Pregenerated sensors for GOSR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020946Ensembl transcript IDs: ENSMUST00000021329.14, ENSMUST00000107013.3
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGAATGGAAATTTGAGGGAGGGCAGCCTGGGCAACCAGCTCAATaGCCCTTGAGTCCAGATCCTCTGCGTCCATTCCCTGCCCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: TEWKFEGGQPGQPAQ*PLSPDPLRPFPAPR Trigger: CCTGGGGGCAGGGAATGGACGCAGAGGATCTGGACTCAAGGGGCATTGAGCTGGTTGCCCAGGCTGCCCTCCCTCAAATTTCCATTCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR CCA 90 bp | GACAGTTTGCCCAATCAGGTCAGAGTCATCTCACAAGGCACTGAATaGAAATTTGAGGGAGGGCAGCCTGGGCAACCAGCTCAATGCCCC | + |
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Preference number: 1 (lower is better) Translates to: DSLPNQVRVISQGTE*KFEGGQPGQPAQCP Trigger: GGGGCATTGAGCTGGTTGCCCAGGCTGCCCTCCCTCAAATTTCCATTCAGTGCCTTGTGAGATGACTCTGACCTGATTGGGCAAACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR TCA 90 bp | CCAGCAACCATGGCATGGAAACACTTGCATTATCAGCAGCAGCACTaGTGTCTCTGCTTCCCTGGAGTAGCTGCTTCCAGGAAAGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: PATMAWKHLHYQQQH*CLCFPGVAASRKGC Trigger: GCACCCTTTCCTGGAAGCAGCTACTCCAGGGAAGCAGAGACATCAGTGCTGCTGCTGATAATGCAAGTGTTTCCATGCCATGGTTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR GCA 90 bp | GTTAAGGCATACATTTCAAAAGGGCCTCCCAGCCCACTTCTTGCTTaGACATGCGCACACAATGGGAAGGCTGTCCAGTGCTGGGTACAG | + |
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Preference number: 1 (lower is better) Translates to: VKAYISKGPPSPLLA*TCAHNGKAVQCWVQ Trigger: CTGTACCCAGCACTGGACAGCCTTCCCATTGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGAGGCCCTTTTGAAATGTATGCCTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR GCA 90 bp | CTGGGTGCAGGTGCCAAGCTACCGTCTCTGAACTGTAAGAGCCACTaGCGTATTAACTGGAAAACATTGGTGACTCAGGGCTTCCGTGTC | + |
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Preference number: 1 (lower is better) Translates to: LGAGAKLPSLNCKSH*RINWKTLVTQGFRV Trigger: GACACGGAAGCCCTGAGTCACCAATGTTTTCCAGTTAATACGGCAGTGGCTCTTACAGTTCAGAGACGGTAGCTTGGCACCTGCACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR GCA 90 bp | ACTCAGGCTAGGGGCCCTTCCCTGCTGGAGCCTGTAAGGACAGTTTaGCCAATCAGGTCAGAGTCATCTCACAAGGCACTGAATGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: TQARGPSLLEPVRTV*PIRSESSHKALNGN Trigger: ATTTCCATTCAGTGCCTTGTGAGATGACTCTGACCTGATTGGGCAAACTGTCCTTACAGGCTCCAGCAGGGAAGGGCCCCTAGCCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR CCA 90 bp | ATGGCTCAATTACAGCTTGTACATCTTCCAAAGCATGCTGTCTGGTaGGATCTTCAGGTGCCAGGGGGCACAGGAGTCAGGTCTGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: MAQLQLVHLPKHAVW*DLQVPGGTGVRSVQ Trigger: CTGCACAGACCTGACTCCTGTGCCCCCTGGCACCTGAAGATCCCACCAGACAGCATGCTTTGGAAGATGTACAAGCTGTAATTGAGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR TCA 90 bp | AGAGAACAGGGTCTTGACCCACTTCCTAAGCACCACACGTCTTGGTaGCCCAAGGTCCTACTCCCCAGATGTCACAGAAAACAAAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: REQGLDPLPKHHTSW*PKVLLPRCHRKQSR Trigger: CCTGCTTTGTTTTCTGTGACATCTGGGGAGTAGGACCTTGGGTCACCAAGACGTGTGGTGCTTAGGAAGTGGGTCAAGACCCTGTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR TCA 90 bp | TCAGCTATGTGGACAAACCACAAAACCCAGCCATCCCTCCCCCAATaGAAGCCAGAGAACAGGGTCTTGACCCACTTCCTAAGCACCACA | + |
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Preference number: 1 (lower is better) Translates to: SAMWTNHKTQPSLPQ*KPENRVLTHFLSTT Trigger: TGTGGTGCTTAGGAAGTGGGTCAAGACCCTGTTCTCTGGCTTTCATTGGGGGAGGGATGGCTGGGTTTTGTGGTTTGTCCACATAGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR GCA 90 bp | AGCTTGTACATCTTCCAAAGCATGCTGTCTGGTGGGATCTTCAGGTaGCAGGGGGCACAGGAGTCAGGTCTGTGCAGTACAAACTCTATG | + |
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Preference number: 1 (lower is better) Translates to: SLYIFQSMLSGGIFR*QGAQESGLCSTNSM Trigger: CATAGAGTTTGTACTGCACAGACCTGACTCCTGTGCCCCCTGGCACCTGAAGATCCCACCAGACAGCATGCTTTGGAAGATGTACAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR GCA 90 bp | GCATTATCAGCAGCAGCACTGATGTCTCTGCTTCCCTGGAGTAGCTaGTTCCAGGAAAGGGTGCTGGTGTTAGCAGTTAGTCACCTACAT | + |
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Preference number: 1 (lower is better) Translates to: ALSAAALMSLLPWSS*FQERVLVLAVSHLH Trigger: ATGTAGGTGACTAACTGCTAACACCAGCACCCTTTCCTGGAAGCAGCTACTCCAGGGAAGCAGAGACATCAGTGCTGCTGCTGATAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR CCA 90 bp | GCCAAGCTACCGTCTCTGAACTGTAAGAGCCACTGCCGTATTAACTaGAAAACATTGGTGACTCAGGGCTTCCGTGTCCAGACTGAACAC | + |
