Pregenerated sensors for GP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047953Ensembl transcript IDs: ENSMUST00000061190.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAGGCACCCAGCGCTaGACAGTTGGACCTGATGAGCCAAGTCCCGTCGAACCCCCACCC | + |
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Preference number: 1 (lower is better) Translates to: SETKKGLLSPLGTQR*TVGPDEPSPVEPPP Trigger: GGGTGGGGGTTCGACGGGACTTGGCTCATCAGGTCCAACTGTGCAGCGCTGGGTGCCTAGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR CCA 90 bp | CGTTTTAAGCCGGTGTTCCTTCAGCAAATGTTACTCAACCCTTGCTaGGTCCCGGAGAGGTCTTGCCCACTGGCAGGATGTGTCCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: RFKPVFLQQMLLNPC*VPERSCPLAGCVLK Trigger: TTTGAGGACACATCCTGCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACATTTGCTGAAGGAACACCGGCTTAAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR CCA 90 bp | AAATGTTACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCCACTaGCAGGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: KCYSTLAGSRRGLAH*QDVSSNSETKKGLL Trigger: GAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCCTGCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR-3UTR GCA 90 bp | TTACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCCACTGGCAGGATGTGTCCGCCAGCATCCTGACTaGATTCTCCTTGGGGCCCCG | + |
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Preference number: 2 (lower is better) Translates to: LLNPCWVPERSCPLAGCVRQHPD*ILLGAP Trigger: CGGGGCCCCAAGGAGAATGCAGTCAGGATGCTGGCG...GACACATCCTGCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCATCTCTTGGACCTAGGGTTCGTTTTAAGCCGGTGTTCCTTCAGCAAATGGGCACGCCAGCATCCTaGCTGCATTCTCCTTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: PSSLGPRVRFKPVFLQQMGTPAS*LHSPWG Trigger: GCCCCAAGGAGAATGCAGTCAGGATGCTGGCGTGCC...CATTTGCTGAAGGAACACCGGCTTAAAACGAACCCTAGGTCCAAGAGATGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGACAAGAACACTCCACCTTTATTTTGGGAAGAGCCTTCATCTCTTGGACATGTTACTCAACCCTTaGTGGGTCCCGGAGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: KGTRTLHLYFGKSLHLLDMLLNP*WVPERS Trigger: AGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACAT...GTCCAAGAGATGAAGGCTCTTCCCAAAATAAAGGTGGAGTGTTCTTGTCCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR CAA 90 bp | GGGACAAGAACACTCCACCTTTATTTTGGGAAGAGCCTTCATCTCTaGGACCTAGGGTTCGTTTTAAGCCGGTGTTCCTTCAGCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: GTRTLHLYFGKSLHL*DLGFVLSRCSFSKC Trigger: ACATTTGCTGAAGGAACACCGGCTTAAAACGAACCCTAGGTCCAAGAGATGAAGGCTCTTCCCAAAATAAAGGTGGAGTGTTCTTGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCCTTCATCTCTTGGACCTAGGGTTCGTTTTAAGCCGGTGTTCCTTCAGCAATACAAAAGCTACTTCTaGAGAGAGGGGAGAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: EPSSLGPRVRFKPVFLQQYKSYF*REGRRR Trigger: TCTTCTTCTCCCCTCTCTTCAGAAGTAGCTTTTGTA...TTGCTGAAGGAACACCGGCTTAAAACGAACCCTAGGTCCAAGAGATGAAGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR-3UTR CAA 90 bp | TACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCCACTGGCAGGATGTGTCCCTGACTGCATTCTCCTaGGGGCCCCGTCCACAATGC | + |
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Preference number: 3 (lower is better) Translates to: YSTLAGSRRGLAHWQDVSLTAFS*GPRPQC Trigger: GCATTGTGGACGGGGCCCCAAGGAGAATGCAGTCAG...GGACACATCCTGCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR GCA 72 bp | AAGAAAGGGCTCCTCTCTCCACTAGGCACCCAGCGCTaGACAGTTGGACCTGATGAGCCAAGTCCCGTCGAA | + |
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Preference number: 3 (lower is better) Translates to: KKGLLSPLGTQR*TVGPDEPSPVE Trigger: TTCGACGGGACTTGGCTCATCAGGTCCAACTGTGCAGCGCTGGGTGCCTAGTGGAGAGAGGAGCCCTTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR GCA 72 bp | CTGGGAAATAGTGTAATGGCACGCCAGCATCCTGACTaGATTCTCCTTGGGGCCCCGTCCACAATGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LGNSVMARQHPD*ILLGAPSTMLW Trigger: CCAGAGCATTGTGGACGGGGCCCCAAGGAGAATGCAGTCAGGATGCTGGCGTGCCATTACACTATTTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR GCA 72 bp | AAGCCGGTGTTCCTTCAGCAAATGTTACTCAACCCTTaGTGGGTCCCGGAGAGGTCTTGCCCACTGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: KPVFLQQMLLNP*WVPERSCPLAG Trigger: TCCTGCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACATTTGCTGAAGGAACACCGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR CCA 72 bp | CCGGTGTTCCTTCAGCAAATGTTACTCAACCCTTGCTaGGTCCCGGAGAGGTCTTGCCCACTGGCAGGATGT | + |
