Pregenerated sensors for GP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078810Ensembl transcript IDs: ENSMUST00000108590.4, ENSMUST00000206928.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTCAAAGGCAGCCACATTACCAAAACCCACCCCAGCATGGGCAATaGCTCAAAGGCCAGCCATGTCACCAAAGCCCGTCCCAGCATGGG | + |
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Preference number: 1 (lower is better) Translates to: TQRQPHYQNPPQHGQ*LKGQPCHQSPSQHG Trigger: CCCATGCTGGGACGGGCTTTGGTGACATGGCTGGCCTTTGAGTCATTGCCCATGCTGGGGTGGGTTTTGGTAATGTGGCTGCCTTTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CCA 90 bp | AACTTGCAGGCCATTGGACAGGTTGGAGAGGTTCTACCAGGCAGCTaGGGCCAGTCTGGTCTGAGTGTCTCTCAGCATCCTCGCTATTCT | + |
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Preference number: 1 (lower is better) Translates to: NLQAIGQVGEVLPGS*GQSGLSVSQHPRYS Trigger: AGAATAGCGAGGATGCTGAGAGACACTCAGACCAGACTGGCCCCAGCTGCCTGGTAGAACCTCTCCAACCTGTCCAATGGCCTGCAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR TCA 90 bp | GACAGGTTGGAGAGGTTCTACCAGGCAGCTGGGGCCAGTCTGGTCTaGGTGTCTCTCAGCATCCTCGCTATTCTATATGCTTGGGGAATA | + |
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Preference number: 1 (lower is better) Translates to: DRLERFYQAAGASLV*VSLSILAILYAWGI Trigger: TATTCCCCAAGCATATAGAATAGCGAGGATGCTGAGAGACACTCAGACCAGACTGGCCCCAGCTGCCTGGTAGAACCTCTCCAACCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR TCA 90 bp | CAGTGGGTGCTTTCCTGTGTCAAACTCAACCACAATTCTAGAAGATaGCAGGGACCTCTTATCCAGAGTCCTGACCCAGACTTCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: QWVLSCVKLNHNSRR*QGPLIQSPDPDFWA Trigger: TGCCCAGAAGTCTGGGTCAGGACTCTGGATAAGAGGTCCCTGTCATCTTCTAGAATTGTGGTTGAGTTTGACACAGGAAAGCACCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR GCA 90 bp | GGCCAGTCTGGTCTGAGTGTCTCTCAGCATCCTCGCTATTCTATATaGTTGGGGAATAACAGGCCTAGTATACCTGTCTCAGTCACTGAG | + |
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Preference number: 1 (lower is better) Translates to: GQSGLSVSQHPRYSI*LGNNRPSIPVSVTE Trigger: CTCAGTGACTGAGACAGGTATACTAGGCCTGTTATTCCCCAAGCATATAGAATAGCGAGGATGCTGAGAGACACTCAGACCAGACTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CCA 90 bp | CTCATACCCATCTTCTGTCTGCAAACCACACTCAAAGATGAGAGATaGCTAGAGGACTCGCTGCTATTTACAGGAATGGTACACGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: LIPIFCLQTTLKDER*LEDSLLFTGMVHVC Trigger: GCACACGTGTACCATTCCTGTAAATAGCAGCGAGTCCTCTAGCCATCTCTCATCTTTGAGTGTGGTTTGCAGACAGAAGATGGGTATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CCA 90 bp | AGTTGGTTCCTTCCTGAGTTAAAGGGTCTGCCCTACAGTGTGATATaGTTCACCTCCCTTTGGAACACCCTGCATCTTAATGAGATTCCC | + |
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Preference number: 1 (lower is better) Translates to: SWFLPELKGLPYSVI*FTSLWNTLHLNEIP Trigger: GGGAATCTCATTAAGATGCAGGGTGTTCCAAAGGGAGGTGAACCATATCACACTGTAGGGCAGACCCTTTAACTCAGGAAGGAACCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR TCA 90 bp | AGATTCCTATCAGCCAAGCCATATTTTCCAATCCTCAGCTGTCCCTaGAGAGCAGGTCATAGTGAATATCAGTGGGTGCTTTCCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: RFLSAKPYFPILSCP*RAGHSEYQWVLSCV Trigger: GACACAGGAAAGCACCCACTGATATTCACTATGACCTGCTCTTCAGGGACAGCTGAGGATTGGAAAATATGGCTTGGCTGATAGGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR TCA 90 bp | TCCCGTGTAAAGTTCTTAGAACAAAGTAGACATTGGCTCAACTCTTaGTTGAGCACCAAGAAAGCCCATGACCCACCATCCTACCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: SRVKFLEQSRHWLNS*LSTKKAHDPPSYLV Trigger: AACAAGGTAGGATGGTGGGTCATGGGCTTTCTTGGTGCTCAATCAAGAGTTGAGCCAATGTCTACTTTGTTCTAAGAACTTTACACGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CCA 90 bp | GAGTTAAAGGGTCTGCCCTACAGTGTGATATGGTTCACCTCCCTTTaGAACACCCTGCATCTTAATGAGATTCCCTACAAGATGAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: ELKGLPYSVIWFTSL*NTLHLNEIPYKMKV Trigger: TACTTTCATCTTGTAGGGAATCTCATTAAGATGCAGGGTGTTCCAAAGGGAGGTGAACCATATCACACTGTAGGGCAGACCCTTTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR TCA 90 bp | CCTCCCTTTGGAACACCCTGCATCTTAATGAGATTCCCTACAAGATaGAAGTATTATCTCCAAAGAAACCACTACACGATAGCAGCGAGA | + |
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Preference number: 1 (lower is better) Translates to: PPFGTPCILMRFPTR*KYYLQRNHYTIAAR Trigger: TCTCGCTGCTATCGTGTAGTGGTTTCTTTGGAGATAATACTTTCATCTTGTAGGGAATCTCATTAAGATGCAGGGTGTTCCAAAGGGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CCA 90 bp | TCTCATGACACTGATTTATCTGGATCACCAGCCTCTTCCCACTACTaGCTTCTAAGAACACAGTCTTTACCCTACTGCAGAAAATGTATG | + |
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Preference number: 1 (lower is better) Translates to: SHDTDLSGSPASSHY*LLRTQSLPYCRKCM Trigger: CATACATTTTCTGCAGTAGGGTAAAGACTGTGTTCTTAGAAGCCAGTAGTGGGAAGAGGCTGGTGATCCAGATAAATCAGTGTCATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CCA 90 bp | GGTGTCTGTTCCTATACAATTCTCCAGAACACTGACTTCATTCATTaGCTCCTCCAAACATCATTGATAGATTCCTATCAGCCAAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: GVCSYTILQNTDFIH*LLQTSLIDSYQPSH Trigger: ATGGCTTGGCTGATAGGAATCTATCAATGATGTTTGGAGGAGCCAATGAATGAAGTCAGTGTTCTGGAGAATTGTATAGGAACAGACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR TCA 90 bp | TCACAACCATGTGTGATGGGATCCGATGCCCTCTTCTGGTGTGTCTaGAAACAGCTACAGTGTATTGATATACAGCAAATAAATAAACCT | + |
