Pregenerated sensors for GPANK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092417Ensembl transcript IDs: ENSMUST00000052167.9, ENSMUST00000165306.3, ENSMUST00000173043.4, ENSMUST00000173380.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCAGCGGCGCCCTGGCCTaGTCGGGCAGCACACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: EVQVSKSEAQVQRVTDQGSGALA*SGSTHQ Trigger: TTGATGTGTGCTGCCCGAGCAGGCCAGGGCGCCGCT...GCCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | AGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCCAGCTCCCCCTGCCTCTTaGGGTTCTAGCAGCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSVQVRGPSPASDRPGPAPPAS*GSSSLR Trigger: CCGGAGGCTGCTAGAACCCCAAGAGGCAGGGGGAGC...TGGCCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | GGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGATCCCCATTCTGGGCTaGCAGCAGGATCCACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLRVRKSKCPSQRPKSSEIPILG*QQDPLG Trigger: GCCCAGTGGATCCTGCTGGCAGCCCAGAATGGGGAT...CTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTAAGGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCGCTCCCCCTGCCTCTTaGGGTTCTAGCAGCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QLRPKGSEVQVSKSEAQVAPPAS*GSSSLR Trigger: CCGGAGGCTGCTAGAACCCCAAGAGGCAGGGGGAGC...GACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCCTTAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCAGGGCTGGGGTCTCCTaGACAGTGACAGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVQVSKSEAQVQRVTDQGRAGVS*TVTAGE Trigger: CTCACCTGCTGTCACTGTCCAGGAGACCCCAGCCCT...GCCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGAGCCAGGACTGGAAGTaGGCACCCCAAGGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVQVRGPSPASDRPGSQDWK*APQGEG Trigger: ACCTTCCCCTTGGGGTGCCCACTTCCAGTCCTGGCT...CCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGGGCTCTGCTTTCTCCTaGTGTGGTTGCTGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVQVRGPSPASDRPGGSAFS*CGCCCP Trigger: TGGGCAGCAGCAACCACAGCAGGAGAAAGCAGAGCC...CCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | GAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCTTGTCTGGGGACTCCTaGTGCTGCAGGCTCCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVQVSKSEAQVQRVTDQGLSGDS*CCRLPS Trigger: ACTAGGGAGCCTGCAGCAGCAGGAGTCCCCAGACAA...GCCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | GAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCTACCTCAGGGAAGCCTaGTTCTTCAGCCAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVQVSKSEAQVQRVTDQGYLREA*FFSQLG Trigger: GCCCAGCTGGCTGAAGAAGCAGGCTTCCCTGAGGTA...GCCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | GGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTACCTCAGGGAAGCCTaGTTCTTCAGCCAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLRVRKSKCPSQRPKSSEYLREA*FFSQLG Trigger: GCCCAGCTGGCTGAAGAAGCAGGCTTCCCTGAGGTA...CTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCGCCAGCAGGATCCACTaGGCCATCCTGTCTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EVQVSKSEAQVQRVTDQGASRIH*AILSSS Trigger: GGATGAAGACAGGATGGCCCAGTGGATCCTGCTGGC...GCCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGGTCAGATCCCCATTCTaGGCTGCCAGCAGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVQVRGPSPASDRPGVRSPF*AASRIH Trigger: GTGGATCCTGCTGGCAGCCCAGAATGGGGATCTGAC...CCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | GGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGAAGGGCTGGGGTCTCCTaGACAGTGACAGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFGSPSVQVRGPSPASDRRAGVS*TVTAGE