Pregenerated sensors for GPAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046338Ensembl transcript IDs: ENSMUST00000062211.4
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACACCAGGGCAGAAAGCCTaGGCCCTGGGGACCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PNDEQTQVQVSCVLSRDTPGQKA*ALGTQG Trigger: CCCCTGGGTCCCCAGGGCCCAGGCTTTCTGCCCTGG...TGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | ACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACGGGCGGGGTGTGGTCTaGATGTGGCCCAGGATACGC | + |
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Preference number: 4 (lower is better) Translates to: TPNDEQTQVQVSCVLSRDGRGVV*MWPRIR Trigger: GCGTATCCTGGGCCACATTCAGACCACACCCCGCCC...GTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR GCA 90 bp | CAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACACACTTGAGTTTACAGCAACCCCCGCACTaGACAGGCACCCACAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QTQVQVSCVLSRDTHLSLQQPPH*TGTHSL Trigger: GAGGCTGTGGGTGCCTGTGCAGTGCGGGGGTTGCTG...TAAACTCAAGTGTGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | ACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACGCACCGCAGCTGCCCTaGGAAGCCCACATCAAAACC | + |
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Preference number: 4 (lower is better) Translates to: TPNDEQTQVQVSCVLSRDAPQLP*EAHIKT Trigger: GGTTTTGATGTGGGCTTCTCAGGGCAGCTGCGGTGC...GTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | GTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCAGCGTGCCAGGTGTGTaGGGCCTGGGCCAGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: VYLLHQMMSKHRFRLAVSSVPGV*GLGQAE Trigger: CTCGGCCTGGCCCAGGCCTCACACACCTGGCACGCT...GGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACAAGAAGGGGCGGGGTGTaGTCTGAATGTGGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PNDEQTQVQVSCVLSRDTRRGGV*SECGPG Trigger: TCCTGGGCCACATTCAGACCACACCCCGCCCCTTCT...TGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | ATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAAGAAAGCCTGGGCCCTaGGGACCCAGGGGGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ITPNDEQTQVQVSCVLSRRKPGP*GPRGLF Trigger: GAAGAGCCCCCTGGGTCCCCAGGGCCCAGGCTTTCT...TCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACACACTTGAGTTTAACTCCTAGCCAGGCCTaGCCCAGGGCAGAAAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: QTQVQVSCVLSRDTHLSLTPSQA*PRAESL Trigger: CAGGCTTTCTGCCCTGGGCCAGGCCTGGCTAGGAGT...TAAACTCAAGTGTGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | CCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACATTCTCCCAGGAGCTGTaGCAGGACCACACCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: PNDEQTQVQVSCVLSRDTFSQEL*QDHTLL Trigger: CAAAAGGGTGTGGTCCTGTCACAGCTCCTGGGAGAA...TGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | ACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACTGGAGGGAAAATGGCTaGGCAAGGTGCACCCGAACA | + |
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Preference number: 4 (lower is better) Translates to: TPNDEQTQVQVSCVLSRDWRENG*ARCTRT Trigger: TGTTCGGGTGCACCTTGCCCAGCCATTTTCCCTCCA...GTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | ACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACTCCTCAATAGAGCTCTaGGAGCAGGGGAACATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPNDEQTQVQVSCVLSRDSSIEL*EQGNMC Trigger: GCACATGTTCCCCTGCTCTCAGAGCTCTATTGAGGA...GTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACAAGAAAGGAAGACAAGTaGAGAGCCCTCCTGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNDEQTQVQVSCVLSRDTRKEDK*RALLHS Trigger: GCTGTGCAGGAGGGCTCTCCACTTGTCTTCCTTTCT...TGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACAACTAGGAGTCCACACTaGATGAGCCGGTCTAGCACT | + |
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Preference number: 4 (lower is better) Translates to: PNDEQTQVQVSCVLSRDTTRSPH*MSRSST Trigger: AGTGCTAGACCGGCTCATCCAGTGTGGACTCCTAGT...TGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACACACTTGAGTTTAGAAGCAGCGGCCTCCTaGCTCCTCAAAGTCATCACT | + |