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Preference number: 1 (lower is better) Translates to: SQPCVMGSDALFWCV*KQLQCIDIQQINKP Trigger: AGGTTTATTTATTTGCTGTATATCAATACACTGTAGCTGTTTTCAGACACACCAGAAGAGGGCATCGGATCCCATCACACATGGTTGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR TCA 90 bp | CTTACTAGTTGTTTTAAGTGGACCATTCAATGGCTCGTAGCACATTaGCAGTATTGGGCAACCATCACCTCTTTCTGGTTACAAAACAGT | + |
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Preference number: 1 (lower is better) Translates to: LTSCFKWTIQWLVAH*QYWATITSFWLQNS Trigger: ACTGTTTTGTAACCAGAAAGAGGTGATGGTTGCCCAATACTGTCAATGTGCTACGAGCCATTGAATGGTCCACTTAAAACAACTAGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CCA 90 bp | CAGATAAGATTAAGACTCTTTCTAATACAGGGAAGCCCTCATGTATaGTTTTGCTTCATATGGTTTCCATCACATGTAATCAACCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: QIRLRLFLIQGSPHV*FCFIWFPSHVINLR Trigger: CCTAAGGTTGATTACATGTGATGGAAACCATATGAAGCAAAACCATACATGAGGGCTTCCCTGTATTAGAAAGAGTCTTAATCTTATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR GCA 90 bp | AGATTAAGACTCTTTCTAATACAGGGAAGCCCTCATGTATGGTTTTaGTTCATATGGTTTCCATCACATGTAATCAACCTTAGGTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: RLRLFLIQGSPHVWF*FIWFPSHVINLRLK Trigger: TTTCAACCTAAGGTTGATTACATGTGATGGAAACCATATGAAGCAAAACCATACATGAGGGCTTCCCTGTATTAGAAAGAGTCTTAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR GCA 90 bp | AGCCCAGAGCTTATAAAGGCAAAAACTACAAGATTGTGTGTATTCTaGCTACATGTCGCAAAGACTTATTTCAACATATATGTCTTACAG | + |
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Preference number: 1 (lower is better) Translates to: SPELIKAKTTRLCVF*LHVAKTYFNIYVLQ Trigger: CTGTAAGACATATATGTTGAAATAAGTCTTTGCGACATGTAGGCAGAATACACACAATCTTGTAGTTTTTGCCTTTATAAGCTCTGGGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CCA 90 bp | CTCTTTCTAATACAGGGAAGCCCTCATGTATGGTTTTGCTTCATATaGTTTCCATCACATGTAATCAACCTTAGGTTGAAAATATTAAGT | + |
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Preference number: 1 (lower is better) Translates to: LFLIQGSPHVWFCFI*FPSHVINLRLKILS Trigger: ACTTAATATTTTCAACCTAAGGTTGATTACATGTGATGGAAACCATATGAAGCAAAACCATACATGAGGGCTTCCCTGTATTAGAAAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR TCA 90 bp | ACATGGTGGCTCACAACCATGTGTGATGGGATCCGATGCCCTCTTCTGGTGTGTCACCAAGAAAGCCCATaGCCCACCATCCTACCTTGT | + |
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Preference number: 2 (lower is better) Translates to: TWWLTTMCDGIRCPLLVCHQESP*PTILPC Trigger: ACAAGGTAGGATGGTGGGTCATGGGCTTTCTTGGTG...ACACACCAGAAGAGGGCATCGGATCCCATCACACATGGTTGTGAGCCACCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCTCTTCCCACTACTGGCTTCTAAGAACACAGTCTTTACCCTACTGCAGATCTTATCCAGAGTCCTaGCCCAGACTTCTGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: PASSHYWLLRTQSLPYCRSYPES*PRLLGT Trigger: AGTGCCCAGAAGTCTGGGTCAGGACTCTGGATAAGA...TCTGCAGTAGGGTAAAGACTGTGTTCTTAGAAGCCAGTAGTGGGAAGAGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CAA 90 bp | TCCCTCCAGCACTGGATTACGGGCCTGCCTGGTGTTAATTTTGTTTaGGTTTCGCAGCCCAAGAACCTTCTCTGTCCCAGGTTAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: SLQHWITGLPGVNFV*VSQPKNLLCPRLRT Trigger: TGTTCTTAACCTGGGACAGAGAAGGTTCTTGGGCTGCGAAACCAAAACAAAATTAACACCAGGCAGGCCCGTAATCCAGTGCTGGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR GCA 90 bp | CATTACAACCTGAGACTGAGACCCACAGAGATCACCCACCAGTCTTTGCTAAGCTACTATGTGCAGGGCTaGTGTTGCACAAGGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: HYNLRLRPTEITHQSLLSYYVQG*CCTRED Trigger: GTCTTCCCTTGTGCAACAGCAGCCCTGCACATAGTA...GCTTAGCAAAGACTGGTGGGTGATCTCTGTGGGTCTCAGTCTCAGGTTGTAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGCTAGAGGACTCGCTGCTATTTACAGGAATGGTACACGTGTGCAGAGGCATGCTAGAGAAGGTTaGAGAAAGGCACAGATCTAT | + |
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Preference number: 2 (lower is better) Translates to: EMARGLAAIYRNGTRVQRHAREG*RKAQIY Trigger: ATAGATCTGTGCCTTTCTTCAACCTTCTCTAGCATG...CCTCTGCACACGTGTACCATTCCTGTAAATAGCAGCGAGTCCTCTAGCCATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR TCA 90 bp | CTTATCCAGAGTCCTGACCCAGACTTCTGGGCACTCGCTGAATTCTCCTATTCAGAGGCAGGAATTTTCTaGATTAATCTTGACCCCATG | + |
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Preference number: 2 (lower is better) Translates to: LIQSPDPDFWALAEFSYSEAGIF*INLDPM Trigger: CATGGGGTCAAGATTAATTCAGAAAATTCCTGCCTC...TGAATAGGAGAATTCAGCGAGTGCCCAGAAGTCTGGGTCAGGACTCTGGATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCTCTTCCCACTACTGGCTTCTAAGAACACAGTCTTTACCCTACTGCAGACTACCTTGTTGGCTCTaGATTTATTCTCCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: PASSHYWLLRTQSLPYCRLPCWL*IYSPHS Trigger: TGAGTGTGGAGAATAAATGCAGAGCCAACAAGGTAG...TCTGCAGTAGGGTAAAGACTGTGTTCTTAGAAGCCAGTAGTGGGAAGAGGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR CCA 90 bp | CATTACAACCTGAGACTGAGACCCACAGAGATCACCCACCAGTCTTTGCTAAGCACCATCCTACCTTGTTaGCTCTGCATTTATTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: HYNLRLRPTEITHQSLLSTILPC*LCIYSP Trigger: TGGAGAATAAATGCAGAGCCAACAAGGTAGGATGGT...GCTTAGCAAAGACTGGTGGGTGATCTCTGTGGGTCTCAGTCTCAGGTTGTAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR TCA 90 bp | CATGACCATTTAGCAAACAGTAGCAGATTACACACTAGGGGCTATAACCTCTCCAACCACACTCAAAGATaGGAGATGGCTAGAGGACTC | + |
