Pregenerated sensors for GOT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031672Ensembl transcript IDs: ENSMUST00000034097.8
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CACGGCTCTTTGATGAGAGAGGAGGCTATGCAGGAGCAGAAAACCTATGCTCTCTTCCAGTGCCATGGCTaGCAGGTGTTTGGTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: HGSLMREEAMQEQKTYALFQCHG*QVFGAV Trigger: CACAGCACCAAACACCTGTCAGCCATGGCACTGGAA...GAGAGCATAGGTTTTCTGCTCCTGCATAGCCTCCTCTCTCATCAAAGAGCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGATGGCTGACAGGTGTTTaGTGCTGTGATTTTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: CEETGCAARMDEEVQLGRWLTGV*CCDFSC Trigger: GCAAGAAAAATCACAGCACCAAACACCTGTCAGCCA...TCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGAGGGAGCAGAAAACCTATaGTCTCCATTCTTATGTAAC | + |
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Preference number: 2 (lower is better) Translates to: VKRQAVQPGWMKRSSWAEGAENL*SPFLCN Trigger: GTTACATAAGAATGGAGAGCATAGGTTTTCTGCTCC...CTCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGAAACTTTCAGAAAAGCTaGAGACAAAAGGATGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: CEETGCAARMDEEVQLGRNFQKS*RQKDEG Trigger: TCCCTCATCCTTTTGTCTCCAGCTTTTCTGAAAGTT...TCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| 3UTR-3UTR CCA 90 bp | CACGGCTCTTTGATGAGAGAGGAGGCTATGCAGGAGCAGAAAACCTATGCTCTCCTGTCCCTGTTGAAGTaGCAACAGACCTGTTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: HGSLMREEAMQEQKTYALLSLLK*QQTCWF Trigger: AAACCAACAGGTCTGTTGCCACTTCAACAGGGACAG...GAGAGCATAGGTTTTCTGCTCCTGCATAGCCTCCTCTCTCATCAAAGAGCCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGAATAATTTCTGTAATGTaGTCTGCTGACACAGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: CEETGCAARMDEEVQLGRIISVM*SADTVC Trigger: GCAAACTGTGTCAGCAGACCACATTACAGAAATTAT...TCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCCCTGTTGAAGTGGCAACAGACCTGTTGGTTTTTGTAAAGCATAATTTCTGTAATGTGGTCTGCTaGCACAGTTTGCTCCACACC | + |
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Preference number: 2 (lower is better) Translates to: TVPVEVATDLLVFVKHNFCNVVC*HSLLHT Trigger: GGTGTGGAGCAAACTGTGTCAGCAGACCACATTACA...GAAATTATGCTTTACAAAAACCAACAGGTCTGTTGCCACTTCAACAGGGACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| 3UTR GCA 72 bp | GCCGACGAAGTTCCAGATACCAGCCGAGGAAGCCTCTaGCCTACCTCTCTTCCGAGGAGCGAGTTCAGTCGC | + |
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Preference number: 3 (lower is better) Translates to: ADEVPDTSRGSL*PTSLPRSEFSR Trigger: GCGACTGAACTCGCTCCTCGGAAGAGAGGTAGGGCAGAGGCTTCCTCGGCTGGTATCTGGAACTTCGTCGGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| 3UTR GCA 72 bp | ACACAAACCCCAGAGTATCTCCTTCTGATCCTACCCTaGACGTCTGACTCATGTGAAGAGACAGGCTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: TQTPEYLLLILP*TSDSCEETGCA Trigger: TGCACAGCCTGTCTCTTCACATGAGTCAGACGTGCAGGGTAGGATCAGAAGGAGATACTCTGGGGTTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR TCA 90 bp | CACCACCCACCCTCCCTCACCCTGCACGTGACGCTCACGAGCGCAAAGGCTGTCTGCCGATCTGGTCGGTaGTGTGCTGCCAGTTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: HHPPSLTLHVTLTSAKAVCRSGR*CAASCG Trigger: CCCACAACTGGCAGCACATCACCGACCAGATCGGCA...GACAGCCTTTGCGCTCGTGAGCGTCACGTGCAGGGTGAGGGAGGGTGGGTGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR TCA 90 bp | AGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGAGGCCCCAGCATGCCGGCATCCCTaGAGATGGGCGTGTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: RQAVQPGWMKRSSWAEAPACRHP*RWACDF Trigger: GAAATCACACGCCCATCTTCAGGGATGCCGGCATGC...TGGGGCCTCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR GCA 90 bp | CACCACCCACCCTCCCTCACCCTGCACGTGACGCTCACGAGCGCAAAGGCTGTCACCTCTTGCAACCATTaGTTCCGCAAGTCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: HHPPSLTLHVTLTSAKAVTSCNH*FRKSGE Trigger: TTCTCCAGACTTGCGGAAGCAATGGTTGCAAGAGGT...GACAGCCTTTGCGCTCGTGAGCGTCACGTGCAGGGTGAGGGAGGGTGGGTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR TCA 90 bp | GAAGAGGACTCTGAAATCAAGGGCAGGGTCTCTCTCTCTCCACGGCTCTTTGATGCAGCTAGGCCTGGGTaGAAGGCAGCAGCCATCCCG | + |
