTCTTGGAGAAATAGAACACATCAGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LALRRRTSGSLHPPQ*LPTPSWRNRTHQRA Trigger: AGCTCTCTGATGTGTTCTATTTCTCCAAGAAGGGGTTGGAAGCCATTGTGGAGGATGAAGTGACCCAGAGGTTCTCCTCCGAAGAGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATAGGTGTCCTTCACCTTaGCTCTCTTCAGCCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPGMLLKSHLGVEAPACNRCPSP*LSSALH Trigger: ATGGAGGGCTGAAGAGAGCAAAGGTGAAGGACACCT...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | TTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATCCTAGCACGTGGCGGATTTTACCCTGTTaGCAAACTGAACTGCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLKSHLGVEAPACNPSTWRILPC*QTELRL Trigger: AAGACGCAGTTCAGTTTGCAAACAGGGTAAAATCCG...CCACGTGCTAGGATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | CGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTCTTGGCTACAAAGTGCGGATTTTACCCTGTTaGCAAACTGAACTGCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGKWSQNSQFLASLGYKVRILPC*QTELRL Trigger: AAGACGCAGTTCAGTTTGCAAACAGGGTAAAATCCG...CACTTTGTAGCCAAGACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | CCTGTAATCCTAGCACGTGGGAAGTGGAGCCAGAATAGTCAGTTCTTAGCCAGTCGGATTTTACCCTGTTaGCAAACTGAACTGCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PVILARGKWSQNSQFLASRILPC*QTELRL Trigger: AAGACGCAGTTCAGTTTGCAAACAGGGTAAAATCCG...ACTGGCTAAGAACTGACTATTCTGGCTCCACTTCCCACGTGCTAGGATTACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | ACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCCATGTTCACTCAGCCAGTTTTaGAGGCTGCTGTCTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TKQHHHLSLLKASSAKPCSLSQF*RLLSGS Trigger: GCTTCCAGACAGCAGCCTCAAAAACTGGCTGAGTGA...ACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAAGGTTGGGAGATCCGTaGCCCACGATCATCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QHNKTTSSSFTSEGQFCERLGDP*PTIILL Trigger: CAGCAAGATGATCGTGGGCAACGGATCTCCCAACCT...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAATCACTCAGCCAGTTTTaGAGGCTGCTGTCTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QHNKTTSSSFTSEGQFCESLSQF*RLLSGS Trigger: GCTTCCAGACAGCAGCCTCAAAAACTGGCTGAGTGA...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | TCACCTGGTATGTTACTGAAGTCACACCTAGGTGTGGAAGCACCTGCCTGTAATGCTGTAATTCTTCTGTaGTTCTTCCTTGAAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGMLLKSHLGVEAPACNAVILL*FFLEGV Trigger: GACACCTTCAAGGAAGAACAACAGAAGAATTACAGC...ATTACAGGCAGGTGCTTCCACACCTAGGTGTGACTTCAGTAACATACCAGGTGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | ACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCCATGTATGACTGAAGTATTGTaGATGCAAGTACCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TKQHHHLSLLKASSAKPCMTEVL*MQVPSG Trigger: CCCAGAAGGTACTTGCATCAACAATACTTCAGTCAT...ACATGGCTTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAATGACTGAAGTATTGTaGATGCAAGTACCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QHNKTTSSSFTSEGQFCEMTEVL*MQVPSG Trigger: CCCAGAAGGTACTTGCATCAACAATACTTCAGTCAT...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAGCTGTAATTCTTCTGTaGTTCTTCCTTGAAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QHNKTTSSSFTSEGQFCEAVILL*FFLEGV Trigger: GACACCTTCAAGGAAGAACAACAGAAGAATTACAGC...