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Preference number: 1 (lower is better) Translates to: AKLPSLNCKSHCRIN*KTLVTQGFRVQTEH Trigger: GTGTTCAGTCTGGACACGGAAGCCCTGAGTCACCAATGTTTTCCAGTTAATACGGCAGTGGCTCTTACAGTTCAGAGACGGTAGCTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR TCA 90 bp | AGTGCTGACCTCACCACAAATTCATTCCAAAGGGAGACCTGGCTGTaGAGGTGGAACATCAAGTTCACTAAAGCCAAGGACTGCTACAAA | + |
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Preference number: 1 (lower is better) Translates to: SADLTTNSFQRETWL*RWNIKFTKAKDCYK Trigger: TTTGTAGCAGTCCTTGGCTTTAGTGAACTTGATGTTCCACCTTCACAGCCAGGTCTCCCTTTGGAATGAATTTGTGGTGAGGTCAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR CCA 90 bp | CATGTTTTTCCTACTAGGAGGCTACTAAATTTAGAACTGTTTGGGTaGACAGGGCCTGTGACTGATGAACAAATAAACTCACTAGATCGT | + |
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Preference number: 1 (lower is better) Translates to: HVFPTRRLLNLELFG*TGPVTDEQINSLDR Trigger: ACGATCTAGTGAGTTTATTTGTTCATCAGTCACAGGCCCTGTCCACCCAAACAGTTCTAAATTTAGTAGCCTCCTAGTAGGAAAAACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCATCCCTCCCCCAATGAAAGCCAGAGAACAGGGTCTTGACCCACTTCCTAGCCCACTTCTTGCTTaGACATGCGCACACAATGGG | + |
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Preference number: 2 (lower is better) Translates to: PAIPPPMKAREQGLDPLPSPLLA*TCAHNG Trigger: CCCATTGTGTGCGCATGTGCAAGCAAGAAGTGGGCT...AGGAAGTGGGTCAAGACCCTGTTCTCTGGCTTTCATTGGGGGAGGGATGGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR-3UTR CCA 90 bp | GCACCACACGTCTTGGTGACCCAAGGTCCTACTCCCCAGATGTCACAGAAAACACACATGCGCACACAATaGGAAGGCTGTCCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: APHVLVTQGPTPQMSQKTHMRTQ*EGCPVL Trigger: CAGCACTGGACAGCCTTCCCATTGTGTGCGCATGTG...TGTTTTCTGTGACATCTGGGGAGTAGGACCTTGGGTCACCAAGACGTGTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR CAA 90 bp | TCACAGTTAAGGCATACATTTCAAAAGGGCCTCCCAGCCCACTTCTaGCTTGCACATGCGCACACAATGGGAAGGCTGTCCAGTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SQLRHTFQKGLPAHF*LAHAHTMGRLSSAG Trigger: CCCAGCACTGGACAGCCTTCCCATTGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGAGGCCCTTTTGAAATGTATGCCTTAACTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR-3UTR GCA 90 bp | AGCCTCACCATGCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACAAGCCCACTTCTTGCTTaGACATGCGCACACAATGGG | + |
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Preference number: 2 (lower is better) Translates to: SLTMHAFQGKHQLCGQTTSPLLA*TCAHNG Trigger: CCCATTGTGTGCGCATGTGCAAGCAAGAAGTGGGCT...TGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGCATGGTGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR CAA 90 bp | CCGTCTCTGAACTGTAAGAGCCACTGCCGTATTAACTGGAAAACATaGGTGACTCAGGGCTTCCGTGTCCAGACTGAACACTCCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: PSLNCKSHCRINWKT*VTQGFRVQTEHSLG Trigger: TCCCAGGGAGTGTTCAGTCTGGACACGGAAGCCCTGAGTCACCAATGTTTTCCAGTTAATACGGCAGTGGCTCTTACAGTTCAGAGACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR-3UTR GCA 90 bp | ACCATGCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACAAAACCCTCCCAGCCCACTTCTTaGTTGCACATGCGCACACAA | + |
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Preference number: 2 (lower is better) Translates to: TMHAFQGKHQLCGQTTKPSQPTS*LHMRTQ Trigger: TTGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGA...GGGTTTTGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGCATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGAACTAGATGAATCTGCAGCTGACAAGTCGCCCATTGCTCATGGCTACTTTACTGGAAAACATTGGTaGCTCAGGGCTTCCGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: AELDESAADKSPIAHGYFTGKHW*LRASVS Trigger: GGACACGGAAGCCCTGAGTCACCAATGTTTTCCAGT...AAAGTAGCCATGAGCAATGGGCGACTTGTCAGCTGCAGATTCATCTAGTTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR-3UTR GCA 90 bp | AGGTGGAACATCAAGTTCACTAAAGCCAAGGACTGCTACAAAGGTGGAAACCCATCCCAGCCCACTTCTTaGTTGCACATGCGCACACAA | + |