Trigger: CTCACCTGCTGTCACTGTCCAGGAGACCCCAGCCCT...TCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | TTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAATCCCCATTCTGGGCTaGCAGCAGGATCCACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FGSPSVQVRGPSPASDRPIPILG*QQDPLG Trigger: GCCCAGTGGATCCTGCTGGCAGCCCAGAATGGGGAT...TGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | TTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGCTGGGCAGCATCTCTaGCTCCCAGGTCACAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: FGSPSVQVRGPSPASDRPAGQHL*LPGHRL Trigger: GAGTCTGTGACCTGGGAGGCAGAGATGCTGCCCAGC...TGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCTCGCTCCCAGGCTCTaGCCTTTTCTTCTTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVQVRGPSPASDRPGLAPRL*PFLLAF Trigger: GAAGGCAAGAAGAAAAGGGCAGAGCCTGGGAGCGAG...CCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | GGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGAGTGCTCTTCCTTGTCTaGGGACTCCTGCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFGSPSVQVRGPSPASDRVLFLV*GLLLLQ Trigger: CTGCAGCAGCAGGAGTCCCCAGACAAGGAAGAGCAC...TCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | AGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCCACAGTCCTCACAGAACTaGGACGAGGAGGGGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPSVQVRGPSPASDRPGPQSSQN*DEEGVD Trigger: ATCTACCCCCTCCTCGTCCCAGTTCTGTGAGGACTG...TGGCCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTAAGGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCGGAAGGTTGGAGGGCTaGGGTCTCCTGGACAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLRPKGSEVQVSKSEAQVGRLEG*GLLDSD Trigger: GTCACTGTCCAGGAGACCCCAGCCCTCCAACCTTCC...GACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCCTTAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | TTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAAGCCAGGACTGGAAGTaGGCACCCCAAGGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGSPSVQVRGPSPASDRPSQDWK*APQGEG Trigger: ACCTTCCCCTTGGGGTGCCCACTTCCAGTCCTGGCT...TGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR TCA 90 bp | GGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACTCCATGACTCTCTCTaGCCATACGGGCTACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFGSPSVQVRGPSPASDRLHDSL*PYGLPQ Trigger: CTGAGGTAGCCCGTATGGTCAGAGAGAGTCATGGAG...TCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR TCA 90 bp | GGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCTTCTGTTCTCCCTCTaGCTCAGTGTGGCAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVQVRGPSPASDRPGLLFSL*LSVATR Trigger: TCGAGTTGCCACACTGAGTCAGAGGGAGAACAGAAG...CCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | TTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGTGCTCTTCCTTGTCTaGGGACTCCTGCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FGSPSVQVRGPSPASDRPVLFLV*GLLLLQ Trigger: CTGCAGCAGCAGGAGTCCCCAGACAAGGAAGAGCAC...TGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTAAGGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCTGCTGTGGTTGCTGCTaGCCATCCTTCCAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLRPKGSEVQVSKSEAQVCCGCC*PSFQRS Trigger: TGACCTCTGGAAGGATGGGCAGCAGCAACCACAGCA...GACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCCTTAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | TTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCATGCTGTGGTTGCTGCTaGCCATCCTTCCAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FGSPSVQVRGPSPASDRPCCGCC*PSFQRS