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | CAACACAACAAAACAACATCATCATCTTTCACTTCTGAAGGCCAGTTCTGCGAAATCATGACTGAAGTATaGTTGATGCAAGTACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QHNKTTSSSFTSEGQFCEIMTEV*LMQVPS Trigger: AGAAGGTACTTGCATCAACAATACTTCAGTCATGAT...TTCGCAGAACTGGCCTTCAGAAGTGAAAGATGATGATGTTGTTTTGTTGTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | TCAACATCATCATTTTATAAAAGTCTGTTTCCACTCAAGAACGGGCCTTACAATATGACTGAAGTATTGTaGATGCAAGTACCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: STSSFYKSLFPLKNGPYNMTEVL*MQVPSG Trigger: CCCAGAAGGTACTTGCATCAACAATACTTCAGTCAT...ATTGTAAGGCCCGTTCTTGAGTGGAAACAGACTTTTATAAAATGATGATGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS-3UTR CAA 90 bp | AAATCTTTAGCATACAAACAAGAAAAGCTAACAGTGCTTTCTCCACTGCAGCTGATCATGACTGAAGTATaGTTGATGCAAGTACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KSLAYKQEKLTVLSPLQLIMTEV*LMQVPS Trigger: AGAAGGTACTTGCATCAACAATACTTCAGTCATGAT...CAGCTGCAGTGGAGAAAGCACTGTTAGCTTTTCTTGTTTGTATGCTAAAGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS TCA 72 bp | TACCCAGGGATAATCCGAAGGCCGAGGGTAAAAGGATaGGGCCGCCCACCAGCGTCAGCCAGGTGGACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YPGIIRRPRVKG*GRPPASARWTG Trigger: TCCTGTCCACCTGGCTGACGCTGGTGGGCGGCCTCATCCTTTTACCCTCGGCCTTCGGATTATCCCTGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS TCA 72 bp | TCGGTGGCCAGGATTAGGACATCAATGGGAGAGGTGTaGTTGGCGACACAGATACCTCCCTTCTGGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVARIRTSMGEV*LATQIPPFWGL Trigger: CAGACCCCAGAAGGGAGGTATCTGTGTCGCCAATCACACCTCTCCCATTGATGTCCTAATCCTGGCCACCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS GCA 72 bp | AATGGATGGTGCCAGATAGGGACCGAACACAGATCCTaGAGCAGGTCAGATGCACCAGCTCACTCAGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: NGWCQIGTEHRS*SRSDAPAHSAS Trigger: ACTGGCTGAGTGAGCTGGTGCATCTGACCTGCTGCAGGATCTGTGTTCGGTCCCTATCTGGCACCATCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS CCA 72 bp | CGTGAACCTGCCCAACCATGGCGTAACATCCATCGGTaGCCAGGATTAGGACATCAATGGGAGAGGTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: REPAQPWRNIHR*PGLGHQWERCD Trigger: ATCACACCTCTCCCATTGATGTCCTAATCCTGGCCACCGATGGATGTTACGCCATGGTTGGGCAGGTTCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS CAA 72 bp | CAGCCCTCCATCCCAGGGAAGTTCCGTCAGCCCTCCTaGTACAGCGATAGCGGATTTTACCCTGTTTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QPSIPGKFRQPS*YSDSGFYPVCK Trigger: TTTGCAAACAGGGTAAAATCCGCTATCGCTGTACAAGGAGGGCTGACGGAACTTCCCTGGGATGGAGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS CAA 90 bp | TGCTCTCTTCAGCCCTCCATCCCAGGGAAGTTCCGTCAGCCCTCCTaGTACAGCGATAGCGGATTTTACCCTGTTTGCAAACTGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSLQPSIPGKFRQPS*YSDSGFYPVCKLNC Trigger: GCAGTTCAGTTTGCAAACAGGGTAAAATCCGCTATCGCTGTACAAGGAGGGCTGACGGAACTTCCCTGGGATGGAGGGCTGAAGAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS CCA 72 bp | AGGTTCCATGATACTAGCTCTTCGGAGGAGAACCTCTaGGTCACTTCATCCTCCACAATGGCTTCCAACCCC | + |
|