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Preference number: 2 (lower is better) Translates to: HDHLANSSRLHTRGYNLSNHTQR*EMARGL Trigger: GAGTCCTCTAGCCATCTCTCATCTTTGAGTGTGGTT...GGAGAGGTTATAGCCCCTAGTGTGTAATCTGCTACTGTTTGCTAAATGGTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCAGTGTTTGATGTCTATTCTTCACCTTACTTTTTGAGACGGATTCTCTATGTGCAGGGCTGCTGTTaGACAAGGGAAGACCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: RSVFDVYSSPYFLRRILYVQGCC*TREDQS Trigger: ACTTTGGTCTTCCCTTGTGCAACAGCAGCCCTGCAC...ATAGAGAATCCGTCTCAAAAAGTAAGGTGAAGAATAGACATCAAACACTGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGCAGGTCATAGTGAATATCAGTGGGTGCTTTCCTGTGTCAAACTCAACCCTCAGCTTCCAGAAATaGTTATTTCCAATCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: EEQVIVNISGCFPVSNSTLSFQK*LFPIFL Trigger: CAGAAAGATTGGAAATAATCATTTCTGGAAGCTGAG...GGTTGAGTTTGACACAGGAAAGCACCCACTGATATTCACTATGACCTGCTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR GCA 90 bp | TCGGGCCATTCCCAAGTCTTTAGTCTTACCAGCCCAGAGCTTATAAAGGCAAAACCTCATGTATGGTTTTaGTTCATATGGTTTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: SGHSQVFSLTSPELIKAKPHVWF*FIWFPS Trigger: TGATGGAAACCATATGAAGCAAAACCATACATGAGG...TTTTGCCTTTATAAGCTCTGGGCTGGTAAGACTAAAGACTTGGGAATGGCCCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CAA 90 bp | ATTCTCCAGAACACTGACTTCATTCATTGGCTCCTCCAAACATCATaGATAGATTCCTATCAGCCAAGCCATATTTTCCAATCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: ILQNTDFIHWLLQTS*IDSYQPSHIFQSSA Trigger: AGCTGAGGATTGGAAAATATGGCTTGGCTGATAGGAATCTATCAATGATGTTTGGAGGAGCCAATGAATGAAGTCAGTGTTCTGGAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR CCA 90 bp | TATACATGTTTTGGATCTGTTCACATTGTTAACCAAGAAGGAAGTTCTCACTGTGTCCATGGTTGTGCATaGATGTCTGGTCAATCCCTC | + |
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Preference number: 2 (lower is better) Translates to: YTCFGSVHIVNQEGSSHCVHGCA*MSGQSL Trigger: GAGGGATTGACCAGACATCCATGCACAACCATGGAC...ACAGTGAGAACTTCCTTCTTGGTTAACAATGTGAACAGATCCAAAACATGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR CCA 90 bp | TCGGGCCATTCCCAAGTCTTTAGTCTTACCAGCCCAGAGCTTATAAAGGCAAAATGGTTTTGCTTCATATaGTTTCCATCACATGTAATC | + |
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Preference number: 2 (lower is better) Translates to: SGHSQVFSLTSPELIKAKWFCFI*FPSHVI Trigger: GATTACATGTGATGGAAACCATATGAAGCAAAACCA...TTTTGCCTTTATAAGCTCTGGGCTGGTAAGACTAAAGACTTGGGAATGGCCCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR CCA 90 bp | CATGACCATTTAGCAAACAGTAGCAGATTACACACTAGGGGCTATAACCTCTCCACCATCACCTCTTTCTaGTTACAAAACAGTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: HDHLANSSRLHTRGYNLSTITSF*LQNSLH Trigger: ATGAAGACTGTTTTGTAACCAGAAAGAGGTGATGGT...GGAGAGGTTATAGCCCCTAGTGTGTAATCTGCTACTGTTTGCTAAATGGTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGAATATCAGTGGGTGCTTTCCTGTGTCAAACTCAACCACAATTCTAGAAGATGGATGTTTATACACTaGCTGCCTGTTCATGAATAT | + |
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Preference number: 2 (lower is better) Translates to: SEYQWVLSCVKLNHNSRRWMFIH*LPVHEY Trigger: ATATTCATGAACAGGCAGGCAGTGTATAAACATCCA...TCTTCTAGAATTGTGGTTGAGTTTGACACAGGAAAGCACCCACTGATATTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CAA 90 bp | TCCAGACATAAGCTTTTGACCAGAGTCTTTTTAATGTTTGTGTATTaGTCTACATGTGTCCAAGTACACCTGAATAAAGGATCCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: SRHKLLTRVFLMFVY*STCVQVHLNKGSLK Trigger: TTTGAGGGATCCTTTATTCAGGTGTACTTGGACACATGTAGACAAATACACAAACATTAAAAAGACTCTGGTCAAAAGCTTATGTCTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CAA 90 bp | TTTAGTCTTACCAGCCCAGAGCTTATAAAGGCAAAAACTACAAGATaGTGTGTATTCTGCCTACATGTCGCAAAGACTTATTTCAACATA | + |
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Preference number: 2 (lower is better) Translates to: FSLTSPELIKAKTTR*CVFCLHVAKTYFNI Trigger: TATGTTGAAATAAGTCTTTGCGACATGTAGGCAGAATACACACAATCTTGTAGTTTTTGCCTTTATAAGCTCTGGGCTGGTAAGACTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR TCA 90 bp | TATACATGTTTTGGATCTGTTCACATTGTTAACCAAGAAGGAAGTTCTCACTGTTTAGCTTTTCTCCCATaGGCTAATATAGGCACTAAC | + |
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Preference number: 2 (lower is better) Translates to: YTCFGSVHIVNQEGSSHCLAFLP*ANIGTN Trigger: GTTAGTGCCTATATTAGCTCATGGGAGAAAAGCTAA...ACAGTGAGAACTTCCTTCTTGGTTAACAATGTGAACAGATCCAAAACATGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR GCA 90 bp | TATACATGTTTTGGATCTGTTCACATTGTTAACCAAGAAGGAAGTTCTCACTGTATGTTACCTACAATGTaGAAGATATCAGCGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: YTCFGSVHIVNQEGSSHCMLPTM*KISAKR Trigger: TCTCTTCGCTGATATCTTGCACATTGTAGGTAACAT...ACAGTGAGAACTTCCTTCTTGGTTAACAATGTGAACAGATCCAAAACATGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CCA 72 bp | GCCATTGGACAGGTTGGAGAGGTTCTACCAGGCAGCTaGGGCCAGTCTGGTCTGAGTGTCTCTCAGCATCCT | + |
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Preference number: 3 (lower is better) Translates to: AIGQVGEVLPGS*GQSGLSVSQHP Trigger: AGGATGCTGAGAGACACTCAGACCAGACTGGCCCCAGCTGCCTGGTAGAACCTCTCCAACCTGTCCAATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR TCA 72 bp | AAGCCCGTCCCAGCATGGGCAATGACTCGAGAAAGCTaGCAACTTGGGGCATGCTGCACAACTTGCAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: KPVPAWAMTRES*QLGACCTTCRP Trigger: TGGCCTGCAAGTTGTGCAGCATGCCCCAAGTTGTCAGCTTTCTCGAGTCATTGCCCATGCTGGGACGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR TCA 72 bp | CAGCCACATTACCAAAACCCACCCCAGCATGGGCAATaGCTCAAAGGCCAGCCATGTCACCAAAGCCCGTCC | + |
