Pregenerated sensors for GPA33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000544Ensembl transcript IDs: ENSMUST00000060833.14, ENSMUST00000166159.2, ENSMUST00000166860.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGGCAGACTCCCACCTTCTGAAACTGGTGCTGAAGCTGGCGCTTaGCTGTATGGCGAGCTTGGAACAGAAGCAGCCCTGCATCGTGCC | + |
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Preference number: 1 (lower is better) Translates to: QGRLPPSETGAEAGA*LYGELGTEAALHRA Trigger: GGCACGATGCAGGGCTGCTTCTGTTCCAAGCTCGCCATACAGGCAAGCGCCAGCTTCAGCACCAGTTTCAGAAGGTGGGAGTCTGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR CCA 90 bp | TCCAGTAGTAAAACACATTTGGAGCAGCCCATCTGGCCTGAGTCCTaGATAGTAATGGAAAGGGGAGGCTGCGGCAGGCAGGGCAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SSSKTHLEQPIWPES*IVMERGGCGRQGSW Trigger: CCAGCTGCCCTGCCTGCCGCAGCCTCCCCTTTCCATTACTATCCAGGACTCAGGCCAGATGGGCTGCTCCAAATGTGTTTTACTACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR TCA 90 bp | AGAGAGGCAGAGGATGCTGTCTGGTCTAGGGAGAAGGCCAGACCCTaGGTCAGATTTAGCAATGAGGAAGGGTCCTTTCAGTGGTCATCA | + |
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Preference number: 1 (lower is better) Translates to: REAEDAVWSREKARP*VRFSNEEGSFQWSS Trigger: TGATGACCACTGAAAGGACCCTTCCTCATTGCTAAATCTGACTCAGGGTCTGGCCTTCTCCCTAGACCAGACAGCATCCTCTGCCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | CGGGGCTTGGGTGGAGTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGCACGCCATGGTGGGAGATaGAGCAGAGGGGGACGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RGLGGVTRCPKSHPGGKARHGGR*SRGGRW Trigger: CCAGCGTCCCCCTCTGCTCCATCTCCCACCATGGCG...TGCTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGACTCCACCCAAGCCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGAGTCCTGGATAGTAATGGAAAGGGGAGGCTGCGGCAGGCAGGGCAGCTGGGGACAGGCAGGCCCTTaGCAGGCAGAGATGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: PESWIVMERGGCGRQGSWGQAGP*QAEMEL Trigger: CAGTTCCATCTCTGCCTGTCAAGGGCCTGCCTGTCC...CCAGCTGCCCTGCCTGCCGCAGCCTCCCCTTTCCATTACTATCCAGGACTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGCACTGTCCATGAGGAGTGTCGGGCATGGTaGGGCAGGGCAGACTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: WSHQVSQVTPRRQSTVHEECRAW*GRADSH Trigger: GTGGGAGTCTGCCCTGCCTCACCATGCCCGACACTC...CTCATGGACAGTGCTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGACTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGCCTTGCATGCAGCCCAGGTCTAGGTGTGGGACAAAGTGACTTCATTGCCGAGTGTCGGGCATGGTaGGGCAGGGCAGACTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: DGLACSPGLGVGQSDFIAECRAW*GRADSH Trigger: GTGGGAGTCTGCCCTGCCTCACCATGCCCGACACTC...GGCAATGAAGTCACTTTGTCCCACACCTAGACCTGGGCTGCATGCAAGGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGGCTCCAAGATCCAGACCTTGCTCCAGGGCACCTACTCTAACACAGCAGCAGGACTATGGGGCTaGGGAGAAGGGTGGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LPGSKIQTLLQGTYSNTAAGLWG*GEGWPE Trigger: CTCTGGCCACCCTTCTCCCCAGCCCCATAGTCCTGC...TGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTGGATCTTGGAGCCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060833.14 |
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| 3UTR-3UTR CCA 90 bp | ACTAACACGGGGCTTGGGTGGAGTCACCAGGTGTCCCAAGTCACACCCAGGAGGGTGCAGGCCCATCACTaGTTCTCCTCTGAGTGTCGG | + |
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Preference number: 2 (lower is better) Translates to: TNTGLGWSHQVSQVTPRRVQAHH*FSSECR Trigger: CCGACACTCAGAGGAGAACCAGTGATGGGCCTGCAC...CCTCCTGGGTGTGACTTGGGACACCTGGTGACTCCACCCAAGCCCCGTGTTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATCCAGACCTTGCTCCAGGGCACCTACTCTAACACAGCAGGAAGTGTAGCTAGCAGAGGGGGACGCTaGAGGCCACCGTGGCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KIQTLLQGTYSNTAGSVASRGGR*RPPWPL Trigger: GAGGGGCCACGGTGGCCTCCAGCGTCCCCCTCTGCT...AGCTACACTTCCTGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTGGATCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGCCTTGCATGCAGCCCAGGTCTAGGTGTGGGACAAAGTGACTTCATTGCCCGCCATGGTGGGAGATaGAGCAGAGGGGGACGCTGG | + |
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Preference number: 2 (lower is better) Translates to: DGLACSPGLGVGQSDFIARHGGR*SRGGRW Trigger: CCAGCGTCCCCCTCTGCTCCATCTCCCACCATGGCG...GGCAATGAAGTCACTTTGTCCCACACCTAGACCTGGGCTGCATGCAAGGCCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTGCCCACCTAGCCAGACTAACACGGGGCTTGGGTGGAGTCACCAGGTGTACAGAAACGCCATGGTaGGAGATGGAGCAGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: QSAHLARLTRGLGGVTRCTETPW*EMEQRG Trigger: CCCCCTCTGCTCCATCTCCCACCATGGCGTTTCTGT...ACACCTGGTGACTCCACCCAAGCCCCGTGTTAGTCTGGCTAGGTGGGCAGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR CAA 90 bp | AGAGCAAGTCCCCAGTTGAGGCTGCCAGGCTCCAAGATCCAGACCTaGCTCCAGGGCACCTACTCTAACACAGCAGGAAGTGTAGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RASPQLRLPGSKIQT*LQGTYSNTAGSVAL Trigger: CAGAGCTACACTTCCTGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTGGATCTTGGAGCCTGGCAGCCTCAACTGGGGACTTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR GCA 90 bp | GCGCTTGCCTGTATGGCGAGCTTGGAACAGAAGCAGCCCTGCATCGTGCCGAGAATACACAGAAAGAAGTaGTCCACCAATGCCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: ALACMASLEQKQPCIVPRIHRKK*STNAWG Trigger: CCCCCAGGCATTGGTGGAGCACTTCTTTCTGTGTAT...TCTCGGCACGATGCAGGGCTGCTTCTGTTCCAAGCTCGCCATACAGGCAAGCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR CAA 90 bp | GCTGCGGCAGGCAGGGCAGCTGGCAGGTGCGAGGGAAGTAAGCTTTaGTCTGTGTTCATTGTAAATCAGTCTGCCCACCTAGCCAGACTA | + |