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Preference number: 3 (lower is better) Translates to: PVFLQQMLLNPC*VPERSCPLAGC Trigger: ACATCCTGCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACATTTGCTGAAGGAACACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGCAGGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTCCACCCTCAGCCCCCTaGAAACTAACAGCAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: LAGCVLKFRNQERAPLSTPPSAP*KLTAEE Trigger: CTCCTCTGCTGTTAGTTTCAAGGGGGCTGAGGGTGG...AGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCCTGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | GATGAGCCAAGTCCCGTCGAACCCCCACCCTCAGCCCCCTTGAAACTAACAGCAGGTTGCGGAAGAGCGTaGGGGGCAGGGCCCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: DEPSPVEPPPSAPLKLTAGCGRA*GAGPAA Trigger: GGCTGCGGGCCCTGCCCCGCACGCTCTTCCGCAACC...TGCTGTTAGTTTCAAGGGGGCTGAGGGTGGGGGTTCGACGGGACTTGGCTCATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | TACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCCACTGGCAGGATGTGTCCGCAAGCCGCTCAGGTTaGGGAAGGCAGCGGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: YSTLAGSRRGLAHWQDVSASRSG*GRQRRA Trigger: TGCCCGCCGCTGCCTTCCGCAACCTGAGCGGCTTGC...GGACACATCCTGCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR TCA 90 bp | TTACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCCACTGGCAGGATGTGTCCGCTCTCGAGGCTGCTaGGGTTGCGGAAGAGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: LLNPCWVPERSCPLAGCVRSRGC*GCGRAC Trigger: GCACGCTCTTCCGCAACCTCAGCAGCCTCGAGAGCG...GACACATCCTGCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | TCAGCAAATGTTACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCCACTGGCCAGCGGCGGGCAGCGTaGTCAGGTGGGTGCCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SANVTQPLLGPGEVLPTGQRRAA*SGGCRS Trigger: TGAACGGCACCCACCTGAGCACGCTGCCCGCCGCTG...GCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACATTTGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR CAA 72 bp | GAGCCAAGTCCCGTCGAACCCCCACCCTCAGCCCCCTaGAAACTAACAGCAGAGGAGGTAACCCAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EPSPVEPPPSAP*KLTAEEVTQAR Trigger: CCTGGCCTGGGTTACCTCCTCTGCTGTTAGTTTCAAGGGGGCTGAGGGTGGGGGTTCGACGGGACTTGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | CTAAGAGCACGGGAGAGGAGAAAAGGCCTGGGAAATAGTGTAATGGCACGCCAGCCCCTGGCCACCAGCTaGGCCCACGTCTGGGACTGC | + |
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Preference number: 4 (lower is better) Translates to: LRARERRKGLGNSVMARQPLATS*AHVWDC Trigger: GCAGTCCCAGACGTGGGCCCAGCTGGTGGCCAGGGG...CTGGCGTGCCATTACACTATTTCCCAGGCCTTTTCTCCTCTCCCGTGCTCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR TCA 90 bp | GGTGTTCCTTCAGCAAATGTTACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCTAGCTCAGCGATGTaGGCCACGCTGCCGCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: GVPSANVTQPLLGPGEVLPSSAM*ATLPPE Trigger: CTCGGGCGGCAGCGTGGCTCACATCGCTGAGCTAGG...CAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACATTTGCTGAAGGAACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | CCACTGGCAGGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCGCCAGGGCGTTGGTGTaGAGCGCGAGCACGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PLAGCVLKFRNQERAPLSARALV*SASTRS Trigger: GCTGCGCGTGCTCGCGCTGCACACCAACGCCCTGGC...GGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCCTGCCAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR TCA 90 bp | TCAGCAAATGTTACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCCACTGGCGAGAGCATCAGGCGCTaGAGGACTGTCATGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: SANVTQPLLGPGEVLPTGESIRR*RTVMPL Trigger: CAGCGGCATGACAGTCCTTCAGCGCCTGATGCTCTC...GCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACATTTGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR TCA 90 bp | TCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAGGCACCCAGCGCCAGAGCCAGGGGTTGTaGCCCAGCAGGACCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSNSETKKGLLSPLGTQRQSQGL*PSRTWV Trigger: GACCCAGGTCCTGCTGGGTCACAACCCCTGGCTCTG...GCGCTGGGTGCCTAGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | TCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAGGCACCCAGCGCGTCAGCCCCAGCGTCTaGAAGCCGCTCAGGTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: SSNSETKKGLLSPLGTQRVSPSV*KPLRLR Trigger: CCGCAACCTGAGCGGCTTGCAGACGCTGGGGCTGAC...GCGCTGGGTGCCTAGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | GCACGGGAGAGGAGAAAAGGCCTGGGAAATAGTGTAATGGCACGCCAGCATCCTGCCCACGTCTGGGACTaGCAGCTGTTAGGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ARERRKGLGNSVMARQHPAHVWD*QLLGSQ Trigger: CTGGCTGCCTAACAGCTGGCAGTCCCAGACGTGGGC...AGGATGCTGGCGTGCCATTACACTATTTCCCAGGCCTTTTCTCCTCTCCCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | CAAATGTTACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCCACTGGCAGGACGCGGACCACACACTTaGAGGTTTTGGGGCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: QMLLNPCWVPERSCPLAGRGPHT*RFWGRE Trigger: TTCCCTGCCCCAAAACCTGCAAGTGTGTGGTCCGCG...TCCTGCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | CCCTCAGCCCCCTTGAAACTAACAGCAGAGGAGGTAACCCAGGCCAGGCTAGAATGGTTGTGCTCTAGCTaGACGCTCTCGAGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSAPLKLTAEEVTQARLEWLCSS*TLSRLL Trigger: CAGCAGCCTCGAGAGCGTGCAGCTAGAGCACAACCA...TTCTAGCCTGGCCTGGGTTACCTCCTCTGCTGTTAGTTTCAAGGGGGCTGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | CTGGCAGGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTGGTCGAGAGGCAGGCTaGGAGGATCCGGGCACCACG | + |
