Pregenerated sensors for GPALPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022008Ensembl transcript IDs: ENSMUST00000022585.5
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTGCAGCTGGAGTTACAGGGAGTGTGGACACCAGGTGTGGGTGCTaGGAACTGAGTCAGGTGATTTGCAAGAGCTGTACACGCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: RAAGVTGSVDTRCGC*ELSQVICKSCTRSA Trigger: GGCAGAGCGTGTACAGCTCTTGCAAATCACCTGACTCAGTTCCCAGCACCCACACCTGGTGTCCACACTCCCTGTAACTCCAGCTGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 90 bp | AGCAGCACAAGGCTCTGTATCTGCAGCCCAGACGAAGCCTCAGTATaGCAGCAGAAGTCAGGTAGGTGGTGCTTCGTGGTCTCTCATCTG | + |
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Preference number: 1 (lower is better) Translates to: SSTRLCICSPDEASV*QQKSGRWCFVVSHL Trigger: CAGATGAGAGACCACGAAGCACCACCTACCTGACTTCTGCTGCCATACTGAGGCTTCGTCTGGGCTGCAGATACAGAGCCTTGTGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR GCA 90 bp | CAGCCTTCAGATGAAGATGTTGAACTCTCTGCTCCTCCTGCACCATaGCTGTCTAGATGCTGCCATGCTCCCACCCTGATGCTAATGGAC | + |
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Preference number: 1 (lower is better) Translates to: QPSDEDVELSAPPAP*LSRCCHAPTLMLMD Trigger: GTCCATTAGCATCAGGGTGGGAGCATGGCAGCATCTAGACAGGCATGGTGCAGGAGGAGCAGAGAGTTCAACATCTTCATCTGAAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR TCA 90 bp | CATCTTCCCCTACTACTAAAACCAACCGTCTGCTCACCAGTGATGTaGATACTGTTTGAGGCTGAGCAGTCGGACCTGGACAAGGCCATC | + |
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Preference number: 1 (lower is better) Translates to: HLPLLLKPTVCSPVM*ILFEAEQSDLDKAI Trigger: GATGGCCTTGTCCAGGTCCGACTGCTCAGCCTCAAACAGTATTCACATCACTGGTGAGCAGACGGTTGGTTTTAGTAGTAGGGGAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR GCA 90 bp | CAACCAAACAAAAAGCTCTTCTACAGCAGCACAAGGCTCTGTATCTaGAGCCCAGACGAAGCCTCAGTATGGCAGCAGAAGTCAGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: QPNKKLFYSSTRLCI*SPDEASVWQQKSGR Trigger: CCTACCTGACTTCTGCTGCCATACTGAGGCTTCGTCTGGGCTGCAGATACAGAGCCTTGTGCTGCTGTAGAAGAGCTTTTTGTTTGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR GCA 90 bp | TTAAAAAGAGGCTGGAGAAATGGCTCAGCAGTTAAGAACACCGACTaGTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATTGT | + |
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Preference number: 1 (lower is better) Translates to: LKRGWRNGSAVKNTD*SSKGPEFKSQQPHC Trigger: ACAATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCGGTGTTCTTAACTGCTGAGCCATTTCTCCAGCCTCTTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 90 bp | AAACGGCTACAAGGAGTATACAACCTTTCAACCTTGTACACACCATaGTCACAGTTAAACAATTTCTGGGTGGTGCTGAGAACTGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: KRLQGVYNLSTLYTP*SQLNNFWVVLRTGD Trigger: ATCCCCAGTTCTCAGCACCACCCAGAAATTGTTTAACTGTGACCATGGTGTGTACAAGGTTGAAAGGTTGTATACTCCTTGTAGCCGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR GCA 90 bp | GCATTGCTTACAGCACTAAACCATATAATACTCCCACTGGGTGGTTaGGAGTACAGATTCCCCATTTCCAGTGATTATTTGGTTATTTTT | + |
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Preference number: 1 (lower is better) Translates to: ALLTALNHIILPLGG*EYRFPISSDYLVIF Trigger: AAAAATAACCAAATAATCACTGGAAATGGGGAATCTGTACTCGCAACCACCCAGTGGGAGTATTATATGGTTTAGTGCTGTAAGCAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CAA 90 bp | TGTTTGAGGCTGAGCAGTCGGACCTGGACAAGGCCATCCAGGGAATaGATGGCCAACGTTAGTGGTGAGACACCAGGGTTTGACCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: CLRLSSRTWTRPSRE*MANVSGETPGFDLV Trigger: CACCAGGTCAAACCCTGGTGTCTCACCACTAACGTTGGCCATCAATTCCCTGGATGGCCTTGTCCAGGTCCGACTGCTCAGCCTCAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CAA 90 bp | ACTTGGGGACAGAGGCAGGTGGGTCTCTGGGAGTTTGAGGCCAGCTaGCTAGTAGTATACACAGTGAGTTCTGGGCCAGCCAAGGTTACA | + |
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Preference number: 2 (lower is better) Translates to: TWGQRQVGLWEFEAS*LVVYTVSSGPAKVT Trigger: TGTAACCTTGGCTGGCCCAGAACTCACTGTGTATACTACTAGCAAGCTGGCCTCAAACTCCCAGAGACCCACCTGCCTCTGTCCCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTGTCACTGTGGGTGTGAGTTTTAAGACCCTCATCCTAACAGTATTCTGCGGGGACAGAGGCAGGTaGGTCTCTGGGAGTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: RCVTVGVSFKTLILTVFCGDRGR*VSGSLR Trigger: CCTCAAACTCCCAGAGACCCACCTGCCTCTGTCCCC...GCAGAATACTGTTAGGATGAGGGTCTTAAAACTCACACCCACAGTGACACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR GCA 90 bp | TATGTCTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTCCATGCCTGTCTAGATaGTGCCATGCTCCCACCCTG | + |
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Preference number: 2 (lower is better) Translates to: YVSMWPNLPGNGIYFTATPCLSR*CHAPTL Trigger: CAGGGTGGGAGCATGGCAGCATCTAGACAGGCATGG...AGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAGACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR GCA 90 bp | CTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATGCACTGGCTCCAGGGTaGCAGCGAGGTAATCATACA | + |