Trigger: TGACCTCTGGAAGGATGGGCAGCAGCAACCACAGCA...TGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | TTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCATTCTCCTGCTGTGGTTaGTGCTGCCCATCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FGSPSVQVRGPSPASDRPFSCCG*CCPSFQ Trigger: CTGGAAGGATGGGCAGCAGCAACCACAGCAGGAGAA...TGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | CAACAGCTAAGGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGGCTCTGCTTTCTCCTaGTGTGGTTGCTGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QQLRPKGSEVQVSKSEAQGSAFS*CGCCCP Trigger: TGGGCAGCAGCAACCACAGCAGGAGAAAGCAGAGCC...TTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCCTTAGCTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | CAACAGCTAAGGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAATTGTCTGGGGACTCCTaGTGCTGCAGGCTCCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QQLRPKGSEVQVSKSEAQLSGDS*CCRLPS Trigger: ACTAGGGAGCCTGCAGCAGCAGGAGTCCCCAGACAA...TTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCCTTAGCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGGTCTTCATCCTCAAGTaGTCTTCCTTGTCTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVQVRGPSPASDRPGVFILK*SSLSGD Trigger: GTCCCCAGACAAGGAAGAGCACTTGAGGATGAAGAC...CCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTAAGGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCTCGCTCCCAGGCTCTaGCCTTTTCTTCTTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLRPKGSEVQVSKSEAQVLAPRL*PFLLAF Trigger: GAAGGCAAGAAGAAAAGGGCAGAGCCTGGGAGCGAG...GACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCCTTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | CAACAGCTAAGGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCAGATCCCCATTCTaGGCTGCCAGCAGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQLRPKGSEVQVSKSEAQVRSPF*AASRIH Trigger: GTGGATCCTGCTGGCAGCCCAGAATGGGGATCTGAC...TTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCCTTAGCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR TCA 90 bp | CAACAGCTAAGGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAACTCCATGACTCTCTCTaGCCATACGGGCTACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQLRPKGSEVQVSKSEAQLHDSL*PYGLPQ Trigger: CTGAGGTAGCCCGTATGGTCAGAGAGAGTCATGGAG...TTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCCTTAGCTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCATAGGTTCAGCTCTCTaGGGCTTAGAGGAACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: EVQVSKSEAQVQRVTDQGIGSAL*GLEELL Trigger: CAGTAGTTCCTCTAAGCCCCAGAGAGCTGAACCTAT...GCCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | GGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGCAAGAAAATGAAGACTaGGCAAGGCAAGGATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLRVRKSKCPSQRPKSSEQENED*ARQGCD Trigger: GTCACATCCTTGCCTTGCCCAGTCTTCATTTTCTTG...CTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052167.