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Preference number: 2 (lower is better) Translates to: AAAGRAAGRCEGSKL*SVFIVNQSAHLARL Trigger: TAGTCTGGCTAGGTGGGCAGACTGATTTACAATGAACACAGACAAAAGCTTACTTCCCTCGCACCTGCCAGCTGCCCTGCCTGCCGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTGGAGCAGCCCATCTGGCCTGAGTCCTGGATAGTAATGGAAAGGGGAGGCGCAGAGGATGCTGTCTaGTCTAGGGAGAAGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: HLEQPIWPESWIVMERGGAEDAV*SREKAR Trigger: TCTGGCCTTCTCCCTAGACCAGACAGCATCCTCTGC...GCCTCCCCTTTCCATTACTATCCAGGACTCAGGCCAGATGGGCTGCTCCAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGTCCTGGATAGTAATGGAAAGGGGAGGCTGCGGCAGGCAGGGCAGCTGGCTTGACAGGCAGAGATaGAACTGTGTTTGGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: PESWIVMERGGCGRQGSWLDRQR*NCVWRS Trigger: ACTTCTCCAAACACAGTTCCATCTCTGCCTGTCAAG...CCAGCTGCCCTGCCTGCCGCAGCCTCCCCTTTCCATTACTATCCAGGACTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAGGCTCCAAGATCCAGACCTTGCTCCAGGGCACCTACTCTAACACAGCAGAGAAGGCCAGACCCTaGGTCAGATTTAGCAATGAG | + |
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Preference number: 2 (lower is better) Translates to: LPGSKIQTLLQGTYSNTAEKARP*VRFSNE Trigger: CTCATTGCTAAATCTGACTCAGGGTCTGGCCTTCTC...TGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTGGATCTTGGAGCCTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAGGGCAGCTGGCAGGTGCGAGGGAAGTAAGCTTTTGTCTGTGTTCATTGAGGTGTGGGACAAAGTaGCTTCATTGCCTCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: QAGQLAGAREVSFCLCSLRCGTK*LHCLLV Trigger: CACCAGGAGGCAATGAAGTCACTTTGTCCCACACCT...CAATGAACACAGACAAAAGCTTACTTCCCTCGCACCTGCCAGCTGCCCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCCAGGTCTAGGTGTGGGACAAAGTGACTTCATTGCCTCCTGGTGTGTTAGCCCTGTATGGCGAGCTTaGAACAGAAGCAGCCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SPGLGVGQSDFIASWCVSPVWRA*NRSSPA Trigger: TGCAGGGCTGCTTCTGTTCCAAGCTCGCCATACAGG...GCTAACACACCAGGAGGCAATGAAGTCACTTTGTCCCACACCTAGACCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | CACGGGGCTTGGGTGGAGTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGAGATGGAACTGTGTTTaGAGAAGTCCTAAGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: HGAWVESPGVPSHTQEAKRWNCV*RSPKKV Trigger: CACCTTCTTAGGACTTCTCCAAACACAGTTCCATCT...CTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGACTCCACCCAAGCCCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTGCCCACCTAGCCAGACTAACACGGGGCTTGGGTGGAGTCACCAGGTGTCTTGACAGGCAGAGATaGAACTGTGTTTGGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: QSAHLARLTRGLGGVTRCLDRQR*NCVWRS Trigger: ACTTCTCCAAACACAGTTCCATCTCTGCCTGTCAAG...ACACCTGGTGACTCCACCCAAGCCCCGTGTTAGTCTGGCTAGGTGGGCAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTGCCCACCTAGCCAGACTAACACGGGGCTTGGGTGGAGTCACCAGGTGTACTACACCTTATCGTTaGTTTCTTCCCTTCATTCAA | + |
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Preference number: 2 (lower is better) Translates to: QSAHLARLTRGLGGVTRCTTPYR*FLPFIQ Trigger: TTGAATGAAGGGAAGAAATCAACGATAAGGTGTAGT...ACACCTGGTGACTCCACCCAAGCCCCGTGTTAGTCTGGCTAGGTGGGCAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGTTCATTGTAAATCAGTCTGCCCACCTAGCCAGACTAACACGGGGCTTGGGATACACAGAAAGAAGTaGTCCACCAATGCCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: CVHCKSVCPPSQTNTGLGIHRKK*STNAWG Trigger: CCCCCAGGCATTGGTGGAGCACTTCTTTCTGTGTAT...CCCAAGCCCCGTGTTAGTCTGGCTAGGTGGGCAGACTGATTTACAATGAACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATTCAACAAAATATTGCGTGCAGGCCCATCACTGGTTCTCCTCTGAGTGTCGCAGAGGATGCTGTCTaGTCTAGGGAGAAGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: FIQQNIACRPITGSPLSVAEDAV*SREKAR Trigger: TCTGGCCTTCTCCCTAGACCAGACAGCATCCTCTGC...GACACTCAGAGGAGAACCAGTGATGGGCCTGCACGCAATATTTTGTTGAATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR TCA 90 bp | TTCATTCAACAAAATATTGCGTGCAGGCCCATCACTGGTTCTCCTCTGAGTGTCGAGAAGGCCAGACCCTaGGTCAGATTTAGCAATGAG | + |
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Preference number: 2 (lower is better) Translates to: FIQQNIACRPITGSPLSVEKARP*VRFSNE Trigger: CTCATTGCTAAATCTGACTCAGGGTCTGGCCTTCTC...GACACTCAGAGGAGAACCAGTGATGGGCCTGCACGCAATATTTTGTTGAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATCCAGACCTTGCTCCAGGGCACCTACTCTAACACAGCAGGAAGTGTAGCTGGATTAAGAAAGATTTaGGGATCCAAGACTAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: KIQTLLQGTYSNTAGSVAGLRKI*GSKTSE Trigger: CTCACTAGTCTTGGATCCCCAAATCTTTCTTAATCC...AGCTACACTTCCTGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTGGATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR CAA 90 bp | GCTTTTCTGGTGATCCAGAAAGGTTTATCCAGTAGTAAAACACATTaGGAGCAGCCCATCTGGCCTGAGTCCTGGATAGTAATGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: AFLVIQKGLSSSKTH*EQPIWPESWIVMER Trigger: CCTTTCCATTACTATCCAGGACTCAGGCCAGATGGGCTGCTCCAAATGTGTTTTACTACTGGATAAACCTTTCTGGATCACCAGAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | ATATGTGTACATAAAATCAGAGGAGGGAAGGGATTGATACAGTTGCTTTTCTGGCCTGTATGGCGAGCTTaGAACAGAAGCAGCCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ICVHKIRGGKGLIQLLFWPVWRA*NRSSPA Trigger: TGCAGGGCTGCTTCTGTTCCAAGCTCGCCATACAGG...CCAGAAAAGCAACTGTATCAATCCCTTCCCTCCTCTGATTTTATGTACACATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAAAACACATTTGGAGCAGCCCATCTGGCCTGAGTCCTGGATAGTAATGGAAGGGGCGCAATTAAGCTaGGTAAATCACAGAAACTAC | + |