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Preference number: 2 (lower is better) Translates to: LHVAKPPWKWHILYCNCHALAPG*QRGNHT Trigger: TGTATGATTACCTCGCTGGCACCCTGGAGCCAGTGC...ATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR TCA 90 bp | TCTTGGATTTTTGAGACAGGGTCTCTCTACACAGCACTGGATGTCCTGGAATTCGCACACCACACTCTGTaGAGAGCCCTTTCTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SWIFETGSLYTALDVLEFAHHTL*RALSLH Trigger: ATGAAGAGAAAGGGCTCTTCACAGAGTGTGGTGTGC...GAATTCCAGGACATCCAGTGCTGTGTAGAGAGACCCTGTCTCAAAAATCCAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGGTAGAGAGTATACAGTCTCACCCAGAACTAAGGAAACATGTAAGACACGGGTCTCTGGGAGTTTaGGGCCAGCTTGCTAGTAGT | + |
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Preference number: 2 (lower is better) Translates to: TVVESIQSHPELRKHVRHGSLGV*GQLASS Trigger: ACTACTAGCAAGCTGGCCTCAAACTCCCAGAGACCC...GTGTCTTACATGTTTCCTTAGTTCTGGGTGAGACTGTATACTCTCTACCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR CCA 90 bp | TATGTCTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTTTTAATCCCAGCACTTaGGGACAGAGGCAGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: YVSMWPNLPGNGIYFTATFNPST*GQRQVG Trigger: ACCCACCTGCCTCTGTCCCCAAGTGCTGGGATTAAA...AGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAGACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR TCA 90 bp | TATGTCTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGCCAAGGTTACACAGTaGGACCCCGTCTCAAAAATC | + |
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Preference number: 2 (lower is better) Translates to: YVSMWPNLPGNGIYFTATAKVTQ*DPVSKI Trigger: GATTTTTGAGACGGGGTCTCACTGTGTAACCTTGGC...AGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAGACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTGTCACTGTGGGTGTGAGTTTTAAGACCCTCATCCTAACAGTATTCTGCATACACAGTGAGTTCTaGGCCAGCCAAGGTTACACA | + |
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Preference number: 2 (lower is better) Translates to: RCVTVGVSFKTLILTVFCIHSEF*ASQGYT Trigger: TGTGTAACCTTGGCTGGCCCAGAACTCACTGTGTAT...GCAGAATACTGTTAGGATGAGGGTCTTAAAACTCACACCCACAGTGACACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR TCA 90 bp | CACGAGGAACTTAAGAAGCATCCTCAGCTCTCACACAATTCCTTAACCAACATCGACAAAGGTATATTCTaGGGGGTTCAGGCTGATCAG | + |
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Preference number: 2 (lower is better) Translates to: HEELKKHPQLSHNSLTNIDKGIF*GVQADQ Trigger: CTGATCAGCCTGAACCCCTCAGAATATACCTTTGTC...GATGTTGGTTAAGGAATTGTGTGAGAGCTGAGGATGCTTCTTAAGTTCCTCGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR TCA 90 bp | TATGTCTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGCTTTGGTGAGACCATaGAGACAGCATCCTAGACTT | + |
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Preference number: 2 (lower is better) Translates to: YVSMWPNLPGNGIYFTATALVRP*RQHPRL Trigger: AAGTCTAGGATGCTGTCTTCATGGTCTCACCAAAGC...AGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAGACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR TCA 90 bp | TCTTGGATTTTTGAGACAGGGTCTCTCTACACAGCACTGGATGTCCTGGAATTCGCCCTTTCTCTTCATTaGAACCCTTTTCTAGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: SWIFETGSLYTALDVLEFALSLH*NPFLVA Trigger: TGCTACTAGAAAAGGGTTTCAATGAAGAGAAAGGGC...GAATTCCAGGACATCCAGTGCTGTGTAGAGAGACCCTGTCTCAAAAATCCAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR CCA 90 bp | CACGAGGAACTTAAGAAGCATCCTCAGCTCTCACACAATTCCTTAACCAACATCGGACCCATGGGATTATaGATATTTAAGGCGTACCAG | + |
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Preference number: 2 (lower is better) Translates to: HEELKKHPQLSHNSLTNIGPMGL*IFKAYQ Trigger: CTGGTACGCCTTAAATATCCATAATCCCATGGGTCC...GATGTTGGTTAAGGAATTGTGTGAGAGCTGAGGATGCTTCTTAAGTTCCTCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR CCA 90 bp | TATGTCTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTGTCATTTTGTACATaGGCACAGATGACCATGGAC | + |
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Preference number: 2 (lower is better) Translates to: YVSMWPNLPGNGIYFTATVSFCT*AQMTMD Trigger: GTCCATGGTCATCTGTGCCCATGTACAAAATGACAC...AGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAGACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR TCA 90 bp | TGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATCTGGGTATTTTTCTTGGATTTTTaGGACAGGGTCTCTCTACAC | + |