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Preference number: 4 (lower is better) Translates to: QTQVQVSCVLSRDTHLSLEAAAS*LLKVIT Trigger: AGTGATGACTTTGAGGAGCCAGGAGGCCGCTGCTTC...TAAACTCAAGTGTGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | CAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACACACTTGAGTTTATGCAAGGATGCCCTCTaGGTTGTCCAAGGAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QTQVQVSCVLSRDTHLSLCKDAL*VVQGEV Trigger: AACCTCTCCTTGGACAACTCAGAGGGCATCCTTGCA...TAAACTCAAGTGTGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR GCA 90 bp | ATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGACCCGAGAGGAGGTTCTaGACCCCAGTGTTTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: ITPNDEQTQVQVSCVLSRPERRF*TPVFSM Trigger: CATGGAAAACACTGGGGTGCAGAACCTCCTCTCGGG...TCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR GCA 90 bp | CCTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGGCTGTGCTCATCACTaGGGAGCTGGCCACACTGGC | + |
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Preference number: 4 (lower is better) Translates to: PSLFITPNDEQTQVQVSCGCAHH*GAGHTG Trigger: GCCAGTGTGGCCAGCTCCGCAGTGATGAGCACAGCC...ACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR GCA 90 bp | GTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCGAAGGTGGCCGCCTGTaGGAAGGCCTTGAGTATGGG | + |
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Preference number: 4 (lower is better) Translates to: VYLLHQMMSKHRFRLAVSEGGRL*EGLEYG Trigger: CCCATACTCAAGGCCTTCGCACAGGCGGCCACCTTC...GGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | GTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCACTAATTCAGGCGCCTaGCCTTCTCCAGCCGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VYLLHQMMSKHRFRLAVSTNSGA*PSPAAP Trigger: GGGAGCGGCTGGAGAAGGCCAGGCGCCTGAATTAGT...GGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGTGTCACAGGCTaGCCGGGAGCCTGGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LVYLLHQMMSKHRFRLAVSCVTG*PGAWSL Trigger: GAGACTCCAGGCTCCCGGCCAGCCTGTGACACAGGA...CACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR GCA 90 bp | TTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCTCTGAATCTGGCAGCTaGCCTAAGTGGAGGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: FITPNDEQTQVQVSCVLSSESGS*PKWRKV Trigger: CACCTTCCTCCACTTAGGGCAGCTGCCAGATTCAGA...GCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | ACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACATACTTTCCCAGGAATaGAGTGATGGCCTCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: TPNDEQTQVQVSCVLSRDILSQE*SDGLHL Trigger: AAGATGGAGGCCATCACTCCATTCCTGGGAAAGTAT...GTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CCTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGCCAGCCCCGGAACCTaGTGTTCTCCTCCTTCACAA | + |
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Preference number: 4 (lower is better) Translates to: PSLFITPNDEQTQVQVSCASPGT*CSPPSQ Trigger: TTGTGAAGGAGGAGAACACCAGGTTCCGGGGCTGGC...ACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | GTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCACCAAGTCCCCTTGGTaGACACGCAGCAGAACCACA | + |
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Preference number: 4 (lower is better) Translates to: VYLLHQMMSKHRFRLAVSTKSPW*TRSRTT Trigger: TGTGGTTCTGCTGCGTGTCCACCAAGGGGACTTGGT...GGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | TTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCCGGTACAGTTCATTCTaGCTCAGTAGCTCTATGCCC | + |
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Preference number: 4 (lower is better) Translates to: FITPNDEQTQVQVSCVLSRYSSF*LSSSMP Trigger: GGGCATAGAGCTACTGAGTCAGAATGAACTGTACCG...GCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | CTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGGGGCTAGGCATCTCCTaGAGTACCCCCAGATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LVYLLHQMMSKHRFRLAVGLGIS*STPRSL Trigger: CAAAGATCTGGGGGTACTTCAGGAGATGCCTAGCCC...CACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR GCA 90 bp | TTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAAGTGTTCCAGGGTCTaGCTGCTATCCCAGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: FITPNDEQTQVQVSCVLSKCSRV*LLSQQL Trigger: AAGTTGCTGGGATAGCAGGCAGACCCTGGAACACTT...GCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | TTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCCTCCTCTGCTGGGTTTaGGGGTTGGATTTCAACATG | + |
