Pregenerated sensors for GOT1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039720Ensembl transcript IDs: ENSMUST00000038174.8
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR TCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGCTCTGTCGGGTGATGTaGTCCCACGACCCAGGGGTC | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGLCRVM*SHDPGV Trigger: GACCCCTGGGTCGTGGGATCACATCACCCGACAGAG...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR TCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGGCAGGTGCTGGTTGCTaGGGGCAGCCACTACTAGGA | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGAGAGC*GQPLLG Trigger: TCCTAGTAGTGGCTGCCCTCAGCAACCAGCACCTGC...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR GCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGAGGACACACAGCAGGTaGTGGTTGCTGAGGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGRTHSR*WLLRAA Trigger: GGCTGCCCTCAGCAACCAGCACCTGCTGTGTGTCCT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR TCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGTGCAGAGGATGGAGGTaGTTATCCGAGCACCCGTGG | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGCRGWR*LSEHPW Trigger: CCACGGGTGCTCGGATAATCACCTCCATCCTCTGCA...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR GCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGCAGAGAGGGGTCCTCTaGAATCTGCAGGCGGGTCTT | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGQRGVL*NLQAGL Trigger: AAGACCCGCCTGCAGATTGCAGAGGACCCCTCTCTG...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR GCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGTGCAGGCGGGTCTTGTaGACCACAAGAGAAACCCAG | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGCRRVL*TTRETQ Trigger: CTGGGTTTCTCTTGTGGTGCACAAGACCCGCCTGCA...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR TCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGAGAAGACTGGATGAATaGTTTCAGGCCCACCAGGGG | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGRRLDE*FQAHQG Trigger: CCCCTGGTGGGCCTGAAATCATTCATCCAGTCTTCT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGAGAGAAACCCAGGGATaGCCTTCTTCGGTCATGCAG | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGRETQG*PSSVMQ Trigger: CTGCATGACCGAAGAAGGCCATCCCTGGGTTTCTCT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGCTTCCACGAACATGCTaGGGTCTGAGCAGAGATCAC | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGLPRTC*GLSRDH Trigger: GTGATCTCTGCTCAGACCCCAGCATGTTCGTGGAAG...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR TCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGCCAGAGAAGACTGGATaGATGATTTCAGGCCCACCA | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGPEKTG*MISGPP Trigger: TGGTGGGCCTGAAATCATTCATCCAGTCTTCTCTGG...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR GCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGGCAATGGCTTCGCTGTaGTTTCCAAAGAGGAGTTCC | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGAMASL*FPKRSS Trigger: GGAACTCCTCTTTGGAAAGCACAGCGAAGCCATTGC...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGCCCTTTTCTCCGCAATaGCTTCGCTGTGCTTTCCAA | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGPFSPQ*LRCAFQ Trigger: TTGGAAAGCACAGCGAAGCCATTGCGGAGAAAAGGG...