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Preference number: 2 (lower is better) Translates to: WPNLPGNGIYFTATVIWVFFLDF*DRVSLH Trigger: GTGTAGAGAGACCCTGTCTCAAAAATCCAAGAAAAA...TACCCAGATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR TCA 72 bp | GCCAGGGGTTGCAGGGCTGCTTTTATTAGGAAATGCTaGCTGTCAGGGCAGTGGACTCCAGCAGGCCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: ARGCRAAFIRKC*LSGQWTPAGLC Trigger: GCAGAGGCCTGCTGGAGTCCACTGCCCTGACAGTCAGCATTTCCTAATAAAAGCAGCCCTGCAACCCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR GCA 72 bp | ACCAGGTGTGGGTGCTGGGAACTGAGTCAGGTGATTTaGAAGAGCTGTACACGCTCTGCCGACAGCTACCTC | + |
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Preference number: 3 (lower is better) Translates to: TRCGCWELSQVI*KSCTRSADSYL Trigger: GAGGTAGCTGTCGGCAGAGCGTGTACAGCTCTTGCAAATCACCTGACTCAGTTCCCAGCACCCACACCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 72 bp | AGGCTCTGTATCTGCAGCCCAGACGAAGCCTCAGTATaGCAGCAGAAGTCAGGTAGGTGGTGCTTCGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: RLCICSPDEASV*QQKSGRWCFVV Trigger: GACCACGAAGCACCACCTACCTGACTTCTGCTGCCATACTGAGGCTTCGTCTGGGCTGCAGATACAGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR TCA 72 bp | CACTTGGGGACAGAGGCAGGTGGGTCTCTGGGAGTTTaGGGCCAGCTTGCTAGTAGTATACACAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: HLGTEAGGSLGV*GQLASSIHSEF Trigger: GAACTCACTGTGTATACTACTAGCAAGCTGGCCTCAAACTCCCAGAGACCCACCTGCCTCTGTCCCCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 72 bp | GGAGTTACAGGGAGTGTGGACACCAGGTGTGGGTGCTaGGAACTGAGTCAGGTGATTTGCAAGAGCTGTACA | + |
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Preference number: 3 (lower is better) Translates to: GVTGSVDTRCGC*ELSQVICKSCT Trigger: TGTACAGCTCTTGCAAATCACCTGACTCAGTTCCCAGCACCCACACCTGGTGTCCACACTCCCTGTAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 72 bp | GGCTTTTCTAGAAGCACCAATAACACCATGGAGAAGTaGAAGCGGACGAGGCCTCGAGCTTATGAGCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: GFSRSTNNTMEK*KRTRPRAYELC Trigger: GCAGAGCTCATAAGCTCGAGGCCTCGTCCGCTTCCACTTCTCCATGGTGTTATTGGTGCTTCTAGAAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 72 bp | CCTGGAGAGGCTTTTCTAGAAGCACCAATAACACCATaGAGAAGTGGAAGCGGACGAGGCCTCGAGCTTATG | + |
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Preference number: 3 (lower is better) Translates to: PGEAFLEAPITP*RSGSGRGLELM Trigger: CATAAGCTCGAGGCCTCGTCCGCTTCCACTTCTCCATGGTGTTATTGGTGCTTCTAGAAAAGCCTCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 72 bp | GTCACAGTTAAACAATTTCTGGGTGGTGCTGAGAACTaGGGATGGAGCCAGGACTTCACGCTCACCCACATG | + |
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Preference number: 3 (lower is better) Translates to: VTVKQFLGGAEN*GWSQDFTLTHM Trigger: CATGTGGGTGAGCGTGAAGTCCTGGCTCCATCCCCAGTTCTCAGCACCACCCAGAAATTGTTTAACTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR GCA 72 bp | AGGCTGGCCTTGAGCTTACATAGATATGCCTGCCTCTaGCTTCCAAGTGCTGGGATTAAAGGCACTCATGAC | + |
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Preference number: 3 (lower is better) Translates to: RLALSLHRYACL*LPSAGIKGTHD Trigger: GTCATGAGTGCCTTTAATCCCAGCACTTGGAAGGCAGAGGCAGGCATATCTATGTAAGCTCAAGGCCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 72 bp | GCCCAGAGAGTGGCACTATTAGAAGGTGTGGCCTGTTaGAGTAGGTGTGTCACTGTGGGTGTGAGTTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: AQRVALLEGVAC*SRCVTVGVSFK Trigger: CTTAAAACTCACACCCACAGTGACACACCTACTCCAACAGGCCACACCTTCTAATAGTGCCACTCTCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR TCA 72 bp | CTACTACTAAAACCAACCGTCTGCTCACCAGTGATGTaGATACTGTTTGAGGCTGAGCAGTCGGACCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: LLLKPTVCSPVM*ILFEAEQSDLD Trigger: GTCCAGGTCCGACTGCTCAGCCTCAAACAGTATTCACATCACTGGTGAGCAGACGGTTGGTTTTAGTAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR GCA 72 bp | GGCTGGAGAAATGGCTCAGCAGTTAAGAACACCGACTaGTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GWRNGSAVKNTD*SSKGPEFKSQQ Trigger: TTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCGGTGTTCTTAACTGCTGAGCCATTTCTCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 72 bp | GTTTTCCCTGTGGAGGCCAATCTGAAAGTCTTATCCTaGGTTGGCCAGGTCCTCTCTTGTTTTAGTCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: VFPVEANLKVLS*VGQVLSCFSPS Trigger: TGAGGGACTAAAACAAGAGAGGACCTGGCCAACCCAGGATAAGACTTTCAGATTGGCCTCCACAGGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR TCA 72 bp | TACACAGTGAGTTCTGGGCCAGCCAAGGTTACACAGTaGGACCCCGTCTCAAAAATCAACAAGCAAGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: YTVSSGPAKVTQ*DPVSKINKQVN Trigger: GTTCACTTGCTTGTTGATTTTTGAGACGGGGTCTCACTGTGTAACCTTGGCTGGCCCAGAACTCACTGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR TCA 72 bp | CCAGCAGGCCTCTGCTCTTTGGAAGATGGGATGATATaGGGAACATCTTTCTGTAATGCACACAGAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: PAGLCSLEDGMI*GTSFCNAHRAA Trigger: AGCAGCTCTGTGTGCATTACAGAAAGATGTTCCTCATATCATCCCATCTTCCAAAGAGCAGAGGCCTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR TCA 72 bp | GGACTCCAGCAGGCCTCTGCTCTTTGGAAGATGGGATaGTATGAGGAACATCTTTCTGTAATGCACACAGAG | + |