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Preference number: 2 (lower is better) Translates to: SKTHLEQPIWPESWIVMEGAQLS*VNHRNY Trigger: GTAGTTTCTGTGATTTACCCAGCTTAATTGCGCCCC...TTCCATTACTATCCAGGACTCAGGCCAGATGGGCTGCTCCAAATGTGTTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR CCA 72 bp | GTCTGCCCACCTAGCCAGACTAACACGGGGCTTGGGTaGAGTCACCAGGTGTCCCAAGTCACACCCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: VCPPSQTNTGLG*SHQVSQVTPRR Trigger: CCTCCTGGGTGTGACTTGGGACACCTGGTGACTCCACCCAAGCCCCGTGTTAGTCTGGCTAGGTGGGCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CAA 90 bp | CGGGGCTTGGGTGGAGTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGCAAGGACAGGCAGGCCCTaGACAGGCAGAGATGGAACT | + |
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Preference number: 3 (lower is better) Translates to: RGLGGVTRCPKSHPGGKARTGRP*TGRDGT Trigger: AGTTCCATCTCTGCCTGTCAAGGGCCTGCCTGTCCT...TGCTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGACTCCACCCAAGCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR GCA 72 bp | CTCCCACCTTCTGAAACTGGTGCTGAAGCTGGCGCTTaGCTGTATGGCGAGCTTGGAACAGAAGCAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: LPPSETGAEAGA*LYGELGTEAAL Trigger: CAGGGCTGCTTCTGTTCCAAGCTCGCCATACAGGCAAGCGCCAGCTTCAGCACCAGTTTCAGAAGGTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR CCA 72 bp | AGGCAGATACACAGAAAGAAGTGCTCCACCAATGCCTaGGGGGAGGAGCAGGACTATGGGGCTGGGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: RQIHRKKCSTNA*GEEQDYGAGQK Trigger: CTTCTGCCCAGCCCCATAGTCCTGCTCCTCCCCCCAGGCATTGGTGGAGCACTTCTTTCTGTGTATCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166860.2 |
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| 3UTR TCA 72 bp | GGTAGGACGTCAGTAGCCAGGCCAGTGATGCGCCCCTaGGGCAGATACACAGAAAGAAGTGCTCCACCAATG | + |
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Preference number: 3 (lower is better) Translates to: GRTSVARPVMRP*GRYTERSAPPM Trigger: CATTGGTGGAGCACTTCTTTCTGTGTATCTGCCTCAGGGGCGCATCACTGGCCTGGCTACTGACGTCCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGTTCATTGTAAATCAGTCTGCCCACCTAGCCAGACTAACACGGGGCTTGGGGCCTGTATGGCGAGCTaGGAACAGAAGCAGCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: CVHCKSVCPPSQTNTGLGACMAS*EQKQPC Trigger: GCAGGGCTGCTTCTGTTCCAAGCTCGCCATACAGGC...CCCAAGCCCCGTGTTAGTCTGGCTAGGTGGGCAGACTGATTTACAATGAACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR CCA 72 bp | AAAACACATTTGGAGCAGCCCATCTGGCCTGAGTCCTaGATAGTAATGGAAAGGGGAGGCTGCGGCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: KTHLEQPIWPES*IVMERGGCGRQ Trigger: CTGCCTGCCGCAGCCTCCCCTTTCCATTACTATCCAGGACTCAGGCCAGATGGGCTGCTCCAAATGTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR TCA 72 bp | GAGGATGCTGTCTGGTCTAGGGAGAAGGCCAGACCCTaGGTCAGATTTAGCAATGAGGAAGGGTCCTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: EDAVWSREKARP*VRFSNEEGSFQ Trigger: CTGAAAGGACCCTTCCTCATTGCTAAATCTGACTCAGGGTCTGGCCTTCTCCCTAGACCAGACAGCATCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR CCA 72 bp | TTATCCAGTAGTAAAACACATTTGGAGCAGCCCATCTaGCCTGAGTCCTGGATAGTAATGGAAAGGGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LSSSKTHLEQPI*PESWIVMERGG Trigger: GCCTCCCCTTTCCATTACTATCCAGGACTCAGGCCAGATGGGCTGCTCCAAATGTGTTTTACTACTGGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CAA 90 bp | CATTTGGAGCAGCCCATCTGGCCTGAGTCCTGGATAGTAATGGAAAGGGGAGGCGAGGGAAGTAAGCTTTaGTCTGTGTTCATTGTAAAT | + |
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Preference number: 3 (lower is better) Translates to: HLEQPIWPESWIVMERGGEGSKL*SVFIVN Trigger: ATTTACAATGAACACAGACAAAAGCTTACTTCCCTC...GCCTCCCCTTTCCATTACTATCCAGGACTCAGGCCAGATGGGCTGCTCCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGATGGAACTGTGTTTGGAGAAGTCCTAAGAAGGTGTGTGTCCAGGAACAGAAACTACACCTTATCGTaGATTTCTTCCCTTCATTCA | + |
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Preference number: 3 (lower is better) Translates to: RDGTVFGEVLRRCVSRNRNYTLS*ISSLHS Trigger: TGAATGAAGGGAAGAAATCAACGATAAGGTGTAGTT...TCTGTTCCTGGACACACACCTTCTTAGGACTTCTCCAAACACAGTTCCATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR-3UTR CAA 90 bp | ATATGTGTACATAAAATCAGAGGAGGGAAGGGATTGATACAGTTGCTTTTCTGGAACTACACCTTATCGTaGATTTCTTCCCTTCATTCA | + |
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Preference number: 3 (lower is better) Translates to: ICVHKIRGGKGLIQLLFWNYTLS*ISSLHS Trigger: TGAATGAAGGGAAGAAATCAACGATAAGGTGTAGTT...CCAGAAAAGCAACTGTATCAATCCCTTCCCTCCTCTGATTTTATGTACACATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| 3UTR TCA 72 bp | ATATATGTGTACATAAAATCAGAGGAGGGAAGGGATTaGTACAGTTGCTTTTCTGGTGATCCAGAAAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: IYVYIKSEEGRD*YSCFSGDPERF Trigger: AAACCTTTCTGGATCACCAGAAAAGCAACTGTATCAATCCCTTCCCTCCTCTGATTTTATGTACACATATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS-3UTR GCA 90 bp | GGCGAGCTTGGAACAGAAGCAGCCCTGCATCGTGCCGAGATTCTAGGAGGCCCTGGAGGGAGGTCTGGGTaGCACGGTGATGTTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GELGTEAALHRAEILGGPGGRSG*HGDVAG Trigger: TCCTGCAACATCACCGTGGCACCCAGACCTCCCTCC...AGGGCCTCCTAGAATCTCGGCACGATGCAGGGCTGCTTCTGTTCCAAGCTCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS-3UTR TCA 90 bp | GTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGCACTGTCCATGAGAGCACAACAATGGCTCGCCTaGGACTGGCTGGGTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTRCPKSHPGGKALSMRAQQWLA*DWLGEG