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGCCTCGAGGTCACCAGTaGATAAACCTTGACAGGGAA | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGPRGHQ*INLDRE Trigger: TTCCCTGTCAAGGTTTATCCACTGGTGACCTCGAGG...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR GCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGTGGACAGAGATTGGCTaGAGAAGAACTCCAAGCCTA | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGWTEIG*RRTPSL Trigger: TAGGCTTGGAGTTCTTCTGCAGCCAATCTCTGTCCA...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR GCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGAGATCTTTAGTAAGCTaGCTTCTAGCTTCTGGGCTG | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGRSLVS*LLASGL Trigger: CAGCCCAGAAGCTAGAAGGCAGCTTACTAAAGATCT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGAGTTCCAGAGAAGACTaGATGAATGATTTCAGGCCC | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGSSRED*MNDFRP Trigger: GGGCCTGAAATCATTCATCCAGTCTTCTCTGGAACT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGATAAAGCCCATGTCCTaGAAGATGAGTCCACACTGT | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGIKPMS*KMSPHC Trigger: ACAGTGTGGACTCATCTTCCAGGACATGGGCTTTAT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGTTCTTGGACAGAGATTaGCTGCAGAAGAACTCCAAG | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGFLDRD*LQKNSK Trigger: CTTGGAGTTCTTCTGCAGCCAATCTCTGTCCAAGAA...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR TCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGCCACACTGTTCTTTTTaGCATGAGACGATACAAACG | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGPHCSF*HETIQT Trigger: CGTTTGTATCGTCTCATGTCAAAAAGAACAGTGTGG...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR TCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGATCAGTTTCGTCCACTaGTTCTGTGTGAACTTGCAA | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGISFVH*FCVNLQ Trigger: TTGCAAGTTCACACAGAATCAGTGGACGAAACTGAT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR TCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGCCAGTGGATAAACCTTaGCAGGGAATGTCAAAGAAT | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGPVDKP*QGMSKN Trigger: ATTCTTTGACATTCCCTGTCAAGGTTTATCCACTGG...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR GCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGACACCTTTGAGACTCTaGTTCCATTCTCCAAACAGA | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGTPLRL*FHSPNR Trigger: TCTGTTTGGAGAATGGAAGCAGAGTCTCAAAGGTGT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR TCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGAGATATGTTTCTTCTTaGCCAGAAACTCCACCTGTT | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGRYVSS*PETPPV Trigger: AACAGGTGGAGTTTCTGGTCAAGAAGAAACATATCT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGAAATGCCAAAATTCTTaGACAGAGATTGGCTGCAGA | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGKCQNS*TEIGCR Trigger: TCTGCAGCCAATCTCTGTCCAAGAATTTTGGCATTT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR GCA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGAAGAATGGGAATATCTaGTTGCTCTTAATGATGGAC | + |