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Preference number: 3 (lower is better) Translates to: QPHYQNPPQHGQ*LKGQPCHQSPS Trigger: GGACGGGCTTTGGTGACATGGCTGGCCTTTGAGTCATTGCCCATGCTGGGGTGGGTTTTGGTAATGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR GCA 72 bp | CCCTGTCTCCGTCCCTCCAGCACTGGATTACGGGCCTaGCTGGTGTTAATTTTGTTTTGGTTTCGCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: PCLRPSSTGLRA*LVLILFWFRSP Trigger: TGGGCTGCGAAACCAAAACAAAATTAACACCAGGCAGGCCCGTAATCCAGTGCTGGAGGGACGGAGACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR GCA 72 bp | ATGTCTGGGAAAGGGGGAAGTGGGCCACTAGGGTACTaGTGGAACGAGCTAGGTGCTTACATGTTAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: MSGKGGSGPLGY*WNELGAYMLEA Trigger: TGCCTCTAACATGTAAGCACCTAGCTCGTTCCAGCAGTACCCTAGTGGCCCACTTCCCCCTTTCCCAGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR-3UTR CAA 90 bp | GAGATGGCTAGAGGACTCGCTGCTATTTACAGGAATGGTACACGTGTGCAGAGGTGTGCAGGGCTGCTGTaGCACAAGGGAAGACCAAAG | + |
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Preference number: 3 (lower is better) Translates to: EMARGLAAIYRNGTRVQRCAGLL*HKGRPK Trigger: CTTTGGTCTTCCCTTGTGCAACAGCAGCCCTGCACA...CCTCTGCACACGTGTACCATTCCTGTAAATAGCAGCGAGTCCTCTAGCCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CCA 72 bp | TCTGGGAAAGGGGGAAGTGGGCCACTAGGGTACTGCTaGAACGAGCTAGGTGCTTACATGTTAGAGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SGKGGSGPLGYC*NELGAYMLEAF Trigger: AAATGCCTCTAACATGTAAGCACCTAGCTCGTTCCAGCAGTACCCTAGTGGCCCACTTCCCCCTTTCCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR GCA 72 bp | ACATGGTGGCTCACAACCATGTGTGATGGGATCCGATaGCCTCTTCTGGTGTGTCTGAAAACAGCTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TWWLTTMCDGIR*PLLVCLKTATV Trigger: CACTGTAGCTGTTTTCAGACACACCAGAAGAGGGCATCGGATCCCATCACACATGGTTGTGAGCCACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CCA 72 bp | ACTGGATTACGGGCCTGCCTGGTGTTAATTTTGTTTTaGTTTCGCAGCCCAAGAACCTTCTCTGTCCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TGLRACLVLILF*FRSPRTFSVPG Trigger: ACCTGGGACAGAGAAGGTTCTTGGGCTGCGAAACCAAAACAAAATTAACACCAGGCAGGCCCGTAATCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR GCA 72 bp | AGCTGGAGAGATGGTTTAGGGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SWRDGLGVKSTD*SSRGPEFNSQQ Trigger: TTGTTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCCCTAAACCATCTCTCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CCA 72 bp | GGTCTGCCCTACAGTGTGATATGGTTCACCTCCCTTTaGAACACCCTGCATCTTAATGAGATTCCCTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLPYSVIWFTSL*NTLHLNEIPYK Trigger: CTTGTAGGGAATCTCATTAAGATGCAGGGTGTTCCAAAGGGAGGTGAACCATATCACACTGTAGGGCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR TCA 72 bp | CTTTCCTGTGTCAAACTCAACCACAATTCTAGAAGATaGCAGGGACCTCTTATCCAGAGTCCTGACCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LSCVKLNHNSRR*QGPLIQSPDPD Trigger: GTCTGGGTCAGGACTCTGGATAAGAGGTCCCTGTCATCTTCTAGAATTGTGGTTGAGTTTGACACAGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR TCA 72 bp | CATACCCATCTTCTGTCTGCAAACCACACTCAAAGATaGGAGATGGCTAGAGGACTCGCTGCTATTTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: HTHLLSANHTQR*EMARGLAAIYR Trigger: CCTGTAAATAGCAGCGAGTCCTCTAGCCATCTCTCATCTTTGAGTGTGGTTTGCAGACAGAAGATGGGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR GCA 72 bp | GAGGACTCGCTGCTATTTACAGGAATGGTACACGTGTaGAGAGGTGAACAAGCAAAGCAATGCTTGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EDSLLFTGMVHV*RGEQAKQCLFS Trigger: TGAGAACAAGCATTGCTTTGCTTGTTCACCTCTGCACACGTGTACCATTCCTGTAAATAGCAGCGAGTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CCA 72 bp | CTTCCTGAGTTAAAGGGTCTGCCCTACAGTGTGATATaGTTCACCTCCCTTTGGAACACCCTGCATCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LPELKGLPYSVI*FTSLWNTLHLN Trigger: ATTAAGATGCAGGGTGTTCCAAAGGGAGGTGAACCATATCACACTGTAGGGCAGACCCTTTAACTCAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGGGCCATTCCCAAGTCTTTAGTCTTACCAGCCCAGAGCTTATAAAGGCAAAAACATTGGCTCAACTCTaGATTGAGCACCAAGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGHSQVFSLTSPELIKAKTLAQL*IEHQES Trigger: GCTTTCTTGGTGCTCAATCAAGAGTTGAGCCAATGT...TTTTGCCTTTATAAGCTCTGGGCTGGTAAGACTAAAGACTTGGGAATGGCCCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATGGCTAGAGGACTCGCTGCTATTTACAGGAATGGTACACGTGTGCAGAGGGACATAAGATTGCATTaGTTTTTGAGATATGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: EMARGLAAIYRNGTRVQRDIRLH*FLRYGL Trigger: GAGCCCATATCTCAAAAACAAATGCAATCTTATGTC...CCTCTGCACACGTGTACCATTCCTGTAAATAGCAGCGAGTCCTCTAGCCATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR TCA 72 bp | GCTGCTATTTACAGGAATGGTACACGTGTGCAGAGGTaGACAAGCAAAGCAATGCTTGTTCTCATGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: AAIYRNGTRVQR*TSKAMLVLMTL Trigger: CAGTGTCATGAGAACAAGCATTGCTTTGCTTGTTCACCTCTGCACACGTGTACCATTCCTGTAAATAGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CCA 72 bp | ACTGATTTATCTGGATCACCAGCCTCTTCCCACTACTaGCTTCTAAGAACACAGTCTTTACCCTACTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TDLSGSPASSHY*LLRTQSLPYCR Trigger: TCTGCAGTAGGGTAAAGACTGTGTTCTTAGAAGCCAGTAGTGGGAAGAGGCTGGTGATCCAGATAAATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CCA 72 bp | GTGTGGGTAAATCTAACACCAATGGTTCTATCACCCTaGCTATTTCAGGTGATGAATCCGGGGTCAATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VWVNLTPMVLSP*LFQVMNPGSIR Trigger: TCTGATTGACCCCGGATTCATCACCTGAAATAGCCAGGGTGATAGAACCATTGGTGTTAGATTTACCCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTACAACCTGAGACTGAGACCCACAGAGATCACCCACCAGTCTTTGCTAAGCTTGGATCTGTTCACATaGTTAACCAAGAAGGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HYNLRLRPTEITHQSLLSLDLFT*LTKKEV Trigger: AACTTCCTTCTTGGTTAACAATGTGAACAGATCCAA...GCTTAGCAAAGACTGGTGGGTGATCTCTGTGGGTCTCAGTCTCAGGTTGTAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR TCA 72 bp | AAGTTCTTAGAACAAAGTAGACATTGGCTCAACTCTTaGTTGAGCACCAAGAAAGCCCATGACCCACCATCC | + |