Trigger: CCCCTCACCCAGCCAGTCTCAGGCGAGCCATTGTTG...TGCTCTCATGGACAGTGCTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCGTAAGAGAGGCAGAGGATGCTGTCTGGTCTAGGGAGAAGGCCAGACCCCTTCCAGCTGTATTGTaGGCTCGGAGAGCCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAVREAEDAVWSREKARPLPAVL*ARRALC Trigger: GCAGAGGGCTCTCCGAGCCCACAATACAGCTGGAAG...GGGTCTGGCCTTCTCCCTAGACCAGACAGCATCCTCTGCCTCTCTTACGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR TCA 90 bp | CAGACCTTGCTCCAGGGCACCTACTCTAACACAGCAGGAAGTGTAGCTCTGATGCTGAGACTGGCTGGGTaGGGGGCCGCTGCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLLQGTYSNTAGSVALMLRLAG*GAAAGS Trigger: AGAACCAGCAGCGGCCCCTCACCCAGCCAGTCTCAG...CATCAGAGCTACACTTCCTGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR GCA 90 bp | CGGGGCTTGGGTGGAGTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGCAAGCAGCGACCCAGATTaGACAGAACATCCACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGLGGVTRCPKSHPGGKASSDPD*TEHPHH Trigger: GTGGTGTGGATGTTCTGTGCAATCTGGGTCGCTGCT...TGCTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGACTCCACCCAAGCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR GCA 90 bp | GTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGCACTGTCCATGAGAGCAGGAGGGAGGTCTGGGTaGCACGGTGATGTTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTRCPKSHPGGKALSMRAGGRSG*HGDVAG Trigger: TCCTGCAACATCACCGTGGCACCCAGACCTCCCTCC...TGCTCTCATGGACAGTGCTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAGTCCTGGATAGTAATGGAAAGGGGAGGCTGCGGCAGGCAGGGCAGCTGGATCACCATCTCCCCTTaGATGCTGCAGTCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PESWIVMERGGCGRQGSWITISP*MLQSGL Trigger: CAAGCCAGACTGCAGCATCCAAGGGGAGATGGTGAT...CCAGCTGCCCTGCCTGCCGCAGCCTCCCCTTTCCATTACTATCCAGGACTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGAGTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGCACTGTCCATTTGGAAAGGCTGGTCTaGAGTGCTACGCCCCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWSHQVSQVTPRRQSTVHLERLV*SATPRA Trigger: AGCTCGGGGCGTAGCACTCCAGACCAGCCTTTCCAA...ATGGACAGTGCTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGACTCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | GCGCTTGCCTGTATGGCGAGCTTGGAACAGAAGCAGCCCTGCATCGTGCCGAGAGAGTGGCATGTCAGCTaGATGTTGTTCCCGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: ALACMASLEQKQPCIVPREWHVS*MLFPIT Trigger: GGTGATCGGGAACAACATCCAGCTGACATGCCACTC...TCTCGGCACGATGCAGGGCTGCTTCTGTTCCAAGCTCGCCATACAGGCAAGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGGCATGGTGAGGCAGGGCAGACTCCCACCTTCTGAAACTGGTGCTGAAGAGCCCTCTGCAGAGTaGCATGTCAGCTGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSGMVRQGRLPPSETGAEEPSAE*HVSWML Trigger: CAACATCCAGCTGACATGCCACTCTGCAGAGGGCTC...TTCAGCACCAGTTTCAGAAGGTGGGAGTCTGCCCTGCCTCACCATGCCCGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| 3UTR CAA 72 bp | CCCCAGTTGAGGCTGCCAGGCTCCAAGATCCAGACCTaGCTCCAGGGCACCTACTCTAACACAGCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQLRLPGSKIQT*LQGTYSNTAGS Trigger: ACTTCCTGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTGGATCTTGGAGCCTGGCAGCCTCAACTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| 3UTR CAA 72 bp | AATCAGTCTGCCCACCTAGCCAGACTAACACGGGGCTaGGGTGGAGTCACCAGGTGTCCCAAGTCACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQSAHLARLTRG*GGVTRCPKSHP Trigger: TGGGTGTGACTTGGGACACCTGGTGACTCCACCCAAGCCCCGTGTTAGTCTGGCTAGGTGGGCAGACTGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTAGGGAGAAGGCCAGACCCTGAGTCAGATTTAGCAATGAGGAAGGGTCCTGCTCGGAGAGCCCTCTaGAGAGTGGCATGTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGRRPDPESDLAMRKGPARRAL*RVACQL Trigger: CAGCTGACATGCCACTCTGCAGAGGGCTCTCCGAGC...AGGACCCTTCCTCATTGCTAAATCTGACTCAGGGTCTGGCCTTCTCCCTAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGGCAGCTGGCAGGTGCGAGGGAAGTAAGCTTTTGTCTGTGTTCATTGGTCTGGCTTGGAGGGTaGAACAAGGACCAAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QAGQLAGAREVSFCLCSLVWLGG*NKDQEA Trigger: CGCCTCTTGGTCCTTGTTCCACCCTCCAAGCCAGAC...CAATGAACACAGACAAAAGCTTACTTCCCTCGCACCTGCCAGCTGCCCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGCATGGTGAGGCAGGGCAGACTCCCACCTTCTGAAACTGGTGCTGAAGCTGCTTATCCCACTGAATaGACCCCTCTCGGTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGMVRQGRLPPSETGAEAAYPTE*TPLGLK Trigger: TTTCAGACCGAGAGGGGTTCATTCAGTGGGATAAGC...AGCTTCAGCACCAGTTTCAGAAGGTGGGAGTCTGCCCTGCCTCACCATGCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR TCA 90 bp | GCGCTTGCCTGTATGGCGAGCTTGGAACAGAAGCAGCCCTGCATCGTGCCGAGAGCATCCTCCCTGTCTTaGTCTTTGTCATCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALACMASLEQKQPCIVPRASSLS*SLSSFS Trigger: GGAAAAGGATGACAAAGATCAAGACAGGGAGGATGC...TCTCGGCACGATGCAGGGCTGCTTCTGTTCCAAGCTCGCCATACAGGCAAGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGCTCCAAGATCCAGACCTTGCTCCAGGGCACCTACTCTAACACAGCAGAGTGGCATGTCAGCTaGATGTTGTTCCCGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSKIQTLLQGTYSNTAEWHVS*MLFPIT Trigger: GGTGATCGGGAACAACATCCAGCTGACATGCCACTC...TGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTGGATCTTGGAGCCTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGGTCTAGGTGTGGGACAAAGTGACTTCATTGCCTCCTGGTGTGTTAGCTTGGAAAGGCTGGTCTaGAGTGCTACGCCCCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPGLGVGQSDFIASWCVSLERLV*SATPRA Trigger: AGCTCGGGGCGTAGCACTCCAGACCAGCCTTTCCAA...GCTAACACACCAGGAGGCAATGAAGTCACTTTGTCCCACACCTAGACCTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR TCA 90 bp | GTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGCACTGTCCATGAGAGCAGCTTATCCCACTGAATaGACCCCTCTCGGTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTRCPKSHPGGKALSMRAAYPTE*TPLGLK Trigger: TTTCAGACCGAGAGGGGTTCATTCAGTGGGATAAGC...TGCTCTCATGGACAGTGCTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTCTGAAACTGGTGCTGAAGCTGGCGCTTGCCTGTATGGCGAGCTTGGAATTGGATGCTGCAGTCTaGCTTGGAGGGTGGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLLKLVLKLALACMASLELDAAV*LGGWNK Trigger: CTTGTTCCACCCTCCAAGCCAGACTGCAGCATCCAA...TTCCAAGCTCGCCATACAGGCAAGCGCCAGCTTCAGCACCAGTTTCAGAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | CATTTGGAGCAGCCCATCTGGCCTGAGTCCTGGATAGTAATGGAAAGGGGAGGCATCACCATCTCCCCTTaGATGCTGCAGTCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLEQPIWPESWIVMERGGITISP*MLQSGL Trigger: CAAGCCAGACTGCAGCATCCAAGGGGAGATGGTGAT...GCCTCCCCTTTCCATTACTATCCAGGACTCAGGCCAGATGGGCTGCTCCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGCTCCAAGATCCAGACCTTGCTCCAGGGCACCTACTCTAACACAGCATCCCCACGTCATTGCTaGAGGTGCAGATGTAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSKIQTLLQGTYSNTASPRHC*RCRCSN Trigger: GTTACTACATCTGCACCTCCAGCAATGACGTGGGGA...TGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTGGATCTTGGAGCCTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR GCA 90 bp | AAGATCCAGACCTTGCTCCAGGGCACCTACTCTAACACAGCAGGAAGTGTAGCTCGGAGCACTCGTAGGTaGCATTGTCGTCCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KIQTLLQGTYSNTAGSVARSTRR*HCRPWS Trigger: TGACCATGGACGACAATGGCACCTACGAGTGCTCCG...AGCTACACTTCCTGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTGGATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGGTCTAGGTGTGGGACAAAGTGACTTCATTGCCTCCTGGTGTGTTAGCCGTCATTGCTGGAGGTaGAGATGTAGTAACCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGLGVGQSDFIASWCVSRHCWR*RCSNPL Trigger: CAGCGGGTTACTACATCTGCACCTCCAGCAATGACG...GCTAACACACCAGGAGGCAATGAAGTCACTTTGTCCCACACCTAGACCTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTCTGAAACTGGTGCTGAAGCTGGCGCTTGCCTGTATGGCGAGCTTGGAATCCCCACGTCATTGCTaGAGGTGCAGATGTAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLLKLVLKLALACMASLESPRHC*RCRCSN Trigger: GTTACTACATCTGCACCTCCAGCAATGACGTGGGGA...TTCCAAGCTCGCCATACAGGCAAGCGCCAGCTTCAGCACCAGTTTCAGAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| 3UTR CAA 72 bp | GGCAGGGCAGCTGGCAGGTGCGAGGGAAGTAAGCTTTaGTCTGTGTTCATTGTAAATCAGTCTGCCCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: GRAAGRCEGSKL*SVFIVNQSAHL Trigger: TAGGTGGGCAGACTGATTTACAATGAACACAGACAAAAGCTTACTTCCCTCGCACCTGCCAGCTGCCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGGCAGCTGGCAGGTGCGAGGGAAGTAAGCTTTTGTCTGTGTTCATTGTCACAAAATTCCAGGTaGCCACTCTTTCCGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QAGQLAGAREVSFCLCSLSQNSR*PLFPSD Trigger: GTCAGACGGAAAGAGTGGTCACCTGGAATTTTGTGA...CAATGAACACAGACAAAAGCTTACTTCCCTCGCACCTGCCAGCTGCCCTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCCTTCATTCAACAAAATATTGCGTGCAGGCCCATCACTGGTTCTCCTCTGCTTCCAGCTGTATTGTaGGCTCGGAGAGCCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPFIQQNIACRPITGSPLLPAVL*ARRALC Trigger: GCAGAGGGCTCTCCGAGCCCACAATACAGCTGGAAG...CAGAGGAGAACCAGTGATGGGCCTGCACGCAATATTTTGTTGAATGAAGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCAGGTCTAGGTGTGGGACAAAGTGACTTCATTGCCTCCTGGTGTGTTAGCGCATCCTCCCTGTCTTaGTCTTTGTCATCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPGLGVGQSDFIASWCVSASSLS*SLSSFS Trigger: GGAAAAGGATGACAAAGATCAAGACAGGGAGGATGC...GCTAACACACCAGGAGGCAATGAAGTCACTTTGTCCCACACCTAGACCTGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR GCA 90 bp | AGTAAAACACATTTGGAGCAGCCCATCTGGCCTGAGTCCTGGATAGTAATGGAACGGAGCACTCGTAGGTaGCATTGTCGTCCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKTHLEQPIWPESWIVMERSTRR*HCRPWS Trigger: TGACCATGGACGACAATGGCACCTACGAGTGCTCCG...TTCCATTACTATCCAGGACTCAGGCCAGATGGGCTGCTCCAAATGTGTTTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR TCA 90 bp | TCAGATTTAGCAATGAGGAAGGGTCCTTTCAGTGGTCATCAGGTAGGACGTCAGTCACAAAATTCCAGGTaGCCACTCTTTCCGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SDLAMRKGPFSGHQVGRQSQNSR*PLFPSD Trigger: GTCAGACGGAAAGAGTGGTCACCTGGAATTTTGTGA...CTGACGTCCTACCTGATGACCACTGAAAGGACCCTTCCTCATTGCTAAATCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGATTGATACAGTTGCTTTTCTGGTGATCCAGAAAGGTTTATCCAGTAGTTCGTCCATGGTCAGCTaGTCGATGGTGATAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGIDTVAFLVIQKGLSSSSSMVS*SMVIEA Trigger: TGCCTCTATCACCATCGACCAGCTGACCATGGACGA...ACTACTGGATAAACCTTTCTGGATCACCAGAAAAGCAACTGTATCAATCCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR GCA 90 bp | ATATGTGTACATAAAATCAGAGGAGGGAAGGGATTGATACAGTTGCTTTTCTGGCGTCATTGCTGGAGGTaGAGATGTAGTAACCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICVHKIRGGKGLIQLLFWRHCWR*RCSNPL Trigger: CAGCGGGTTACTACATCTGCACCTCCAGCAATGACG...CCAGAAAAGCAACTGTATCAATCCCTTCCCTCCTCTGATTTTATGTACACATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | GGTAAATCACAGAAACTACACCTTATCGTTGATTTCTTCCCTTCATTCAACAAAGTCTGGCTTGGAGGGTaGAACAAGGACCAAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GKSQKLHLIVDFFPSFNKVWLGG*NKDQEA Trigger: CGCCTCTTGGTCCTTGTTCCACCCTCCAAGCCAGAC...TTTGTTGAATGAAGGGAAGAAATCAACGATAAGGTGTAGTTTCTGTGATTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTTGCTTTTCTGGTGATCCAGAAAGGTTTATCCAGTAGTAAAACACATTTGAGCAGCGACCCAGATTaGACAGAACATCCACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVAFLVIQKGLSSSKTHLSSDPD*TEHPHH