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Preference number: 3 (lower is better) Translates to: GLQQASALWKMG*YEEHLSVMHTE Trigger: CTCTGTGTGCATTACAGAAAGATGTTCCTCATATCATCCCATCTTCCAAAGAGCAGAGGCCTGCTGGAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR CAA 90 bp | CTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATCTTCAGATGAAGATGTaGAACTCTCTGCTCCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LHVAKPPWKWHILYCNCHLQMKM*NSLLLL Trigger: CAGGAGGAGCAGAGAGTTCAACATCTTCATCTGAAG...ATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR CAA 90 bp | CTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATAGTCTGAGTGTCATTTaGTACATGGGCACAGATGAC | + |
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Preference number: 3 (lower is better) Translates to: LHVAKPPWKWHILYCNCHSLSVI*YMGTDD Trigger: GTCATCTGTGCCCATGTACAAAATGACACTCAGACT...ATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR CAA 90 bp | AGGTGTGTCACTGTGGGTGTGAGTTTTAAGACCCTCATCCTAACAGTATTCTGCAGCCCTTTCTCTTCATaGAAACCCTTTTCTAGTAGC | + |
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Preference number: 3 (lower is better) Translates to: RCVTVGVSFKTLILTVFCSPFSS*KPFSSS Trigger: GCTACTAGAAAAGGGTTTCAATGAAGAGAAAGGGCT...GCAGAATACTGTTAGGATGAGGGTCTTAAAACTCACACCCACAGTGACACACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR TCA 72 bp | AGTAAGCATAGTACAGATATTCCTAACCCCTTCCACTaGGAAAGCAAGGCCAATGAGTGTCCAGAAGTGGTA | + |
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Preference number: 3 (lower is better) Translates to: SKHSTDIPNPFH*ESKANECPEVV Trigger: TACCACTTCTGGACACTCATTGGCCTTGCTTTCTCAGTGGAAGGGGTTAGGAATATCTGTACTATGCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 72 bp | TGTTTTTCTAACTGTAATGTTGTTCAAAGAACGGTATaGTGGCACTCACCTTTAATCCCAGCACTTGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: CFSNCNVVQRTV*WHSPLIPALGD Trigger: GTCCCCAAGTGCTGGGATTAAAGGTGAGTGCCACCATACCGTTCTTTGAACAACATTACAGTTAGAAAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 72 bp | CAAGGAGTATACAACCTTTCAACCTTGTACACACCATaGTCACAGTTAAACAATTTCTGGGTGGTGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: QGVYNLSTLYTP*SQLNNFWVVLR Trigger: TCTCAGCACCACCCAGAAATTGTTTAACTGTGACCATGGTGTGTACAAGGTTGAAAGGTTGTATACTCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR-3UTR CAA 90 bp | TATGTCTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTATAATGTCCTTCAGATaGCCTCCCCTACAAATATTT | + |
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Preference number: 3 (lower is better) Translates to: YVSMWPNLPGNGIYFTATIMSFR*PPLQIF Trigger: AAATATTTGTAGGGGAGGCAATCTGAAGGACATTAT...AGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAGACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR TCA 72 bp | AAAGGACAGAATAAATACTCCTTTTTCTTGGATTTTTaGGACAGGGTCTCTCTACACAGCACTGGATGTCCT | + |
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Preference number: 3 (lower is better) Translates to: KGQNKYSFFLDF*DRVSLHSTGCP Trigger: AGGACATCCAGTGCTGTGTAGAGAGACCCTGTCTCAAAAATCCAAGAAAAAGGAGTATTTATTCTGTCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| 3UTR CCA 72 bp | CATGTAACAGCGAATGATTTATGTGACTCTGAAACATaGAAGGCTCAGATCTATACACATAGCAATCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: HVTANDLCDSET*KAQIYTHSNLT Trigger: TGTGAGATTGCTATGTGTATAGATCTGAGCCTTCCATGTTTCAGAGTCACATAAATCATTCGCTGTTACATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| 3UTR TCA 72 bp | TGCACCACTGTCATGTATTTCACAATGGTATCAACATaGTTAGTCTGCATAAGAACCATAGTATCATGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: CTTVMYFTMVST*LVCIRTIVSCN Trigger: GTTACATGATACTATGGTTCTTATGCAGACTAATCATGTTGATACCATTGTGAAATACATGACAGTGGTGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR GCA 90 bp | AGGTGTGTCACTGTGGGTGTGAGTTTTAAGACCCTCATCCTAACAGTATTCTGCGGGCAGAGCTGGCCCTaGAACCGGGCTCGGGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RCVTVGVSFKTLILTVFCGQSWP*NRARVP Trigger: CGGGACCCGAGCCCGGTTGCAGGGCCAGCTCTGCCC...GCAGAATACTGTTAGGATGAGGGTCTTAAAACTCACACCCACAGTGACACACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| 3UTR CAA 72 bp | CACCAGGTGTGGGTGCTGGGAACTGAGTCAGGTGATTaGCAAGAGCTGTACACGCTCTGCCGACAGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: HQVWVLGTESGD*QELYTLCRQLP Trigger: AGGTAGCTGTCGGCAGAGCGTGTACAGCTCTTGCAAATCACCTGACTCAGTTCCCAGCACCCACACCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR GCA 90 bp | CTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATGAAGCCTGGCGGCAGTaGCGGCCCGATCAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHVAKPPWKWHILYCNCHEAWRQ*RPDQVP Trigger: AGGGACCTGATCGGGCCGGCACTGCCGCCAGGCTTC...ATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| 3UTR CAA 72 bp | GGATTTGCAAGGGCCTGTGTGATGGTTTGTATGTGCTaGGCCCAGAGAGTGGCACTATTAGAAGGTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GFARACVMVCMC*AQRVALLEGVA Trigger: GGCCACACCTTCTAATAGTGCCACTCTCTGGGCCAAGCACATACAAACCATCACACAGGCCCTTGCAAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR TCA 90 bp | AGGTGTGTCACTGTGGGTGTGAGTTTTAAGACCCTCATCCTAACAGTATTCTGCCTGCTTCCTCTGAGTTaGAGAATGATGACACTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RCVTVGVSFKTLILTVFCLLPLS*RMMTLA Trigger: GGCAAGTGTCATCATTCTTCAACTCAGAGGAAGCAG...GCAGAATACTGTTAGGATGAGGGTCTTAAAACTCACACCCACAGTGACACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR GCA 90 bp | CTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATGCCCTGGATCCTCTCTaGCTTTGTCATTTTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHVAKPPWKWHILYCNCHALDPL*LCHFSV Trigger: CACAGAAAAATGACAAAGGCAGAGAGGATCCAGGGC...ATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CCA 90 bp | CTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATGACGCTATAGTTAACTaGTCCTTTTGCAGGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHVAKPPWKWHILYCNCHDAIVN*SFCRHW Trigger: CCAATGCCTGCAAAAGGACCAGTTAACTATAGCGTC...ATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| 3UTR CAA 72 bp | TGCACACCACACTCTGTGAAGAGCCCTTTCTCTTCATaGAAACCCTTTTCTAGTAGCAATGTTCTGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTPHSVKSPFSS*KPFSSSNVLLG Trigger: GCCCAACAGAACATTGCTACTAGAAAAGGGTTTCAATGAAGAGAAAGGGCTCTTCACAGAGTGTGGTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR GCA 90 bp | GACACTCAACTTACAGAGGCCTTCTGGAGCAATGCATGTTTTTCTAACTGTAATGAAACCAGGTGGCAATaGGGGACCTATTATAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTQLTEAFWSNACFSNCNETRWQ*GTYYRP Trigger: AGGCCTATAATAGGTCCCGCATTGCCACCTGGTTTC...ATTACAGTTAGAAAAACATGCATTGCTCCAGAAGGCCTCTGTAAGTTGAGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR GCA 90 bp | CACGAGGAACTTAAGAAGCATCCTCAGCTCTCACACAATTCCTTAACCAACATCTTGTATGAGGATACTTaGTCGGCCAGTCTCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: HEELKKHPQLSHNSLTNILYEDT*SASLLS Trigger: GGATAAGAGACTGGCCGAGCAAGTATCCTCATACAA...GATGTTGGTTAAGGAATTGTGTGAGAGCTGAGGATGCTTCTTAAGTTCCTCGTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CCA 90 bp | TGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATCTGGGTATCCTTTTGCAGGCATTaGTCCAACAATATCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: WPNLPGNGIYFTATVIWVSFCRH*SNNILI Trigger: GATGAGGATATTGTTGGACCAATGCCTGCAAAAGGA...TACCCAGATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CCA 90 bp | CTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATTTCTTTCATTTCTGGTaGAAGCTCAGTCATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHVAKPPWKWHILYCNCHFFHFW*KLSHPG Trigger: TCCTGGATGACTGAGCTTCCACCAGAAATGAAAGAA...ATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR GCA 90 bp | GACACTCAACTTACAGAGGCCTTCTGGAGCAATGCATGTTTTTCTAACTGTAATAAGAATGATGACACTTaGCCTGGATCCTCTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTQLTEAFWSNACFSNCNKNDDT*PGSSLP Trigger: AGGCAGAGAGGATCCAGGGCAAGTGTCATCATTCTT...ATTACAGTTAGAAAAACATGCATTGCTCCAGAAGGCCTCTGTAAGTTGAGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR GCA 90 bp | TCTTGGATTTTTGAGACAGGGTCTCTCTACACAGCACTGGATGTCCTGGAATTCGGTATTCTCTCCTGGTaGTTGTTTTTATCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWIFETGSLYTALDVLEFGILSW*LFLSSA Trigger: TGCTGAAGATAAAAACAAGCACCAGGAGAGAATACC...GAATTCCAGGACATCCAGTGCTGTGTAGAGAGACCCTGTCTCAAAAATCCAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGTCACTGTGGGTGTGAGTTTTAAGACCCTCATCCTAACAGTATTCTGCTTTATCACGGTCAAATaGTATTCTCTCCTGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RCVTVGVSFKTLILTVFCFITVK*YSLLVL Trigger: AAGCACCAGGAGAGAATACCATTTGACCGTGATAAA...GCAGAATACTGTTAGGATGAGGGTCTTAAAACTCACACCCACAGTGACACACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR TCA 90 bp | TCTTGGATTTTTGAGACAGGGTCTCTCTACACAGCACTGGATGTCCTGGAATTCTCTTCTTCAGACTCTTaGTTGCCTTCTTCAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SWIFETGSLYTALDVLEFSSSDS*LPSSDK Trigger: TTTATCTGAAGAAGGCAATCAAGAGTCTGAAGAAGA...GAATTCCAGGACATCCAGTGCTGTGTAGAGAGACCCTGTCTCAAAAATCCAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR TCA 90 bp | TCTTGGATTTTTGAGACAGGGTCTCTCTACACAGCACTGGATGTCCTGGAATTCCTTCATCTTTCTTACTaGATGACTTCCTTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SWIFETGSLYTALDVLEFLHLSY*MTSLLL Trigger: AAGAAGCAAGGAAGTCATTCAGTAAGAAAGATGAAG...GAATTCCAGGACATCCAGTGCTGTGTAGAGAGACCCTGTCTCAAAAATCCAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR GCA 90 bp | AGGTGTGTCACTGTGGGTGTGAGTTTTAAGACCCTCATCCTAACAGTATTCTGCCTTCAGACTCTTGATTaGCTTCTTCAGATAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RCVTVGVSFKTLILTVFCLQTLD*LLQIKN