Pregenerated sensors for GOT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025190Ensembl transcript IDs: ENSMUST00000026196.14, ENSMUST00000133325.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCGGGTCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTTGGGCTaGGGGATTGGACCAGGTGATTCGTACAATCTTCTCCATCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LRVREGGGHNPSSLG*GIGPGDSYNLLHLG Trigger: TCCCAGATGGAGAAGATTGTACGAATCACCTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCACCCTCTCTGACCCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR CCA 90 bp | AAGAGCTCCGGGTCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTTaGGCTGGGGGATTGGACCAGGTGATTCGTACAATCTTCTCCATC | + |
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Preference number: 1 (lower is better) Translates to: KSSGSERVAATIRAP*AGGLDQVIRTIFSI Trigger: GATGGAGAAGATTGTACGAATCACCTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCACCCTCTCTGACCCGGAGCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR CCA 90 bp | TGGGCTGGGGGATTGGACCAGGTGATTCGTACAATCTTCTCCATCTaGGAAAGGACCCGCAGGACGCTGTCAGACTCTTTTCCGACCACG | + |
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Preference number: 1 (lower is better) Translates to: WAGGLDQVIRTIFSI*ERTRRTLSDSFPTT Trigger: CGTGGTCGGAAAAGAGTCTGACAGCGTCCTGCGGGTCCTTTCCCAGATGGAGAAGATTGTACGAATCACCTGGTCCAATCCCCCAGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR TCA 90 bp | GCCCCAGCCAACACCCACAGTCACATCCGGCTCCTCAGACCAACTTaGTCTTTGAGACTAGACTTTTGTACAGTCAGGCAACACGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: APANTHSHIRLLRPT*SLRLDFCTVRQHAE Trigger: TTCTGCGTGTTGCCTGACTGTACAAAAGTCTAGTCTCAAAGATCAAGTTGGTCTGAGGAGCCGGATGTGACTGTGGGTGTTGGCTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCCGGGTCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTTGGGCTGGGGGACAATCTTCTCCATCTaGGAAAGGACCCGCAGGACG | + |
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Preference number: 2 (lower is better) Translates to: ELRVREGGGHNPSSLGWGTIFSI*ERTRRT Trigger: CGTCCTGCGGGTCCTTTCCCAGATGGAGAAGATTGT...CCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCACCCTCTCTGACCCGGAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR CAA 90 bp | TCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTTGGGCTGGGGGATaGGACCAGGTGATTCGTACAATCTTCTCCATCTGGGAAAGGACC | + |
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Preference number: 2 (lower is better) Translates to: SERVAATIRAPWAGG*DQVIRTIFSIWERT Trigger: GGTCCTTTCCCAGATGGAGAAGATTGTACGAATCACCTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCACCCTCTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR CAA 90 bp | AAAGAGCTCCGGGTCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTaGGGCTGGGGGATTGGACCAGGTGATTCGTACAATCTTCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: KELRVREGGGHNPSS*GWGIGPGDSYNLLH Trigger: ATGGAGAAGATTGTACGAATCACCTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCACCCTCTCTGACCCGGAGCTCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR-3UTR TCA 90 bp | GCGGCCACAATCCGAGCTCCTTGGGCTGGGGGATTGGACCAGGTGATTCGTACACAGGCAGGAAAGGTGTaGCAAGAACTGCTTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: AATIRAPWAGGLDQVIRTQAGKV*QELLWW Trigger: CCACCAAAGCAGTTCTTGTCACACCTTTCCTGCCTG...TGTACGAATCACCTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTTGGGCTGGGGGATTGGACCACAAGAACTGCTTTGGTaGCGTGAACTACGAGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: VREGGGHNPSSLGWGIGPQELLW*RELRGV Trigger: AACACCTCGTAGTTCACGCCACCAAAGCAGTTCTTG...TGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCACCCTCTCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAGACTTTTGTACAGTCAGGCAACACGCAGAAGCCCAAGGCTCCGTGGGCATGCGGGGAGATCAGGGTaGCGAGAGACAGAGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: TRLLYSQATRRSPRLRGHAGRSG*RETEMG Trigger: ACCCATCTCTGTCTCTCGTCACCCTGATCTCCCCGC...ATGCCCACGGAGCCTTGGGCTTCTGCGTGTTGCCTGACTGTACAAAAGTCTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| 3UTR-3UTR TCA 90 bp | CACTCCTTAAAGAGCTCCGGGTCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTGGGGATTGGACCAGGTaGTTCGTACAATCTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: HSLKSSGSERVAATIRAPGDWTR*FVQSSP Trigger: TGGAGAAGATTGTACGAATCACCTGGTCCAATCCCC...AGGAGCTCGGATTGTGGCCGCCACCCTCTCTGACCCGGAGCTCTTTAAGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCAAGGCTCCGTGGGCATCACTCCTGCAGAATGCTAGAGAGGAAGGCAAGGCTCCTCAGACCAACTTaGTCTTTGAGACTAGACTTT | + |