Trigger: GTGGTGTGGATGTTCTGTGCAATCTGGGTCGCTGCT...CAAATGTGTTTTACTACTGGATAAACCTTTCTGGATCACCAGAAAAGCAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | ATTAAGCTGGGTAAATCACAGAAACTACACCTTATCGTTGATTTCTTCCCTTCATCGTCCATGGTCAGCTaGTCGATGGTGATAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKLGKSQKLHLIVDFFPSSSMVS*SMVIEA Trigger: TGCCTCTATCACCATCGACCAGCTGACCATGGACGA...TGAAGGGAAGAAATCAACGATAAGGTGTAGTTTCTGTGATTTACCCAGCTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CCA 90 bp | GGTAAATCACAGAAACTACACCTTATCGTTGATTTCTTCCCTTCATTCAACAAAGAGCCCTCTGCAGAGTaGCATGTCAGCTGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKSQKLHLIVDFFPSFNKEPSAE*HVSWML Trigger: CAACATCCAGCTGACATGCCACTCTGCAGAGGGCTC...TTTGTTGAATGAAGGGAAGAAATCAACGATAAGGTGTAGTTTCTGTGATTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CAA 90 bp | GCCGAGATTCTAGGAGGCCCTGCCAGCCGTAAGAGAGGCAGAGGATGCTGTCTGATGCTGCAGTCTGGCTaGGAGGGTGGAACAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: AEILGGPASRKRGRGCCLMLQSG*EGGTRT Trigger: GGTCCTTGTTCCACCCTCCAAGCCAGACTGCAGCAT...CAGACAGCATCCTCTGCCTCTCTTACGGCTGGCAGGGCCTCCTAGAATCTCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS TCA 90 bp | GAGGCGGACTCGAGACTTGGCGTTGACATCCTGGTCCGACATCAGTaGCACGGAGCACTCGTAGGTGCCATTGTCGTCCATGGTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EADSRLGVDILVRHQ*HGALVGAIVVHGQL Trigger: CAGCTGACCATGGACGACAATGGCACCTACGAGTGCTCCGTGTCACTGATGTCGGACCAGGATGTCAACGCCAAGTCTCGAGTCCGCCTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS TCA 90 bp | TGGAGGGTGGAACAAGGACCAAGAGGCGGACTCGAGACTTGGCGTTaGCATCCTGGTCCGACATCAGTGACACGGAGCACTCGTAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WRVEQGPRGGLETWR*HPGPTSVTRSTRRC Trigger: GCACCTACGAGTGCTCCGTGTCACTGATGTCGGACCAGGATGTCAACGCCAAGTCTCGAGTCCGCCTCTTGGTCCTTGTTCCACCCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060833.14 ENSMUST00000166159.2 ENSMUST00000166860.2 |
||
| CDS CCA 90 bp | GGGCCGCTGCTGGTTCTGGGCGTTGTAACTCTTCCAGCTGTATTGTaGGCTCGGAGAGCCCTCTGCAGAGTGGCATGTCAGCTGGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: GPLLVLGVVTLPAVL*ARRALCRVACQLDV Trigger: AACATCCAGCTGACATGCCACTCTGCAGAGGGCTCTCCGAGCCCACAATACAGCTGGAAGAGTTACAACGCCCAGAACCAGCAGCGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS TCA 90 bp | CCGCATACAGCGCAATGTTCATGGAGGGAGGTCTGGGTGCCACGGTaGTGTTGCAGGACTCTATCCCCACGTCATTGCTGGAGGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PHTAQCSWREVWVPR*CCRTLSPRHCWRCR Trigger: TCTGCACCTCCAGCAATGACGTGGGGATAGAGTCCTGCAACATCACCGTGGCACCCAGACCTCCCTCCATGAACATTGCGCTGTATGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGACTCCCACCTTCTGAAACTGGTGCTGAAGCTGGCGCTTGCCTGTATGATGCTGCAGTCTGGCTaGGAGGGTGGAACAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RADSHLLKLVLKLALACMMLQSG*EGGTRT Trigger: GGTCCTTGTTCCACCCTCCAAGCCAGACTGCAGCAT...CATACAGGCAAGCGCCAGCTTCAGCACCAGTTTCAGAAGGTGGGAGTCTGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS CCA 90 bp | CTGTATTGTGGGCTCGGAGAGCCCTCTGCAGAGTGGCATGTCAGCTaGATGTTGTTCCCGATCACCATCTCCCCTTGGATGCTGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LYCGLGEPSAEWHVS*MLFPITISPWMLQS Trigger: AGACTGCAGCATCCAAGGGGAGATGGTGATCGGGAACAACATCCAGCTGACATGCCACTCTGCAGAGGGCTCTCCGAGCCCACAATACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
||
| CDS CCA 90 bp | CCACGTCATTGCTGGAGGTGCAGATGTAGTAACCCGCTGTCTCCGTaGAGATGTTCTTCAGCAACAATGGCTCGCCTGAGACTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRHCWRCRCSNPLSP*RCSSATMARLRLAG Trigger: CCCAGCCAGTCTCAGGCGAGCCATTGTTGCTGAAGAACATCTCCACGGAGACAGCGGGTTACTACATCTGCACCTCCAGCAATGACGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CCA 90 bp | TGGTCTGGAGTGCTACGCCCCGAGCTCCACCGATCCTCATGTCTGTaGTCATCTTCGTCTTCCCGCCCTCTGGAAATTTCTTTCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: WSGVLRPELHRSSCL*SSSSSRPLEISFCS Trigger: GGAGCAGAAAGAAATTTCCAGAGGGCGGGAAGACGAAGATGACCACAGACATGAGGATCGGTGGAGCTCGGGGCGTAGCACTCCAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS-3UTR CAA 90 bp | GTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGCACTGTCCATGAGAGCAGATCACCATCTCCCCTaGGATGCTGCAGTCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: VTRCPKSHPGGKALSMRADHHLP*DAAVWL Trigger: AAGCCAGACTGCAGCATCCAAGGGGAGATGGTGATC...TGCTCTCATGGACAGTGCTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS GCA 90 bp | GGCGTTGTAACTCTTCCAGCTGTATTGTGGGCTCGGAGAGCCCTCTaGAGAGTGGCATGTCAGCTGGATGTTGTTCCCGATCACCATCTC | + |
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Preference number: 5 (lower is better) Translates to: GVVTLPAVLWARRAL*RVACQLDVVPDHHL Trigger: GAGATGGTGATCGGGAACAACATCCAGCTGACATGCCACTCTGCAGAGGGCTCTCCGAGCCCACAATACAGCTGGAAGAGTTACAACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS-3UTR CAA 90 bp | CAGACCTTGCTCCAGGGCACCTACTCTAACACAGCAGGAAGTGTAGCTCTGATGACTCTTCCAGCTGTATaGTGGGCTCGGAGAGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: QTLLQGTYSNTAGSVALMTLPAV*WARRAL Trigger: GAGGGCTCTCCGAGCCCACAATACAGCTGGAAGAGT...CATCAGAGCTACACTTCCTGCTGTGTTAGAGTAGGTGCCCTGGAGCAAGGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS-3UTR CAA 90 bp | GGTCTAGGGAGAAGGCCAGACCCTGAGTCAGATTTAGCAATGAGGAAGGGTCCTGATCACCATCTCCCCTaGGATGCTGCAGTCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: GLGRRPDPESDLAMRKGPDHHLP*DAAVWL