|
Preference number: 3 (lower is better) Translates to: KFLEQSRHWLNS*LSTKKAHDPPS Trigger: GGATGGTGGGTCATGGGCTTTCTTGGTGCTCAATCAAGAGTTGAGCCAATGTCTACTTTGTTCTAAGAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR GCA 72 bp | GTCCCTGAAGAGCAGGTCATAGTGAATATCAGTGGGTaGTTTCCTGTGTCAAACTCAACCACAATTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VPEEQVIVNISG*FPVSNSTTILE Trigger: TTCTAGAATTGTGGTTGAGTTTGACACAGGAAAGCACCCACTGATATTCACTATGACCTGCTCTTCAGGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CCA 72 bp | ATCTTCTGTCTGCAAACCACACTCAAAGATGAGAGATaGCTAGAGGACTCGCTGCTATTTACAGGAATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: IFCLQTTLKDER*LEDSLLFTGMV Trigger: TACCATTCCTGTAAATAGCAGCGAGTCCTCTAGCCATCTCTCATCTTTGAGTGTGGTTTGCAGACAGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGGGCCATTCCCAAGTCTTTAGTCTTACCAGCCCAGAGCTTATAAAGGCAAAACCAATCTTTCTGAATTaGACTATTCTGGCCTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGHSQVFSLTSPELIKAKPIFLN*TILAFQ Trigger: CTGAAAGGCCAGAATAGTCAAATTCAGAAAGATTGG...TTTTGCCTTTATAAGCTCTGGGCTGGTAAGACTAAAGACTTGGGAATGGCCCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR TCA 72 bp | ACACAGACTATTAGAGAACAAGAGTCTGTGCACAAATaGTGGAACAGGTCAGCTGTGAGAGGCAGGAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: TQTIREQESVHK*WNRSAVRGRNF Trigger: AAAATTCCTGCCTCTCACAGCTGACCTGTTCCATCATTTGTGCACAGACTCTTGTTCTCTAATAGTCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CCA 72 bp | GGTAAGGGGGTTCCTGAAGAAAATAACCAAAGGTTATaGGTGTCTGTTCCTATACAATTCTCCAGAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: GKGVPEENNQRL*VSVPIQFSRTL Trigger: CAGTGTTCTGGAGAATTGTATAGGAACAGACACCCATAACCTTTGGTTATTTTCTTCAGGAACCCCCTTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR-3UTR CAA 90 bp | TATACATGTTTTGGATCTGTTCACATTGTTAACCAAGAAGGAAGTTCTCACTGTCACCATCCTACCTTGTaGGCTCTGCATTTATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YTCFGSVHIVNQEGSSHCHHPTL*ALHLFS Trigger: GGAGAATAAATGCAGAGCCAACAAGGTAGGATGGTG...ACAGTGAGAACTTCCTTCTTGGTTAACAATGTGAACAGATCCAAAACATGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR TCA 72 bp | TATGGGTGTCTGTTCCTATACAATTCTCCAGAACACTaGCTTCATTCATTGGCTCCTCCAAACATCATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: YGCLFLYNSPEH*LHSLAPPNIID Trigger: ATCAATGATGTTTGGAGGAGCCAATGAATGAAGTCAGTGTTCTGGAGAATTGTATAGGAACAGACACCCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR GCA 72 bp | CTATTCTTCACCTTACTTTTTGAGACGGATTCTCTATaGTTAGAACTCCCTGATTTGGCTAAACTGACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LFFTLLFETDSL*LELPDLAKLTA Trigger: TGCAGTCAGTTTAGCCAAATCAGGGAGTTCTAAGCATAGAGAATCCGTCTCAAAAAGTAAGGTGAAGAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR GCA 72 bp | CTCTTTCTAATACAGGGAAGCCCTCATGTATGGTTTTaGTTCATATGGTTTCCATCACATGTAATCAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: LFLIQGSPHVWF*FIWFPSHVINL Trigger: AAGGTTGATTACATGTGATGGAAACCATATGAAGCAAAACCATACATGAGGGCTTCCCTGTATTAGAAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CCA 72 bp | ATACAGGGAAGCCCTCATGTATGGTTTTGCTTCATATaGTTTCCATCACATGTAATCAACCTTAGGTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IQGSPHVWFCFI*FPSHVINLRLK Trigger: TTTCAACCTAAGGTTGATTACATGTGATGGAAACCATATGAAGCAAAACCATACATGAGGGCTTCCCTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR TCA 72 bp | AACCTTGTGGATGTTTATACACTGCCTGCCTGTTCATaGATATGTAATAGCCATTTTGTTTGTCAGATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NLVDVYTLPACS*ICNSHFVCQIN Trigger: GTTGATCTGACAAACAAAATGGCTATTACATATTCATGAACAGGCAGGCAGTGTATAAACATCCACAAGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CCA 72 bp | TTAAGACTCTTTCTAATACAGGGAAGCCCTCATGTATaGTTTTGCTTCATATGGTTTCCATCACATGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: LRLFLIQGSPHV*FCFIWFPSHVI Trigger: GATTACATGTGATGGAAACCATATGAAGCAAAACCATACATGAGGGCTTCCCTGTATTAGAAAGAGTCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR GCA 72 bp | TCAGAAAGTAAACTAACCTTGTGGATGTTTATACACTaGCTGCCTGTTCATGAATATGTAATAGCCATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SESKLTLWMFIH*LPVHEYVIAIL Trigger: CAAAATGGCTATTACATATTCATGAACAGGCAGGCAGTGTATAAACATCCACAAGGTTAGTTTACTTTCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR TCA 90 bp | CATTACAACCTGAGACTGAGACCCACAGAGATCACCCACCAGTCTTTGCTAAGCCGGTACGTCCCACTGTaGGCAGCAGTCACTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HYNLRLRPTEITHQSLLSRYVPL*AAVTVM Trigger: CATCACAGTGACTGCTGCTCACAGTGGGACGTACCG...GCTTAGCAAAGACTGGTGGGTGATCTCTGTGGGTCTCAGTCTCAGGTTGTAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTCTTCCCACTACTGGCTTCTAAGAACACAGTCTTTACCCTACTGCAGAGCACCTCAGAATAACTaGCTGACCCAGGGGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PASSHYWLLRTQSLPYCRAPQNN*LTQGYQ Trigger: CTGGTACCCCTGGGTCAGTCAGTTATTCTGAGGTGC...TCTGCAGTAGGGTAAAGACTGTGTTCTTAGAAGCCAGTAGTGGGAAGAGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CAA 72 bp | CACTGGATTACGGGCCTGCCTGGTGTTAATTTTGTTTaGGTTTCGCAGCCCAAGAACCTTCTCTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HWITGLPGVNFV*VSQPKNLLCPR Trigger: CCTGGGACAGAGAAGGTTCTTGGGCTGCGAAACCAAAACAAAATTAACACCAGGCAGGCCCGTAATCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAATATCAGTGGGTGCTTTCCTGTGTCAAACTCAACCACAATTCTAGAAGACCTGGAGGGAAGGCTTaGGGAGTGGGCCACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SEYQWVLSCVKLNHNSRRPGGKA*GVGHSV Trigger: CACAGAGTGGCCCACTCCCCAAGCCTTCCCTCCAGG...TCTTCTAGAATTGTGGTTGAGTTTGACACAGGAAAGCACCCACTGATATTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAATATCAGTGGGTGCTTTCCTGTGTCAAACTCAACCACAATTCTAGAAGACCGTGGGTACCTGGCTaGGAGTGGCAGAGAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEYQWVLSCVKLNHNSRRPWVPG*EWQRVQ Trigger: CTGGACTCTCTGCCACTCCCAGCCAGGTACCCACGG...TCTTCTAGAATTGTGGTTGAGTTTGACACAGGAAAGCACCCACTGATATTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CAA 72 bp | CTGAGACTGAGACCCACAGAGATCACCCACCAGTCTTaGCTAAGCTCTTCCCTTGTGCTGTACCTCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRLRPTEITHQS*LSSSLVLYLIN Trigger: GTTTATGAGGTACAGCACAAGGGAAGAGCTTAGCAAAGACTGGTGGGTGATCTCTGTGGGTCTCAGTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR CCA 90 bp | CATTACAACCTGAGACTGAGACCCACAGAGATCACCCACCAGTCTTTGCTAAGCAAACTGTATGGGCTCTaGCACTTCAGAGTCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: HYNLRLRPTEITHQSLLSKLYGL*HFRVTS Trigger: GGATGTGACTCTGAAGTGCCAGAGCCCATACAGTTT...GCTTAGCAAAGACTGGTGGGTGATCTCTGTGGGTCTCAGTCTCAGGTTGTAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTCTTCCCACTACTGGCTTCTAAGAACACAGTCTTTACCCTACTGCAGAAGATGGAAGGTCTCCTaGAGGATTCTGTCACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PASSHYWLLRTQSLPYCRRWKVS*RILSQE Trigger: TTCCTGTGACAGAATCCTCCAGGAGACCTTCCATCT...TCTGCAGTAGGGTAAAGACTGTGTTCTTAGAAGCCAGTAGTGGGAAGAGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR TCA 90 bp | CATGACCATTTAGCAAACAGTAGCAGATTACACACTAGGGGCTATAACCTCTCCACTGCTGAGCTGGGATaGGCTGAGAGTGAGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HDHLANSSRLHTRGYNLSTAELG*AESEGL Trigger: TAAACCCTCACTCTCAGCTCATCCCAGCTCAGCAGT...GGAGAGGTTATAGCCCCTAGTGTGTAATCTGCTACTGTTTGCTAAATGGTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR CCA 90 bp | TATACATGTTTTGGATCTGTTCACATTGTTAACCAAGAAGGAAGTTCTCACTGTGGGGTACCAGGGAACTaGGCTGAGCCTGGAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YTCFGSVHIVNQEGSSHCGVPGN*AEPGGK Trigger: CTTCCCTCCAGGCTCAGCCCAGTTCCCTGGTACCCC...ACAGTGAGAACTTCCTTCTTGGTTAACAATGTGAACAGATCCAAAACATGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CAA 72 bp | GTGGACCATTCAATGGCTCGTAGCACATTGACAGTATaGGGCAACCATCACCTCTTTCTGGTTACAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VDHSMARSTLTV*GNHHLFLVTKQ Trigger: CTGTTTTGTAACCAGAAAGAGGTGATGGTTGCCCAATACTGTCAATGTGCTACGAGCCATTGAATGGTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CAA 72 bp | CCATGGCCAAGAATGAGTTTTAATGAAAAGAGGCTTTaGTTAGAACTGACACCTGGACTGACTGGTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWPRMSFNEKRL*LELTPGLTGAR Trigger: CCTGGCACCAGTCAGTCCAGGTGTCAGTTCTAACAAAAGCCTCTTTTCATTAAAACTCATTCTTGGCCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTCTTCCCACTACTGGCTTCTAAGAACACAGTCTTTACCCTACTGCAGAACTTCTTTCCATGGTTaGAATGAAGAGAAAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PASSHYWLLRTQSLPYCRTSFHG*NEEKVL Trigger: CAAGACTTTCTCTTCATTCCAACCATGGAAAGAAGT...TCTGCAGTAGGGTAAAGACTGTGTTCTTAGAAGCCAGTAGTGGGAAGAGGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CAA 72 bp | ACCAATATCTTCAGCAACTCAGTAGCATATTCATGTTaGCATGTCAGGGAGGCACCCAGGGGCTTATTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TNIFSNSVAYSC*HVREAPRGLLK Trigger: TTTCAATAAGCCCCTGGGTGCCTCCCTGACATGCAAACATGAATATGCTACTGAGTTGCTGAAGATATTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CAA 72 bp | TTGTTAACCAAGAAGGAAGTTCTCACTGTGAGTACTTaGGTACGGCGTACAGGAAGACCATCCTTCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLTKKEVLTVST*VRRTGRPSFHN Trigger: ATTGTGGAAGGATGGTCTTCCTGTACGCCGTACCAAAGTACTCACAGTGAGAACTTCCTTCTTGGTTAACAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CAA 72 bp | CGAGAATGCAGAGCAGGAAATGAATGTGGCAACTGTTaGGGTGTACCTATTTCTATAGCCCTACAAGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RECRAGNECGNC*GVPISIALQGY Trigger: ATAGCCTTGTAGGGCTATAGAAATAGGTACACCCAAACAGTTGCCACATTCATTTCCTGCTCTGCATTCTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR TCA 90 bp | AGTATGTCCATGTCTGTGGCTCTAGTGGTGATGTCCATGGTTGTGCATGGATGTTTTCCATGGTTGGAATaGAGAGAAAGTCTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SMSMSVALVVMSMVVHGCFPWLE*RESLDL Trigger: AAGATCAAGACTTTCTCTTCATTCCAACCATGGAAA...ACATCCATGCACAACCATGGACATCACCACTAGAGCCACAGACATGGACATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR GCA 90 bp | TATACATGTTTTGGATCTGTTCACATTGTTAACCAAGAAGGAAGTTCTCACTGTTCAGAGTCACATCCCTaGCTTGAGGGACTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTCFGSVHIVNQEGSSHCSESHP*LEGLLS Trigger: GCTCAGCAGTCCCTCAAGGCAGGGATGTGACTCTGA...ACAGTGAGAACTTCCTTCTTGGTTAACAATGTGAACAGATCCAAAACATGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAATATCAGTGGGTGCTTTCCTGTGTCAAACTCAACCACAATTCTAGAAGATTCATCAAAACTGTATaGGCTCTGGCACTTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SEYQWVLSCVKLNHNSRRFIKTV*ALALQS Trigger: ACTCTGAAGTGCCAGAGCCCATACAGTTTTGATGAA...TCTTCTAGAATTGTGGTTGAGTTTGACACAGGAAAGCACCCACTGATATTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CAA 72 bp | CACTGCCTGCCTGTTCATGAATATGTAATAGCCATTTaGTTTGTCAGATCAACTGTCATAGACATTCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HCLPVHEYVIAI*FVRSTVIDILV Trigger: GACTAGAATGTCTATGACAGTTGATCTGACAAACAAAATGGCTATTACATATTCATGAACAGGCAGGCAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CAA 72 bp | ACTCTTTCTAATACAGGGAAGCCCTCATGTATGGTTTaGCTTCATATGGTTTCCATCACATGTAATCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSNTGKPSCMV*LHMVSITCNQP Trigger: AGGTTGATTACATGTGATGGAAACCATATGAAGCAAAACCATACATGAGGGCTTCCCTGTATTAGAAAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