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Preference number: 2 (lower is better) Translates to: SPRLRGHHSCRMLERKARLLRPT*SLRLDF Trigger: AAAGTCTAGTCTCAAAGATCAAGTTGGTCTGAGGAG...CCTTGCCTTCCTCTCTAGCATTCTGCAGGAGTGATGCCCACGGAGCCTTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTCCGTGGGCATCACTCCTGCAGAATGCTAGAGAGGAAGGCAAGGTGATTCTTCTAGTCTTGCCCTaGGTTCGGATCTCATGGTCA | + |
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Preference number: 2 (lower is better) Translates to: KAPWASLLQNAREEGKVILLVLP*VRISWS Trigger: TGACCATGAGATCCGAACTCAGGGCAAGACTAGAAG...AATCACCTTGCCTTCCTCTCTAGCATTCTGCAGGAGTGATGCCCACGGAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTAATAAAGGACGTGTACAGCTAGGTACAGCTAGGTTTGCGCAGGCAGGAACAATCCGAGCTCCTTaGGCTGGGGGATTGGACCAG | + |
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Preference number: 2 (lower is better) Translates to: ISNKGRVQLGTARFAQAGTIRAP*AGGLDQ Trigger: CTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGT...TCCTGCCTGCGCAAACCTAGCTGTACCTAGCTGTACACGTCCTTTATTAGAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAGACTTTTGTACAGTCAGGCAACACGCAGAAGCCCAAGGCTCCGTGGGCATAGGTGTGACAAGAACTaGTTTGGTGGCGTGAACTAC | + |
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Preference number: 2 (lower is better) Translates to: TRLLYSQATRRSPRLRGHRCDKN*FGGVNY Trigger: GTAGTTCACGCCACCAAAGCAGTTCTTGTCACACCT...ATGCCCACGGAGCCTTGGGCTTCTGCGTGTTGCCTGACTGTACAAAAGTCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
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| 3UTR-3UTR GCA 90 bp | GCCGCACATGTTGATCCGACCACTCGGCAGGAGATAGATATGCTTCTCGTTGACAGGTGTGACAAGAACTaGTTTGGTGGCGTGAACTAC | + |
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Preference number: 2 (lower is better) Translates to: AAHVDPTTRQEIDMLLVDRCDKN*FGGVNY Trigger: GTAGTTCACGCCACCAAAGCAGTTCTTGTCACACCT...GTCAACGAGAAGCATATCTATCTCCTGCCGAGTGGTCGGATCAACATGTGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCACTCCTGCAGAATGCTAGAGAGGAAGGCAAGGTGATTACATCTCATAGCCAGGCAGGAAAGGTGTaGCAAGAACTGCTTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: ASLLQNAREEGKVITSHSQAGKV*QELLWW Trigger: CCACCAAAGCAGTTCTTGTCACACCTTTCCTGCCTG...GCTATGAGATGTAATCACCTTGCCTTCCTCTCTAGCATTCTGCAGGAGTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCCAAGGCTCCGTGGGCATCACTCCTGCAGAATGCTAGAGAGGAAGGCAAGGAACTTTAATCTACTCTaGTTTCCAACAGGCTCTAAC | + |
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Preference number: 2 (lower is better) Translates to: SPRLRGHHSCRMLERKARNFNLL*FPTGSN Trigger: GTTAGAGCCTGTTGGAAACCAGAGTAGATTAAAGTT...CCTTGCCTTCCTCTCTAGCATTCTGCAGGAGTGATGCCCACGGAGCCTTGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTAATAAAGGACGTGTACAGCTAGGTACAGCTAGGTTTGCGCAGGCAGGAACTGCTTTGGTGGCGTaGACTACGAGGTGTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ISNKGRVQLGTARFAQAGTALVA*TTRCFF Trigger: GAAGAAACACCTCGTAGTTCACGCCACCAAAGCAGT...TCCTGCCTGCGCAAACCTAGCTGTACCTAGCTGTACACGTCCTTTATTAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR-3UTR CCA 90 bp | CAGACTAAGAAAATATCACAATGTGCCACATATCACAAGAGCAAATACCGTTTACAAGAACTGCTTTGGTaGCGTGAACTACGAGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: QTKKISQCATYHKSKYRLQELLW*RELRGV Trigger: AACACCTCGTAGTTCACGCCACCAAAGCAGTTCTTG...TAAACGGTATTTGCTCTTGTGATATGTGGCACATTGTGATATTTTCTTAGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| 3UTR-3UTR CCA 90 bp | CAGACTAAGAAAATATCACAATGTGCCACATATCACAAGAGCAAATACCGTTTAAACTTTAATCTACTCTaGTTTCCAACAGGCTCTAAC | + |