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGTTTATTTATCTCCCAACTCTCCGCCCTTCTCTCTAAAATCAGAGCCCAACCGGGTATCCCGCGCTaGAAAGTGTGTGACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLFISQLSALLSKIRAQPGIPR*KVCDSG Trigger: CCCCGAGTCACACACTTTGCAGCGCGGGATACCCGG...TTGGGCTCTGATTTTAGAGAGAAGGGCGGAGAGTTGGGAGATAAATAAACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | GAAGTTTATTTATCTCCCAACTCTCCGCCCTTCTCTCTAAAATCAGAGCCCAACCCGGGTATCCCGCGCTaGAAAGTGTGTGACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVYLSPNSPPFSLKSEPNPGIPR*KVCDSG Trigger: CCCCGAGTCACACACTTTGCAGCGCGGGATACCCGG...GTTGGGCTCTGATTTTAGAGAGAAGGGCGGAGAGTTGGGAGATAAATAAACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGTTTATTTATCTCCCAACTCTCCGCCCTTCTCTCTAAAATCAGAGCCCAATCCTGCTGTGGTTGCTaGTGCCCATCCTTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLFISQLSALLSKIRAQSCCGC*CPSFQR Trigger: CCTCTGGAAGGATGGGCAGCAGCAACCACAGCAGGA...TTGGGCTCTGATTTTAGAGAGAAGGGCGGAGAGTTGGGAGATAAATAAACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR GCA 90 bp | GAAGTTTATTTATCTCCCAACTCTCCGCCCTTCTCTCTAAAATCAGAGCCCAACTCCTGCTGTGGTTGCTaGTGCCCATCCTTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVYLSPNSPPFSLKSEPNSCCGC*CPSFQR Trigger: CCTCTGGAAGGATGGGCAGCAGCAACCACAGCAGGA...GTTGGGCTCTGATTTTAGAGAGAAGGGCGGAGAGTTGGGAGATAAATAAACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR TCA 90 bp | GGAAGTTTATTTATCTCCCAACTCTCCGCCCTTCTCTCTAAAATCAGAGCCCAAGACAGTGACAGCAGGTaGGCAGTAGATGTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLFISQLSALLSKIRAQDSDSR*AVDVWW Trigger: CCACCACACATCTACTGCTCACCTGCTGTCACTGTC...TTGGGCTCTGATTTTAGAGAGAAGGGCGGAGAGTTGGGAGATAAATAAACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | GAAGTTTATTTATCTCCCAACTCTCCGCCCTTCTCTCTAAAATCAGAGCCCAACCAGTCCTCACAGAACTaGGACGAGGAGGGGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EVYLSPNSPPFSLKSEPNQSSQN*DEEGVD Trigger: ATCTACCCCCTCCTCGTCCCAGTTCTGTGAGGACTG...GTTGGGCTCTGATTTTAGAGAGAAGGGCGGAGAGTTGGGAGATAAATAAACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGGAAGTTTATTTATCTCCCAACTCTCCGCCCTTCTCTCTAAAATCAGAGGAAGGTTGGAGGGCTaGGGTCTCCTGGACAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KEGSLFISQLSALLSKIRGRLEG*GLLDSD Trigger: GTCACTGTCCAGGAGACCCCAGCCCTCCAACCTTCC...TCTGATTTTAGAGAGAAGGGCGGAGAGTTGGGAGATAAATAAACTTCCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165306.3 |
||
| CDS-3UTR TCA 90 bp | GGAAGTTTATTTATCTCCCAACTCTCCGCCCTTCTCTCTAAAATCAGAGCCCAACTTCTGTTCTCCCTCTaGCTCAGTGTGGCAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GSLFISQLSALLSKIRAQLLFSL*LSVATR Trigger: TCGAGTTGCCACACTGAGTCAGAGGGAGAACAGAAG...TTGGGCTCTGATTTTAGAGAGAAGGGCGGAGAGTTGGGAGATAAATAAACTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGGAAGTTTATTTATCTCCCAACTCTCCGCCCTTCTCTCTAAAATCAGAGCCAGCAGGATCCACTaGGCCATCCTGTCTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KEGSLFISQLSALLSKIRASRIH*AILSSS Trigger: GGATGAAGACAGGATGGCCCAGTGGATCCTGCTGGC...TCTGATTTTAGAGAGAAGGGCGGAGAGTTGGGAGATAAATAAACTTCCTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165306.3 |
||
| CDS-3UTR CCA 90 bp | GAAGTTTATTTATCTCCCAACTCTCCGCCCTTCTCTCTAAAATCAGAGCCCAACATAGGTTCAGCTCTCTaGGGCTTAGAGGAACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: EVYLSPNSPPFSLKSEPNIGSAL*GLEELL Trigger: CAGTAGTTCCTCTAAGCCCCAGAGAGCTGAACCTAT...GTTGGGCTCTGATTTTAGAGAGAAGGGCGGAGAGTTGGGAGATAAATAAACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS GCA 90 bp | GGCAGCTCCTCGGCCCAGGAGATAGCGCACAGCGGCGCCCTGGCCTaGTCGGGCAGCACACATCAAGGGAGTCCACCAGAAGGCATCACG | + |
|