Trigger: GTTCTTTATCTGAAGAAGGCAATCAAGAGTCTGAAG...GCAGAATACTGTTAGGATGAGGGTCTTAAAACTCACACCCACAGTGACACACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR GCA 90 bp | ACTGTGGTAGAGAGTATACAGTCTCACCCAGAACTAAGGAAACATGTAAGACACAAAACATGTTGCCTTTaGCATGTGAAAACCGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVVESIQSHPELRKHVRHKTCCL*HVKTGC Trigger: ACACCCGGTTTTCACATGGCAAAGGCAACATGTTTT...GTGTCTTACATGTTTCCTTAGTTCTGGGTGAGACTGTATACTCTCTACCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| 3UTR CAA 72 bp | CTCATTAGGAGTGTCTGTTTAACAGCTCAAGAGGCATaGCTTACAGCACTAAACCATATAATACTCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LIRSVCLTAQEA*LTALNHIILPL Trigger: CAGTGGGAGTATTATATGGTTTAGTGCTGTAAGCAATGCCTCTTGAGCTGTTAAACAGACACTCCTAATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CCA 90 bp | GACACTCAACTTACAGAGGCCTTCTGGAGCAATGCATGTTTTTCTAACTGTAATCTTAATGAAACCAGGTaGCAATGCGGGACCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: DTQLTEAFWSNACFSNCNLNETR*QCGTYY Trigger: ATAATAGGTCCCGCATTGCCACCTGGTTTCATTAAG...ATTACAGTTAGAAAAACATGCATTGCTCCAGAAGGCCTCTGTAAGTTGAGTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGTAGAGAGTATACAGTCTCACCCAGAACTAAGGAAACATGTAAGACACTCTCTTAAAGGTTCTTaGCCCCAGACCAAATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVVESIQSHPELRKHVRHSLKGS*PQTKFF Trigger: AAAGAATTTGGTCTGGGGCCAAGAACCTTTAAGAGA...GTGTCTTACATGTTTCCTTAGTTCTGGGTGAGACTGTATACTCTCTACCACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CCA 90 bp | CTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATAATGGTATTCTCTCCTaGTGCTTGTTTTTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHVAKPPWKWHILYCNCHNGILS*CLFLSS Trigger: TGAAGATAAAAACAAGCACCAGGAGAGAATACCATT...ATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGTAGAGAGTATACAGTCTCACCCAGAACTAAGGAAACATGTAAGACACTCTCTTATCCCTTCCTaGCAATATGTTTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TVVESIQSHPELRKHVRHSLIPS*QYVFFI Trigger: GATGAAGAAAACATATTGTCAGGAAGGGATAAGAGA...GTGTCTTACATGTTTCCTTAGTTCTGGGTGAGACTGTATACTCTCTACCACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGTAGAGAGTATACAGTCTCACCCAGAACTAAGGAAACATGTAAGACACTATGATGAATGTCCATaGGGGATTCTGATCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVVESIQSHPELRKHVRHYDECP*GILIFL Trigger: CAAAAAGATCAGAATCCCTCATGGACATTCATCATA...GTGTCTTACATGTTTCCTTAGTTCTGGGTGAGACTGTATACTCTCTACCACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR GCA 90 bp | GCCTTCTGGAGCAATGCATGTTTTTCTAACTGTAATGTTGTTCAAAGAACGGTAGTTAACTGGTCCTTTTaGAGGCATTGGTCCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFWSNACFSNCNVVQRTVVNWSF*RHWSNN Trigger: ATTGTTGGACCAATGCCTGCAAAAGGACCAGTTAAC...TACCGTTCTTTGAACAACATTACAGTTAGAAAAACATGCATTGCTCCAGAAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| 3UTR CAA 72 bp | AAGATTATTTTTAAAGTTATGAGTCTGAGTGTCATTTaGTACATGGGCACAGATGACCATGGACCCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KIIFKVMSLSVI*YMGTDDHGPQE Trigger: CTCTTGGGGTCCATGGTCATCTGTGCCCATGTACAAAATGACACTCAGACTCATAACTTTAAAAATAATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CCA 90 bp | GCCTTCTGGAGCAATGCATGTTTTTCTAACTGTAATGTTGTTCAAAGAACGGTAGGGTGTTTAGTTCTCTaGATTTCTTTATTAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AFWSNACFSNCNVVQRTVGCLVL*ISLLGL Trigger: AAGCCCTAATAAAGAAATCCAGAGAACTAAACACCC...TACCGTTCTTTGAACAACATTACAGTTAGAAAAACATGCATTGCTCCAGAAGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS GCA 90 bp | CCTGCAACCGGGCTCGGGTCCCGTTCCTCGTCCTCAACTGTCGCGTaGTCCTTGAAGCCTGGCGGCAGTGCCGGCCCGATCAGGTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: PATGLGSRSSSSTVA*SLKPGGSAGPIRSL Trigger: TAGGGACCTGATCGGGCCGGCACTGCCGCCAGGCTTCAAGGAGCACGCGACAGTTGAGGACGAGGAACGGGACCCGAGCCCGGTTGCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CAA 90 bp | CCGTGCAGCTGGAGTTACAGGGAGTGTGGACACCAGGTGTGGGTGCTGGGAACTTTCGCCTCTGCTTTTTaGCATTTGGACCAGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PCSWSYRECGHQVWVLGTFASAF*HLDQCP Trigger: AGGACACTGGTCCAAATGCAAAAAAGCAGAGGCGAA...AGTTCCCAGCACCCACACCTGGTGTCCACACTCCCTGTAACTCCAGCTGCACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS CCA 90 bp | CTTCCTTGCTTCTTGTATTTCCTTAGCTTTCCTCTCCCGGTCAGCTaGGGTGTCTGTCCAGACGGATCGGTCTCCGGATTTGTCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPCFLYFLSFPLPVS*GVCPDGSVSGFVIC Trigger: GCAGATGACAAATCCGGAGACCGATCCGTCTGGACAGACACCCCAGCTGACCGGGAGAGGAAAGCTAAGGAAATACAAGAAGCAAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS GCA 90 bp | AGCTGGGGTGTCTGTCCAGACGGATCGGTCTCCGGATTTGTCATCTaGTCTTCTCTTAAAGGTTCTTGGCCCCAGACCAAATTCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SWGVCPDGSVSGFVI*SSLKGSWPQTKFFH Trigger: ATGAAAGAATTTGGTCTGGGGCCAAGAACCTTTAAGAGAAGAGCAGATGACAAATCCGGAGACCGATCCGTCTGGACAGACACCCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS CCA 90 bp | CTCTCTGCCTTTGTCATTTTTCTGTGGAGACTTAATGAAACCAGGTaGCAATGCGGGACCTATTATAGGCCTGGGAGGAGAGTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSAFVIFLWRLNETR*QCGTYYRPGRRVIL Trigger: CAGGATGACTCTCCTCCCAGGCCTATAATAGGTCCCGCATTGCCACCTGGTTTCATTAAGTCTCCACAGAAAAATGACAAAGGCAGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CAA 90 bp | CTCCATGTGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATGATCGGTCTCCGGATTaGTCATCTGCTCTTCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LHVAKPPWKWHILYCNCHDRSPD*SSALLL Trigger: TAAGAGAAGAGCAGATGACAAATCCGGAGACCGATC...ATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCACATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CAA 90 bp | TGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATCTGGGTATCTGCTTCCTCTGAGTaGAAGAATGATGACACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WPNLPGNGIYFTATVIWVSASSE*KNDDTC Trigger: GCAAGTGTCATCATTCTTCAACTCAGAGGAAGCAGA...TACCCAGATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CAA 90 bp | TGGCCAAACCTCCCTGGAAATGGCATATACTTTACTGCAACTGTCATCTGGGTAAAAAACATGTTGCCTTaGCCATGTGAAAACCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPNLPGNGIYFTATVIWVKNMLP*PCENRV Trigger: CACCCGGTTTTCACATGGCAAAGGCAACATGTTTTT...TACCCAGATGACAGTTGCAGTAAAGTATATGCCATTTCCAGGGAGGTTTGGCCA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CAA 90 bp | TCTTGGATTTTTGAGACAGGGTCTCTCTACACAGCACTGGATGTCCTGGAATTCTCAAACCGATTAACCTaGAGATCTTTATCACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWIFETGSLYTALDVLEFSNRLT*RSLSRS Trigger: TGACCGTGATAAAGATCTCAAGGTTAATCGGTTTGA...GAATTCCAGGACATCCAGTGCTGTGTAGAGAGACCCTGTCTCAAAAATCCAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS CCA 90 bp | TCTTCTCTTAAAGGTTCTTGGCCCCAGACCAAATTCTTTCATTTCTaGTGGAAGCTCAGTCATCCAGGACTCTCTTGTAATTGGTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLKGSWPQTKFFHF*WKLSHPGLSCNWFR Trigger: TCTAAACCAATTACAAGAGAGTCCTGGATGACTGAGCTTCCACCAGAAATGAAAGAATTTGGTCTGGGGCCAAGAACCTTTAAGAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS-3UTR CAA 90 bp | GCCTTCTGGAGCAATGCATGTTTTTCTAACTGTAATGTTGTTCAAAGAACGGTAGGATCCTCTCTGCCTTaGTCATTTTTCTGTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AFWSNACFSNCNVVQRTVGSSLP*SFFCGD Trigger: GTCTCCACAGAAAAATGACAAAGGCAGAGAGGATCC...TACCGTTCTTTGAACAACATTACAGTTAGAAAAACATGCATTGCTCCAGAAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS CCA 90 bp | AGCCTCATCAAACCGATTAACCTTGAGATCTTTATCACGGTCAAATaGTATTCTCTCCTGGTGCTTGTTTTTATCTTCAGCAGCCTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SLIKPINLEIFITVK*YSLLVLVFIFSSLT Trigger: AGTAAGGCTGCTGAAGATAAAAACAAGCACCAGGAGAGAATACCATTTGACCGTGATAAAGATCTCAAGGTTAATCGGTTTGATGAGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS GCA 72 bp | GGGCTCGGGTCCCGTTCCTCGTCCTCAACTGTCGCGTaGTCCTTGAAGCCTGGCGGCAGTGCCGGCCCGATC | + |
|
Preference number: 6 (lower is better) Translates to: GLGSRSSSSTVA*SLKPGGSAGPI Trigger: GATCGGGCCGGCACTGCCGCCAGGCTTCAAGGAGCACGCGACAGTTGAGGACGAGGAACGGGACCCGAGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS TCA 72 bp | GGTCCCGTTCCTCGTCCTCAACTGTCGCGTGCTCCTTaGAGCCTGGCGGCAGTGCCGGCCCGATCAGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPVPRPQLSRAP*SLAAVPARSGP Trigger: GGGACCTGATCGGGCCGGCACTGCCGCCAGGCTTCAAGGAGCACGCGACAGTTGAGGACGAGGAACGGGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS CAA 72 bp | GGGTCCCGTTCCTCGTCCTCAACTGTCGCGTGCTCCTaGAAGCCTGGCGGCAGTGCCGGCCCGATCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSRSSSSTVACS*KPGGSAGPIRS Trigger: GGACCTGATCGGGCCGGCACTGCCGCCAGGCTTCAAGGAGCACGCGACAGTTGAGGACGAGGAACGGGACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS CCA 72 bp | TTCCTCGTCCTCAACTGTCGCGTGCTCCTTGAAGCCTaGCGGCAGTGCCGGCCCGATCAGGTCCCTAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FLVLNCRVLLEA*RQCRPDQVPSH Trigger: ATGGCTAGGGACCTGATCGGGCCGGCACTGCCGCCAGGCTTCAAGGAGCACGCGACAGTTGAGGACGAGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
||
| CDS GCA 72 bp | ACTGCAGCTTCTGTAATTAGGGGGCAGAGCTGGCCCTaGAACCGGGCTCGGGTCCCGTTCCTCGTCCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TAASVIRGQSWP*NRARVPFLVLN Trigger: GTTGAGGACGAGGAACGGGACCCGAGCCCGGTTGCAGGGCCAGCTCTGCCCCCTAATTACAGAAGCTGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CAA 90 bp | TCCCGGTCAGCTGGGGTGTCTGTCCAGACGGATCGGTCTCCGGATTaGTCATCTGCTCTTCTCTTAAAGGTTCTTGGCCCCAGACCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SRSAGVSVQTDRSPD*SSALLLKVLGPRPN Trigger: ATTTGGTCTGGGGCCAAGAACCTTTAAGAGAAGAGCAGATGACAAATCCGGAGACCGATCCGTCTGGACAGACACCCCAGCTGACCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CCA 72 bp | TTCTTGTATTTCCTTAGCTTTCCTCTCCCGGTCAGCTaGGGTGTCTGTCCAGACGGATCGGTCTCCGGATTT | + |