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Preference number: 2 (lower is better) Translates to: QTKKISQCATYHKSKYRLNFNLL*FPTGSN Trigger: GTTAGAGCCTGTTGGAAACCAGAGTAGATTAAAGTT...TAAACGGTATTTGCTCTTGTGATATGTGGCACATTGTGATATTTTCTTAGTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| 3UTR CCA 72 bp | GGGTCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTTaGGCTGGGGGATTGGACCAGGTGATTCGTACAATC | + |
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Preference number: 3 (lower is better) Translates to: GSERVAATIRAP*AGGLDQVIRTI Trigger: GATTGTACGAATCACCTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCACCCTCTCTGACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR TCA 72 bp | CCAGACCAGGGACACAACCGTGCGGGGAGATCAGGGTaGCGAGAGACAGAGATGGGTGGCGATGATGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: PDQGHNRAGRSG*RETEMGGDDEF Trigger: AAACTCATCATCGCCACCCATCTCTGTCTCTCGTCACCCTGATCTCCCCGCACGGTTGTGTCCCTGGTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| 3UTR CCA 72 bp | AGAGAGGGTGGCGGCCACAATCCGAGCTCCTTGGGCTaGGGGATTGGACCAGGTGATTCGTACAATCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: REGGGHNPSSLG*GIGPGDSYNLL Trigger: GAGAAGATTGTACGAATCACCTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCACCCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAAGGTGTGACAAGAACTGCTTTGGTGGCGTGAACTACGAGGTGTTTCTTCACAATCCGAGCTCCTaGGGCTGGGGGATTGGACCA | + |
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Preference number: 3 (lower is better) Translates to: QERCDKNCFGGVNYEVFLHNPSS*GWGIGP Trigger: TGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTG...AAGAAACACCTCGTAGTTCACGCCACCAAAGCAGTTCTTGTCACACCTTTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR TCA 72 bp | CCGGTGAAACTGAACATTCCAATCTGCTCAGTGATGTaGGACCAAGTCCCGGGGGTCTTGAGAGCTTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: PVKLNIPICSVM*DQVPGVLRASS Trigger: ACTAGAAGCTCTCAAGACCCCCGGGACTTGGTCTCACATCACTGAGCAGATTGGAATGTTCAGTTTCACCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR GCA 72 bp | CTAGGTTTGCGCAGGCAGGAAAGGTGTGACAAGAACTaGTTTGGTGGCGTGAACTACGAGGTGTTTCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: LGLRRQERCDKN*FGGVNYEVFLH Trigger: GTGAAGAAACACCTCGTAGTTCACGCCACCAAAGCAGTTCTTGTCACACCTTTCCTGCCTGCGCAAACCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR CCA 72 bp | GGATTGGACCAGGTGATTCGTACAATCTTCTCCATCTaGGAAAGGACCCGCAGGACGCTGTCAGACTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: GLDQVIRTIFSI*ERTRRTLSDSF Trigger: AAAAGAGTCTGACAGCGTCCTGCGGGTCCTTTCCCAGATGGAGAAGATTGTACGAATCACCTGGTCCAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR TCA 72 bp | CGTAATCTAGGTTCTTGGTGGTCAAGCCGCACATGTTaGTCCGACCACTCGGCAGGAGATAGATATGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: RNLGSWWSSRTC*SDHSAGDRYAS Trigger: AGAAGCATATCTATCTCCTGCCGAGTGGTCGGATCAACATGTGCGGCTTGACCACCAAGAACCTAGATTACG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| 3UTR TCA 72 bp | AACACCCACAGTCACATCCGGCTCCTCAGACCAACTTaGTCTTTGAGACTAGACTTTTGTACAGTCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: NTHSHIRLLRPT*SLRLDFCTVRQ Trigger: TTGCCTGACTGTACAAAAGTCTAGTCTCAAAGATCAAGTTGGTCTGAGGAGCCGGATGTGACTGTGGGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
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| 3UTR TCA 72 bp | CATCACTCCTGCAGAATGCTAGAGAGGAAGGCAAGGTaGTTACATCTCATAGCCAAAGTTCTTTTTATTCTT | + |
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Preference number: 3 (lower is better) Translates to: HHSCRMLERKAR*LHLIAKVLFIL Trigger: AAGAATAAAAAGAACTTTGGCTATGAGATGTAATCACCTTGCCTTCCTCTCTAGCATTCTGCAGGAGTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
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| 3UTR-3UTR CAA 90 bp | CAGACTAAGAAAATATCACAATGTGCCACATATCACAAGAGCAAATACCGTTTATTTGAGACTAGACTTTaGTACAGTCAGGCAACACGC | + |