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Preference number: 4 (lower is better) Translates to: LAGCVLKFRNQERAPLSTGREAG*EDPGTT Trigger: CGTGGTGCCCGGATCCTCGCAGCCTGCCTCTCGACC...AGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCCTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | GACCTAGGGTTCGTTTTAAGCCGGTGTTCCTTCAGCAAATGTTACTCAACCCTTGCCCGCAGCCGGTTGTaGCGCAGCGACACCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: DLGFVLSRCSFSKCYSTLARSRL*RSDTWR Trigger: GCGCCAGGTGTCGCTGCGCCACAACCGGCTGCGGGC...AAGGGTTGAGTAACATTTGCTGAAGGAACACCGGCTTAAAACGAACCCTAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAGCCTTCATCTCTTGGACCTAGGGTTCGTTTTAAGCCGGTGTTCCTTTGGGACTTTCACCCCTaGCCACCAGCTGGGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: WEEPSSLGPRVRFKPVFLWDFHP*PPAGPT Trigger: CGTGGGCCCAGCTGGTGGCCAGGGGTGAAAGTCCCA...AAGGAACACCGGCTTAAAACGAACCCTAGGTCCAAGAGATGAAGGCTCTTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | TTGAAACTAACAGCAGAGGAGGTAACCCAGGCCAGGCTAGAAAGCAGTAGCGATTCAGGGCGCCCAGGTTaGTCAGCAGCCCCGAATCCA | + |
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Preference number: 4 (lower is better) Translates to: LKLTAEEVTQARLESSSDSGRPG*SAAPNP Trigger: TGGATTCGGGGCTGCTGAGCAACCTGGGCGCCCTGA...ATCGCTACTGCTTTCTAGCCTGGCCTGGGTTACCTCCTCTGCTGTTAGTTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | GGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAGGCACCACCACGGGTCACCCTaGAGCAGCTCCCAGAACGAC | + |
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Preference number: 4 (lower is better) Translates to: GCVLKFRNQERAPLSTRHHHGSP*SSSQND Trigger: GTCGTTCTGGGAGCTGCTGCAGGGTGACCCGTGGTG...GTGCCTAGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | CCACTGGCAGGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCCCCCAAGCAGTCCCTTaGGCAGGTGGGTCAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: PLAGCVLKFRNQERAPLSPQAVP*AGGSGC Trigger: ACAACCTGACCCACCTGCCCAAGGGACTGCTTGGGG...GGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCCTGCCAGTGG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | GGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAGGCACAGCTGGGCCCACGTCTaGGACTGCCAGCTGTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: GCVLKFRNQERAPLSTRHSWAHV*DCQLLG Trigger: GCCTAACAGCTGGCAGTCCCAGACGTGGGCCCAGCT...GTGCCTAGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | CATCTCTTGGACCTAGGGTTCGTTTTAAGCCGGTGTTCCTTCAGCAAATGTTACGGCAGCGTGCTCAGGTaGGTGCCGTTCAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: HLLDLGFVLSRCSFSKCYGSVLR*VPFSHS Trigger: GCTGTGGCTGAACGGCACCCACCTGAGCACGCTGCC...GTAACATTTGCTGAAGGAACACCGGCTTAAAACGAACCCTAGGTCCAAGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR TCA 90 bp | CCCTCAGCCCCCTTGAAACTAACAGCAGAGGAGGTAACCCAGGCCAGGCTAGAAAGACGTGAGCTGGTTTaGATAGAGCAGCAGTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PSAPLKLTAEEVTQARLERRELV*IEQQFL Trigger: GAGAAACTGCTGCTCTATTCAAACCAGCTCACGTCT...TTCTAGCCTGGCCTGGGTTACCTCCTCTGCTGTTAGTTTCAAGGGGGCTGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | CTGGCAGGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTTCAGCCGAGACACGCTaGTCACGTGAAGGAAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: LAGCVLKFRNQERAPLSTSAETR*SREGRA Trigger: CGCTCTTCCTTCACGTGAGCAGCGTGTCTCGGCTGA...AGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCCTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | AAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAGGCACCCAGCGCTGCACCACACTTGCAGGTTTTaGGGCAGGGAAAAGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: KFRNQERAPLSTRHPALHHTCRF*GREKVG Trigger: CCCAACCTTTTCCCTGCCCCAAAACCTGCAAGTGTG...GTGCAGCGCTGGGTGCCTAGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | GATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAGGCACCAGGTGCCGGGGTCGATaGCGGAAATGTGGCTATCTG | + |
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Preference number: 4 (lower is better) Translates to: DVSSNSETKKGLLSPLGTRCRGR*RKCGYL Trigger: CAGATAGCCACATTTCCGCCATCGACCCCGGCACCT...GGTGCCTAGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR TCA 90 bp | GATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAGGCACCGTTTTACCAGGTCATTaGAGGTGCCGGGGTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: DVSSNSETKKGLLSPLGTVLPGH*RCRGRW Trigger: CCATCGACCCCGGCACCTTCAATGACCTGGTAAAAC...GGTGCCTAGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR GCA 90 bp | GAGGAGGTAACCCAGGCCAGGCTAGAAAGCAGTAGCGATTTACAAAAGCTACTTGTCTCCAGCTGGTTGTaGTCTAGCTGCACGCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: EEVTQARLESSSDLQKLLVSSWL*SSCTLS Trigger: CGAGAGCGTGCAGCTAGAGCACAACCAGCTGGAGAC...AAGTAGCTTTTGTAAATCGCTACTGCTTTCTAGCCTGGCCTGGGTTACCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | CCGGTGTTCCTTCAGCAAATGTTACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTCCCTTAGTGCATTGTaGTCCAAGAACAGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PVFLQQMLLNPCWVPERSSLSAL*SKNSCS Trigger: GGAACAGCTGTTCTTGGACCACAATGCACTAAGGGA...AGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACATTTGCTGAAGGAACACCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | AAAGGGACAAGAACACTCCACCTTTATTTTGGGAAGAGCCTTCATCTCTTGGACAGTCCCTTGGGCAGGTaGGTCAGGTTGTTTCGCGAT | + |