Preference number: 4 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGKNGNI*LLLMMD Trigger: GTCCATCATTAAGAGCAAGCAGATATTCCCATTCTT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS GCA 90 bp | CAGGCCCACCAGGGGCAAGTACTCATAGTCCAGAGAGGGGTCCTCTaGAATCTGCAGGCGGGTCTTGTGCACCACAAGAGAAACCCAGGG | + |
Preference number: 5 (lower is better) Translates to: QAHQGQVLIVQRGVL*NLQAGLVHHKRNPG Trigger: CCCTGGGTTTCTCTTGTGGTGCACAAGACCCGCCTGCAGATTGCAGAGGACCCCTCTCTGGACTATGAGTACTTGCCCCTGGTGGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 90 bp | TCTGCTTCCATTCTCCAAACAGAGCAGGGTTGCAGAGGATGGAGGTaGTTATCCGAGCACCCGTGGCAGGAGGGTTTCCCCACAGGGCCT | + |
Preference number: 5 (lower is better) Translates to: SASILQTEQGCRGWR*LSEHPWQEGFPTGP Trigger: AGGCCCTGTGGGGAAACCCTCCTGCCACGGGTGCTCGGATAATCACCTCCATCCTCTGCAACCCTGCTCTGTTTGGAGAATGGAAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CCA 90 bp | CACTCTCACCAACGATGTGCACACCCCCAACCCTTTTCTCCGCAATaGCTTCGCTGTGCTTTCCAAAGAGGAGTTCCAGAGAAGACTGGA | + |
Preference number: 5 (lower is better) Translates to: HSHQRCAHPQPFSPQ*LRCAFQRGVPEKTG Trigger: TCCAGTCTTCTCTGGAACTCCTCTTTGGAAAGCACAGCGAAGCCATTGCGGAGAAAAGGGTTGGGGGTGTGCACATCGTTGGTGAGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CCA 90 bp | TCAGTGATGTTCCCAATCACAAGGATGCTGCCGACCGGGATATGCTaGAGTACTTCCACGAACATGCTGGGGTCTGAGCAGAGATCACTG | + |
Preference number: 5 (lower is better) Translates to: SVMFPITRMLPTGIC*STSTNMLGSEQRSL Trigger: CAGTGATCTCTGCTCAGACCCCAGCATGTTCGTGGAAGTACTCCAGCATATCCCGGTCGGCAGCATCCTTGTGATTGGGAACATCACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS GCA 90 bp | CAATCAGTGATGTTCCCAATCACAAGGATGCTGCCGACCGGGATATaGTGGAGTACTTCCACGAACATGCTGGGGTCTGAGCAGAGATCA | + |
Preference number: 5 (lower is better) Translates to: QSVMFPITRMLPTGI*WSTSTNMLGSEQRS Trigger: TGATCTCTGCTCAGACCCCAGCATGTTCGTGGAAGTACTCCAGCATATCCCGGTCGGCAGCATCCTTGTGATTGGGAACATCACTGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS GCA 90 bp | TCTTGTGCACCACAAGAGAAACCCAGGGATGGCCTTCTTCGGTCATaGAGACTTTGTAGGCCAGGAACAACTTGCTGGGATAGCCATCTT | + |
Preference number: 5 (lower is better) Translates to: SCAPQEKPRDGLLRS*RLCRPGTTCWDSHL Trigger: AAGATGGCTATCCCAGCAAGTTGTTCCTGGCCTACAAAGTCTGCATGACCGAAGAAGGCCATCCCTGGGTTTCTCTTGTGGTGCACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 90 bp | ACGATACAAACGATTTTCACATTCTTTCGCCACGTCTTGAGGAACTaGGCCCCAAGCTGGAAGGCTCCACTCTCACCAACGATGTGCACA | + |
Preference number: 5 (lower is better) Translates to: TIQTIFTFFRHVLRN*APSWKAPLSPTMCT Trigger: TGTGCACATCGTTGGTGAGAGTGGAGCCTTCCAGCTTGGGGCTCAGTTCCTCAAGACGTGGCGAAAGAATGTGAAAATCGTTTGTATCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 90 bp | GACATGAGACGATACAAACGATTTTCACATTCTTTCGCCACGTCTTaGGGAACTGAGCCCCAAGCTGGAAGGCTCCACTCTCACCAACGA | + |
Preference number: 5 (lower is better) Translates to: DMRRYKRFSHSFATS*GTEPQAGRLHSHQR Trigger: TCGTTGGTGAGAGTGGAGCCTTCCAGCTTGGGGCTCAGTTCCTCAAGACGTGGCGAAAGAATGTGAAAATCGTTTGTATCGTCTCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CAA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGCACAGCAGGTGCTGGTaGCTGAGGGCAGCCACTACT | + |