||
| 3UTR CAA 72 bp | AACACTGACTTCATTCATTGGCTCCTCCAAACATCATaGATAGATTCCTATCAGCCAAGCCATATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NTDFIHWLLQTS*IDSYQPSHIFQ Trigger: TTGGAAAATATGGCTTGGCTGATAGGAATCTATCAATGATGTTTGGAGGAGCCAATGAATGAAGTCAGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CAA 72 bp | CACACTAGGGGCTATAACCTCTCCAGACATAAGCTTTaGACCAGAGTCTTTTTAATGTTTGTGTATTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: HTRGYNLSRHKL*TRVFLMFVYLS Trigger: AGACAAATACACAAACATTAAAAAGACTCTGGTCAAAAGCTTATGTCTGGAGAGGTTATAGCCCCTAGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CAA 72 bp | ATCCCACACTATTACATTTCAGAAAGTAAACTAACCTaGTGGATGTTTATACACTGCCTGCCTGTTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: IPHYYISESKLT*WMFIHCLPVHE Trigger: TTCATGAACAGGCAGGCAGTGTATAAACATCCACAAGGTTAGTTTACTTTCTGAAATGTAATAGTGTGGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CAA 72 bp | TCAACATATATGTCTTACAGTTGTCCAAGTCATCTTTaGAGCAAAGTAAGAAAGCTTGATTGCAAAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: STYMSYSCPSHL*SKVRKLDCKSR Trigger: TCTGCTTTTGCAATCAAGCTTTCTTACTTTGCTCAAAAGATGACTTGGACAACTGTAAGACATATATGTTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| 3UTR CAA 72 bp | GTCGCAAAGACTTATTTCAACATATATGTCTTACAGTaGTCCAAGTCATCTTTTGAGCAAAGTAAGAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: VAKTYFNIYVLQ*SKSSFEQSKKA Trigger: AGCTTTCTTACTTTGCTCAAAAGATGACTTGGACAACTGTAAGACATATATGTTGAAATAAGTCTTTGCGAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| CDS CCA 90 bp | GGGTACCAGGGAACTGGGCTGAGCCTGGAGGGAAGGCTTGGGGAGTaGGCCACTCTGTGTTTGGATCACTTGCAGTACACACAGCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: GYQGTGLSLEGRLGE*ATLCLDHLQYTQPN Trigger: ATTGGGCTGTGTGTACTGCAAGTGATCCAAACACAGAGTGGCCCACTCCCCAAGCCTTCCCTCCAGGCTCAGCCCAGTTCCCTGGTACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS GCA 90 bp | AGTGGGAGGGGTGGTAGTGGCCTTTGCAAAGCTCTCATCCTGTGTTaGAGGCATTTCTTCCGACTGTGCCAATCCTCTGCTAGAAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SGRGGSGLCKALILC*RHFFRLCQSSARSP Trigger: GGGGCTTCTAGCAGAGGATTGGCACAGTCGGAAGAAATGCCTGCAACACAGGATGAGAGCTTTGCAAAGGCCACTACCACCCCTCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS GCA 90 bp | TGGAGGGAAGGCTTGGGGAGTGGGCCACTCTGTGTTTGGATCACTTaGAGTACACACAGCCCAATACAGAAGAAAGTGGGTGAGGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: WREGLGSGPLCVWIT*STHSPIQKKVGEAG Trigger: TCCAGCCTCACCCACTTTCTTCTGTATTGGGCTGTGTGTACTGCAAGTGATCCAAACACAGAGTGGCCCACTCCCCAAGCCTTCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS-3UTR CAA 90 bp | TCGGGCCATTCCCAAGTCTTTAGTCTTACCAGCCCAGAGCTTATAAAGGCAAAAGCCTGGAGGGAAGGCTaGGGGAGTGGGCCACTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SGHSQVFSLTSPELIKAKAWREG*GSGPLC Trigger: ACAGAGTGGCCCACTCCCCAAGCCTTCCCTCCAGGC...TTTTGCCTTTATAAGCTCTGGGCTGGTAAGACTAAAGACTTGGGAATGGCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| CDS GCA 90 bp | ATTCATCAAAACTGTATGGGCTCTGGCACTTCAGAGTCACATCCCTaGCTTGAGGGACTGCTGAGCTGGGATGAGCTGAGAGTGAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: IHQNCMGSGTSESHP*LEGLLSWDELRVRV Trigger: AACCCTCACTCTCAGCTCATCCCAGCTCAGCAGTCCCTCAAGGCAGGGATGTGACTCTGAAGTGCCAGAGCCCATACAGTTTTGATGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS TCA 90 bp | CTCTGGAGAGGCAGTGATATTCATAGGCTTTTCTGTCACAGGAAATaGTTCTTCCGTGGGTACCTGGCTGGGAGTGGCAGAGAGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: LWRGSDIHRLFCHRK*FFRGYLAGSGRESS Trigger: ACTGGACTCTCTGCCACTCCCAGCCAGGTACCCACGGAAGAATCATTTCCTGTGACAGAAAAGCCTATGAATATCACTGCCTCTCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108590.4 |
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| CDS CCA 90 bp | TTCATAGGCTTTTCTGTCACAGGAAATGATTCTTCCGTGGGTACCTaGCTGGGAGTGGCAGAGAGTCCAGTAACCACAAGCACTAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: FIGFSVTGNDSSVGT*LGVAESPVTTSTRG Trigger: CCCTCTAGTGCTTGTGGTTACTGGACTCTCTGCCACTCCCAGCCAGGTACCCACGGAAGAATCATTTCCTGTGACAGAAAAGCCTATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108590.4 |
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| CDS-3UTR CAA 90 bp | GAGATGGCTAGAGGACTCGCTGCTATTTACAGGAATGGTACACGTGTGCAGAGGAGCTCTCATCCTGTGTaGCAGGCATTTCTTCCGACT | + |
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Preference number: 5 (lower is better) Translates to: EMARGLAAIYRNGTRVQRSSHPV*QAFLPT Trigger: AGTCGGAAGAAATGCCTGCAACACAGGATGAGAGCT...CCTCTGCACACGTGTACCATTCCTGTAAATAGCAGCGAGTCCTCTAGCCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| CDS-3UTR CAA 90 bp | CCAGCCTCTTCCCACTACTGGCTTCTAAGAACACAGTCTTTACCCTACTGCAGAGTGATGATGGGGAAATaGGCCCGGTACCATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: PASSHYWLLRTQSLPYCRVMMGK*ARYHFS Trigger: TGAGAAATGGTACCGGGCCAATTTCCCCATCATCAC...TCTGCAGTAGGGTAAAGACTGTGTTCTTAGAAGCCAGTAGTGGGAAGAGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| CDS GCA 90 bp | CTTTGCAAAGCTCTCATCCTGTGTTGCAGGCATTTCTTCCGACTGTaGCAATCCTCTGCTAGAAGCCCCAACAAAATTATTATAATCGTG | + |