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Preference number: 4 (lower is better) Translates to: KGTRTLHLYFGKSLHLLDSPLGR*VRLFRD Trigger: ATCGCGAAACAACCTGACCCACCTGCCCAAGGGACT...GTCCAAGAGATGAAGGCTCTTCCCAAAATAAAGGTGGAGTGTTCTTGTCCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR TCA 90 bp | TGGCAGGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAGGAAGAAAAGAGAGCTaGTTCTGGTTCAAACCGAGC | + |
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Preference number: 4 (lower is better) Translates to: WQDVSSNSETKKGLLSPLGRKES*FWFKPS Trigger: GCTCGGTTTGAACCAGAATCAGCTCTCTTTTCTTCC...TAGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCCTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CCA 90 bp | CTAAGAGCACGGGAGAGGAGAAAAGGCCTGGGAAATAGTGTAATGGCACGCCAGAATGTTCGAAACAGCTaGCCGATTTTAATCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: LRARERRKGLGNSVMARQNVRNS*PILIMA Trigger: TGCCATGATTAAAATCGGCCAGCTGTTTCGAACATT...CTGGCGTGCCATTACACTATTTCCCAGGCCTTTTCTCCTCTCCCGTGCTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| 3UTR CAA 72 bp | ACACTCCACCTTTATTTTGGGAAGAGCCTTCATCTCTaGGACCTAGGGTTCGTTTTAAGCCGGTGTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLHLYFGKSLHL*DLGFVLSRCSF Trigger: GAAGGAACACCGGCTTAAAACGAACCCTAGGTCCAAGAGATGAAGGCTCTTCCCAAAATAAAGGTGGAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 90 bp | GGCAGGGCCCGCAGCCGGTTGTGGCGCAGCGACACCTGGCGCAGGTaGCCGAGGCCGCGCAGCGCGTCGTCCCGCAGCTCCGCCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GRARSRLWRSDTWRR*PRPRSASSRSSARA Trigger: CGCCCTGGCGGAGCTGCGGGACGACGCGCTGCGCGGCCTCGGGCACCTGCGCCAGGTGTCGCTGCGCCACAACCGGCTGCGGGCCCTGCC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 90 bp | AGCGTGCGGGGCAGGGCCCGCAGCCGGTTGTGGCGCAGCGACACCTaGCGCAGGTGCCCGAGGCCGCGCAGCGCGTCGTCCCGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVRGRARSRLWRSDT*RRCPRPRSASSRSS Trigger: GGAGCTGCGGGACGACGCGCTGCGCGGCCTCGGGCACCTGCGCCAGGTGTCGCTGCGCCACAACCGGCTGCGGGCCCTGCCCCGCACGCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 90 bp | CTGAGGTTGCGGAAGAGCGTGCGGGGCAGGGCCCGCAGCCGGTTGTaGCGCAGCGACACCTGGCGCAGGTGCCCGAGGCCGCGCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRLRKSVRGRARSRL*RSDTWRRCPRPRSA Trigger: CGCGCTGCGCGGCCTCGGGCACCTGCGCCAGGTGTCGCTGCGCCACAACCGGCTGCGGGCCCTGCCCCGCACGCTCTTCCGCAACCTCAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 90 bp | CGCGGGAGCGCGCTCAGGCGCGGGTTCCGCGTCAGCCCCAGCGTCTaGAAGCCGCTCAGGTTGCGGAAGGCAGCGGCGGGCAGCGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGSALRRGFRVSPSV*KPLRLRKAAAGSVL Trigger: GAGCACGCTGCCCGCCGCTGCCTTCCGCAACCTGAGCGGCTTGCAGACGCTGGGGCTGACGCGGAACCCGCGCCTGAGCGCGCTCCCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 90 bp | AGGCCGCGCAGCGCGTCGTCCCGCAGCTCCGCCAGGGCGTTGGTGTaGAGCGCGAGCACGCGCAGCTCCCGTAGGCCCTGGAACACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPRSASSRSSARALV*SASTRSSRRPWNTP Trigger: CGGCGTGTTCCAGGGCCTACGGGAGCTGCGCGTGCTCGCGCTGCACACCAACGCCCTGGCGGAGCTGCGGGACGACGCGCTGCGCGGCCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 90 bp | AGGGCGTTGGTGTGCAGCGCGAGCACGCGCAGCTCCCGTAGGCCCTaGAACACGCCGCGCGGGAGCGCGCTCAGGCGCGGGTTCCGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RALVCSASTRSSRRP*NTPRGSALRRGFRV Trigger: GACGCGGAACCCGCGCCTGAGCGCGCTCCCGCGCGGCGTGTTCCAGGGCCTACGGGAGCTGCGCGTGCTCGCGCTGCACACCAACGCCCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 90 bp | GCCCGAGGCCGCGCAGCGCGTCGTCCCGCAGCTCCGCCAGGGCGTTaGTGTGCAGCGCGAGCACGCGCAGCTCCCGTAGGCCCTGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: ARGRAARRPAAPPGR*CAARARAAPVGPGT Trigger: TGTTCCAGGGCCTACGGGAGCTGCGCGTGCTCGCGCTGCACACCAACGCCCTGGCGGAGCTGCGGGACGACGCGCTGCGCGGCCTCGGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 90 bp | CCGGGCACCACGGGTCACCCTGCAGCAGCTCCCAGAACGACAGGCTaGCGCGTGGCTCCGGGCCACGGCACTGCGGGGGCTCGTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGTTGHPAAAPRTTG*RVAPGHGTAGARLG Trigger: GCCGAGACGAGCCCCCGCAGTGCCGTGGCCCGGAGCCACGCGCCAGCCTGTCGTTCTGGGAGCTGCTGCAGGGTGACCCGTGGTGCCCGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 90 bp | CCACGGGTCACCCTGCAGCAGCTCCCAGAACGACAGGCTGGCGCGTaGCTCCGGGCCACGGCACTGCGGGGGCTCGTCTCGGCCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PRVTLQQLPERQAGA*LRATALRGLVSAQD