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Preference number: 3 (lower is better) Translates to: QTKKISQCATYHKSKYRLFETRL*YSQATR Trigger: GCGTGTTGCCTGACTGTACAAAAGTCTAGTCTCAAA...TAAACGGTATTTGCTCTTGTGATATGTGGCACATTGTGATATTTTCTTAGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| 3UTR CAA 72 bp | CGGGTCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTaGGGCTGGGGGATTGGACCAGGTGATTCGTACAAT | + |
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Preference number: 4 (lower is better) Translates to: RVREGGGHNPSS*GWGIGPGDSYN Trigger: ATTGTACGAATCACCTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCACCCTCTCTGACCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| CDS-3UTR TCA 90 bp | GACACAACCGTGCGGGGAGATCAGGGTGACGAGAGACAGAGATGGGTGGCGATGTCAAGCCGCACATGTTaGTCCGACCACTCGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: DTTVRGDQGDERQRWVAMSSRTC*SDHSAG Trigger: TCCTGCCGAGTGGTCGGATCAACATGTGCGGCTTGA...CATCGCCACCCATCTCTGTCTCTCGTCACCCTGATCTCCCCGCACGGTTGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| CDS-3UTR GCA 90 bp | CACTCCTTAAAGAGCTCCGGGTCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTGTCCCTGTTGGGTTGTaGGCACAGGCATGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: HSLKSSGSERVAATIRAPVPVGL*AQAWRT Trigger: TGTCCTCCATGCCTGTGCGCACAACCCAACAGGGAC...AGGAGCTCGGATTGTGGCCGCCACCCTCTCTGACCCGGAGCTCTTTAAGGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| CDS-3UTR CCA 90 bp | AGCCCAAGGCTCCGTGGGCATCACTCCTGCAGAATGCTAGAGAGGAAGGCAAGGCTGCTTCCACTGCTCTaGAGTCGGGTCGGTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SPRLRGHHSCRMLERKARLLPLL*SRVGPC Trigger: ACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAG...CCTTGCCTTCCTCTCTAGCATTCTGCAGGAGTGATGCCCACGGAGCCTTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
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| CDS-3UTR CCA 90 bp | GCAACACGCAGAAGCCCAAGGCTCCGTGGGCATCACTCCTGCAGAATGCTAGAGAACCTTGCGGGGATCTaGATCATCCCGGAAGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: ATRRSPRLRGHHSCRMLENLAGI*IIPEVR Trigger: GCGGACTTCCGGGATGATCCAGATCCCCGCAAGGTT...CTCTAGCATTCTGCAGGAGTGATGCCCACGGAGCCTTGGGCTTCTGCGTGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| CDS-3UTR CCA 90 bp | GTCAGAGAGGGTGGCGGCCACAATCCGAGCTCCTTGGGCTGGGGGATTGGACCATTGTGCGCACAGGCATaGAGGACAAAGATGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: VREGGGHNPSSLGWGIGPLCAQA*RTKMEN Trigger: GTTCTCCATCTTTGTCCTCCATGCCTGTGCGCACAA...TGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCACCCTCTCTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| CDS-3UTR CCA 90 bp | AGCCCAAGGCTCCGTGGGCATCACTCCTGCAGAATGCTAGAGAGGAAGGCAAGGACAATCCGAGCTCCTTaGGCTGGGGGATTGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: SPRLRGHHSCRMLERKARTIRAP*AGGLDQ Trigger: CTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGT...CCTTGCCTTCCTCTCTAGCATTCTGCAGGAGTGATGCCCACGGAGCCTTGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| CDS-3UTR TCA 90 bp | TGTTCCAGACCAGGGACACAACCGTGCGGGGAGATCAGGGTGACGAGAGACAGAGGCAAAACCCAGGGCTaGGATTCATCTGTGCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: CSRPGTQPCGEIRVTRDRGKTQG*DSSVRY Trigger: GTACCGCACAGATGAATCTCAGCCCTGGGTTTTGCC...TCTGTCTCTCGTCACCCTGATCTCCCCGCACGGTTGTGTCCCTGGTCTGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| 3UTR CAA 72 bp | GTGGCGGCCACAATCCGAGCTCCTTGGGCTGGGGGATaGGACCAGGTGATTCGTACAATCTTCTCCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: VAATIRAPWAGG*DQVIRTIFSIW Trigger: CCAGATGGAGAAGATTGTACGAATCACCTGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTGGCCGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| CDS-3UTR TCA 90 bp | GACACAACCGTGCGGGGAGATCAGGGTGACGAGAGACAGAGATGGGTGGCGATGCTTCTAGTCTTGCCCTaGGTTCGGATCTCATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DTTVRGDQGDERQRWVAMLLVLP*VRISWS Trigger: TGACCATGAGATCCGAACTCAGGGCAAGACTAGAAG...CATCGCCACCCATCTCTGTCTCTCGTCACCCTGATCTCCCCGCACGGTTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| CDS-3UTR GCA 90 bp | TCTAGTCTTGCCCTGAGTTCGGATCTCATGGTCAGAATCCGGTCAGCCATTGTCACAGCTCCGGAACTCTaGCAGGCCCAGGATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSLALSSDLMVRIRSAIVTAPEL*QAQDGQ Trigger: CTGCCCATCCTGGGCCTGGCAGAGTTCCGGAGCTGT...GACAATGGCTGACCGGATTCTGACCATGAGATCCGAACTCAGGGCAAGACTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