Preference number: 5 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGHSRCW*LRAATT Trigger: AGTAGTGGCTGCCCTCAGCAACCAGCACCTGCTGTG...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CAA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGCCAAACAGAGCAGGGTaGCAGAGGATGGAGGTGATT | + |
Preference number: 5 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGPNRAG*QRMEVI Trigger: AATCACCTCCATCCTCTGCAACCCTGCTCTGTTTGG...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CCA 90 bp | TGCAGAAGAACTCCAAGCCTAGGGACACAAAGTACTGTAAGATTTTaGTATCTTCCTCGAGGTCACCAGTGGATAAACCTTGACAGGGAA | + |
Preference number: 5 (lower is better) Translates to: CRRTPSLGTQSTVRF*YLPRGHQWINLDRE Trigger: TTCCCTGTCAAGGTTTATCCACTGGTGACCTCGAGGAAGATACCAAAATCTTACAGTACTTTGTGTCCCTAGGCTTGGAGTTCTTCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 90 bp | AAAGCCCATGTCCTGGAAGATGAGTCCACACTGTTCTTTTTGACATaGGACGATACAAACGATTTTCACATTCTTTCGCCACGTCTTGAG | + |
Preference number: 5 (lower is better) Translates to: KAHVLEDESTLFFLT*DDTNDFHILSPRLE Trigger: CTCAAGACGTGGCGAAAGAATGTGAAAATCGTTTGTATCGTCTCATGTCAAAAAGAACAGTGTGGACTCATCTTCCAGGACATGGGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 90 bp | GGGAATATCTGCTTGCTCTTAATGATGGACATCAGTTTCGTCCACTaGTTCTGTGTGAACTTGCAATCAGTGATGTTCCCAATCACAAGG | + |
Preference number: 5 (lower is better) Translates to: GNICLLLMMDISFVH*FCVNLQSVMFPITR Trigger: CCTTGTGATTGGGAACATCACTGATTGCAAGTTCACACAGAATCAGTGGACGAAACTGATGTCCATCATTAAGAGCAAGCAGATATTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CAA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGATTCTTGGACAGAGATaGGCTGCAGAAGAACTCCAA | + |
Preference number: 5 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGILGQR*AAEELQ Trigger: TTGGAGTTCTTCTGCAGCCAATCTCTGTCCAAGAAT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 90 bp | ACTATAAAGCCCATGTCCTGGAAGATGAGTCCACACTGTTCTTTTTaGCATGAGACGATACAAACGATTTTCACATTCTTTCGCCACGTC | + |
Preference number: 5 (lower is better) Translates to: TIKPMSWKMSPHCSF*HETIQTIFTFFRHV Trigger: GACGTGGCGAAAGAATGTGAAAATCGTTTGTATCGTCTCATGTCAAAAAGAACAGTGTGGACTCATCTTCCAGGACATGGGCTTTATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS GCA 90 bp | CCACTCCTTCATCATAAATGCCAAAATTCTTGGACAGAGATTGGCTaGAGAAGAACTCCAAGCCTAGGGACACAAAGTACTGTAAGATTT | + |
Preference number: 5 (lower is better) Translates to: PLLHHKCQNSWTEIG*RRTPSLGTQSTVRF Trigger: AAATCTTACAGTACTTTGTGTCCCTAGGCTTGGAGTTCTTCTGCAGCCAATCTCTGTCCAAGAATTTTGGCATTTATGATGAAGGAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CAA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGTCTATATTCCTGGCATaGATGCAGGTGAAGTTGATC | + |
Preference number: 5 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGSIFLA*MQVKLI Trigger: GATCAACTTCACCTGCATCAATGCCAGGAATATAGA...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 90 bp | TGTAAGATTTTGGTATCTTCCTCGAGGTCACCAGTGGATAAACCTTaGCAGGGAATGTCAAAGAATGGGAATATCTGCTTGCTCTTAATG | + |