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Preference number: 6 (lower is better) Translates to: FLYFLSFPLPVS*GVCPDGSVSGF Trigger: AAATCCGGAGACCGATCCGTCTGGACAGACACCCCAGCTGACCGGGAGAGGAAAGCTAAGGAAATACAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS GCA 72 bp | GTCTGTCCAGACGGATCGGTCTCCGGATTTGTCATCTaGTCTTCTCTTAAAGGTTCTTGGCCCCAGACCAAA | + |
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Preference number: 6 (lower is better) Translates to: VCPDGSVSGFVI*SSLKGSWPQTK Trigger: TTTGGTCTGGGGCCAAGAACCTTTAAGAGAAGAGCAGATGACAAATCCGGAGACCGATCCGTCTGGACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CCA 72 bp | TTGCCCTGGATCCTCTCTGCCTTTGTCATTTTTCTGTaGAGACTTAATGAAACCAGGTGGCAATGCGGGACC | + |
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Preference number: 6 (lower is better) Translates to: LPWILSAFVIFL*RLNETRWQCGT Trigger: GGTCCCGCATTGCCACCTGGTTTCATTAAGTCTCCACAGAAAAATGACAAAGGCAGAGAGGATCCAGGGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CAA 90 bp | GGTCCAACAATATCCTCATCTTCACCGCTCTCTGCTTCCTCTGAGTaGAAGAATGATGACACTTGCCCTGGATCCTCTCTGCCTTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GPTISSSSPLSASSE*KNDDTCPGSSLPLS Trigger: TGACAAAGGCAGAGAGGATCCAGGGCAAGTGTCATCATTCTTCAACTCAGAGGAAGCAGAGAGCGGTGAAGATGAGGATATTGTTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CCA 72 bp | CGTGACGCTATAGTTAACTGGTCCTTTTGCAGGCATTaGTCCAACAATATCCTCATCTTCACCGCTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RDAIVNWSFCRH*SNNILIFTALC Trigger: GCAGAGAGCGGTGAAGATGAGGATATTGTTGGACCAATGCCTGCAAAAGGACCAGTTAACTATAGCGTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CAA 72 bp | ATATCCTCATCTTCACCGCTCTCTGCTTCCTCTGAGTaGAAGAATGATGACACTTGCCCTGGATCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ISSSSPLSASSE*KNDDTCPGSSL Trigger: CAGAGAGGATCCAGGGCAAGTGTCATCATTCTTCAACTCAGAGGAAGCAGAGAGCGGTGAAGATGAGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CCA 72 bp | GGTTCTTGGCCCCAGACCAAATTCTTTCATTTCTGGTaGAAGCTCAGTCATCCAGGACTCTCTTGTAATTGG | + |
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Preference number: 6 (lower is better) Translates to: GSWPQTKFFHFW*KLSHPGLSCNW Trigger: CCAATTACAAGAGAGTCCTGGATGACTGAGCTTCCACCAGAAATGAAAGAATTTGGTCTGGGGCCAAGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CAA 90 bp | TCTGAGTTGAAGAATGATGACACTTGCCCTGGATCCTCTCTGCCTTaGTCATTTTTCTGTGGAGACTTAATGAAACCAGGTGGCAATGCG | + |
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Preference number: 6 (lower is better) Translates to: SELKNDDTCPGSSLP*SFFCGDLMKPGGNA Trigger: CGCATTGCCACCTGGTTTCATTAAGTCTCCACAGAAAAATGACAAAGGCAGAGAGGATCCAGGGCAAGTGTCATCATTCTTCAACTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS GCA 72 bp | CTCTCTGCTTCCTCTGAGTTGAAGAATGATGACACTTaGCCTGGATCCTCTCTGCCTTTGTCATTTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LSASSELKNDDT*PGSSLPLSFFC Trigger: ACAGAAAAATGACAAAGGCAGAGAGGATCCAGGGCAAGTGTCATCATTCTTCAACTCAGAGGAAGCAGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CCA 72 bp | AAAGGTTCTTGGCCCCAGACCAAATTCTTTCATTTCTaGTGGAAGCTCAGTCATCCAGGACTCTCTTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: KGSWPQTKFFHF*WKLSHPGLSCN Trigger: ATTACAAGAGAGTCCTGGATGACTGAGCTTCCACCAGAAATGAAAGAATTTGGTCTGGGGCCAAGAACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CAA 90 bp | ACCCATCATCATCGTCATCATCATCTTGATTTCGCCTCTGCTTTTTaGCATTTGGACCAGTGTCCTCTTCTTCAGACTCTTGATTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: THHHRHHHLDFASAF*HLDQCPLLQTLDCL Trigger: AAGGCAATCAAGAGTCTGAAGAAGAGGACACTGGTCCAAATGCAAAAAAGCAGAGGCGAAATCAAGATGATGATGACGATGATGATGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CAA 72 bp | CATCGTCATCATCATCTTGATTTCGCCTCTGCTTTTTaGCATTTGGACCAGTGTCCTCTTCTTCAGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: HRHHHLDFASAF*HLDQCPLLQTL Trigger: AAGAGTCTGAAGAAGAGGACACTGGTCCAAATGCAAAAAAGCAGAGGCGAAATCAAGATGATGATGACGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CCA 72 bp | TTGAGATCTTTATCACGGTCAAATGGTATTCTCTCCTaGTGCTTGTTTTTATCTTCAGCAGCCTTACTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LRSLSRSNGILS*CLFLSSAALLF Trigger: AAAGAGTAAGGCTGCTGAAGATAAAAACAAGCACCAGGAGAGAATACCATTTGACCGTGATAAAGATCTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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| CDS CCA 72 bp | AAACCGATTAACCTTGAGATCTTTATCACGGTCAAATaGTATTCTCTCCTGGTGCTTGTTTTTATCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: KPINLEIFITVK*YSLLVLVFIFS Trigger: GCTGAAGATAAAAACAAGCACCAGGAGAGAATACCATTTGACCGTGATAAAGATCTCAAGGTTAATCGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022585.5 |
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