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Preference number: 2 (lower is better) Translates to: RWNIKFTKAKDCYKGGNPSQPTS*LHMRTQ Trigger: TTGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGA...TGGGTTTCCACCTTTGTAGCAGTCCTTGGCTTTAGTGAACTTGATGTTCCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR CAA 90 bp | GGCCTTTGCTGCCCACATTTTGAGTTCAAATGGCTCAATTACAGCTaGTACATCTTCCAAAGCATGCTGTCTGGTGGGATCTTCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: GLCCPHFEFKWLNYS*YIFQSMLSGGIFRC Trigger: GCACCTGAAGATCCCACCAGACAGCATGCTTTGGAAGATGTACAAGCTGTAATTGAGCCATTTGAACTCAAAATGTGGGCAGCAAAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR-3UTR GCA 90 bp | ATACATGGAGAATACATCTATTTTCTTAGTCTTAGATTCCTTCTGGCACCCTACCTGTCAAAGCCTGGGTaGAGGTGCCAAGCTACCGTC | + |
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Preference number: 2 (lower is better) Translates to: IHGEYIYFLSLRFLLAPYLSKPG*RCQATV Trigger: GACGGTAGCTTGGCACCTGCACCCAGGCTTTGACAG...GTAGGGTGCCAGAAGGAATCTAAGACTAAGAAAATAGATGTATTCTCCATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGAATACATCTATTTTCTTAGTCTTAGATTCCTTCTGGCACCCTACTAGCTATCAGCAGCAGCACTaGTGTCTCTGCTTCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: MENTSIFLVLDSFWHPTSYQQQH*CLCFPG Trigger: TCCAGGGAAGCAGAGACATCAGTGCTGCTGCTGATA...GCTAGTAGGGTGCCAGAAGGAATCTAAGACTAAGAAAATAGATGTATTCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR-3UTR CCA 90 bp | ATACATGGAGAATACATCTATTTTCTTAGTCTTAGATTCCTTCTGGCACCCTACCACATGCGCACACAATaGGAAGGCTGTCCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: IHGEYIYFLSLRFLLAPYHMRTQ*EGCPVL Trigger: CAGCACTGGACAGCCTTCCCATTGTGTGCGCATGTG...GTAGGGTGCCAGAAGGAATCTAAGACTAAGAAAATAGATGTATTCTCCATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGAATACATCTATTTTCTTAGTCTTAGATTCCTTCTGGCACCCTACTAGCCCAGCAACCATGGCATaGAAACACTTGCATTATCAG | + |
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Preference number: 2 (lower is better) Translates to: MENTSIFLVLDSFWHPTSPATMA*KHLHYQ Trigger: CTGATAATGCAAGTGTTTCCATGCCATGGTTGCTGG...GCTAGTAGGGTGCCAGAAGGAATCTAAGACTAAGAAAATAGATGTATTCTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGAACATCAAGTTCACTAAAGCCAAGGACTGCTACAAAGGTGGAAACCCACATTTTGAGTTCAAATaGCTCAATTACAGCTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: RWNIKFTKAKDCYKGGNPHFEFK*LNYSLY Trigger: GTACAAGCTGTAATTGAGCCATTTGAACTCAAAATG...TGGGTTTCCACCTTTGTAGCAGTCCTTGGCTTTAGTGAACTTGATGTTCCACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR CAA 90 bp | TACAATGTGTGCTCAAGATACATTAACCCTCACACAAATTCTGCATaGCACCAGGTACTGACACAGCCTCAATCAAAAAGTAAAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: YNVCSRYINPHTNSA*HQVLTQPQSKSKNA Trigger: AGCATTTTTACTTTTTGATTGAGGCTGTGTCAGTACCTGGTGCAATGCAGAATTTGTGTGAGGGTTAATGTATCTTGAGCACACATTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR TCA 72 bp | GGGGCTGGGGCCAGCCAGTGGCTAGAAGCAAGGATGTaGGAACTGATCTATCCCAGAGGGCACAGGGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: GAGASQWLEARM*ELIYPRGHRER Trigger: TCTTTCCCTGTGCCCTCTGGGATAGATCAGTTCTCACATCCTTGCTTCTAGCCACTGGCTGGCCCCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR TCA 72 bp | CCAGCCAAAAGCCCATGCCCATCTGCCTCCCCAAAGTaGGATCGAGGTGTGGAGATGCTGCAGGTCTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: PAKSPCPSASPK*DRGVEMLQVSC Trigger: ACAGGAGACCTGCAGCATCTCCACACCTCGATCTCACTTTGGGGAGGCAGATGGGCATGGGCTTTTGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR GCA 72 bp | GCAGGTCTCCTGTCTCTAGGGCCACTGTTTCCACTCTaGAGGACTAGAGGGGGCACATTCCCCCTTTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: AGLLSLGPLFPL*RTRGGTFPLSD Trigger: GTCAGAAAGGGGGAATGTGCCCCCTCTAGTCCTGCAGAGTGGAAACAGTGGCCCTAGAGACAGGAGACCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR CCA 72 bp | GGGCACAGGAGTCAGGTCTGTGCAGTACAAACTCTATaGCCAGCCAAAAGCCCATGCCCATCTGCCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: GHRSQVCAVQTL*PAKSPCPSASP Trigger: TGGGGAGGCAGATGGGCATGGGCTTTTGGCTGGCCATAGAGTTTGTACTGCACAGACCTGACTCCTGTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR GCA 72 bp | TCAAAAGGGCCTCCCAGCCCACTTCTTGCTTGCACATaGGCACACAATGGGAAGGCTGTCCAGTGCTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: SKGPPSPLLACT*AHNGKAVQCWV Trigger: TACCCAGCACTGGACAGCCTTCCCATTGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGAGGCCCTTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR GCA 72 bp | AAATTTGAGGGAGGGCAGCCTGGGCAACCAGCTCAATaGCCCTTGAGTCCAGATCCTCTGCGTCCATTCCCT | + |