Preference number: 5 (lower is better) Translates to: CKILVSSSRSPVDKP*QGMSKNGNICLLLM Trigger: CATTAAGAGCAAGCAGATATTCCCATTCTTTGACATTCCCTGTCAAGGTTTATCCACTGGTGACCTCGAGGAAGATACCAAAATCTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CCA 90 bp | ACACAAAGTACTGTAAGATTTTGGTATCTTCCTCGAGGTCACCAGTaGATAAACCTTGACAGGGAATGTCAAAGAATGGGAATATCTGCT | + |
Preference number: 5 (lower is better) Translates to: TQSTVRFWYLPRGHQ*INLDRECQRMGISA Trigger: AGCAGATATTCCCATTCTTTGACATTCCCTGTCAAGGTTTATCCACTGGTGACCTCGAGGAAGATACCAAAATCTTACAGTACTTTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS-3UTR CAA 90 bp | TCCTCCAGGATTTTTATTTTCAAAGACAGCGTAAAGCTTTCGTTCCAGTCAGGGAATGGGAATATCTGCTaGCTCTTAATGATGGACATC | + |
Preference number: 5 (lower is better) Translates to: SSRIFIFKDSVKLSFQSGNGNIC*LLMMDI Trigger: GATGTCCATCATTAAGAGCAAGCAGATATTCCCATT...CCCTGACTGGAACGAAAGCTTTACGCTGTCTTTGAAAATAAAAATCCTGGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CAA 72 bp | TCCAGAGAGGGGTCCTCTGCAATCTGCAGGCGGGTCTaGTGCACCACAAGAGAAACCCAGGGATGGCCTTCT | + |
Preference number: 6 (lower is better) Translates to: SREGSSAICRRV*CTTRETQGWPS Trigger: AGAAGGCCATCCCTGGGTTTCTCTTGTGGTGCACAAGACCCGCCTGCAGATTGCAGAGGACCCCTCTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 72 bp | ATTCTCCAAACAGAGCAGGGTTGCAGAGGATGGAGGTaGTTATCCGAGCACCCGTGGCAGGAGGGTTTCCCC | + |
Preference number: 6 (lower is better) Translates to: ILQTEQGCRGWR*LSEHPWQEGFP Trigger: GGGGAAACCCTCCTGCCACGGGTGCTCGGATAATCACCTCCATCCTCTGCAACCCTGCTCTGTTTGGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS GCA 72 bp | CAGGGGCAAGTACTCATAGTCCAGAGAGGGGTCCTCTaGAATCTGCAGGCGGGTCTTGTGCACCACAAGAGA | + |
Preference number: 6 (lower is better) Translates to: QGQVLIVQRGVL*NLQAGLVHHKR Trigger: TCTCTTGTGGTGCACAAGACCCGCCTGCAGATTGCAGAGGACCCCTCTCTGGACTATGAGTACTTGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CAA 90 bp | ACCACACCTTTGAGACTCTGCTTCCATTCTCCAAACAGAGCAGGGTaGCAGAGGATGGAGGTGATTATCCGAGCACCCGTGGCAGGAGGG | + |
Preference number: 6 (lower is better) Translates to: TTPLRLCFHSPNRAG*QRMEVIIRAPVAGG Trigger: CCCTCCTGCCACGGGTGCTCGGATAATCACCTCCATCCTCTGCAACCCTGCTCTGTTTGGAGAATGGAAGCAGAGTCTCAAAGGTGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CCA 72 bp | TTCCCAATCACAAGGATGCTGCCGACCGGGATATGCTaGAGTACTTCCACGAACATGCTGGGGTCTGAGCAG | + |
Preference number: 6 (lower is better) Translates to: FPITRMLPTGIC*STSTNMLGSEQ Trigger: CTGCTCAGACCCCAGCATGTTCGTGGAAGTACTCCAGCATATCCCGGTCGGCAGCATCCTTGTGATTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS GCA 72 bp | ATGTTCCCAATCACAAGGATGCTGCCGACCGGGATATaGTGGAGTACTTCCACGAACATGCTGGGGTCTGAG | + |
Preference number: 6 (lower is better) Translates to: MFPITRMLPTGI*WSTSTNMLGSE Trigger: CTCAGACCCCAGCATGTTCGTGGAAGTACTCCAGCATATCCCGGTCGGCAGCATCCTTGTGATTGGGAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CCA 72 bp | CAACGATGTGCACACCCCCAACCCTTTTCTCCGCAATaGCTTCGCTGTGCTTTCCAAAGAGGAGTTCCAGAG | + |
Preference number: 6 (lower is better) Translates to: QRCAHPQPFSPQ*LRCAFQRGVPE Trigger: CTCTGGAACTCCTCTTTGGAAAGCACAGCGAAGCCATTGCGGAGAAAAGGGTTGGGGGTGTGCACATCGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 72 bp | ACGATTTTCACATTCTTTCGCCACGTCTTGAGGAACTaGGCCCCAAGCTGGAAGGCTCCACTCTCACCAACG | + |