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Preference number: 4 (lower is better) Translates to: FITPNDEQTQVQVSCVLSLLCWV*GLDFNM Trigger: CATGTTGAAATCCAACCCCCAAACCCAGCAGAGGAG...GCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | TTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCTGGTTACTCCTCTGCTaGGTTTGGGGGTTGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: FITPNDEQTQVQVSCVLSWLLLC*VWGLDF Trigger: GAAATCCAACCCCCAAACCCAGCAGAGGAGTAACCA...GCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | GTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTTAGGAGTACAGGTCTaGCAGCAGCGGCCCATAAAG | + |
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Preference number: 4 (lower is better) Translates to: VYLLHQMMSKHRFRLAVSLGVQV*QQRPIK Trigger: CTTTATGGGCCGCTGCTGCCAGACCTGTACTCCTAA...GGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACATTTTCCATGATCTTCTaGGAGGCATCAAAACTGGTG | + |
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Preference number: 4 (lower is better) Translates to: PNDEQTQVQVSCVLSRDTFSMIF*EASKLV Trigger: CACCAGTTTTGATGCCTCCCAGAAGATCATGGAAAA...TGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | GTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCACCACACCGAGGCCTTaGGAGAACAGTACAAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VYLLHQMMSKHRFRLAVSTTPRP*ENSTKG Trigger: GCCTTTTGTACTGTTCTCCCAAGGCCTCGGTGTGGT...GGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | CCTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTCTTCATCCCAAAGCTTaGGGACCAAAGGCTGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: PSLFITPNDEQTQVQVSCLHPKA*GPKAGL Trigger: GAGACCAGCCTTTGGTCCTCAAGCTTTGGGATGAAG...ACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR GCA 90 bp | CCTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTCACAGACTCTACGGTTaGAGCCCCAGCAGTTACACA | + |
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Preference number: 4 (lower is better) Translates to: PSLFITPNDEQTQVQVSCHRLYG*SPSSYT Trigger: TGTGTAACTGCTGGGGCTGCAACCGTAGAGTCTGTG...ACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGGGGAGGCATCAAAACTaGTGGGTATGTGCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LVYLLHQMMSKHRFRLAVGRHQN*WVCAAP Trigger: TGGAGCAGCACATACCCACCAGTTTTGATGCCTCCC...CACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | TTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCTTGATGGTGTATTCCTaGAGGGAAAATGGCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FITPNDEQTQVQVSCVLSLMVYS*RENGWA Trigger: TGCCCAGCCATTTTCCCTCCAGGAATACACCATCAA...GCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | AGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCAAAGGCTGGTCTCTTaGCCATTGTGGTTACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLFITPNDEQTQVQVSCVQRLVS*PLWLLL Trigger: GAGGAGTAACCACAATGGTCAAGAGACCAGCCTTTG...GACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR TCA 90 bp | CTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGCCCCAGTGTTTTCCATaGTCTTCTGGGAGGCATCAA | + |
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Preference number: 4 (lower is better) Translates to: LVYLLHQMMSKHRFRLAVPQCFP*SSGRHQ Trigger: TTGATGCCTCCCAGAAGATCATGGAAAACACTGGGG...CACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR GCA 90 bp | GTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTCACAAGGATCACGTTaGAGAAGCCCAGGTCCATTA | + |