Preference number: 5 (lower is better) Translates to: GSSSAQEIAHSGALA*SGSTHQGSPPEGIT Trigger: CGTGATGCCTTCTGGTGGACTCCCTTGATGTGTGCTGCCCGAGCAGGCCAGGGCGCCGCTGTGCGCTATCTCCTGGGCCGAGGAGCTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS TCA 90 bp | GGGCAGCACACATCAAGGGAGTCCACCAGAAGGCATCACGAGCATTaGTATTCCCTCCAGCTCCCCCTGCCTCTTGGGGTTCTAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQHTSRESTRRHHEH*YSLQLPLPLGVLAA Trigger: GGCTGCTAGAACCCCAAGAGGCAGGGGGAGCTGGAGGGAATATCAATGCTCGTGATGCCTTCTGGTGGACTCCCTTGATGTGTGCTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS GCA 90 bp | CTCTCCATGACTCTCTCTGACCATACGGGCTACCTCAGGGAAGCCTaGTTCTTCAGCCAGCTGGGCAGCATCTCTGCCTCCCAGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSMTLSDHTGYLREA*FFSQLGSISASQVT Trigger: TGTGACCTGGGAGGCAGAGATGCTGCCCAGCTGGCTGAAGAAGCAGGCTTCCCTGAGGTAGCCCGTATGGTCAGAGAGAGTCATGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS CCA 90 bp | CGGAGTTCTGTCAGATCCCCATTCTGGGCTGCCAGCAGGATCCACTaGGCCATCCTGTCTTCATCCTCAAGTGCTCTTCCTTGTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSVRSPFWAASRIH*AILSSSSSALPCLG Trigger: CCCCAGACAAGGAAGAGCACTTGAGGATGAAGACAGGATGGCCCAGTGGATCCTGCTGGCAGCCCAGAATGGGGATCTGACAGAACTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS CCA 90 bp | TCTTGGGGTTCTAGCAGCCTCCGGAGTTCTGTCAGATCCCCATTCTaGGCTGCCAGCAGGATCCACTGGGCCATCCTGTCTTCATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWGSSSLRSSVRSPF*AASRIHWAILSSSS Trigger: TGAGGATGAAGACAGGATGGCCCAGTGGATCCTGCTGGCAGCCCAGAATGGGGATCTGACAGAACTCCGGAGGCTGCTAGAACCCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS-3UTR CAA 90 bp | GGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACTCAAGTGCTCTTCCTaGTCTGGGGACTCCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GFGSPSVQVRGPSPASDRLKCSS*SGDSCC Trigger: GCAGCAGGAGTCCCCAGACAAGGAAGAGCACTTGAG...TCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS CCA 90 bp | AAGGCATCACGAGCATTGATATTCCCTCCAGCTCCCCCTGCCTCTTaGGGTTCTAGCAGCCTCCGGAGTTCTGTCAGATCCCCATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KASRALIFPPAPPAS*GSSSLRSSVRSPFW Trigger: CCAGAATGGGGATCTGACAGAACTCCGGAGGCTGCTAGAACCCCAAGAGGCAGGGGGAGCTGGAGGGAATATCAATGCTCGTGATGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS TCA 90 bp | ATCGGTTCTGGTTCTCAGGGCTCCTTGTCTCTCCATGACTCTCTCTaGCCATACGGGCTACCTCAGGGAAGCCTGCTTCTTCAGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IGSGSQGSLSLHDSL*PYGLPQGSLLLQPA Trigger: AGCTGGCTGAAGAAGCAGGCTTCCCTGAGGTAGCCCGTATGGTCAGAGAGAGTCATGGAGAGACAAGGAGCCCTGAGAACCAGAACCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS CCA 90 bp | CTCTGCCCTTTTCTTCTTGCCTTCTGTTCTCCCTCTGACTCAGTGTaGCAACTCGAGGGACTCTCTCTCTCCCAGACACAGCCCGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LCPFLLAFCSPSDSV*QLEGLSLSQTQPGY Trigger: ATACCCGGGCTGTGTCTGGGAGAGAGAGAGTCCCTCGAGTTGCCACACTGAGTCAGAGGGAGAACAGAAGGCAAGAAGAAAAGGGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CAA 90 bp | CAACAGCTAAGGCCTAAGGGTTCGGAAGTCCAAGTGTCCAAGTCAGAGGCCCAACTCAAGTGCTCTTCCTaGTCTGGGGACTCCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QQLRPKGSEVQVSKSEAQLKCSS*SGDSCC Trigger: GCAGCAGGAGTCCCCAGACAAGGAAGAGCACTTGAG...TTGGGCCTCTGACTTGGACACTTGGACTTCCGAACCCTTAGGCCTTAGCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGGTAGATGTGTGGTGGTaGGAGTCTTCAAAGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSPSVQVRGPSPASDRPGVDVWW*ESSKWA Trigger: TGCCCACTTTGAAGACTCCAACCACCACACATCTAC...CCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCGTAGATGTGTGGTGGTaGGAGTCTTCAAAGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EVQVSKSEAQVQRVTDQGVDVWW*ESSKWA Trigger: TGCCCACTTTGAAGACTCCAACCACCACACATCTAC...GCCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS-3UTR CAA 90 bp | AGTCCAAGTGTCCAAGTCAGAGGCCCAAGTCCAGCGAGTGACAGACCAGGGCCATCTGCCCTTTTCTTCTaGCCTTCTGTTCTCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSVQVRGPSPASDRPGPSALFF*PSVLPL Trigger: CAGAGGGAGAACAGAAGGCAAGAAGAAAAGGGCAGA...TGGCCCTGGTCTGTCACTCGCTGGACTTGGGCCTCTGACTTGGACACTTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 |