Trigger: AAGCCAGACTGCAGCATCCAAGGGGAGATGGTGATC...AGGACCCTTCCTCATTGCTAAATCTGACTCAGGGTCTGGCCTTCTCCCTAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGAGTCACCAGGTGTCCCAAGTCACACCCAGGAGGCAAAGCACTGTCCATCGCATCCTCCCTGTCTaGATCTTTGTCATCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: GWSHQVSQVTPRRQSTVHRILPV*IFVILF Trigger: GAAAAGGATGACAAAGATCAAGACAGGGAGGATGCG...ATGGACAGTGCTTTGCCTCCTGGGTGTGACTTGGGACACCTGGTGACTCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS TCA 90 bp | CTGACTTCGGAGAAGCTTATCCCACTGAATGAACCCCTCTCGGTCTaGAACATAGGTGTTGTAGGTGCACGGGAGGGTGACACTCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LTSEKLIPLNEPLSV*NIGVVGAREGDTPS Trigger: GGAAGGAGTGTCACCCTCCCGTGCACCTACAACACCTATGTTTCAGACCGAGAGGGGTTCATTCAGTGGGATAAGCTTCTCCGAAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS-3UTR CAA 90 bp | AGGGCAGACTCCCACCTTCTGAAACTGGTGCTGAAGCTGGCGCTTGCCTGTATGCGCATCCTCCCTGTCTaGATCTTTGTCATCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: RADSHLLKLVLKLALACMRILPV*IFVILF Trigger: GAAAAGGATGACAAAGATCAAGACAGGGAGGATGCG...CATACAGGCAAGCGCCAGCTTCAGCACCAGTTTCAGAAGGTGGGAGTCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS GCA 90 bp | CCCTCTGGAAATTTCTTTCTGCTCCTTTTTAGGCACTTGGTAAGCTaGTCGGTTCGGCCGCGCATCCTCCCTGTCTTGATCTTTGTCATC | + |
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Preference number: 5 (lower is better) Translates to: PSGNFFLLLFRHLVS*SVRPRILPVLIFVI Trigger: GATGACAAAGATCAAGACAGGGAGGATGCGCGGCCGAACCGAGCAGCTTACCAAGTGCCTAAAAAGGAGCAGAAAGAAATTTCCAGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS TCA 90 bp | GCCATTGTCGTCCATGGTCAGCTGGTCGATGGTGATAGAGGCATTTaGCAACTCAGCATCGTTAGATACTCTCACTCGATTCTCATAACG | + |
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Preference number: 5 (lower is better) Translates to: AIVVHGQLVDGDRGI*QLSIVRYSHSILIT Trigger: CGTTATGAGAATCGAGTGAGAGTATCTAACGATGCTGAGTTGTCAAATGCCTCTATCACCATCGACCAGCTGACCATGGACGACAATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS TCA 72 bp | CTCCGTGGAGATGTTCTTCAGCAACAATGGCTCGCCTaGGACTGGCTGGGTGAGGGGCCGCTGCTGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LRGDVLQQQWLA*DWLGEGPLLVL Trigger: CAGAACCAGCAGCGGCCCCTCACCCAGCCAGTCTCAGGCGAGCCATTGTTGCTGAAGAACATCTCCACGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CAA 90 bp | GAGGGGCCGCTGCTGGTTCTGGGCGTTGTAACTCTTCCAGCTGTATaGTGGGCTCGGAGAGCCCTCTGCAGAGTGGCATGTCAGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: EGPLLVLGVVTLPAV*WARRALCRVACQLD Trigger: ATCCAGCTGACATGCCACTCTGCAGAGGGCTCTCCGAGCCCACAATACAGCTGGAAGAGTTACAACGCCCAGAACCAGCAGCGGCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS TCA 72 bp | TCTTCAGCAACAATGGCTCGCCTGAGACTGGCTGGGTaGGGGGCCGCTGCTGGTTCTGGGCGTTGTAACTCT | + |
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Preference number: 6 (lower is better) Translates to: SSATMARLRLAG*GAAAGSGRCNS Trigger: AGAGTTACAACGCCCAGAACCAGCAGCGGCCCCTCACCCAGCCAGTCTCAGGCGAGCCATTGTTGCTGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CCA 72 bp | CATCTCCCCTTGGATGCTGCAGTCTGGCTTGGAGGGTaGAACAAGGACCAAGAGGCGGACTCGAGACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: HLPLDAAVWLGG*NKDQEADSRLG Trigger: GCCAAGTCTCGAGTCCGCCTCTTGGTCCTTGTTCCACCCTCCAAGCCAGACTGCAGCATCCAAGGGGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CCA 72 bp | GTTCCCGATCACCATCTCCCCTTGGATGCTGCAGTCTaGCTTGGAGGGTGGAACAAGGACCAAGAGGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: VPDHHLPLDAAV*LGGWNKDQEAD Trigger: GTCCGCCTCTTGGTCCTTGTTCCACCCTCCAAGCCAGACTGCAGCATCCAAGGGGAGATGGTGATCGGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CCA 72 bp | GGGCTCGGAGAGCCCTCTGCAGAGTGGCATGTCAGCTaGATGTTGTTCCCGATCACCATCTCCCCTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: GLGEPSAEWHVS*MLFPITISPWM Trigger: CATCCAAGGGGAGATGGTGATCGGGAACAACATCCAGCTGACATGCCACTCTGCAGAGGGCTCTCCGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CAA 72 bp | CCGATCACCATCTCCCCTTGGATGCTGCAGTCTGGCTaGGAGGGTGGAACAAGGACCAAGAGGCGGACTCGA | + |
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Preference number: 6 (lower is better) Translates to: PITISPWMLQSG*EGGTRTKRRTR Trigger: TCGAGTCCGCCTCTTGGTCCTTGTTCCACCCTCCAAGCCAGACTGCAGCATCCAAGGGGAGATGGTGATCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CAA 90 bp | ATGTTGTTCCCGATCACCATCTCCCCTTGGATGCTGCAGTCTGGCTaGGAGGGTGGAACAAGGACCAAGAGGCGGACTCGAGACTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: MLFPITISPWMLQSG*EGGTRTKRRTRDLA Trigger: CGCCAAGTCTCGAGTCCGCCTCTTGGTCCTTGTTCCACCCTCCAAGCCAGACTGCAGCATCCAAGGGGAGATGGTGATCGGGAACAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CAA 72 bp | GTAAGCTGCTCGGTTCGGCCGCGCATCCTCCCTGTCTaGATCTTTGTCATCCTTTTCCCGGCAGCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VSCSVRPRILPV*IFVILFPAAAA Trigger: TGCTGCTGCTGCCGGGAAAAGGATGACAAAGATCAAGACAGGGAGGATGCGCGGCCGAACCGAGCAGCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CCA 72 bp | CAGCTGTATTGTGGGCTCGGAGAGCCCTCTGCAGAGTaGCATGTCAGCTGGATGTTGTTCCCGATCACCATC | + |
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Preference number: 6 (lower is better) Translates to: QLYCGLGEPSAE*HVSWMLFPITI Trigger: GATGGTGATCGGGAACAACATCCAGCTGACATGCCACTCTGCAGAGGGCTCTCCGAGCCCACAATACAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CCA 72 bp | GTGCTACGCCCCGAGCTCCACCGATCCTCATGTCTGTaGTCATCTTCGTCTTCCCGCCCTCTGGAAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: VLRPELHRSSCL*SSSSSRPLEIS Trigger: AGAAATTTCCAGAGGGCGGGAAGACGAAGATGACCACAGACATGAGGATCGGTGGAGCTCGGGGCGTAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CAA 72 bp | CTGCTGGTTCTGGGCGTTGTAACTCTTCCAGCTGTATaGTGGGCTCGGAGAGCCCTCTGCAGAGTGGCATGT | + |