Trigger: ATCCTGGGCCGAGACGAGCCCCCGCAGTGCCGTGGCCCGGAGCCACGCGCCAGCCTGTCGTTCTGGGAGCTGCTGCAGGGTGACCCGTGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS TCA 90 bp | AGGTTTCCGAGGCGGTCGAAGGCACCCGGGGCTACGGAGCGGAGGTaGTTCCGCTCCAGCCGCAGCTCAGTCAGGGCGCCCAGGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RFPRRSKAPGATERR*FRSSRSSVRAPRLL Trigger: GAGCAACCTGGGCGCCCTGACTGAGCTGCGGCTGGAGCGGAATCACCTCCGCTCCGTAGCCCCGGGTGCCTTCGACCGCCTCGGAAACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS TCA 90 bp | GCGTCTCCAGCTGGTTGTGCTCTAGCTGCACGCTCTCGAGGCTGCTaGGGTTGCGGAAGAGCGTGCGGGGCAGGGCCCGCAGCCGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASPAGCALAARSRGC*GCGRACGAGPAAGC Trigger: ACAACCGGCTGCGGGCCCTGCCCCGCACGCTCTTCCGCAACCTCAGCAGCCTCGAGAGCGTGCAGCTAGAGCACAACCAGCTGGAGACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 90 bp | CCGGGGCTTCCAGAGCATTTTCGGTTGGAGGGTCGAGAGGCAGGCTaGGAGGATCCGGGCACCACGGGTCACCCTGCAGCAGCTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGLPEHFRLEGREAG*EDPGTTGHPAAAPR Trigger: TCTGGGAGCTGCTGCAGGGTGACCCGTGGTGCCCGGATCCTCGCAGCCTGCCTCTCGACCCTCCAACCGAAAATGCTCTGGAAGCCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 90 bp | TTGGGACTTTCACCCCTGGCCACCAGCTGGGCCCACGTCTGGGACTaGCAGCTGTTAGGCAGCCAGGACGGAACCGGGGCTTCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGLSPLATSWAHVWD*QLLGSQDGTGASRA Trigger: TGCTCTGGAAGCCCCGGTTCCGTCCTGGCTGCCTAACAGCTGGCAGTCCCAGACGTGGGCCCAGCTGGTGGCCAGGGGTGAAAGTCCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 90 bp | AGCTGGGGCAGAGCCGCGAACACGTCTCCTGGCAGCGTCTCCAGCTaGTTGTGCTCTAGCTGCACGCTCTCGAGGCTGCTGAGGTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SWGRAANTSPGSVSS*LCSSCTLSRLLRLR Trigger: CCGCAACCTCAGCAGCCTCGAGAGCGTGCAGCTAGAGCACAACCAGCTGGAGACGCTGCCAGGAGACGTGTTCGCGGCTCTGCCCCAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS TCA 90 bp | AGCAGGATGTGTGTGAGGTTCGTAGGCAGACCTAGCTCAGCGATGTaGGCCACGCTGCCGCCCGAGCACTGCGCGGCATCGCGGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: SRMCVRFVGRPSSAM*ATLPPEHCAASRTT Trigger: TGTGGTCCGCGATGCCGCGCAGTGCTCGGGCGGCAGCGTGGCTCACATCGCTGAGCTAGGTCTGCCTACGAACCTCACACACATCCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 90 bp | GGAGCTCCTCCAGGGGGTTCTCGAACAGAGTCAGCCGAGACACGCTaGTCACGTGAAGGAAGAGCGCGGGCGGCAGAGACTCCAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GAPPGGSRTESAETR*SREGRARAAETPGG Trigger: ACCTCCTGGAGTCTCTGCCGCCCGCGCTCTTCCTTCACGTGAGCAGCGTGTCTCGGCTGACTCTGTTCGAGAACCCCCTGGAGGAGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 90 bp | GGCAGAGCCGCGAACACGTCTCCTGGCAGCGTCTCCAGCTGGTTGTaGTCTAGCTGCACGCTCTCGAGGCTGCTGAGGTTGCGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRAANTSPGSVSSWL*SSCTLSRLLRLRKS Trigger: GCTCTTCCGCAACCTCAGCAGCCTCGAGAGCGTGCAGCTAGAGCACAACCAGCTGGAGACGCTGCCAGGAGACGTGTTCGCGGCTCTGCC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 90 bp | CTGTTATTGGGACTTTCACCCCTGGCCACCAGCTGGGCCCACGTCTaGGACTGCCAGCTGTTAGGCAGCCAGGACGGAACCGGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLGLSPLATSWAHV*DCQLLGSQDGTGAS Trigger: GGAAGCCCCGGTTCCGTCCTGGCTGCCTAACAGCTGGCAGTCCCAGACGTGGGCCCAGCTGGTGGCCAGGGGTGAAAGTCCCAATAACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS TCA 90 bp | TCCAGGGGGTTCTCGAACAGAGTCAGCCGAGACACGCTGCTCACGTaGAGGAAGAGCGCGGGCGGCAGAGACTCCAGGAGGTTTCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRGFSNRVSRDTLLT*RKSAGGRDSRRFPD Trigger: ATCCGGAAACCTCCTGGAGTCTCTGCCGCCCGCGCTCTTCCTTCACGTGAGCAGCGTGTCTCGGCTGACTCTGTTCGAGAACCCCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCAGGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAGGGCCCGCAGCCGGTaGTGGCGCAGCGACACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAGCVLKFRNQERAPLSTRARSR*WRSDTW Trigger: CCAGGTGTCGCTGCGCCACAACCGGCTGCGGGCCCT...AGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCCTGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS TCA 90 bp | CAGGTCATTGAAGGTGCCGGGGTCGATGGCGGAAATGTGGCTATCTaGGAGCATCAGGCGCTGAAGGACTGTCATGCCGCTGAAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVIEGAGVDGGNVAI*EHQALKDCHAAEAV Trigger: CACAGCTTCAGCGGCATGACAGTCCTTCAGCGCCTGATGCTCTCAGATAGCCACATTTCCGCCATCGACCCCGGCACCTTCAATGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS-3UTR CAA 90 bp | CTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCCACTGGCAGGATGTGTCCTCTTTCTCAAGCTTAACTaGAGCCCCAAGCAGTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LNPCWVPERSCPLAGCVLFLKLN*SPKQSL Trigger: AAGGGACTGCTTGGGGCTCAAGTTAAGCTTGAGAAA...GAGGACACATCCTGCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGGTAACCCAGGCCAGGCTAGAAAGCAGTAGCGATTTACAAAAGCTACTTTCGAGGCTGCTGAGGTaGCGGAAGAGCGTGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EEVTQARLESSSDLQKLLSRLLR*RKSVRG Trigger: GCCCCGCACGCTCTTCCGCAACCTCAGCAGCCTCGA...AAGTAGCTTTTGTAAATCGCTACTGCTTTCTAGCCTGGCCTGGGTTACCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS TCA 90 bp | TGTGGCTATCTGAGAGCATCAGGCGCTGAAGGACTGTCATGCCGCTaGAGCTGTGGTTCCGCAATATGCCCTGGTCCATTCGGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGYLRASGAEGLSCR*SCGSAICPGPFGRA Trigger: TGCTCTTCCGAATGGACCAGGGCATATTGCGGAACCACAGCTTCAGCGGCATGACAGTCCTTCAGCGCCTGATGCTCTCAGATAGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 90 bp | GGGCTACTAGAAGCAGAATATAAAGACCCCAGTAGAGCCTGTTATTaGGACTTTCACCCCTGGCCACCAGCTGGGCCCACGTCTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GLLEAEYKDPSRACY*DFHPWPPAGPTSGT Trigger: AGTCCCAGACGTGGGCCCAGCTGGTGGCCAGGGGTGAAAGTCCCAATAACAGGCTCTACTGGGGTCTTTATATTCTGCTTCTAGTAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCAAATGTTACTCAACCCTTGCTGGGTCCCGGAGAGGTCTTGCCCACTGGCAGTTTTACCAGGTCATaGAAGGTGCCGGGGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SANVTQPLLGPGEVLPTGSFTRS*KVPGSM Trigger: CATCGACCCCGGCACCTTCAATGACCTGGTAAAACT...GCCAGTGGGCAAGACCTCTCCGGGACCCAGCAAGGGTTGAGTAACATTTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS TCA 90 bp | GCCCAGGTTGCTCAGCAGCCCCGAATCCACAGACGTGAGCTGGTTTaGATAGAGCAGCAGTTTCTCAAGCTTAACTTGAGCCCCAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AQVAQQPRIHRRELV*IEQQFLKLNLSPKQ Trigger: CTGCTTGGGGCTCAAGTTAAGCTTGAGAAACTGCTGCTCTATTCAAACCAGCTCACGTCTGTGGATTCGGGGCTGCTGAGCAACCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CAA 90 bp | CCCTCAGCCCCCTTGAAACTAACAGCAGAGGAGGTAACCCAGGCCAGGCTAGAAAGGTCCCTTAGTGCATaGTGGTCCAAGAACAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSAPLKLTAEEVTQARLERSLSA*WSKNSC Trigger: ACAGCTGTTCTTGGACCACAATGCACTAAGGGACCT...TTCTAGCCTGGCCTGGGTTACCTCCTCTGCTGTTAGTTTCAAGGGGGCTGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CAA 90 bp | ACTCCACCTTTATTTTGGGAAGAGCCTTCATCTCTTGGACCTAGGGTTCGTTTTGTCAGGGCGCCCAGGTaGCTCAGCAGCCCCGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: TPPLFWEEPSSLGPRVRFVRAPR*LSSPES Trigger: GGATTCGGGGCTGCTGAGCAACCTGGGCGCCCTGAC...AAAACGAACCCTAGGTCCAAGAGATGAAGGCTCTTCCCAAAATAAAGGTGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS-3UTR CAA 90 bp | CGTTTTAAGCCGGTGTTCCTTCAGCAAATGTTACTCAACCCTTGCTGGGTCCCGGGCAGGTGGGTCAGGTaGTTTCGCGATAAATCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RFKPVFLQQMLLNPCWVPGRWVR*FRDKSN Trigger: GTTGGATTTATCGCGAAACAACCTGACCCACCTGCC...CGGGACCCAGCAAGGGTTGAGTAACATTTGCTGAAGGAACACCGGCTTAAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CAA 90 bp | GACCTAGGGTTCGTTTTAAGCCGGTGTTCCTTCAGCAAATGTTACTCAACCCTTAGCGTCTCCAGCTGGTaGTGCTCTAGCTGCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DLGFVLSRCSFSKCYSTLSVSSW*CSSCTL Trigger: GAGCGTGCAGCTAGAGCACAACCAGCTGGAGACGCT...AAGGGTTGAGTAACATTTGCTGAAGGAACACCGGCTTAAAACGAACCCTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS-3UTR CAA 90 bp | TGGCAGGATGTGTCCTCAAATTCAGAAACCAAGAAAGGGCTCCTCTCTCCACTAACACACTTGCAGGTTTaGGGGCAGGGAAAAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WQDVSSNSETKKGLLSPLTHLQV*GQGKGW Trigger: CCAACCTTTTCCCTGCCCCAAAACCTGCAAGTGTGT...TAGTGGAGAGAGGAGCCCTTTCTTGGTTTCTGAATTTGAGGACACATCCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 90 bp | CAAGAACAGCTGTTCCAAGAGTACCATCTTATCCAGGATCGCACGTaGAAGACGAGAGATTTTGTTGCGCGTCAACCTGAGGGTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEQLFQEYHLIQDRT*KTRDFVARQPEGFQ Trigger: CTGAAAACCCTCAGGTTGACGCGCAACAAAATCTCTCGTCTTCCACGTGCGATCCTGGATAAGATGGTACTCTTGGAACAGCTGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 90 bp | ATTGCCTCTAACAAGAGCTTCTCTCTGATTAATGTTCGAAACAGCTaGCCGATTTTAATCATGGCAAACACGATGAACGCGGCTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: IASNKSFSLINVRNS*PILIMANTMNAAMM Trigger: CATCATAGCCGCGTTCATCGTGTTTGCCATGATTAAAATCGGCCAGCTGTTTCGAACATTAATCAGAGAGAAGCTCTTGTTAGAGGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 72 bp | GTGTGCAGCGCGAGCACGCGCAGCTCCCGTAGGCCCTaGAACACGCCGCGCGGGAGCGCGCTCAGGCGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VCSASTRSSRRP*NTPRGSALRRG Trigger: CCCGCGCCTGAGCGCGCTCCCGCGCGGCGTGTTCCAGGGCCTACGGGAGCTGCGCGTGCTCGCGCTGCACAC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CAA 90 bp | TGCCCGAGGCCGCGCAGCGCGTCGTCCCGCAGCTCCGCCAGGGCGTaGGTGTGCAGCGCGAGCACGCGCAGCTCCCGTAGGCCCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CPRPRSASSRSSARA*VCSASTRSSRRPWN Trigger: GTTCCAGGGCCTACGGGAGCTGCGCGTGCTCGCGCTGCACACCAACGCCCTGGCGGAGCTGCGGGACGACGCGCTGCGCGGCCTCGGGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 72 bp | CGCGCAGCGCGTCGTCCCGCAGCTCCGCCAGGGCGTTaGTGTGCAGCGCGAGCACGCGCAGCTCCCGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RAARRPAAPPGR*CAARARAAPVG Trigger: GCCTACGGGAGCTGCGCGTGCTCGCGCTGCACACCAACGCCCTGGCGGAGCTGCGGGACGACGCGCTGCGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CAA 72 bp | CCGCGCAGCGCGTCGTCCCGCAGCTCCGCCAGGGCGTaGGTGTGCAGCGCGAGCACGCGCAGCTCCCGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRSASSRSSARA*VCSASTRSSRR Trigger: CCTACGGGAGCTGCGCGTGCTCGCGCTGCACACCAACGCCCTGGCGGAGCTGCGGGACGACGCGCTGCGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 72 bp | GCGCTCAGGCGCGGGTTCCGCGTCAGCCCCAGCGTCTaGAAGCCGCTCAGGTTGCGGAAGGCAGCGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALRRGFRVSPSV*KPLRLRKAAAG Trigger: GCCCGCCGCTGCCTTCCGCAACCTGAGCGGCTTGCAGACGCTGGGGCTGACGCGGAACCCGCGCCTGAGCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 72 bp | AGCGCGTCGTCCCGCAGCTCCGCCAGGGCGTTGGTGTaGAGCGCGAGCACGCGCAGCTCCCGTAGGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SASSRSSARALV*SASTRSSRRPW Trigger: CCAGGGCCTACGGGAGCTGCGCGTGCTCGCGCTGCACACCAACGCCCTGGCGGAGCTGCGGGACGACGCGCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CAA 72 bp | TTGCGGAAGAGCGTGCGGGGCAGGGCCCGCAGCCGGTaGTGGCGCAGCGACACCTGGCGCAGGTGCCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LRKSVRGRARSR*WRSDTWRRCPR Trigger: CCTCGGGCACCTGCGCCAGGTGTCGCTGCGCCACAACCGGCTGCGGGCCCTGCCCCGCACGCTCTTCCGCAA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 72 bp | ACCCTGCAGCAGCTCCCAGAACGACAGGCTGGCGCGTaGCTCCGGGCCACGGCACTGCGGGGGCTCGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TLQQLPERQAGA*LRATALRGLVS Trigger: CGAGACGAGCCCCCGCAGTGCCGTGGCCCGGAGCCACGCGCCAGCCTGTCGTTCTGGGAGCTGCTGCAGGGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CCA 72 bp | ACGGGTCACCCTGCAGCAGCTCCCAGAACGACAGGCTaGCGCGTGGCTCCGGGCCACGGCACTGCGGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGHPAAAPRTTG*RVAPGHGTAGA Trigger: AGCCCCCGCAGTGCCGTGGCCCGGAGCCACGCGCCAGCCTGTCGTTCTGGGAGCTGCTGCAGGGTGACCCGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS TCA 72 bp | AGGCGGTCGAAGGCACCCGGGGCTACGGAGCGGAGGTaGTTCCGCTCCAGCCGCAGCTCAGTCAGGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRSKAPGATERR*FRSSRSSVRAP Trigger: GGGCGCCCTGACTGAGCTGCGGCTGGAGCGGAATCACCTCCGCTCCGTAGCCCCGGGTGCCTTCGACCGCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 72 bp | TCCGCGTCAGCCCCAGCGTCTGCAAGCCGCTCAGGTTaGGGAAGGCAGCGGCGGGCAGCGTGCTCAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SASAPASASRSG*GRQRRAACSGG Trigger: CCCACCTGAGCACGCTGCCCGCCGCTGCCTTCCGCAACCTGAGCGGCTTGCAGACGCTGGGGCTGACGCGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS GCA 72 bp | AGCCGCTCAGGTTGCGGAAGGCAGCGGCGGGCAGCGTaGTCAGGTGGGTGCCGTTCAGCCACAGCTCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRSGCGRQRRAA*SGGCRSATAPA Trigger: TGCGGGAGCTGTGGCTGAACGGCACCCACCTGAGCACGCTGCCCGCCGCTGCCTTCCGCAACCTGAGCGGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CAA 72 bp | TTCCGCGTCAGCCCCAGCGTCTGCAAGCCGCTCAGGTaGCGGAAGGCAGCGGCGGGCAGCGTGCTCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FRVSPSVCKPLR*RKAAAGSVLRW Trigger: CCACCTGAGCACGCTGCCCGCCGCTGCCTTCCGCAACCTGAGCGGCTTGCAGACGCTGGGGCTGACGCGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
||
| CDS CAA 90 bp | TCCAGCTGGTTGTGCTCTAGCTGCACGCTCTCGAGGCTGCTGAGGTaGCGGAAGAGCGTGCGGGGCAGGGCCCGCAGCCGGTTGTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SSWLCSSCTLSRLLR*RKSVRGRARSRLWR Trigger: GCGCCACAACCGGCTGCGGGCCCTGCCCCGCACGCTCTTCCGCAACCTCAGCAGCCTCGAGAGCGTGCAGCTAGAGCACAACCAGCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS GCA 72 bp | TCACCCCTGGCCACCAGCTGGGCCCACGTCTGGGACTaGCAGCTGTTAGGCAGCCAGGACGGAACCGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SPLATSWAHVWD*QLLGSQDGTGA Trigger: AGCCCCGGTTCCGTCCTGGCTGCCTAACAGCTGGCAGTCCCAGACGTGGGCCCAGCTGGTGGCCAGGGGTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CAA 72 bp | TTGTGCTCTAGCTGCACGCTCTCGAGGCTGCTGAGGTaGCGGAAGAGCGTGCGGGGCAGGGCCCGCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: LCSSCTLSRLLR*RKSVRGRARSR Trigger: CCGGCTGCGGGCCCTGCCCCGCACGCTCTTCCGCAACCTCAGCAGCCTCGAGAGCGTGCAGCTAGAGCACAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS TCA 72 bp | GCTGGTTGTGCTCTAGCTGCACGCTCTCGAGGCTGCTaGGGTTGCGGAAGAGCGTGCGGGGCAGGGCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: AGCALAARSRGC*GCGRACGAGPA Trigger: TGCGGGCCCTGCCCCGCACGCTCTTCCGCAACCTCAGCAGCCTCGAGAGCGTGCAGCTAGAGCACAACCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CAA 90 bp | CCGCCCGAGCACTGCGCGGCATCGCGGACCACACACTTGCAGGTTTaGGGGCAGGGAAAAGGTTGGGCACGCAAGAGTGCGAGCACCGCG | + |
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Preference number: 6 (lower is better) Translates to: PPEHCAASRTTHLQV*GQGKGWARKSASTA Trigger: CGCGGTGCTCGCACTCTTGCGTGCCCAACCTTTTCCCTGCCCCAAAACCTGCAAGTGTGTGGTCCGCGATGCCGCGCAGTGCTCGGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 72 bp | GGACTTTCACCCCTGGCCACCAGCTGGGCCCACGTCTaGGACTGCCAGCTGTTAGGCAGCCAGGACGGAACC | + |