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Preference number: 3 (lower is better) Translates to: KFEGGQPGQPAQ*PLSPDPLRPFP Trigger: AGGGAATGGACGCAGAGGATCTGGACTCAAGGGGCATTGAGCTGGTTGCCCAGGCTGCCCTCCCTCAAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR GCA 72 bp | ATCTTCCAAAGCATGCTGTCTGGTGGGATCTTCAGGTaGCAGGGGGCACAGGAGTCAGGTCTGTGCAGTACA | + |
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Preference number: 3 (lower is better) Translates to: IFQSMLSGGIFR*QGAQESGLCST Trigger: TGTACTGCACAGACCTGACTCCTGTGCCCCCTGGCACCTGAAGATCCCACCAGACAGCATGCTTTGGAAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR-3UTR CAA 90 bp | AGCCTCACCATGCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACACCAGAGAACAGGGTCTaGACCCACTTCCTAAGCACC | + |
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Preference number: 3 (lower is better) Translates to: SLTMHAFQGKHQLCGQTTPENRV*THFLST Trigger: GGTGCTTAGGAAGTGGGTCAAGACCCTGTTCTCTGG...TGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGCATGGTGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR GCA 72 bp | TACATTTCAAAAGGGCCTCCCAGCCCACTTCTTGCTTaGACATGCGCACACAATGGGAAGGCTGTCCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: YISKGPPSPLLA*TCAHNGKAVQC Trigger: GCACTGGACAGCCTTCCCATTGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGAGGCCCTTTTGAAATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR GCA 72 bp | GCAGCAGCACTGATGTCTCTGCTTCCCTGGAGTAGCTaGTTCCAGGAAAGGGTGCTGGTGTTAGCAGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: AAALMSLLPWSS*FQERVLVLAVS Trigger: ACTAACTGCTAACACCAGCACCCTTTCCTGGAAGCAGCTACTCCAGGGAAGCAGAGACATCAGTGCTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR GCA 72 bp | ACAAACTCTATGGCCAGCCAAAAGCCCATGCCCATCTaGCTCCCCAAAGTGAGATCGAGGTGTGGAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: TNSMASQKPMPI*LPKVRSRCGDA Trigger: AGCATCTCCACACCTCGATCTCACTTTGGGGAGGCAGATGGGCATGGGCTTTTGGCTGGCCATAGAGTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR CCA 72 bp | TTACAGCTTGTACATCTTCCAAAGCATGCTGTCTGGTaGGATCTTCAGGTGCCAGGGGGCACAGGAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: LQLVHLPKHAVW*DLQVPGGTGVR Trigger: CCTGACTCCTGTGCCCCCTGGCACCTGAAGATCCCACCAGACAGCATGCTTTGGAAGATGTACAAGCTGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR-3UTR CAA 90 bp | CTCTATGGCCAGCCAAAAGCCCATGCCCATCTGCCTCCCCAAAGTGAGATCGAGATGGCATGGAAACACTaGCATTATCAGCAGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: LYGQPKAHAHLPPQSEIEMAWKH*HYQQQH Trigger: GTGCTGCTGCTGATAATGCAAGTGTTTCCATGCCAT...CTCGATCTCACTTTGGGGAGGCAGATGGGCATGGGCTTTTGGCTGGCCATAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR TCA 72 bp | GGTCTTGACCCACTTCCTAAGCACCACACGTCTTGGTaGCCCAAGGTCCTACTCCCCAGATGTCACAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: GLDPLPKHHTSW*PKVLLPRCHRK Trigger: TTTTCTGTGACATCTGGGGAGTAGGACCTTGGGTCACCAAGACGTGTGGTGCTTAGGAAGTGGGTCAAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR TCA 72 bp | TGGACAAACCACAAAACCCAGCCATCCCTCCCCCAATaGAAGCCAGAGAACAGGGTCTTGACCCACTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: WTNHKTQPSLPQ*KPENRVLTHFL Trigger: TAGGAAGTGGGTCAAGACCCTGTTCTCTGGCTTTCATTGGGGGAGGGATGGCTGGGTTTTGTGGTTTGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| 3UTR CCA 72 bp | CAATTACAGCTTGTACATCTTCCAAAGCATGCTGTCTaGTGGGATCTTCAGGTGCCAGGGGGCACAGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: QLQLVHLPKHAV*WDLQVPGGTGV Trigger: GACTCCTGTGCCCCCTGGCACCTGAAGATCCCACCAGACAGCATGCTTTGGAAGATGTACAAGCTGTAATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR TCA 72 bp | ATGGCATGGAAACACTTGCATTATCAGCAGCAGCACTaGTGTCTCTGCTTCCCTGGAGTAGCTGCTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: MAWKHLHYQQQH*CLCFPGVAASR Trigger: CCTGGAAGCAGCTACTCCAGGGAAGCAGAGACATCAGTGCTGCTGCTGATAATGCAAGTGTTTCCATGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| 3UTR TCA 72 bp | GTAAGAGCCACTGCCGTATTAACTGGAAAACATTGGTaGCTCAGGGCTTCCGTGTCCAGACTGAACACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VRATAVLTGKHW*LRASVSRLNTP Trigger: GGGAGTGTTCAGTCTGGACACGGAAGCCCTGAGTCACCAATGTTTTCCAGTTAATACGGCAGTGGCTCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| 3UTR CCA 72 bp | ACACTCCCTGGGACACTGACAAACACCCAGCAACCATaGCATGGAAACACTTGCATTATCAGCAGCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: TLPGTLTNTQQP*HGNTCIISSST Trigger: AGTGCTGCTGCTGATAATGCAAGTGTTTCCATGCCATGGTTGCTGGGTGTTTGTCAGTGTCCCAGGGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| 3UTR CCA 72 bp | CCGTCTCTGAACTGTAAGAGCCACTGCCGTATTAACTaGAAAACATTGGTGACTCAGGGCTTCCGTGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PSLNCKSHCRIN*KTLVTQGFRVQ Trigger: CTGGACACGGAAGCCCTGAGTCACCAATGTTTTCCAGTTAATACGGCAGTGGCTCTTACAGTTCAGAGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| 3UTR TCA 72 bp | GAAGGGCAGGGGCTAGGGCCTTTGCTGCCCACATTTTaGGTTCAAATGGCTCAATTACAGCTTGTACATCTT | + |