||
| CDS GCA 90 bp | GTCTTCATCCTCAAGTGCTCTTCCTTGTCTGGGGACTCCTGCTGCTaGAGGCTCCCTAGTCACTCTTCTTCTCTTCTTCTTCCTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VFILKCSSLSGDSCC*RLPSHSSSLLLPLP Trigger: AGGGAGAGGAAGAAGAAGAGAAGAAGAGTGACTAGGGAGCCTGCAGCAGCAGGAGTCCCCAGACAAGGAAGAGCACTTGAGGATGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS GCA 72 bp | TCGGCCCAGGAGATAGCGCACAGCGGCGCCCTGGCCTaGTCGGGCAGCACACATCAAGGGAGTCCACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SAQEIAHSGALA*SGSTHQGSPPE Trigger: TTCTGGTGGACTCCCTTGATGTGTGCTGCCCGAGCAGGCCAGGGCGCCGCTGTGCGCTATCTCCTGGGCCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS GCA 72 bp | CAGCCTCCGGAGTTCTGTCAGATCCCCATTCTGGGCTaGCAGCAGGATCCACTGGGCCATCCTGTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: QPPEFCQIPILG*QQDPLGHPVFI Trigger: GATGAAGACAGGATGGCCCAGTGGATCCTGCTGGCAGCCCAGAATGGGGATCTGACAGAACTCCGGAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS CCA 72 bp | TCTAGCAGCCTCCGGAGTTCTGTCAGATCCCCATTCTaGGCTGCCAGCAGGATCCACTGGGCCATCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSLRSSVRSPF*AASRIHWAILS Trigger: AGACAGGATGGCCCAGTGGATCCTGCTGGCAGCCCAGAATGGGGATCTGACAGAACTCCGGAGGCTGCTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS CAA 90 bp | CGGGCAGCACACATCAAGGGAGTCCACCAGAAGGCATCACGAGCATaGATATTCCCTCCAGCTCCCCCTGCCTCTTGGGGTTCTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAAHIKGVHQKASRA*IFPPAPPASWGSSS Trigger: GCTGCTAGAACCCCAAGAGGCAGGGGGAGCTGGAGGGAATATCAATGCTCGTGATGCCTTCTGGTGGACTCCCTTGATGTGTGCTGCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS CCA 72 bp | GTCAGATCCCCATTCTGGGCTGCCAGCAGGATCCACTaGGCCATCCTGTCTTCATCCTCAAGTGCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VRSPFWAASRIH*AILSSSSSALP Trigger: AGGAAGAGCACTTGAGGATGAAGACAGGATGGCCCAGTGGATCCTGCTGGCAGCCCAGAATGGGGATCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS TCA 72 bp | GGTTCTCAGGGCTCCTTGTCTCTCCATGACTCTCTCTaGCCATACGGGCTACCTCAGGGAAGCCTGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GSQGSLSLHDSL*PYGLPQGSLLL Trigger: AAGAAGCAGGCTTCCCTGAGGTAGCCCGTATGGTCAGAGAGAGTCATGGAGAGACAAGGAGCCCTGAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS GCA 72 bp | CTCAAGTGCTCTTCCTTGTCTGGGGACTCCTGCTGCTaGAGGCTCCCTAGTCACTCTTCTTCTCTTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LKCSSLSGDSCC*RLPSHSSSLLL Trigger: AAGAAGAAGAGAAGAAGAGTGACTAGGGAGCCTGCAGCAGCAGGAGTCCCCAGACAAGGAAGAGCACTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS GCA 72 bp | ATCCTCAAGTGCTCTTCCTTGTCTGGGGACTCCTGCTaGTGCAGGCTCCCTAGTCACTCTTCTTCTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILKCSSLSGDSC*CRLPSHSSSLL Trigger: AAGAAGAGAAGAAGAGTGACTAGGGAGCCTGCAGCAGCAGGAGTCCCCAGACAAGGAAGAGCACTTGAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 |
||
| CDS CCA 72 bp | CTCTTCTTCTTCCTCTCCCTCATAGGTTCAGCTCTCTaGGGCTTAGAGGAACTACTGTCATCTGCGATTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LFFFLSLIGSAL*GLEELLSSAIR Trigger: TCTAATCGCAGATGACAGTAGTTCCTCTAAGCCCCAGAGAGCTGAACCTATGAGGGAGAGGAAGAAGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052167.9 ENSMUST00000165306.3 ENSMUST00000173043.4 ENSMUST00000173380.2 |
||