Preference number: 6 (lower is better) Translates to: TIFTFFRHVLRN*APSWKAPLSPT Trigger: CGTTGGTGAGAGTGGAGCCTTCCAGCTTGGGGCTCAGTTCCTCAAGACGTGGCGAAAGAATGTGAAAATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS GCA 72 bp | CCACAAGAGAAACCCAGGGATGGCCTTCTTCGGTCATaGAGACTTTGTAGGCCAGGAACAACTTGCTGGGAT | + |
Preference number: 6 (lower is better) Translates to: PQEKPRDGLLRS*RLCRPGTTCWD Trigger: ATCCCAGCAAGTTGTTCCTGGCCTACAAAGTCTGCATGACCGAAGAAGGCCATCCCTGGGTTTCTCTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CAA 72 bp | TTGAGACTCTGCTTCCATTCTCCAAACAGAGCAGGGTaGCAGAGGATGGAGGTGATTATCCGAGCACCCGTG | + |
Preference number: 6 (lower is better) Translates to: LRLCFHSPNRAG*QRMEVIIRAPV Trigger: CACGGGTGCTCGGATAATCACCTCCATCCTCTGCAACCCTGCTCTGTTTGGAGAATGGAAGCAGAGTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CAA 72 bp | TTCTCCTTGATCAGCATCATGTTCTCCACCACACCTTaGAGACTCTGCTTCCATTCTCCAAACAGAGCAGGG | + |
Preference number: 6 (lower is better) Translates to: FSLISIMFSTTP*RLCFHSPNRAG Trigger: CCCTGCTCTGTTTGGAGAATGGAAGCAGAGTCTCAAAGGTGTGGTGGAGAACATGATGCTGATCAAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CCA 72 bp | GGATCCCCACTCCTTCATCATAAATGCCAAAATTCTTaGACAGAGATTGGCTGCAGAAGAACTCCAAGCCTA | + |
Preference number: 6 (lower is better) Translates to: GSPLLHHKCQNS*TEIGCRRTPSL Trigger: TAGGCTTGGAGTTCTTCTGCAGCCAATCTCTGTCCAAGAATTTTGGCATTTATGATGAAGGAGTGGGGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CCA 72 bp | ACTCCAAGCCTAGGGACACAAAGTACTGTAAGATTTTaGTATCTTCCTCGAGGTCACCAGTGGATAAACCTT | + |
Preference number: 6 (lower is better) Translates to: TPSLGTQSTVRF*YLPRGHQWINL Trigger: AAGGTTTATCCACTGGTGACCTCGAGGAAGATACCAAAATCTTACAGTACTTTGTGTCCCTAGGCTTGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CAA 72 bp | AACTCCAAGCCTAGGGACACAAAGTACTGTAAGATTTaGGTATCTTCCTCGAGGTCACCAGTGGATAAACCT | + |
Preference number: 6 (lower is better) Translates to: NSKPRDTKYCKI*VSSSRSPVDKP Trigger: AGGTTTATCCACTGGTGACCTCGAGGAAGATACCAAAATCTTACAGTACTTTGTGTCCCTAGGCTTGGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 72 bp | TGCTTGCTCTTAATGATGGACATCAGTTTCGTCCACTaGTTCTGTGTGAACTTGCAATCAGTGATGTTCCCA | + |
Preference number: 6 (lower is better) Translates to: CLLLMMDISFVH*FCVNLQSVMFP Trigger: TGGGAACATCACTGATTGCAAGTTCACACAGAATCAGTGGACGAAACTGATGTCCATCATTAAGAGCAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS CCA 72 bp | ACTGTAAGATTTTGGTATCTTCCTCGAGGTCACCAGTaGATAAACCTTGACAGGGAATGTCAAAGAATGGGA | + |
Preference number: 6 (lower is better) Translates to: TVRFWYLPRGHQ*INLDRECQRMG Trigger: TCCCATTCTTTGACATTCCCTGTCAAGGTTTATCCACTGGTGACCTCGAGGAAGATACCAAAATCTTACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |
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CDS TCA 72 bp | CCCATGTCCTGGAAGATGAGTCCACACTGTTCTTTTTaGCATGAGACGATACAAACGATTTTCACATTCTTT | + |
Preference number: 6 (lower is better) Translates to: PMSWKMSPHCSF*HETIQTIFTFF Trigger: AAAGAATGTGAAAATCGTTTGTATCGTCTCATGTCAAAAAGAACAGTGTGGACTCATCTTCCAGGACATGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038174.8 |