Pregenerated sensors for GP1BB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050761Ensembl transcript IDs: ENSMUST00000051160.4, ENSMUST00000167388.3
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ACTCTGGTAGTACTGGAATCAGTTTGGCACCATGTTGATTCAGGCTaGCAGAGCTCGGGTCTGGGAGGTTGGGCAAGGGTAGAGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TLVVLESVWHHVDSG*QSSGLGGWARVEAK Trigger: CTTGGCCTCTACCCTTGCCCAACCTCCCAGACCCGAGCTCTGCAAGCCTGAATCAACATGGTGCCAAACTGATTCCAGTACTACCAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| 3UTR-3UTR GCA 90 bp | CAACATTCCCTCAGGCCCTTTCTAGAATTTGGCAAAGTCGGGTGGTACAGAAACATGTTGATTCAGGCTTaGAGAGCTCGGGTCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: QHSLRPFLEFGKVGWYRNMLIQA*RARVWE Trigger: CTCCCAGACCCGAGCTCTGCAAGCCTGAATCAACAT...GTTTCTGTACCACCCGACTTTGCCAAATTCTAGAAAGGGCCTGAGGGAATGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| 3UTR TCA 72 bp | CGACTCCTGCTTGCCCTAGGCCAGTTTGGCAGCGTGTaGAGAAGTGATTATGTCCCTTTTAACAACATTCCC | + |
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Preference number: 3 (lower is better) Translates to: RLLLALGQFGSV*RSDYVPFNNIP Trigger: GGGAATGTTGTTAAAAGGGACATAATCACTTCTTCACACGCTGCCAAACTGGCCTAGGGCAAGCAGGAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| 3UTR CCA 72 bp | CAAGGTTGCTTCACTCTGGTAGTACTGGAATCAGTTTaGCACCATGTTGATTCAGGCTTGCAGAGCTCGGGT | + |
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Preference number: 3 (lower is better) Translates to: QGCFTLVVLESV*HHVDSGLQSSG Trigger: ACCCGAGCTCTGCAAGCCTGAATCAACATGGTGCCAAACTGATTCCAGTACTACCAGAGTGAAGCAACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| 3UTR CCA 72 bp | TCCCTCAGGCCCTTTCTAGAATTTGGCAAAGTCGGGTaGTACAGAAACCGCCAAATGAGGAGAACGGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: SLRPFLEFGKVG*YRNRQMRRTVY Trigger: ATAAACCGTTCTCCTCATTTGGCGGTTTCTGTACCACCCGACTTTGCCAAATTCTAGAAAGGGCCTGAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CCA 90 bp | AGGAGACTGGGCTGTTCCATCACTCTAGGCTCTGAAGACTCAAGGTTGCTTCACCGCAGCGCCAGGGGTTaGCGCCCAGGTGTGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: RRLGCSITLGSEDSRLLHRSARG*RPGVLR Trigger: GCGCAGCACACCTGGGCGCCAACCCCTGGCGCTGCG...GTGAAGCAACCTTGAGTCTTCAGAGCCTAGAGTGATGGAACAGCCCAGTCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR GCA 90 bp | AGGAGACTGGGCTGTTCCATCACTCTAGGCTCTGAAGACTCAAGGTTGCTTCACGTCCACGAGCGTCCCTaGGCAGCTGCATGGCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: RRLGCSITLGSEDSRLLHVHERP*AAAWRG Trigger: CCCGCGCCATGCAGCTGCGCAGGGACGCTCGTGGAC...GTGAAGCAACCTTGAGTCTTCAGAGCCTAGAGTGATGGAACAGCCCAGTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CCA 90 bp | GGCTGTTCCATCACTCTAGGCTCTGAAGACTCAAGGTTGCTTCACTCTGGTAGTCGCAGCGCCAGGGGTTaGCGCCCAGGTGTGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: GCSITLGSEDSRLLHSGSRSARG*RPGVLR Trigger: GCGCAGCACACCTGGGCGCCAACCCCTGGCGCTGCG...ACTACCAGAGTGAAGCAACCTTGAGTCTTCAGAGCCTAGAGTGATGGAACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR GCA 90 bp | AGAAACCGCCAAATGAGGAGAACGGTTTATTCAGTGAGGAGTCTGGCAGGAGACGTCCACGAGCGTCCCTaGGCAGCTGCATGGCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: RNRQMRRTVYSVRSLAGDVHERP*AAAWRG Trigger: CCCGCGCCATGCAGCTGCGCAGGGACGCTCGTGGAC...GTCTCCTGCCAGACTCCTCACTGAATAAACCGTTCTCCTCATTTGGCGGTTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR GCA 90 bp | GGCTGTTCCATCACTCTAGGCTCTGAAGACTCAAGGTTGCTTCACTCTGGTAGTCTCTTGGATGGAGCGTaGGCGCGCACGCGCGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: GCSITLGSEDSRLLHSGSLLDGA*ARTRAQ Trigger: CTGCGCGCGCGTGCGCGCGCACGCTCCATCCAAGAG...ACTACCAGAGTGAAGCAACCTTGAGTCTTCAGAGCCTAGAGTGATGGAACAGCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR GCA 90 bp | AGAAACCGCCAAATGAGGAGAACGGTTTATTCAGTGAGGAGTCTGGCAGGAGACCTCTTGGATGGAGCGTaGGCGCGCACGCGCGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: RNRQMRRTVYSVRSLAGDLLDGA*ARTRAQ Trigger: CTGCGCGCGCGTGCGCGCGCACGCTCCATCCAAGAG...GTCTCCTGCCAGACTCCTCACTGAATAAACCGTTCTCCTCATTTGGCGGTTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR GCA 90 bp | AGGCCCTTTCTAGAATTTGGCAAAGTCGGGTGGTACAGAAACCGCCAAATGAGGGTTGGCGCCCAGGTGTaGTGCGCGCAGAGCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: RPFLEFGKVGWYRNRQMRVGAQV*CAQSRQ Trigger: TTGCCTGCTCTGCGCGCAGCACACCTGGGCGCCAAC...CCTCATTTGGCGGTTTCTGTACCACCCGACTTTGCCAAATTCTAGAAAGGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CCA 90 bp | AGGAGACTGGGCTGTTCCATCACTCTAGGCTCTGAAGACTCAAGGTTGCTTCACACCAGCAGTGCTAGCTaGGCCACCAGTGCTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RRLGCSITLGSEDSRLLHTSSAS*ATSAPQ Trigger: CTGGGGAGCACTGGTGGCCCAGCTAGCACTGCTGGT...GTGAAGCAACCTTGAGTCTTCAGAGCCTAGAGTGATGGAACAGCCCAGTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR TCA 90 bp | GGCTGTTCCATCACTCTAGGCTCTGAAGACTCAAGGTTGCTTCACTCTGGTAGTCCACCAGCGGGGCTGTaGGAGAGAACTCTTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: GCSITLGSEDSRLLHSGSPPAGL*ERTLGW Trigger: CCATCCAAGAGTTCTCTCTCACAGCCCCGCTGGTGG...ACTACCAGAGTGAAGCAACCTTGAGTCTTCAGAGCCTAGAGTGATGGAACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR GCA 90 bp | GGCTGTTCCATCACTCTAGGCTCTGAAGACTCAAGGTTGCTTCACTCTGGTAGTGCGCCGTCAGGTTGTTaGCGGTCAGCACCAATTCGG | + |
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Preference number: 4 (lower is better) Translates to: GCSITLGSEDSRLLHSGSAPSGC*RSAPIR Trigger: CCGAATTGGTGCTGACCGGCAACAACCTGACGGCGC...ACTACCAGAGTGAAGCAACCTTGAGTCTTCAGAGCCTAGAGTGATGGAACAGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR GCA 90 bp | CAACATTCCCTCAGGCCCTTTCTAGAATTTGGCAAAGTCGGGTGGTACAGAAACGCGCCGTCAGGTTGTTaGCGGTCAGCACCAATTCGG | + |
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Preference number: 4 (lower is better) Translates to: QHSLRPFLEFGKVGWYRNAPSGC*RSAPIR Trigger: CCGAATTGGTGCTGACCGGCAACAACCTGACGGCGC...GTTTCTGTACCACCCGACTTTGCCAAATTCTAGAAAGGGCCTGAGGGAATGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CCA 90 bp | AGACTGGGCTGTTCCATCACTCTAGGCTCTGAAGACTCAAGGTTGCTTCACTCTTCAGCACCAATTCGGTaGTGTCGGGAGGGAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RLGCSITLGSEDSRLLHSSAPIR*CREGRQ Trigger: CTGCCTTCCCTCCCGACACCACCGAATTGGTGCTGA...AGAGTGAAGCAACCTTGAGTCTTCAGAGCCTAGAGTGATGGAACAGCCCAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CCA 90 bp | CAACATTCCCTCAGGCCCTTTCTAGAATTTGGCAAAGTCGGGTGGTACAGAAACTCAGCACCAATTCGGTaGTGTCGGGAGGGAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QHSLRPFLEFGKVGWYRNSAPIR*CREGRQ Trigger: CTGCCTTCCCTCCCGACACCACCGAATTGGTGCTGA...GTTTCTGTACCACCCGACTTTGCCAAATTCTAGAAAGGGCCTGAGGGAATGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CAA 90 bp | TCAGTTTGGCACCATGTTGATTCAGGCTTGCAGAGCTCGGGTCTGGGAGGTTGGTCGCAGCGCCAGGGGTaGGCGCCCAGGTGTGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: SVWHHVDSGLQSSGLGGWSQRQG*APRCAA Trigger: CGCAGCACACCTGGGCGCCAACCCCTGGCGCTGCGA...CCAACCTCCCAGACCCGAGCTCTGCAAGCCTGAATCAACATGGTGCCAAACTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CAA 90 bp | AGAAACCGCCAAATGAGGAGAACGGTTTATTCAGTGAGGAGTCTGGCAGGAGACGGCAGCGCCGTCAGGTaGTTGCCGGTCAGCACCAAT | + |
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Preference number: 5 (lower is better) Translates to: RNRQMRRTVYSVRSLAGDGSAVR*LPVSTN Trigger: ATTGGTGCTGACCGGCAACAACCTGACGGCGCTGCC...GTCTCCTGCCAGACTCCTCACTGAATAAACCGTTCTCCTCATTTGGCGGTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CAA 90 bp | AGGCCCTTTCTAGAATTTGGCAAAGTCGGGTGGTACAGAAACCGCCAAATGAGGGGCAGCGCCGTCAGGTaGTTGCCGGTCAGCACCAAT | + |
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Preference number: 5 (lower is better) Translates to: RPFLEFGKVGWYRNRQMRGSAVR*LPVSTN Trigger: ATTGGTGCTGACCGGCAACAACCTGACGGCGCTGCC...CCTCATTTGGCGGTTTCTGTACCACCCGACTTTGCCAAATTCTAGAAAGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CAA 90 bp | AGAAACCGCCAAATGAGGAGAACGGTTTATTCAGTGAGGAGTCTGGCAGGAGACAGCGCCGTCAGGTTGTaGCCGGTCAGCACCAATTCG | + |
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Preference number: 5 (lower is better) Translates to: RNRQMRRTVYSVRSLAGDSAVRL*PVSTNS Trigger: CGAATTGGTGCTGACCGGCAACAACCTGACGGCGCT...GTCTCCTGCCAGACTCCTCACTGAATAAACCGTTCTCCTCATTTGGCGGTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CAA 90 bp | AAACCGCCAAATGAGGAGAACGGTTTATTCAGTGAGGAGTCTGGCAGGAGACTGTGTGAGAGAGAACTCTaGGATGGAGCGTGCGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: KPPNEENGLFSEESGRRLCEREL*DGACAR Trigger: GCGCGCGCACGCTCCATCCAAGAGTTCTCTCTCACA...CAGTCTCCTGCCAGACTCCTCACTGAATAAACCGTTCTCCTCATTTGGCGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CAA 90 bp | AGGCCCTTTCTAGAATTTGGCAAAGTCGGGTGGTACAGAAACCGCCAAATGAGGTGTGAGAGAGAACTCTaGGATGGAGCGTGCGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: RPFLEFGKVGWYRNRQMRCEREL*DGACAR Trigger: GCGCGCGCACGCTCCATCCAAGAGTTCTCTCTCACA...CCTCATTTGGCGGTTTCTGTACCACCCGACTTTGCCAAATTCTAGAAAGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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| CDS-3UTR CAA 90 bp | CAACATTCCCTCAGGCCCTTTCTAGAATTTGGCAAAGTCGGGTGGTACAGAAACAGCGCCGTCAGGTTGTaGCCGGTCAGCACCAATTCG | + |
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Preference number: 5 (lower is better) Translates to: QHSLRPFLEFGKVGWYRNSAVRL*PVSTNS Trigger: CGAATTGGTGCTGACCGGCAACAACCTGACGGCGCT...GTTTCTGTACCACCCGACTTTGCCAAATTCTAGAAAGGGCCTGAGGGAATGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051160.4 ENSMUST00000167388.3 |
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