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| CDS-3UTR GCA 90 bp | ATCTCTAATAAAGGACGTGTACAGCTAGGTACAGCTAGGTTTGCGCAGGCAGGAACAGCTCCGGAACTCTaGCAGGCCCAGGATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ISNKGRVQLGTARFAQAGTAPEL*QAQDGQ Trigger: CTGCCCATCCTGGGCCTGGCAGAGTTCCGGAGCTGT...TCCTGCCTGCGCAAACCTAGCTGTACCTAGCTGTACACGTCCTTTATTAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
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| CDS-3UTR GCA 90 bp | CGGGGAGATCAGGGTGACGAGAGACAGAGATGGGTGGCGATGATGAGTTTTAATGTCCCTGTTGGGTTGTaGGCACAGGCATGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: RGDQGDERQRWVAMMSFNVPVGL*AQAWRT Trigger: TGTCCTCCATGCCTGTGCGCACAACCCAACAGGGAC...ATTAAAACTCATCATCGCCACCCATCTCTGTCTCTCGTCACCCTGATCTCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| CDS-3UTR GCA 90 bp | CAACACCCACAGTCACATCCGGCTCCTCAGACCAACTTGATCTTTGAGACTAGAGCGATCTGCTTCCACTaGTCTGGAGTCGGGTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: QHPQSHPAPQTNLIFETRAICFH*SGVGSV Trigger: GACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGC...TCTAGTCTCAAAGATCAAGTTGGTCTGAGGAGCCGGATGTGACTGTGGGTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
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| CDS-3UTR GCA 90 bp | AGAGCTTCTAGTCTTGCCCTGAGTTCGGATCTCATGGTCAGAATCCGGTCAGCCATGACAGCAGCGATCTaGTTCCACTGCTCTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RASSLALSSDLMVRIRSAMTAAI*FHCSGV Trigger: GACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCAT...GGCTGACCGGATTCTGACCATGAGATCCGAACTCAGGGCAAGACTAGAAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
||
| CDS-3UTR CCA 90 bp | GCATCACTCCTGCAGAATGCTAGAGAGGAAGGCAAGGTGATTACATCTCATAGCCTGCTTCCACTGCTCTaGAGTCGGGTCGGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLLQNAREEGKVITSHSLLPLL*SRVGPC Trigger: ACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAG...GCTATGAGATGTAATCACCTTGCCTTCCTCTCTAGCATTCTGCAGGAGTGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS-3UTR CCA 90 bp | ACTAGACTTTTGTACAGTCAGGCAACACGCAGAAGCCCAAGGCTCCGTGGGCATAGAGCCCGAAGTTCTTaGAGAAGGACTGGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRLLYSQATRRSPRLRGHRARSS*RRTGHR Trigger: TCTGTGCCCAGTCCTTCTCCAAGAACTTCGGGCTCT...ATGCCCACGGAGCCTTGGGCTTCTGCGTGTTGCCTGACTGTACAAAAGTCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS-3UTR CCA 90 bp | AAGGCTCCGTGGGCATCACTCCTGCAGAATGCTAGAGAGGAAGGCAAGGTGATTTTGTGCGCACAGGCATaGAGGACAAAGATGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KAPWASLLQNAREEGKVILCAQA*RTKMEN Trigger: GTTCTCCATCTTTGTCCTCCATGCCTGTGCGCACAA...AATCACCTTGCCTTCCTCTCTAGCATTCTGCAGGAGTGATGCCCACGGAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS-3UTR CCA 90 bp | CGGGGAGATCAGGGTGACGAGAGACAGAGATGGGTGGCGATGATGAGTTTTAATACAATCTTCTCCATCTaGGAAAGGACCCGCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: RGDQGDERQRWVAMMSFNTIFSI*ERTRRT Trigger: CGTCCTGCGGGTCCTTTCCCAGATGGAGAAGATTGT...ATTAAAACTCATCATCGCCACCCATCTCTGTCTCTCGTCACCCTGATCTCCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS-3UTR TCA 90 bp | ATCTCTAATAAAGGACGTGTACAGCTAGGTACAGCTAGGTTTGCGCAGGCAGGAGGCAAAACCCAGGGCTaGGATTCATCTGTGCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ISNKGRVQLGTARFAQAGGKTQG*DSSVRY Trigger: GTACCGCACAGATGAATCTCAGCCCTGGGTTTTGCC...TCCTGCCTGCGCAAACCTAGCTGTACCTAGCTGTACACGTCCTTTATTAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGACTAGACTTTTGTACAGTCAGGCAACACGCAGAAGCCCAAGGCTCCGTGTTCTTGGAGAAGGACTaGGCACAGAAGAGCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRLDFCTVRQHAEAQGSVFLEKD*AQKSSK Trigger: CTTCGAGCTCTTCTGTGCCCAGTCCTTCTCCAAGAA...CACGGAGCCTTGGGCTTCTGCGTGTTGCCTGACTGTACAAAAGTCTAGTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS-3UTR TCA 90 bp | ATCTCTAATAAAGGACGTGTACAGCTAGGTACAGCTAGGTTTGCGCAGGCAGGAACTCTCTCATCTGCATaGCAGCAGCGATCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISNKGRVQLGTARFAQAGTLSSA*QQRSAS