Preference number: 6 (lower is better) Translates to: RFHDTSSSEENL*VTSSSTMASNP Trigger: GGGGTTGGAAGCCATTGTGGAGGATGAAGTGACCCAGAGGTTCTCCTCCGAAGAGCTAGTATCATGGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS CCA 72 bp | CCTTCTGGGGTCTGTACTGCTTGTTATGGTAATGGATaGTGCCAGATAGGGACCGAACACAGATCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSGVCTACYGNG*CQIGTEHRSCS Trigger: GCTGCAGGATCTGTGTTCGGTCCCTATCTGGCACCATCCATTACCATAACAAGCAGTACAGACCCCAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS CCA 72 bp | TGGCCAGGATTAGGACATCAATGGGAGAGGTGTGATTaGCGACACAGATACCTCCCTTCTGGGGTCTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: WPGLGHQWERCD*RHRYLPSGVCT Trigger: AGTACAGACCCCAGAAGGGAGGTATCTGTGTCGCCAATCACACCTCTCCCATTGATGTCCTAATCCTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS CCA 72 bp | CGTAACATCCATCGGTGGCCAGGATTAGGACATCAATaGGAGAGGTGTGATTGGCGACACAGATACCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RNIHRWPGLGHQ*ERCDWRHRYLP Trigger: AGGGAGGTATCTGTGTCGCCAATCACACCTCTCCCATTGATGTCCTAATCCTGGCCACCGATGGATGTTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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| CDS GCA 72 bp | CTTCTGTTGTTCTTCCTTGAAGGTGTCCTTCACCTTTaGTCTCTTCAGCCCTCCATCCCAGGGAAGTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LLLFFLEGVLHL*SLQPSIPGKFR Trigger: ACGGAACTTCCCTGGGATGGAGGGCTGAAGAGAGCAAAGGTGAAGGACACCTTCAAGGAAGAACAACAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS TCA 72 bp | AGCACCCACACCATGGTGAGCCTTGGACTGATGTACTaGAAGTTGACATTGGTTCGTGTGAGGAGGTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: STHTMVSLGLMY*KLTLVRVRRFH Trigger: ATGGAACCTCCTCACACGAACCAATGTCAACTTTCAGTACATCAGTCCAAGGCTCACCATGGTGTGGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS CCA 72 bp | CTGACTCCTTGGGGGCTCCTTTCTGAATTCGTAATGTaGCCCACTCCAAGGTTTTCACCAGGATCTTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: LTPWGLLSEFVM*PTPRFSPGSSC Trigger: ACATGAAGATCCTGGTGAAAACCTTGGAGTGGGCCACATTACGAATTCAGAAAGGAGCCCCCAAGGAGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS CCA 72 bp | TCACTCAGCCAGTTTTTGAGGCTGCTGTCTGGAAGCTaGCCAACCAGTGTAGTTCCTATAATCAGCAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLSQFLRLLSGS*PTSVVPIISKL Trigger: CAGCTTGCTGATTATAGGAACTACACTGGTTGGCCAGCTTCCAGACAGCAGCCTCAAAAACTGGCTGAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS CCA 72 bp | GGCATCGCCGAACTGGGGGTTATACTTTATGGCCACTaGATAGATGGTTCCTCCGATTTCAAAGCTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GIAELGVILYGH*IDGSSDFKASL Trigger: AAGGGAAGCTTTGAAATCGGAGGAACCATCTATCCAGTGGCCATAAAGTATAACCCCCAGTTCGGCGATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS CAA 90 bp | GTTGGGAGATCCGTTGCCCACGATCATCTTGCTGTAATTCTTCTGTaGTTCTTCCTTGAAGGTGTCCTTCACCTTTGCTCTCTTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VGRSVAHDHLAVILL*FFLEGVLHLCSLQP Trigger: GGGCTGAAGAGAGCAAAGGTGAAGGACACCTTCAAGGAAGAACAACAGAAGAATTACAGCAAGATGATCGTGGGCAACGGATCTCCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS CAA 90 bp | TTGATGCAAGTACCTTCTGGGAAGATTAGAATGGGTAACTTTTTCTaGTCAGCAATGTGTTCTTTTAATCTCTTAGTCACTAGATGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LMQVPSGKIRMGNFF*SAMCSFNLLVTRCL Trigger: CAGACATCTAGTGACTAAGAGATTAAAAGAACACATTGCTGACAAGAAAAAGTTACCCATTCTAATCTTCCCAGAAGGTACTTGCATCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
||
| CDS CAA 72 bp | GTACCTTCTGGGAAGATTAGAATGGGTAACTTTTTCTaGTCAGCAATGTGTTCTTTTAATCTCTTAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: VPSGKIRMGNFF*SAMCSFNLLVT Trigger: AGTGACTAAGAGATTAAAAGAACACATTGCTGACAAGAAAAAGTTACCCATTCTAATCTTCCCAGAAGGTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031255.15 ENSMUST00000092990.4 ENSMUST00000112887.8 |
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