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Preference number: 4 (lower is better) Translates to: EEDSEIKGRVSLSPRLFDAARPG*KAAAIP Trigger: CGGGATGGCTGCTGCCTTTCACCCAGGCCTAGCTGC...ATCAAAGAGCCGTGGAGAGAGAGAGACCCTGCCCTTGATTTCAGAGTCCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR GCA 90 bp | GGGTCTCTCTCTCTCCACGGCTCTTTGATGAGAGAGGAGGCTATGCAGGAGCAGAGTCAGGATGGTTGCTaGGATCCGGGCCCCATTGAG | + |
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Preference number: 4 (lower is better) Translates to: GSLSLHGSLMREEAMQEQSQDGC*DPGPIE Trigger: CTCAATGGGGCCCGGATCGCAGCAACCATCCTGACT...CTGCTCCTGCATAGCCTCCTCTCTCATCAAAGAGCCGTGGAGAGAGAGAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR GCA 90 bp | TGTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGATGGTCGGTGATGTGCTaGCAGTTGTGGGAAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: CEETGCAARMDEEVQLGRWSVMC*QLWEEP Trigger: GGGCTCTTCCCACAACTGGCAGCACATCACCGACCA...TCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CCA 90 bp | GTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGAGCAGAACATGCCGATCTaGTCGGTGATGTGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VKRQAVQPGWMKRSSWAEQNMPI*SVMCCQ Trigger: CTGGCAGCACATCACCGACCAGATCGGCATGTTCTG...CTCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR GCA 90 bp | CACGGCTCTTTGATGAGAGAGGAGGCTATGCAGGAGCAGAAAACCTATGCTCTCGCCAGAGGTGACCCCTaGCACGGAGATTCGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: HGSLMREEAMQEQKTYALARGDP*HGDSAI Trigger: GATGGCCGAATCTCCGTGGCAGGGGTCACCTCTGGC...GAGAGCATAGGTTTTCTGCTCCTGCATAGCCTCCTCTCTCATCAAAGAGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CCA 90 bp | AGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGAGGCCCCAGTGACTCCACCCTTTTaGCTTCTTCTGCATCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: RQAVQPGWMKRSSWAEAPVTPPF*LLLHLC Trigger: GCAAAGATGCAGAAGAAGCCAAAAGGGTGGAGTCAC...TGGGGCCTCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| 3UTR CAA 72 bp | GAGGAGCGAGTTCAGTCGCTGAGTTATGCACCGTGGTaGGAAACCGGATCTATTCACCACCACCCACCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EERVQSLSYAPW*ETGSIHHHPPS Trigger: GGAGGGTGGGTGGTGGTGAATAGATCCGGTTTCCAACCACGGTGCATAACTCAGCGACTGAACTCGCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR TCA 90 bp | TGTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGACTGGCTTTAGGCCGGTaGAACAGAACATGCCGATCT | + |
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Preference number: 4 (lower is better) Translates to: CEETGCAARMDEEVQLGRLALGR*NRTCRS Trigger: AGATCGGCATGTTCTGTTTCACCGGCCTAAAGCCAG...TCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CCA 90 bp | AGATACCAGCCGAGGAAGCCTCTGCCCTACCTCTCTTCCGAGGAGCGAGTTCAGTTGCTTCCGCAAGTCTaGAGAAGTCAGGATGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RYQPRKPLPYLSSEERVQLLPQV*RSQDGC Trigger: GCAACCATCCTGACTTCTCCAGACTTGCGGAAGCAA...CTGAACTCGCTCCTCGGAAGAGAGGTAGGGCAGAGGCTTCCTCGGCTGGTATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR GCA 90 bp | GACTCATGTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGCCCAGGGCCAGTTCTaGAGAAGCCTTACAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: DSCEETGCAARMDEEVQLAQGQF*RSLTEF Trigger: GAATTCTGTAAGGCTTCTGCAGAACTGGCCCTGGGC...CAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCACATGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR GCA 90 bp | GTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGAGAGGAGGAGGACACTCTaGTCTGGGATTTTTGATATG | + |