|
Preference number: 3 (lower is better) Translates to: EGQGLGPLLPTF*VQMAQLQLVHL Trigger: AAGATGTACAAGCTGTAATTGAGCCATTTGAACTCAAAATGTGGGCAGCAAAGGCCCTAGCCCCTGCCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| 3UTR-3UTR CAA 90 bp | ATACATGGAGAATACATCTATTTTCTTAGTCTTAGATTCCTTCTGGCACCCTACCCAGAGAACAGGGTCTaGACCCACTTCCTAAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: IHGEYIYFLSLRFLLAPYPENRV*THFLST Trigger: GGTGCTTAGGAAGTGGGTCAAGACCCTGTTCTCTGG...GTAGGGTGCCAGAAGGAATCTAAGACTAAGAAAATAGATGTATTCTCCATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| 3UTR CCA 72 bp | CCTACTAGGAGGCTACTAAATTTAGAACTGTTTGGGTaGACAGGGCCTGTGACTGATGAACAAATAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: PTRRLLNLELFG*TGPVTDEQINS Trigger: TGAGTTTATTTGTTCATCAGTCACAGGCCCTGTCCACCCAAACAGTTCTAAATTTAGTAGCCTCCTAGTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| 3UTR TCA 72 bp | TTAACCCTCACACAAATTCTGCATTGCACCAGGTACTaGCACAGCCTCAATCAAAAAGTAAAAATGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LTLTQILHCTRY*HSLNQKVKMLW Trigger: CCAGAGCATTTTTACTTTTTGATTGAGGCTGTGTCAGTACCTGGTGCAATGCAGAATTTGTGTGAGGGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| 3UTR CCA 72 bp | GAGAATACATCTATTTTCTTAGTCTTAGATTCCTTCTaGCACCCTACTAGCTTCAAACCCTGTCACTTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ENTSIFLVLDSF*HPTSFKPCHLD Trigger: GTCTAAGTGACAGGGTTTGAAGCTAGTAGGGTGCCAGAAGGAATCTAAGACTAAGAAAATAGATGTATTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| 3UTR CAA 72 bp | GAGGGAGGGCAGCCTGGGCAACCAGCTCAATGCCCCTaGAGTCCAGATCCTCTGCGTCCATTCCCTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EGGQPGQPAQCP*SPDPLRPFPAP Trigger: GGGGGCAGGGAATGGACGCAGAGGATCTGGACTCAAGGGGCATTGAGCTGGTTGCCCAGGCTGCCCTCCCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR GCA 90 bp | GCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACAAAACCCAGCCACGCTGTCTCTCCTGCTaGTCCCTGACTTGGCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ARFPGQASAMWTNHKTQPRCLSC*SLTWRR Trigger: CCGGCGCCAAGTCAGGGAGCAGCAGGAGAGACAGCG...TGGCTGGGTTTTGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAACCAGCTCAATGCCCCTTGAGTCCAGATCCTCTGCGTCCATTCCCTGCCTTCAAGGTCAGTCTCTaGGCCCTCAGTCCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQPAQCPLSPDPLRPFPAFKVSL*ALSPSR Trigger: TCTGGAGGGACTGAGGGCCCAGAGACTGACCTTGAA...GGCAGGGAATGGACGCAGAGGATCTGGACTCAAGGGGCATTGAGCTGGTTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR TCA 90 bp | GCAGCACTGATGTCTCTGCTTCCCTGGAGTAGCTGCTTCCAGGAAAGGGTGCTGTCATCCATGCCGTGGTaGATGTTGTGGAGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AALMSLLPWSSCFQERVLSSMPW*MLWREE Trigger: CTCCTCCCTCCACAACATTCACCACGGCATGGATGA...CAGCACCCTTTCCTGGAAGCAGCTACTCCAGGGAAGCAGAGACATCAGTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR GCA 90 bp | CATACATTTCAAAAGGGCCTCCCAGCCCACTTCTTGCTTGCACATGCGCACACATCTCGCTGTCTCTCCTaGTGCTCCCTGACTTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HTFQKGLPAHFLLAHAHTSRCLS*CSLTWR Trigger: GCGCCAAGTCAGGGAGCAGCAGGAGAGACAGCGAGA...TGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGAGGCCCTTTTGAAATGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR TCA 90 bp | GCACCACACGTCTTGGTGACCCAAGGTCCTACTCCCCAGATGTCACAGAAAACACAAGGGCTCCTTGCTTaGCAAAATCTCCAGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: APHVLVTQGPTPQMSQKTQGLLA*QNLQAL Trigger: GAGCGCCTGGAGATTTTGTCAAGCAAGGAGCCCTTG...TGTTTTCTGTGACATCTGGGGAGTAGGACCTTGGGTCACCAAGACGTGTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR TCA 90 bp | GGCTACTTTCAAAGTGGCAAAGGCCCATCTGTCAAAGCCTGGGTGCAGGTGCCAGCATCCCACCGATCATaGAGTACTTGTCCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GYFQSGKGPSVKAWVQVPASHRS*STCPGR Trigger: CCTTCCAGGACAAGTACTTCATGATCGGTGGGATGC...TGGCACCTGCACCCAGGCTTTGACAGATGGGCCTTTGCCACTTTGAAAGTAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAAGGATGTGAGAACTGATCTATCCCAGAGGGCACAGGGAAAGACCTCTTCTCGCTGTCTCTCCTaGTGCTCCCTGACTTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RSKDVRTDLSQRAQGKTSSRCLS*CSLTWR