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Preference number: 6 (lower is better) Translates to: GLSPLATSWAHV*DCQLLGSQDGT Trigger: GGTTCCGTCCTGGCTGCCTAACAGCTGGCAGTCCCAGACGTGGGCCCAGCTGGTGGCCAGGGGTGAAAGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CAA 72 bp | GCCAGGACGGAACCGGGGCTTCCAGAGCATTTTCGGTaGGAGGGTCGAGAGGCAGGCTGCGAGGATCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: ARTEPGLPEHFR*EGREAGCEDPG Trigger: GCCCGGATCCTCGCAGCCTGCCTCTCGACCCTCCAACCGAAAATGCTCTGGAAGCCCCGGTTCCGTCCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS GCA 72 bp | CCAGGGGGTTCTCGAACAGAGTCAGCCGAGACACGCTaGTCACGTGAAGGAAGAGCGCGGGCGGCAGAGACT | + |
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Preference number: 6 (lower is better) Translates to: PGGSRTESAETR*SREGRARAAET Trigger: AGTCTCTGCCGCCCGCGCTCTTCCTTCACGTGAGCAGCGTGTCTCGGCTGACTCTGTTCGAGAACCCCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 72 bp | AGAGCCGCGAACACGTCTCCTGGCAGCGTCTCCAGCTaGTTGTGCTCTAGCTGCACGCTCTCGAGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RAANTSPGSVSS*LCSSCTLSRLL Trigger: CAGCAGCCTCGAGAGCGTGCAGCTAGAGCACAACCAGCTGGAGACGCTGCCAGGAGACGTGTTCGCGGCTCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 72 bp | GACCCCAGTAGAGCCTGTTATTGGGACTTTCACCCCTaGCCACCAGCTGGGCCCACGTCTGGGACTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: DPSRACYWDFHP*PPAGPTSGTAS Trigger: GCTGGCAGTCCCAGACGTGGGCCCAGCTGGTGGCCAGGGGTGAAAGTCCCAATAACAGGCTCTACTGGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 72 bp | AGCCTGTTATTGGGACTTTCACCCCTGGCCACCAGCTaGGCCCACGTCTGGGACTGCCAGCTGTTAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLLLGLSPLATS*AHVWDCQLLGS Trigger: GCTGCCTAACAGCTGGCAGTCCCAGACGTGGGCCCAGCTGGTGGCCAGGGGTGAAAGTCCCAATAACAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CAA 72 bp | CACTGCGCGGCATCGCGGACCACACACTTGCAGGTTTaGGGGCAGGGAAAAGGTTGGGCACGCAAGAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: HCAASRTTHLQV*GQGKGWARKSA Trigger: CGCACTCTTGCGTGCCCAACCTTTTCCCTGCCCCAAAACCTGCAAGTGTGTGGTCCGCGATGCCGCGCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS TCA 72 bp | GAAGGTGCCGGGGTCGATGGCGGAAATGTGGCTATCTaGGAGCATCAGGCGCTGAAGGACTGTCATGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: EGAGVDGGNVAI*EHQALKDCHAA Trigger: AGCGGCATGACAGTCCTTCAGCGCCTGATGCTCTCAGATAGCCACATTTCCGCCATCGACCCCGGCACCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS TCA 72 bp | CTGAGAGCATCAGGCGCTGAAGGACTGTCATGCCGCTaGAGCTGTGGTTCCGCAATATGCCCTGGTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: LRASGAEGLSCR*SCGSAICPGPF Trigger: GAATGGACCAGGGCATATTGCGGAACCACAGCTTCAGCGGCATGACAGTCCTTCAGCGCCTGATGCTCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS TCA 72 bp | CGCCCAGGTTGCTCAGCAGCCCCGAATCCACAGACGTaGGCTGGTTTGAATAGAGCAGCAGTTTCTCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: RPGCSAAPNPQT*AGLNRAAVSQA Trigger: AGCTTGAGAAACTGCTGCTCTATTCAAACCAGCTCACGTCTGTGGATTCGGGGCTGCTGAGCAACCTGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 72 bp | GTCATGCCGCTGAAGCTGTGGTTCCGCAATATGCCCTaGTCCATTCGGAAGAGCAGGATGTGTGTGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VMPLKLWFRNMP*SIRKSRMCVRF Trigger: GAACCTCACACACATCCTGCTCTTCCGAATGGACCAGGGCATATTGCGGAACCACAGCTTCAGCGGCATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 72 bp | GAAGCAGAATATAAAGACCCCAGTAGAGCCTGTTATTaGGACTTTCACCCCTGGCCACCAGCTGGGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: EAEYKDPSRACY*DFHPWPPAGPT Trigger: CGTGGGCCCAGCTGGTGGCCAGGGGTGAAAGTCCCAATAACAGGCTCTACTGGGGTCTTTATATTCTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS TCA 72 bp | GCTCAGCAGCCCCGAATCCACAGACGTGAGCTGGTTTaGATAGAGCAGCAGTTTCTCAAGCTTAACTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: AQQPRIHRRELV*IEQQFLKLNLS Trigger: GCTCAAGTTAAGCTTGAGAAACTGCTGCTCTATTCAAACCAGCTCACGTCTGTGGATTCGGGGCTGCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 72 bp | CTGTTCCAAGAGTACCATCTTATCCAGGATCGCACGTaGAAGACGAGAGATTTTGTTGCGCGTCAACCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LFQEYHLIQDRT*KTRDFVARQPE Trigger: CTCAGGTTGACGCGCAACAAAATCTCTCGTCTTCCACGTGCGATCCTGGATAAGATGGTACTCTTGGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CAA 72 bp | ATCTTATCCAGGATCGCACGTGGAAGACGAGAGATTTaGTTGCGCGTCAACCTGAGGGTTTTCAGTTTTACC | + |
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Preference number: 6 (lower is better) Translates to: ILSRIARGRREI*LRVNLRVFSFT Trigger: GGTAAAACTGAAAACCCTCAGGTTGACGCGCAACAAAATCTCTCGTCTTCCACGTGCGATCCTGGATAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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| CDS CCA 72 bp | AACAAGAGCTTCTCTCTGATTAATGTTCGAAACAGCTaGCCGATTTTAATCATGGCAAACACGATGAACGCG | + |
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Preference number: 6 (lower is better) Translates to: NKSFSLINVRNS*PILIMANTMNA Trigger: CGCGTTCATCGTGTTTGCCATGATTAAAATCGGCCAGCTGTTTCGAACATTAATCAGAGAGAAGCTCTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061190.8 |
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