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Preference number: 4 (lower is better) Translates to: VKRQAVQPGWMKRSSWAERRRTL*SGIFDM Trigger: CATATCAAAAATCCCAGAGCAGAGTGTCCTCCTCCT...CTCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| 3UTR CAA 72 bp | AAATCAAGGGCAGGGTCTCTCTCTCTCCACGGCTCTTaGATGAGAGAGGAGGCTATGCAGGAGCAGAAAACC | + |
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Preference number: 4 (lower is better) Translates to: KSRAGSLSLHGS*MREEAMQEQKT Trigger: GGTTTTCTGCTCCTGCATAGCCTCCTCTCTCATCAAAGAGCCGTGGAGAGAGAGAGACCCTGCCCTTGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CAA 90 bp | AGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGAGGCCCCAGAGAAGTCAGGATGGTaGCTGCGATCCGGGCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: RQAVQPGWMKRSSWAEAPEKSGW*LRSGPH Trigger: ATGGGGCCCGGATCGCAGCAACCATCCTGACTTCTC...TGGGGCCTCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CAA 90 bp | CACCACCCACCCTCCCTCACCCTGCACGTGACGCTCACGAGCGCAAAGGCTGTCCACCTCTTGCAACCATaGCTTCCGCAAGTCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: HHPPSLTLHVTLTSAKAVHLLQP*LPQVWR Trigger: TCTCCAGACTTGCGGAAGCAATGGTTGCAAGAGGTG...GACAGCCTTTGCGCTCGTGAGCGTCACGTGCAGGGTGAGGGAGGGTGGGTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CAA 90 bp | GTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGGGCAGAGGTGATGTGCTGCCAGTaGTGGGAAGAGCCCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: VKRQAVQPGWMKRSSWAEVMCCQ*WEEPSF Trigger: GAAAGAGGGCTCTTCCCACAACTGGCAGCACATCAC...CTCTGCCCAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CAA 90 bp | GGGTCTCTCTCTCTCCACGGCTCTTTGATGAGAGAGGAGGCTATGCAGGAGCAGTGGCAGAGGCAGACATaGATGCCCTGCTCGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: GSLSLHGSLMREEAMQEQWQRQT*MPCSMK Trigger: CTTCATCGAGCAGGGCATCAATGTCTGCCTCTGCCA...CTGCTCCTGCATAGCCTCCTCTCTCATCAAAGAGCCGTGGAGAGAGAGAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CAA 90 bp | CACGGCTCTTTGATGAGAGAGGAGGCTATGCAGGAGCAGAAAACCTATGCTCTCCTGTTGGTATCTCTCTaGAAGGCTTCGGTAACGCCC | + |
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Preference number: 5 (lower is better) Translates to: HGSLMREEAMQEQKTYALLLVSL*KASVTP Trigger: GGGCGTTACCGAAGCCTTCAAGAGAGATACCAACAG...GAGAGCATAGGTTTTCTGCTCCTGCATAGCCTCCTCTCTCATCAAAGAGCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CAA 90 bp | GGGTCTCTCTCTCTCCACGGCTCTTTGATGAGAGAGGAGGCTATGCAGGAGCAGTCTGCTCTGGGATTTTaGATATGTCTTCTAGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GSLSLHGSLMREEAMQEQSALGF*ICLLGL Trigger: GAGCCCTAGAAGACATATCAAAAATCCCAGAGCAGA...CTGCTCCTGCATAGCCTCCTCTCTCATCAAAGAGCCGTGGAGAGAGAGAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CAA 90 bp | GACTCATGTGAAGAGACAGGCTGTGCAGCCAGGATGGATGAAGAGGTCCAGCTGTTCATCTTCTTGCTGTaGGTATCTCTCTTGAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: DSCEETGCAARMDEEVQLFIFLL*VSLLKA Trigger: AGCCTTCAAGAGAGATACCAACAGCAAGAAGATGAA...CAGCTGGACCTCTTCATCCATCCTGGCTGCACAGCCTGTCTCTTCACATGAGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CAA 90 bp | CACGGCTCTTTGATGAGAGAGGAGGCTATGCAGGAGCAGAAAACCTATGCTCTCCCCAGGTTCATCTTCTaGCTGTTGGTATCTCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: HGSLMREEAMQEQKTYALPRFIF*LLVSLL Trigger: CAAGAGAGATACCAACAGCAAGAAGATGAACCTGGG...GAGAGCATAGGTTTTCTGCTCCTGCATAGCCTCCTCTCTCATCAAAGAGCCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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| CDS-3UTR CAA 90 bp | ACTGTCCCTGTTGAAGTGGCAACAGACCTGTTGGTTTTTGTAAAGCATAATTTCCCATTGAGAGGTGGGTaGGAATACAGGGGACGGATC | + |
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Preference number: 5 (lower is better) Translates to: TVPVEVATDLLVFVKHNFPLRGG*EYRGRI Trigger: GATCCGTCCCCTGTATTCCAACCCACCTCTCAATGG...GAAATTATGCTTTACAAAAACCAACAGGTCTGTTGCCACTTCAACAGGGACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034097.8 |
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