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Preference number: 4 (lower is better) Translates to: VYLLHQMMSKHRFRLAVSSQGSR*RSPGPL Trigger: TAATGGACCTGGGCTTCTGCAACGTGATCCTTGTGA...GGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR GCA 90 bp | GTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCAGCTTTGCACTCAGATaGTGTCTTCCTGTGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: VYLLHQMMSKHRFRLAVSSFALR*CLPVSQ Trigger: CTGTGACACAGGAAGACAGCATCTGAGTGCAAAGCT...GGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR GCA 90 bp | AGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTTCCACAGCAGCTTTaGACTCAGATGCTGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLFITPNDEQTQVQVSCVLPQQL*TQMLSS Trigger: GGAAGACAGCATCTGAGTGCAAAGCTGCTGTGGAAG...GACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | GTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTTGAGGACCAAAGGCTaGTCTCTTGACCATTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: VYLLHQMMSKHRFRLAVSLRTKG*SLDHCG Trigger: ACCACAATGGTCAAGAGACCAGCCTTTGGTCCTCAA...GGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | TTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCATTCACCTAGCACAATaGGCTGCAACAAGTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FITPNDEQTQVQVSCVLSIHLAQ*AATSVP Trigger: TGGAACACTTGTTGCAGCCCATTGTGCTAGGTGAAT...GCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CCTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTAGGACCACACCCTTTTaGTGCTTCAGCAAAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PSLFITPNDEQTQVQVSCRTTPF*CFSKSS Trigger: ACTGCTTTTGCTGAAGCACCAAAAGGGTGTGGTCCT...ACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGAGGGGAGCCAAATCATaGTTCATGTTACATGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LVYLLHQMMSKHRFRLAVRGAKS*FMLHGA Trigger: TGCACCATGTAACATGAACCATGATTTGGCTCCCCT...CACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | CCTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTCTCACTCAGGAAGGTTaGCAGCAATTCCATACTCAA | + |
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Preference number: 4 (lower is better) Translates to: PSLFITPNDEQTQVQVSCLTQEG*QQFHTQ Trigger: TTGAGTATGGAATTGCTGCCAACCTTCCTGAGTGAG...ACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CCA 90 bp | AGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCACTGATAGCAAGGTTTaGGTCTGCACACTCAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SLFITPNDEQTQVQVSCVTDSKV*VCTLKD Trigger: ATCTTTGAGTGTGCAGACCCAAACCTTGCTATCAGT...GACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS GCA 90 bp | GGGAAAATGGCTGGGCAAGGTGCACCCGAACACAGACTCTACGGTTaGAGCCCCAGCAGTTACACAGTCTCCGAAAGACAGCCAAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GKMAGQGAPEHRLYG*SPSSYTVSERQPRL Trigger: GAGCCTTGGCTGTCTTTCGGAGACTGTGTAACTGCTGGGGCTGCAACCGTAGAGTCTGTGTTCGGGTGCACCTTGCCCAGCCATTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 90 bp | ACACGCAGCAGAACCACATGTGCCCTCAATAGGCTCAGTGTATGTTaGGCCAGGCACCGCAGCTGCCCTGAGAAGCCCACATCAAAACCT | + |
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Preference number: 5 (lower is better) Translates to: TRSRTTCALNRLSVC*ARHRSCPEKPTSKP Trigger: AGGTTTTGATGTGGGCTTCTCAGGGCAGCTGCGGTGCCTGGCCCAACATACACTGAGCCTATTGAGGGCACATGTGGTTCTGCTGCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 90 bp | GAACATGTGCGGGAGTCTAAAGCCACACGGACCACACCGAGGCCTTaGGAGAACAGTACAAAAGGCAGCAGGAATCCATCCAAGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: EHVRESKATRTTPRP*ENSTKGSRNPSKRD Trigger: GTCCCTCTTGGATGGATTCCTGCTGCCTTTTGTACTGTTCTCCCAAGGCCTCGGTGTGGTCCGTGTGGCTTTAGACTCCCGCACATGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS GCA 90 bp | CTAGCATTGATGGTGTATTCCTGGAGGGAAAATGGCTGGGCAAGGTaGACCCGAACACAGACTCTACGGTTGCAGCCCCAGCAGTTACAC | + |
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Preference number: 5 (lower is better) Translates to: LALMVYSWRENGWAR*TRTQTLRLQPQQLH Trigger: GTGTAACTGCTGGGGCTGCAACCGTAGAGTCTGTGTTCGGGTGCACCTTGCCCAGCCATTTTCCCTCCAGGAATACACCATCAATGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 90 bp | CAGCAACTTCTAGCATTGATGGTGTATTCCTGGAGGGAAAATGGCTaGGCAAGGTGCACCCGAACACAGACTCTACGGTTGCAGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: QQLLALMVYSWRENG*ARCTRTQTLRLQPQ Trigger: CTGGGGCTGCAACCGTAGAGTCTGTGTTCGGGTGCACCTTGCCCAGCCATTTTCCCTCCAGGAATACACCATCAATGCTAGAAGTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 90 bp | ATCCCAGCAACTTCTAGCATTGATGGTGTATTCCTGGAGGGAAAATaGCTGGGCAAGGTGCACCCGAACACAGACTCTACGGTTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: IPATSSIDGVFLEGK*LGKVHPNTDSTVAA Trigger: GGCTGCAACCGTAGAGTCTGTGTTCGGGTGCACCTTGCCCAGCCATTTTCCCTCCAGGAATACACCATCAATGCTAGAAGTTGCTGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CAA 90 bp | ATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGCAGCTCCTCCACAGTaGCACGGACCACAGCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ITPNDEQTQVQVSCVLSRAAPPQ*HGPQPL Trigger: CAAGGGCTGTGGTCCGTGCAACTGTGGAGGAGCTGC...TCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS GCA 90 bp | GCTAGGCATCTCCTGAAGTACCCCCAGATCTTTGAACGTCCAGACTaGACTGATAGCAAGGTTTGGGTCTGCACACTCAAAGATCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ARHLLKYPQIFERPD*TDSKVWVCTLKDPF Trigger: GAAGGGATCTTTGAGTGTGCAGACCCAAACCTTGCTATCAGTGCAGTCTGGACGTTCAAAGATCTGGGGGTACTTCAGGAGATGCCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CAA 90 bp | AGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCCAGGAGGAGGCCAGTaGGTGGGGTCCACTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SLFITPNDEQTQVQVSCVPGGGQ*VGSTPA Trigger: AGCAGGAGTGGACCCCACCAACTGGCCTCCTCCTGG...GACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CAA 90 bp | ACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACCAGGACCACACCCTTTaGGTGCTTCAGCAAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TPNDEQTQVQVSCVLSRDQDHTL*VLQQKQ Trigger: CTGCTTTTGCTGAAGCACCAAAAGGGTGTGGTCCTG...GTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CAA 90 bp | CCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACAGCTTCCACAGCAGCTTaGCACTCAGATGCTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PNDEQTQVQVSCVLSRDTASTAA*HSDAVF Trigger: GAAGACAGCATCTGAGTGCAAAGCTGCTGTGGAAGC...TGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CAA 90 bp | CAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACACACTTGAGTTTATGCTGGGTTTGGGGGTaGGATTTCAACATGGTATCC | + |
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Preference number: 5 (lower is better) Translates to: QTQVQVSCVLSRDTHLSLCWVWG*DFNMVS Trigger: GGATACCATGTTGAAATCCAACCCCCAAACCCAGCA...TAAACTCAAGTGTGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CAA 90 bp | CCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGAGACACACCATCCAAGAGGGACTaGTGTGTAGAAAGGAAGACA | + |
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Preference number: 5 (lower is better) Translates to: PNDEQTQVQVSCVLSRDTPSKRD*CVERKT Trigger: TGTCTTCCTTTCTACACACAAGTCCCTCTTGGATGG...TGTGTCTCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CAA 90 bp | CTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGCACCACCAAGTCCCCTaGGTGGACACGCAGCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: LVYLLHQMMSKHRFRLAVHHQVP*VDTQQN Trigger: GTTCTGCTGCGTGTCCACCAAGGGGACTTGGTGGTG...CACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CAA 90 bp | ATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTGTCCTGAGCAGACCTCACTCAGGAAGGTaGGCAGCAATTCCATACTCA | + |
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Preference number: 5 (lower is better) Translates to: ITPNDEQTQVQVSCVLSRPHSGR*AAIPYS Trigger: TGAGTATGGAATTGCTGCCAACCTTCCTGAGTGAGG...TCTGCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CAA 90 bp | CCTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTAGGATGCCCTCTGAGTaGTCCAAGGAGAGGTTGACC | + |
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Preference number: 5 (lower is better) Translates to: PSLFITPNDEQTQVQVSCRMPSE*SKERLT Trigger: GGTCAACCTCTCCTTGGACAACTCAGAGGGCATCCT...ACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS-3UTR CAA 90 bp | CCTAGTCTATTTATTACACCAAATGATGAGCAAACACAGGTTCAGGTTAGCTGTACTCCTCTGCTGGGTTaGGGGGTTGGATTTCAACAT | + |
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Preference number: 5 (lower is better) Translates to: PSLFITPNDEQTQVQVSCTPLLG*GVGFQH Trigger: ATGTTGAAATCCAACCCCCAAACCCAGCAGAGGAGT...ACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAATAAATAGACTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 72 bp | GCCTGGACCGCCTGGATTACCACTCCTAGCCAGGCCTaGCCCAGGGCAGAAAGCCTGGGCCCTGGGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: AWTAWITTPSQA*PRAESLGPGDP Trigger: TGGGTCCCCAGGGCCCAGGCTTTCTGCCCTGGGCCAGGCCTGGCTAGGAGTGGTAATCCAGGCGGTCCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 72 bp | GGGCCAGGCCGAGGTACCACCACCAAGTCCCCTTGGTaGACACGCAGCAGAACCACATGTGCCCTCAATAGG | + |