Trigger: GGAAGCAGATCGCTGCTGTCATGCAGATGAGAGAGT...TCCTGCCTGCGCAAACCTAGCTGTACCTAGCTGTACACGTCCTTTATTAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCAGAATGCTAGAGAGGAAGGCAAGGTGATTACATCTCATAGCCAAAGTATGACAGCAGCGATCTaGTTCCACTGCTCTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQNAREEGKVITSHSQSMTAAI*FHCSGV Trigger: GACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCAT...ACTTTGGCTATGAGATGTAATCACCTTGCCTTCCTCTCTAGCATTCTGCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS-3UTR TCA 90 bp | CAGACTAAGAAAATATCACAATGTGCCACATATCACAAGAGCAAATACCGTTTAGGGGATTGGACCAGGTaGTTCGTACAATCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTKKISQCATYHKSKYRLGDWTR*FVQSSP Trigger: TGGAGAAGATTGTACGAATCACCTGGTCCAATCCCC...TAAACGGTATTTGCTCTTGTGATATGTGGCACATTGTGATATTTTCTTAGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS-3UTR TCA 90 bp | CAGACTAAGAAAATATCACAATGTGCCACATATCACAAGAGCAAATACCGTTTAAGATATGCTTCTCGTTaGCCAAATACTCGACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTKKISQCATYHKSKYRLRYASR*PNTRPA Trigger: AGCAGGTCGAGTATTTGGTCAACGAGAAGCATATCT...TAAACGGTATTTGCTCTTGTGATATGTGGCACATTGTGATATTTTCTTAGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS GCA 90 bp | GGGAACAGAAAACGGCGCTGCATGACAGCAGCGATCTGCTTCCACTaGTCTGGAGTCGGGTCGGTCCCTGTTGGGTTGTGCGCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GNRKRRCMTAAICFH*SGVGSVPVGLCAQA Trigger: TGCCTGTGCGCACAACCCAACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCATGCAGCGCCGTTTTCTGTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS CCA 90 bp | CAGAAAACGGCGCTGCATGACAGCAGCGATCTGCTTCCACTGCTCTaGAGTCGGGTCGGTCCCTGTTGGGTTGTGCGCACAGGCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QKTALHDSSDLLPLL*SRVGPCWVVRTGME Trigger: CTCCATGCCTGTGCGCACAACCCAACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCATGCAGCGCCGTTTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS CCA 90 bp | CCACTCTCTCATCTGCATGACAGCAGCGATCTGCTTCCACTGCTCTaGAGTCGGGTCGGTCCCTGTTGGGTTGTGCGCACAGGCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLSHLHDSSDLLPLL*SRVGPCWVVRTGME Trigger: CTCCATGCCTGTGCGCACAACCCAACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCATGCAGATGAGAGAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
||
| CDS GCA 90 bp | ATTCCCCACTCTCTCATCTGCATGACAGCAGCGATCTGCTTCCACTaGTCTGGAGTCGGGTCGGTCCCTGTTGGGTTGTGCGCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IPHSLICMTAAICFH*SGVGSVPVGLCAQA Trigger: TGCCTGTGCGCACAACCCAACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCATGCAGATGAGAGAGTGGGGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
||
| CDS CCA 90 bp | ATCTGTGCGGTACGCTCCCACGCCGAGGTTAACCTTGCGGGGATCTaGATCATCCCGGAAGTCCGCAGTGAGCTTAAAGACCAGAACCGG | + |
|
Preference number: 5 (lower is better) Translates to: ICAVRSHAEVNLAGI*IIPEVRSELKDQNR Trigger: CCGGTTCTGGTCTTTAAGCTCACTGCGGACTTCCGGGATGATCCAGATCCCCGCAAGGTTAACCTCGGCGTGGGAGCGTACCGCACAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS GCA 90 bp | AAGAAGTCAGCTCCAATCCGAAGAGCGCCTGTCCCTCCCAAAGACTaGACCCCTCCAACCCGATTCTCCCTGATAGCCAGGCTGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKSAPIRRAPVPPKD*TPPTRFSLIARLLS Trigger: GGACAACAGCCTGGCTATCAGGGAGAATCGGGTTGGAGGGGTGCAGTCTTTGGGAGGGACAGGCGCTCTTCGGATTGGAGCTGACTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS CCA 90 bp | TGCTCTGGAGTCGGGTCGGTCCCTGTTGGGTTGTGCGCACAGGCATaGAGGACAAAGATGGAGAACTCGGGGGCATTCTCCAGATCATTC | + |
|