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Preference number: 6 (lower is better) Translates to: LLVLGVVTLPAV*WARRALCRVAC Trigger: ACATGCCACTCTGCAGAGGGCTCTCCGAGCCCACAATACAGCTGGAAGAGTTACAACGCCCAGAACCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CAA 72 bp | ATGTTCATGGAGGGAGGTCTGGGTGCCACGGTGATGTaGCAGGACTCTATCCCCACGTCATTGCTGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: MFMEGGLGATVM*QDSIPTSLLEV Trigger: CACCTCCAGCAATGACGTGGGGATAGAGTCCTGCAACATCACCGTGGCACCCAGACCTCCCTCCATGAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CAA 90 bp | AGGCACTTGGTAAGCTGCTCGGTTCGGCCGCGCATCCTCCCTGTCTaGATCTTTGTCATCCTTTTCCCGGCAGCAGCAGCAGTAGACAAT | + |
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Preference number: 6 (lower is better) Translates to: RHLVSCSVRPRILPV*IFVILFPAAAAVDN Trigger: ATTGTCTACTGCTGCTGCTGCCGGGAAAAGGATGACAAAGATCAAGACAGGGAGGATGCGCGGCCGAACCGAGCAGCTTACCAAGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS TCA 72 bp | GGTCTGAAACATAGGTGTTGTAGGTGCACGGGAGGGTaGCACTCCTTCCTCGAGCAGCCCGAAGAATGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GLKHRCCRCTGG*HSFLEQPEECP Trigger: AGGACATTCTTCGGGCTGCTCGAGGAAGGAGTGTCACCCTCCCGTGCACCTACAACACCTATGTTTCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS TCA 72 bp | TCGAGACTTGGCGTTGACATCCTGGTCCGACATCAGTaGCACGGAGCACTCGTAGGTGCCATTGTCGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SRLGVDILVRHQ*HGALVGAIVVH Trigger: ATGGACGACAATGGCACCTACGAGTGCTCCGTGTCACTGATGTCGGACCAGGATGTCAACGCCAAGTCTCGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060833.14 ENSMUST00000166159.2 ENSMUST00000166860.2 |
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| CDS GCA 72 bp | GGATGTTGTTCCCGATCACCATCTCCCCTTGGATGCTaGAGTCTGGCTTGGAGGGTGGAACAAGGACCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GCCSRSPSPLGC*SLAWRVEQGPR Trigger: TCTTGGTCCTTGTTCCACCCTCCAAGCCAGACTGCAGCATCCAAGGGGAGATGGTGATCGGGAACAACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS GCA 72 bp | ACTCTTCCAGCTGTATTGTGGGCTCGGAGAGCCCTCTaGAGAGTGGCATGTCAGCTGGATGTTGTTCCCGAT | + |
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Preference number: 6 (lower is better) Translates to: TLPAVLWARRAL*RVACQLDVVPD Trigger: ATCGGGAACAACATCCAGCTGACATGCCACTCTGCAGAGGGCTCTCCGAGCCCACAATACAGCTGGAAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS GCA 72 bp | TGTTGCAGGACTCTATCCCCACGTCATTGCTGGAGGTaGAGATGTAGTAACCCGCTGTCTCCGTGGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: CCRTLSPRHCWR*RCSNPLSPWRC Trigger: ACATCTCCACGGAGACAGCGGGTTACTACATCTGCACCTCCAGCAATGACGTGGGGATAGAGTCCTGCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CCA 72 bp | TGCTGGAGGTGCAGATGTAGTAACCCGCTGTCTCCGTaGAGATGTTCTTCAGCAACAATGGCTCGCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: CWRCRCSNPLSP*RCSSATMARLR Trigger: TCTCAGGCGAGCCATTGTTGCTGAAGAACATCTCCACGGAGACAGCGGGTTACTACATCTGCACCTCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS CAA 72 bp | CCCTCTGGAAATTTCTTTCTGCTCCTTTTTAGGCACTaGGTAAGCTGCTCGGTTCGGCCGCGCATCCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: PSGNFFLLLFRH*VSCSVRPRILP Trigger: AGGGAGGATGCGCGGCCGAACCGAGCAGCTTACCAAGTGCCTAAAAAGGAGCAGAAAGAAATTTCCAGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS TCA 72 bp | GAGAAGCTTATCCCACTGAATGAACCCCTCTCGGTCTaGAACATAGGTGTTGTAGGTGCACGGGAGGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: EKLIPLNEPLSV*NIGVVGAREGD Trigger: GTCACCCTCCCGTGCACCTACAACACCTATGTTTCAGACCGAGAGGGGTTCATTCAGTGGGATAAGCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS GCA 72 bp | AATTTCTTTCTGCTCCTTTTTAGGCACTTGGTAAGCTaGTCGGTTCGGCCGCGCATCCTCCCTGTCTTGATC | + |
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Preference number: 6 (lower is better) Translates to: NFFLLLFRHLVS*SVRPRILPVLI Trigger: GATCAAGACAGGGAGGATGCGCGGCCGAACCGAGCAGCTTACCAAGTGCCTAAAAAGGAGCAGAAAGAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS TCA 72 bp | TTTCCGTCTGACTTCGGAGAAGCTTATCCCACTGAATaGACCCCTCTCGGTCTGAAACATAGGTGTTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: FPSDFGEAYPTE*TPLGLKHRCCR Trigger: CCTACAACACCTATGTTTCAGACCGAGAGGGGTTCATTCAGTGGGATAAGCTTCTCCGAAGTCAGACGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS TCA 72 bp | GTCCATGGTCAGCTGGTCGATGGTGATAGAGGCATTTaGCAACTCAGCATCGTTAGATACTCTCACTCGATT | + |
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Preference number: 6 (lower is better) Translates to: VHGQLVDGDRGI*QLSIVRYSHSI Trigger: AATCGAGTGAGAGTATCTAACGATGCTGAGTTGTCAAATGCCTCTATCACCATCGACCAGCTGACCATGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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| CDS TCA 72 bp | TCCCATAGATGTATTTCTTTGTCACAAAATTCCAGGTaGCCACTCTTTCCGTCTGACTTCGGAGAAGCTTAT | + |
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Preference number: 6 (lower is better) Translates to: SHRCISLSQNSR*PLFPSDFGEAY Trigger: ATAAGCTTCTCCGAAGTCAGACGGAAAGAGTGGTCACCTGGAATTTTGTGACAAAGAAATACATCTATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060833.14 ENSMUST00000166860.2 |
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