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Preference number: 5 (lower is better) Translates to: LCKALILCCRHFFRL*QSSARSPNKIIIIV Trigger: CACGATTATAATAATTTTGTTGGGGCTTCTAGCAGAGGATTGGCACAGTCGGAAGAAATGCCTGCAACACAGGATGAGAGCTTTGCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS-3UTR CAA 90 bp | AGTATGTCCATGTCTGTGGCTCTAGTGGTGATGTCCATGGTTGTGCATGGATGTAATGAAGAGAAAGTCTaGATCTTCATACTTCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SMSMSVALVVMSMVVHGCNEEKV*IFILLR Trigger: CCGGAGAAGTATGAAGATCAAGACTTTCTCTTCATT...ACATCCATGCACAACCATGGACATCACCACTAGAGCCACAGACATGGACATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| CDS-3UTR CAA 90 bp | AAGAAAGGCACAGATCTATCATGTTACCTACAATGTGCAAGATATCAGCGAAGATGGGCCACTCTGTGTTaGGATCACTTGCAGTACACA | + |
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Preference number: 5 (lower is better) Translates to: KKGTDLSCYLQCARYQRRWATLC*DHLQYT Trigger: TGTGTACTGCAAGTGATCCAAACACAGAGTGGCCCA...TCTTCGCTGATATCTTGCACATTGTAGGTAACATGATAGATCTGTGCCTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| CDS TCA 90 bp | CGTCCAGCATTACTTCTTTCCATGGTTGGAATGAAGAGAAAGTCTTaGTCTTCATACTTCTCCGGTTTCAGTTTCTCCAGGCGATATAAA | + |
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Preference number: 5 (lower is better) Translates to: RPALLLSMVGMKRKS*SSYFSGFSFSRRYK Trigger: TTTATATCGCCTGGAGAAACTGAAACCGGAGAAGTATGAAGATCAAGACTTTCTCTTCATTCCAACCATGGAAAGAAGTAATGCTGGACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS TCA 90 bp | AAGAGCATCGATACCGTCCAGCATTACTTCTTTCCATGGTTGGAATaGAGAGAAAGTCTTGATCTTCATACTTCTCCGGTTTCAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: KSIDTVQHYFFPWLE*RESLDLHTSPVSVS Trigger: AGAAACTGAAACCGGAGAAGTATGAAGATCAAGACTTTCTCTTCATTCCAACCATGGAAAGAAGTAATGCTGGACGGTATCGATGCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS CAA 90 bp | GGGCTGAGCCTGGAGGGAAGGCTTGGGGAGTGGGCCACTCTGTGTTaGGATCACTTGCAGTACACACAGCCCAATACAGAAGAAAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GLSLEGRLGEWATLC*DHLQYTQPNTEESG Trigger: CCCACTTTCTTCTGTATTGGGCTGTGTGTACTGCAAGTGATCCAAACACAGAGTGGCCCACTCCCCAAGCCTTCCCTCCAGGCTCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS GCA 72 bp | AACTGTATGGGCTCTGGCACTTCAGAGTCACATCCCTaGCTTGAGGGACTGCTGAGCTGGGATGAGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: NCMGSGTSESHP*LEGLLSWDELR Trigger: TCTCAGCTCATCCCAGCTCAGCAGTCCCTCAAGGCAGGGATGTGACTCTGAAGTGCCAGAGCCCATACAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS TCA 72 bp | GATGGAAGGTCTCCTGGAGGATTCTGTCACAGGAAATaGTTCTTCCGTGGGTACCTGGCTGGGAGTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: DGRSPGGFCHRK*FFRGYLAGSGR Trigger: TCTGCCACTCCCAGCCAGGTACCCACGGAAGAATCATTTCCTGTGACAGAATCCTCCAGGAGACCTTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| CDS CCA 72 bp | TGGAGGGAAGGCTTGGGGAGTGGGCCACTCTGTGTTTaGATCACTTGCAGTACACACAGCCCAATACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: WREGLGSGPLCV*ITCSTHSPIQK Trigger: CTTCTGTATTGGGCTGTGTGTACTGCAAGTGATCCAAACACAGAGTGGCCCACTCCCCAAGCCTTCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS CCA 72 bp | TCGTGGCACCAAGGCATATCCGGACCAGATTCCCCTTaGCATAGTGCTGATGAGCAAAACCAAATGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SWHQGISGPDSP*HSADEQNQMEG Trigger: GCCCTCCATTTGGTTTTGCTCATCAGCACTATGCCAAGGGGAATCTGGTCCGGATATGCCTTGGTGCCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS CAA 72 bp | CTGGAGGGAAGGCTTGGGGAGTGGGCCACTCTGTGTTaGGATCACTTGCAGTACACACAGCCCAATACAGAA | + |
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Preference number: 6 (lower is better) Translates to: LEGRLGEWATLC*DHLQYTQPNTE Trigger: TTCTGTATTGGGCTGTGTGTACTGCAAGTGATCCAAACACAGAGTGGCCCACTCCCCAAGCCTTCCCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS GCA 72 bp | GGCTTGGGGAGTGGGCCACTCTGTGTTTGGATCACTTaGAGTACACACAGCCCAATACAGAAGAAAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GLGSGPLCVWIT*STHSPIQKKVG Trigger: ACCCACTTTCTTCTGTATTGGGCTGTGTGTACTGCAAGTGATCCAAACACAGAGTGGCCCACTCCCCAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS CCA 72 bp | GATTCTGTCACAGGAAATGATTCTTCCGTGGGTACCTaGCTGGGAGTGGCAGAGAGTCCAGTAACCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: DSVTGNDSSVGT*LGVAESPVTTS Trigger: GCTTGTGGTTACTGGACTCTCTGCCACTCCCAGCCAGGTACCCACGGAAGAATCATTTCCTGTGACAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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| CDS CAA 72 bp | AGGCTTGGGGAGTGGGCCACTCTGTGTTTGGATCACTaGCAGTACACACAGCCCAATACAGAAGAAAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RLGEWATLCLDH*QYTQPNTEESG Trigger: CCCACTTTCTTCTGTATTGGGCTGTGTGTACTGCAAGTGATCCAAACACAGAGTGGCCCACTCCCCAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108590.4 ENSMUST00000206928.2 |
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| CDS CAA 72 bp | GCAGTGATATTCATAGGCTTTTCAGTTGTAGATATTTaGTTTGTGGGTAAGATGGAAGGTCTCCTGGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AVIFIGFSVVDI*FVGKMEGLLED Trigger: ATCCTCCAGGAGACCTTCCATCTTACCCACAAACAAAATATCTACAACTGAAAAGCCTATGAATATCACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206928.2 |
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