Trigger: GCGCCAAGTCAGGGAGCAGCAGGAGAGACAGCGAGA...AGAGGTCTTTCCCTGTGCCCTCTGGGATAGATCAGTTCTCACATCCTTGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| 3UTR CAA 72 bp | AGGCATACATTTCAAAAGGGCCTCCCAGCCCACTTCTaGCTTGCACATGCGCACACAATGGGAAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHTFQKGLPAHF*LAHAHTMGRLS Trigger: GGACAGCCTTCCCATTGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGAGGCCCTTTTGAAATGTATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| 3UTR CAA 72 bp | AGGTCAGAGTCATCTCACAAGGCACTGAATGGAAATTaGAGGGAGGGCAGCCTGGGCAACCAGCTCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSESSHKALNGN*REGSLGNQLNA Trigger: GGCATTGAGCTGGTTGCCCAGGCTGCCCTCCCTCAAATTTCCATTCAGTGCCTTGTGAGATGACTCTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR TCA 90 bp | ACCATGCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACAAAACCCCAAGGGCTCCTTGCTTaGCAAAATCTCCAGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TMHAFQGKHQLCGQTTKPQGLLA*QNLQAL Trigger: GAGCGCCTGGAGATTTTGTCAAGCAAGGAGCCCTTG...GGGTTTTGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGCATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCCTCCCAGCCCACTTCTTGCTTGCACATGCGCACACAATGGGAAGGCTGTTATTCAAGGGCTCCTTaGTTGACAAAATCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RASQPTSCLHMRTQWEGCYSRAP*LTKSPG Trigger: GCCTGGAGATTTTGTCAAGCAAGGAGCCCTTGAATA...ACAGCCTTCCCATTGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGAGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR GCA 90 bp | GCACCACACGTCTTGGTGACCCAAGGTCCTACTCCCCAGATGTCACAGAAAACACACGAGGAACATGACTaGACAAGTGAGCAGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: APHVLVTQGPTPQMSQKTHEEHD*TSEQHP Trigger: GGGATGCTGCTCACTTGTGCAGTCATGTTCCTCGTG...TGTTTTCTGTGACATCTGGGGAGTAGGACCTTGGGTCACCAAGACGTGTGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| 3UTR CAA 72 bp | ATACATTTCAAAAGGGCCTCCCAGCCCACTTCTTGCTaGCACATGCGCACACAATGGGAAGGCTGTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IHFKRASQPTSC*HMRTQWEGCPV Trigger: CACTGGACAGCCTTCCCATTGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGAGGCCCTTTTGAAATGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR GCA 90 bp | GCACCACACGTCTTGGTGACCCAAGGTCCTACTCCCCAGATGTCACAGAAAACATTCCTGAGGGCAGTCTaGAAGTGCTGGACATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: APHVLVTQGPTPQMSQKTFLRAV*KCWTSY Trigger: GTATGATGTCCAGCACTTGCAGACTGCCCTCAGGAA...TGTTTTCTGTGACATCTGGGGAGTAGGACCTTGGGTCACCAAGACGTGTGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR CCA 90 bp | GCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACAAAACCCAGCCAGCAGTGATTCATCCATaGGAATGGTGGTGTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARFPGQASAMWTNHKTQPAVIHP*EWWCQS Trigger: ACTCTGACACCACCATTCCCATGGATGAATCACTGC...TGGCTGGGTTTTGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR CCA 90 bp | GCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACAAAACCCAGCCAATGAAGTACTTGTCCTaGAAGGCCCGCTTCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ARFPGQASAMWTNHKTQPMKYLS*KARFSI Trigger: GATTGAGAAGCGGGCCTTCCAGGACAAGTACTTCAT...TGGCTGGGTTTTGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTCACCATGCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACATATTCAAGGGCTCCTTaGTTGACAAAATCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLTMHAFQGKHQLCGQTTYSRAP*LTKSPG Trigger: GCCTGGAGATTTTGTCAAGCAAGGAGCCCTTGAATA...TGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGCATGGTGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR GCA 90 bp | GCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACAAAACCCAGCCAAGGGAGGAGTTAAACTaGAGTGATTCATCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARFPGQASAMWTNHKTQPREELN*SDSSMG Trigger: TCCCATGGATGAATCACTGCAGTTTAACTCCTCCCT...TGGCTGGGTTTTGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR GCA 90 bp | ATACATGGAGAATACATCTATTTTCTTAGTCTTAGATTCCTTCTGGCACCCTACCGCTGTCTCTCCTGCTaGTCCCTGACTTGGCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IHGEYIYFLSLRFLLAPYRCLSC*SLTWRR Trigger: CCGGCGCCAAGTCAGGGAGCAGCAGGAGAGACAGCG...GTAGGGTGCCAGAAGGAATCTAAGACTAAGAAAATAGATGTATTCTCCATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR GCA 90 bp | TTTGATACTAAGCCACGATTAGTCCTGAGGGGAGAGGTGTCTTCACAGTTAAGGCACGAGGAACATGACTaGACAAGTGAGCAGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: FDTKPRLVLRGEVSSQLRHEEHD*TSEQHP Trigger: GGGATGCTGCTCACTTGTGCAGTCATGTTCCTCGTG...CCTTAACTGTGAAGACACCTCTCCCCTCAGGACTAATCGTGGCTTAGTATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| 3UTR CAA 72 bp | AACTGTAAGAGCCACTGCCGTATTAACTGGAAAACATaGGTGACTCAGGGCTTCCGTGTCCAGACTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: NCKSHCRINWKT*VTQGFRVQTEH Trigger: GTGTTCAGTCTGGACACGGAAGCCCTGAGTCACCAATGTTTTCCAGTTAATACGGCAGTGGCTCTTACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR GCA 90 bp | GCACCACACGTCTTGGTGACCCAAGGTCCTACTCCCCAGATGTCACAGAAAACATATTTGCTCTATGCTTaGTTGGATCTCATTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: APHVLVTQGPTPQMSQKTYLLYA*LDLIFY Trigger: GTAGAAAATGAGATCCAAGCAAGCATAGAGCAAATA...TGTTTTCTGTGACATCTGGGGAGTAGGACCTTGGGTCACCAAGACGTGTGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR GCA 90 bp | GCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACAAAACCCAGCCATATTTGCTCTATGCTTaGTTGGATCTCATTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: ARFPGQASAMWTNHKTQPYLLYA*LDLIFY Trigger: GTAGAAAATGAGATCCAAGCAAGCATAGAGCAAATA...TGGCTGGGTTTTGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR CCA 90 bp | AGGTTTGATACTAAGCCACGATTAGTCCTGAGGGGAGAGGTGTCTTCACAGTTAACATCATACTTTAGCTaGTCGACACGGAGTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RFDTKPRLVLRGEVSSQLTSYFS*STRSLA Trigger: TGCCAAACTCCGTGTCGACCAGCTAAAGTATGATGT...TAACTGTGAAGACACCTCTCCCCTCAGGACTAATCGTGGCTTAGTATCAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR TCA 90 bp | ATGGAGAATACATCTATTTTCTTAGTCTTAGATTCCTTCTGGCACCCTACTAGCTCAAGGATCTTCTTCTaGGTCCCCTTCAAGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MENTSIFLVLDSFWHPTSSRIFF*VPFKVS Trigger: ACTGACCTTGAAGGGGACTCAGAAGAAGATCCTTGA...GCTAGTAGGGTGCCAGAAGGAATCTAAGACTAAGAAAATAGATGTATTCTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| 3UTR CAA 72 bp | TGCTCAAGATACATTAACCCTCACACAAATTCTGCATaGCACCAGGTACTGACACAGCCTCAATCAAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSRYINPHTNSA*HQVLTQPQSKS Trigger: ACTTTTTGATTGAGGCTGTGTCAGTACCTGGTGCAATGCAGAATTTGTGTGAGGGTTAATGTATCTTGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR CCA 90 bp | ATGGAGAATACATCTATTTTCTTAGTCTTAGATTCCTTCTGGCACCCTACTAGCACATCATACTTTAGCTaGTCGACACGGAGTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MENTSIFLVLDSFWHPTSTSYFS*STRSLA Trigger: TGCCAAACTCCGTGTCGACCAGCTAAAGTATGATGT...GCTAGTAGGGTGCCAGAAGGAATCTAAGACTAAGAAAATAGATGTATTCTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR CAA 90 bp | ACCATGCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACAAAACCCCTGCTGCTCCCTGACTaGGCGCCGGTGCTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TMHAFQGKHQLCGQTTKPLLLPD*APVLKV Trigger: AACTTTCAGCACCGGCGCCAAGTCAGGGAGCAGCAG...GGGTTTTGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGCATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR CAA 90 bp | AAGCCTCACCATGCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACCCGATCATGAAGTACTaGTCCTGGAAGGCCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPHHARFPGQASAMWTNHPIMKY*SWKARF Trigger: GAAGCGGGCCTTCCAGGACAAGTACTTCATGATCGG...GTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGCATGGTGAGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR CAA 90 bp | GAAAGACCTCTCTCCTCATCTTCTCACTTGTGCTCCAGCCCACTCCATCAGGAGCCGATCATGAAGTACTaGTCCTGGAAGGCCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ERPLSSSSHLCSSPLHQEPIMKY*SWKARF Trigger: GAAGCGGGCCTTCCAGGACAAGTACTTCATGATCGG...CTCCTGATGGAGTGGGCTGGAGCACAAGTGAGAAGATGAGGAGAGAGGTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS CCA 90 bp | ACTGCACAAGTGAGCAGCATCCCACCGATCATGAAGTACTTGTCCTaGAAGGCCCGCTTCTCAATCAGCCTCATCACTGTGTTGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: TAQVSSIPPIMKYLS*KARFSISLITVLDK Trigger: CTTGTCCAACACAGTGATGAGGCTGATTGAGAAGCGGGCCTTCCAGGACAAGTACTTCATGATCGGTGGGATGCTGCTCACTTGTGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR CAA 90 bp | CACAGAAAACAAAGCAGGTTTGATACTAAGCCACGATTAGTCCTGAGGGGAGAGCTGCTGCTCCCTGACTaGGCGCCGGTGCTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HRKQSRFDTKPRLVLRGELLLPD*APVLKV Trigger: AACTTTCAGCACCGGCGCCAAGTCAGGGAGCAGCAG...CTCTCCCCTCAGGACTAATCGTGGCTTAGTATCAAACCTGCTTTGTTTTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS TCA 90 bp | TCCAGAATACTGTGCCCGCCTCCAATGAGGTCATCCATGCCGTGGTaGATGTTGTGGAGGGAGGAGTTAAACTGCAGTGATTCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SRILCPPPMRSSMPW*MLWREELNCSDSSM Trigger: CATGGATGAATCACTGCAGTTTAACTCCTCCCTCCACAACATTCACCACGGCATGGATGACCTCATTGGAGGCGGGCACAGTATTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