Preference number: 5 (lower is better) Translates to: CSGVGSVPVGLCAQA*RTKMENSGAFSRSF Trigger: GAATGATCTGGAGAATGCCCCCGAGTTCTCCATCTTTGTCCTCCATGCCTGTGCGCACAACCCAACAGGGACCGACCCGACTCCAGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS-3UTR CAA 90 bp | ATAACTTTAATCTACTCTGGTTTCCAACAGGCTCTAACCCCAGAGCCCCCGGGGTCGGTCCCTGTTGGGTaGTGCGCACAGGCATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ITLIYSGFQQALTPEPPGSVPVG*CAQAWR Trigger: CCTCCATGCCTGTGCGCACAACCCAACAGGGACCGA...CCCCGGGGGCTCTGGGGTTAGAGCCTGTTGGAAACCAGAGTAGATTAAAGTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS-3UTR CAA 90 bp | CGGTCAGCCATTGTCTTCACGTTACCTTTCCACTCCTTAAAGAGCTCCGGGTCATCGGTCCCTGTTGGGTaGTGCGCACAGGCATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSAIVFTLPFHSLKSSGSSVPVG*CAQAWR Trigger: CCTCCATGCCTGTGCGCACAACCCAACAGGGACCGA...TGACCCGGAGCTCTTTAAGGAGTGGAAAGGTAACGTGAAGACAATGGCTGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCTCCGTGGGCATCACTCCTGCAGAATGCTAGAGAGGAAGGCAAGGTGATTGTCAAGCCGCACATGTaGATCCGACCACTCGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KAPWASLLQNAREEGKVIVKPHM*IRPLGR Trigger: CCTGCCGAGTGGTCGGATCAACATGTGCGGCTTGAC...AATCACCTTGCCTTCCTCTCTAGCATTCTGCAGGAGTGATGCCCACGGAGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS-3UTR CAA 90 bp | TGTTCCAGACCAGGGACACAACCGTGCGGGGAGATCAGGGTGACGAGAGACAGAGAATCCGGTCAGCCATaGTCTTCACGTTACCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSRPGTQPCGEIRVTRDRESGQP*SSRYLS Trigger: GGAAAGGTAACGTGAAGACAATGGCTGACCGGATTC...TCTGTCTCTCGTCACCCTGATCTCCCCGCACGGTTGTGTCCCTGGTCTGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS TCA 90 bp | GCAATCTTCTGTTCGACCTTCCTCACTACTGGCAAAACCCAGGGCTaGGATTCATCTGTGCGGTACGCTCCCACGCCGAGGTTAACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AIFCSTFLTTGKTQG*DSSVRYAPTPRLTL Trigger: CAAGGTTAACCTCGGCGTGGGAGCGTACCGCACAGATGAATCTCAGCCCTGGGTTTTGCCAGTAGTGAGGAAGGTCGAACAGAAGATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS-3UTR CAA 90 bp | TTGAGACTAGACTTTTGTACAGTCAGGCAACACGCAGAAGCCCAAGGCTCCGTGCTGATAGCCAGGCTGTaGTCCCCAAGAACTAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LRLDFCTVRQHAEAQGSVLIARL*SPRTRR Trigger: TCGCCTAGTTCTTGGGGACAACAGCCTGGCTATCAG...CACGGAGCCTTGGGCTTCTGCGTGTTGCCTGACTGTACAAAAGTCTAGTCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGTCTTGCCCTGAGTTCGGATCTCATGGTCAGAATCCGGTCAGCCATTGTCCTGATAGCCAGGCTGTaGTCCCCAAGAACTAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLALSSDLMVRIRSAIVLIARL*SPRTRR Trigger: TCGCCTAGTTCTTGGGGACAACAGCCTGGCTATCAG...GACAATGGCTGACCGGATTCTGACCATGAGATCCGAACTCAGGGCAAGACTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
||
| CDS-3UTR CAA 90 bp | GACACAACCGTGCGGGGAGATCAGGGTGACGAGAGACAGAGATGGGTGGCGATGGTGATGATACGTAGATaGGTGTGTTCTTGTTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: DTTVRGDQGDERQRWVAMVMIRR*VCSCYL Trigger: CAGATAACAAGAACACACCAATCTACGTATCATCAC...CATCGCCACCCATCTCTGTCTCTCGTCACCCTGATCTCCCCGCACGGTTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
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| CDS-3UTR CAA 90 bp | CTCCTGCAGAATGCTAGAGAGGAAGGCAAGGTGATTACATCTCATAGCCAAAGTCACAATCCGAGCTCCTaGGGCTGGGGGATTGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: LLQNAREEGKVITSHSQSHNPSS*GWGIGP Trigger: TGGTCCAATCCCCCAGCCCAAGGAGCTCGGATTGTG...ACTTTGGCTATGAGATGTAATCACCTTGCCTTCCTCTCTAGCATTCTGCAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS-3UTR CAA 90 bp | ATAACTTTAATCTACTCTGGTTTCCAACAGGCTCTAACCCCAGAGCCCCCGGGGTCGTGGTTGAGGCTGTaGTCGTTAGCAATCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ITLIYSGFQQALTPEPPGSWLRL*SLAIFC Trigger: ACAGAAGATTGCTAACGACAACAGCCTCAACCACGA...CCCCGGGGGCTCTGGGGTTAGAGCCTGTTGGAAACCAGAGTAGATTAAAGTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS-3UTR CAA 90 bp | CGGTCAGCCATTGTCTTCACGTTACCTTTCCACTCCTTAAAGAGCTCCGGGTCATCGTGGTTGAGGCTGTaGTCGTTAGCAATCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSAIVFTLPFHSLKSSGSSWLRL*SLAIFC Trigger: ACAGAAGATTGCTAACGACAACAGCCTCAACCACGA...TGACCCGGAGCTCTTTAAGGAGTGGAAAGGTAACGTGAAGACAATGGCTGACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
||