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Preference number: 6 (lower is better) Translates to: GPGRGTTTKSPW*TRSRTTCALNR Trigger: CCTATTGAGGGCACATGTGGTTCTGCTGCGTGTCCACCAAGGGGACTTGGTGGTGGTACCTCGGCCTGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS TCA 72 bp | GCTCAGTGTATGTTGGGCCAGGCACCGCAGCTGCCCTaGGAAGCCCACATCAAAACCTCGGAGCAGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: AQCMLGQAPQLP*EAHIKTSEQCL Trigger: GAGACACTGCTCCGAGGTTTTGATGTGGGCTTCTCAGGGCAGCTGCGGTGCCTGGCCCAACATACACTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 72 bp | AGAACCACATGTGCCCTCAATAGGCTCAGTGTATGTTaGGCCAGGCACCGCAGCTGCCCTGAGAAGCCCACA | + |
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Preference number: 6 (lower is better) Translates to: RTTCALNRLSVC*ARHRSCPEKPT Trigger: TGTGGGCTTCTCAGGGCAGCTGCGGTGCCTGGCCCAACATACACTGAGCCTATTGAGGGCACATGTGGTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS TCA 72 bp | AGGTGGAGCTGGGGTCCTGTAGGGCTAGGCATCTCCTaGAGTACCCCCAGATCTTTGAACGTCCAGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: RWSWGPVGLGIS*STPRSLNVQTA Trigger: TGCAGTCTGGACGTTCAAAGATCTGGGGGTACTTCAGGAGATGCCTAGCCCTACAGGACCCCAGCTCCACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 72 bp | CGGGAGTCTAAAGCCACACGGACCACACCGAGGCCTTaGGAGAACAGTACAAAAGGCAGCAGGAATCCATCC | + |
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Preference number: 6 (lower is better) Translates to: RESKATRTTPRP*ENSTKGSRNPS Trigger: GGATGGATTCCTGCTGCCTTTTGTACTGTTCTCCCAAGGCCTCGGTGTGGTCCGTGTGGCTTTAGACTCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 72 bp | GCGGGATTGCTGGCTAAGCCTGAAGCAGCGGCCTCCTaGCTCCTCAAAGTCATCACTCTCACTGTCAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: AGLLAKPEAAAS*LLKVITLTVSK Trigger: TTTACTGACAGTGAGAGTGATGACTTTGAGGAGCCAGGAGGCCGCTGCTTCAGGCTTAGCCAGCAATCCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS GCA 72 bp | TCCGGAACAACACTACATTCACCTAGCACAATGGGCTaGAACAAGTGTTCCAGGGTCTGCCTGCTATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SGTTLHSPSTMG*NKCSRVCLLSQ Trigger: CTGGGATAGCAGGCAGACCCTGGAACACTTGTTGCAGCCCATTGTGCTAGGTGAATGTAGTGTTGTTCCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 72 bp | CTAGCATTGATGGTGTATTCCTGGAGGGAAAATGGCTaGGCAAGGTGCACCCGAACACAGACTCTACGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LALMVYSWRENG*ARCTRTQTLRL Trigger: CAACCGTAGAGTCTGTGTTCGGGTGCACCTTGCCCAGCCATTTTCCCTCCAGGAATACACCATCAATGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 72 bp | AATTCTCCCAGGAGCTGTGACAGGACCACACCCTTTTaGTGCTTCAGCAAAAGCAGTGTGGCCATGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: NSPRSCDRTTPF*CFSKSSVAMMA Trigger: AGCCATCATGGCCACACTGCTTTTGCTGAAGCACCAAAAGGGTGTGGTCCTGTCACAGCTCCTGGGAGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS GCA 72 bp | CTCCTGAAGTACCCCCAGATCTTTGAACGTCCAGACTaGACTGATAGCAAGGTTTGGGTCTGCACACTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLKYPQIFERPD*TDSKVWVCTLK Trigger: TTTGAGTGTGCAGACCCAAACCTTGCTATCAGTGCAGTCTGGACGTTCAAAGATCTGGGGGTACTTCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CAA 72 bp | AGTACAAAAGGCAGCAGGAATCCATCCAAGAGGGACTaGTGTGTAGAAAGGAAGACAAGTGGAGAGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: STKGSRNPSKRD*CVERKTSGEPS Trigger: GGAGGGCTCTCCACTTGTCTTCCTTTCTACACACAAGTCCCTCTTGGATGGATTCCTGCTGCCTTTTGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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| CDS CCA 72 bp | ATCTTTGAACGTCCAGACTGCACTGATAGCAAGGTTTaGGTCTGCACACTCAAAGATCCCTTCTTCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: IFERPDCTDSKV*VCTLKDPFFLG Trigger: GCCCAAGAAGAAGGGATCTTTGAGTGTGCAGACCCAAACCTTGCTATCAGTGCAGTCTGGACGTTCAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062211.4 |
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