||
| CDS-3UTR CAA 90 bp | AGCCTCACCATGCACGCTTTCCAGGGCAAGCATCAGCTATGTGGACAAACCACATGGTCGACACGGAGTTaGGCATTCTGTCTTCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: SLTMHAFQGKHQLCGQTTWSTRS*AFCLLF Trigger: GAATAGAAGACAGAATGCCAAACTCCGTGTCGACCA...TGTGGTTTGTCCACATAGCTGATGCTTGCCCTGGAAAGCGTGCATGGTGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR CAA 90 bp | CATACATTTCAAAAGGGCCTCCCAGCCCACTTCTTGCTTGCACATGCGCACACAAGCCTCATCACTGTGTaGGACAAGCCGAGCATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: HTFQKGLPAHFLLAHAHTSLITV*DKPSML Trigger: TAACATGCTCGGCTTGTCCAACACAGTGATGAGGCT...TGTGTGCGCATGTGCAAGCAAGAAGTGGGCTGGGAGGCCCTTTTGAAATGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS-3UTR CAA 90 bp | AAAGACCTCTCTCCTCATCTTCTCACTTGTGCTCCAGCCCACTCCATCAGGAGTTGGTCGACACGGAGTTaGGCATTCTGTCTTCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: KDLSPHLLTCAPAHSIRSWSTRS*AFCLLF Trigger: GAATAGAAGACAGAATGCCAAACTCCGTGTCGACCA...ACTCCTGATGGAGTGGGCTGGAGCACAAGTGAGAAGATGAGGAGAGAGGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
||
| CDS TCA 90 bp | ATCCATGCCGTGGTGAATGTTGTGGAGGGAGGAGTTAAACTGCAGTaGTTCATCCATGGGAATGGTGGTGTCAGAGTCGTTAGTGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IHAVVNVVEGGVKLQ*FIHGNGGVRVVSGE Trigger: TTCACCACTAACGACTCTGACACCACCATTCCCATGGATGAATCACTGCAGTTTAACTCCTCCCTCCACAACATTCACCACGGCATGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| CDS TCA 72 bp | CCCTCAGTCCCTCCAGAATACTGTGCCCGCCTCCAATaGGGTCATCCATGCCGTGGTGAATGTTGTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: PSVPPEYCARLQ*GHPCRGECCGG Trigger: CCCTCCACAACATTCACCACGGCATGGATGACCTCATTGGAGGCGGGCACAGTATTCTGGAGGGACTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| CDS TCA 72 bp | CTGTGCCCGCCTCCAATGAGGTCATCCATGCCGTGGTaGATGTTGTGGAGGGAGGAGTTAAACTGCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: LCPPPMRSSMPW*MLWREELNCSD Trigger: ATCACTGCAGTTTAACTCCTCCCTCCACAACATTCACCACGGCATGGATGACCTCATTGGAGGCGGGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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| CDS CCA 72 bp | GTGAGCAGCATCCCACCGATCATGAAGTACTTGTCCTaGAAGGCCCGCTTCTCAATCAGCCTCATCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: VSSIPPIMKYLS*KARFSISLITV Trigger: CACAGTGATGAGGCTGATTGAGAAGCGGGCCTTCCAGGACAAGTACTTCATGATCGGTGGGATGCTGCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| CDS CAA 72 bp | GCACAAGTGAGCAGCATCCCACCGATCATGAAGTACTaGTCCTGGAAGGCCCGCTTCTCAATCAGCCTCATC | + |
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Preference number: 6 (lower is better) Translates to: AQVSSIPPIMKY*SWKARFSISLI Trigger: GATGAGGCTGATTGAGAAGCGGGCCTTCCAGGACAAGTACTTCATGATCGGTGGGATGCTGCTCACTTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| CDS CAA 90 bp | AACATGACTGCACAAGTGAGCAGCATCCCACCGATCATGAAGTACTaGTCCTGGAAGGCCCGCTTCTCAATCAGCCTCATCACTGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: NMTAQVSSIPPIMKY*SWKARFSISLITVL Trigger: CAACACAGTGATGAGGCTGATTGAGAAGCGGGCCTTCCAGGACAAGTACTTCATGATCGGTGGGATGCTGCTCACTTGTGCAGTCATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| CDS CAA 72 bp | TGGAAGGCCCGCTTCTCAATCAGCCTCATCACTGTGTaGGACAAGCCGAGCATGTTAGCAATGTCAAGGATC | + |
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Preference number: 6 (lower is better) Translates to: WKARFSISLITV*DKPSMLAMSRI Trigger: GATCCTTGACATTGCTAACATGCTCGGCTTGTCCAACACAGTGATGAGGCTGATTGAGAAGCGGGCCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021329.14 ENSMUST00000107013.3 |
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| CDS TCA 72 bp | GTGGTGAATGTTGTGGAGGGAGGAGTTAAACTGCAGTaGTTCATCCATGGGAATGGTGGTGTCAGAGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: VVNVVEGGVKLQ*FIHGNGGVRVV Trigger: AACGACTCTGACACCACCATTCCCATGGATGAATCACTGCAGTTTAACTCCTCCCTCCACAACATTCACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021329.14 |
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