| CDS CCA 72 bp | GCGCTGCATGACAGCAGCGATCTGCTTCCACTGCTCTaGAGTCGGGTCGGTCCCTGTTGGGTTGTGCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: ALHDSSDLLPLL*SRVGPCWVVRT Trigger: TGTGCGCACAACCCAACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCATGCAGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS GCA 72 bp | AAACGGCGCTGCATGACAGCAGCGATCTGCTTCCACTaGTCTGGAGTCGGGTCGGTCCCTGTTGGGTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KRRCMTAAICFH*SGVGSVPVGLC Trigger: GCACAACCCAACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCATGCAGCGCCGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS CCA 72 bp | GTCGGGTCGGTCCCTGTTGGGTTGTGCGCACAGGCATaGAGGACAAAGATGGAGAACTCGGGGGCATTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VGSVPVGLCAQA*RTKMENSGAFS Trigger: GGAGAATGCCCCCGAGTTCTCCATCTTTGTCCTCCATGCCTGTGCGCACAACCCAACAGGGACCGACCCGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS CAA 90 bp | CAGCAGCGATCTGCTTCCACTGCTCTGGAGTCGGGTCGGTCCCTGTaGGGTTGTGCGCACAGGCATGGAGGACAAAGATGGAGAACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: QQRSASTALESGRSL*GCAHRHGGQRWRTR Trigger: CCGAGTTCTCCATCTTTGTCCTCCATGCCTGTGCGCACAACCCAACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS GCA 72 bp | GGGAACAGAAAACGGCGCTGCATGACAGCAGCGATCTaGTTCCACTGCTCTGGAGTCGGGTCGGTCCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GNRKRRCMTAAI*FHCSGVGSVPV Trigger: AACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCATGCAGCGCCGTTTTCTGTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS CCA 72 bp | CATCTGCATGACAGCAGCGATCTGCTTCCACTGCTCTaGAGTCGGGTCGGTCCCTGTTGGGTTGTGCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: HLHDSSDLLPLL*SRVGPCWVVRT Trigger: TGTGCGCACAACCCAACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCATGCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
||
| CDS CAA 72 bp | ACCCCTCCAACCCGATTCTCCCTGATAGCCAGGCTGTaGTCCCCAAGAACTAGGCGAGAAGCACAGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TPPTRFSLIARL*SPRTRREAQLR Trigger: CCGGAGCTGTGCTTCTCGCCTAGTTCTTGGGGACAACAGCCTGGCTATCAGGGAGAATCGGGTTGGAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS CAA 90 bp | AAAGACTGCACCCCTCCAACCCGATTCTCCCTGATAGCCAGGCTGTaGTCCCCAAGAACTAGGCGAGAAGCACAGCTCCGGAACTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KDCTPPTRFSLIARL*SPRTRREAQLRNSA Trigger: GGCAGAGTTCCGGAGCTGTGCTTCTCGCCTAGTTCTTGGGGACAACAGCCTGGCTATCAGGGAGAATCGGGTTGGAGGGGTGCAGTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS TCA 72 bp | TGTTCGACCTTCCTCACTACTGGCAAAACCCAGGGCTaGGATTCATCTGTGCGGTACGCTCCCACGCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSTFLTTGKTQG*DSSVRYAPTPR Trigger: CCTCGGCGTGGGAGCGTACCGCACAGATGAATCTCAGCCCTGGGTTTTGCCAGTAGTGAGGAAGGTCGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS GCA 72 bp | TCTCTCATCTGCATGACAGCAGCGATCTGCTTCCACTaGTCTGGAGTCGGGTCGGTCCCTGTTGGGTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLICMTAAICFH*SGVGSVPVGLC Trigger: GCACAACCCAACAGGGACCGACCCGACTCCAGAGCAGTGGAAGCAGATCGCTGCTGTCATGCAGATGAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133325.8 |
||
| CDS CCA 72 bp | GTACGCTCCCACGCCGAGGTTAACCTTGCGGGGATCTaGATCATCCCGGAAGTCCGCAGTGAGCTTAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VRSHAEVNLAGI*IIPEVRSELKD Trigger: GTCTTTAAGCTCACTGCGGACTTCCGGGATGATCCAGATCCCCGCAAGGTTAACCTCGGCGTGGGAGCGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026196.14 |
||
| CDS CAA 72 bp | CGGCGGCAGAAAACACAGCATTATGGTTCTCCCAGGTaGGTGATGATACGTAGATTGGTGTGTTCTTGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: RRQKTQHYGSPR*VMIRRLVCSCY Trigger: ATAACAAGAACACACCAATCTACGTATCATCACCAACCTGGGAGAACCATAATGCTGTGTTTTCTGCCGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS CAA 90 bp | AAAACACAGCATTATGGTTCTCCCAGGTTGGTGATGATACGTAGATaGGTGTGTTCTTGTTATCTGTACCATTGTACCATCGCCCTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: KTQHYGSPRLVMIRR*VCSCYLYHCTIALR Trigger: TCTTAGGGCGATGGTACAATGGTACAGATAACAAGAACACACCAATCTACGTATCATCACCAACCTGGGAGAACCATAATGCTGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
||
| CDS CAA 72 bp | CATTATGGTTCTCCCAGGTTGGTGATGATACGTAGATaGGTGTGTTCTTGTTATCTGTACCATTGTACCATC | + |
|
Preference number: 6 (lower is better) Translates to: HYGSPRLVMIRR*VCSCYLYHCTI Trigger: GATGGTACAATGGTACAGATAACAAGAACACACCAATCTACGTATCATCACCAACCTGGGAGAACCATAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026196.14 ENSMUST00000133325.8 |
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