Pregenerated sensors for GOSR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010392Ensembl transcript IDs: ENSMUST00000010536.9
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCTGGTGCTACGAGGAGTCCAGCTCCGAGGCCCGCTGATCATCTaGCCTCGCCAGTCACTGAAGCCCAGCTTCTCAGCTTCTGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: SLVLRGVQLRGPLII*PRQSLKPSFSASAC Trigger: GCAGGCAGAAGCTGAGAAGCTGGGCTTCAGTGACTGGCGAGGCCAGATGATCAGCGGGCCTCGGAGCTGGACTCCTCGTAGCACCAGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR GCA 90 bp | AAAAACTTCGGCTTCAGCTCAGCCCGACCAGGTCAGAGCCACAGGTaGAGTTTGGAATCCATCTGCTGGCGCCCGTGGCCGGGATGGTCT | + |
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Preference number: 1 (lower is better) Translates to: KNFGFSSARPGQSHR*SLESICWRPWPGWS Trigger: AGACCATCCCGGCCACGGGCGCCAGCAGATGGATTCCAAACTGCACCTGTGGCTCTGACCTGGTCGGGCTGAGCTGAAGCCGAAGTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR CCA 90 bp | AAGACAAGCAACATAATTCCATCTGTTCATCTGAGTGCAGCGTCCTaGGGCGGCCCAGCTGCTGTGCGGTGGCGGCTGGCAGTGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: KTSNIIPSVHLSAAS*GGPAAVRWRLAVEQ Trigger: CTGCTCCACTGCCAGCCGCCACCGCACAGCAGCTGGGCCGCCCCAGGACGCTGCACTCAGATGAACAGATGGAATTATGTTGCTTGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR GCA 90 bp | TGCACAGGGCACGAATACTGTGACATCAGGTCACAGTGCTACCCTTaGTCCAGGCGGCACCACACTGACAGACAGGAAGGCCAGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: CTGHEYCDIRSQCYP*SRRHHTDRQEGQRA Trigger: GGCTCTCTGGCCTTCCTGTCTGTCAGTGTGGTGCCGCCTGGAGCAAGGGTAGCACTGTGACCTGATGTCACAGTATTCGTGCCCTGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR TCA 90 bp | CCAACAGAGGAGGAAGGGATAGATCTGCACAGGGCACGAATACTGTaGCATCAGGTCACAGTGCTACCCTTGCTCCAGGCGGCACCACAC | + |
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Preference number: 1 (lower is better) Translates to: PTEEEGIDLHRARIL*HQVTVLPLLQAAPH Trigger: GTGTGGTGCCGCCTGGAGCAAGGGTAGCACTGTGACCTGATGTCACAGTATTCGTGCCCTGTGCAGATCTATCCCTTCCTCCTCTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR TCA 90 bp | GTGTATCAAGGTGGCCCAGAGGCACCGTCCCCCACCATAGAATGGTaGAGAGCTCTAATATCCACTCACTGCCCCTGGACAATGTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: VYQGGPEAPSPTIEW*RALISTHCPWTMCW Trigger: CCAGCACATTGTCCAGGGGCAGTGAGTGGATATTAGAGCTCTTCACCATTCTATGGTGGGGGACGGTGCCTCTGGGCCACCTTGATACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR GCA 90 bp | ATCTGGCCTCGCCAGTCACTGAAGCCCAGCTTCTCAGCTTCTGCCTaGTTACCTCCTAGGGAGACACAGCAACGGAAACCTTTTGTTGTT | + |
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Preference number: 1 (lower is better) Translates to: IWPRQSLKPSFSASA*LPPRETQQRKPFVV Trigger: AACAACAAAAGGTTTCCGTTGCTGTGTCTCCCTAGGAGGTAAGCAGGCAGAAGCTGAGAAGCTGGGCTTCAGTGACTGGCGAGGCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR CCA 90 bp | ACACATGGGAAACTGGAGGAAGGTACTGTTTGGAGCCAGGGTTGGTaGTATACATCAGATAGTAGTCCCAGGGTCTCAGGAAGCCGAGGC | + |
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Preference number: 1 (lower is better) Translates to: THGKLEEGTVWSQGW*YTSDSSPRVSGSRG Trigger: GCCTCGGCTTCCTGAGACCCTGGGACTACTATCTGATGTATACCACCAACCCTGGCTCCAAACAGTACCTTCCTCCAGTTTCCCATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR TCA 90 bp | CACCCTCTCACTGTCTCCTTGCAGTGGCTCATGAGCAGACCTCACTaGGAACCAAGTCCCCTCCCTCACTTCCTAGTATTAAGCTTCACA | + |
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Preference number: 1 (lower is better) Translates to: HPLTVSLQWLMSRPH*EPSPLPHFLVLSFT Trigger: TGTGAAGCTTAATACTAGGAAGTGAGGGAGGGGACTTGGTTCTCAGTGAGGTCTGCTCATGAGCCACTGCAAGGAGACAGTGAGAGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR TCA 90 bp | TCAGGAAGCCGAGGCAGGAACTCAAGGCCAGCCGGAGCTAAACAGTaGGACCTCTCAAGCCAGGGCAGACAAATACACTTGGAATTTTCT | + |
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Preference number: 1 (lower is better) Translates to: SGSRGRNSRPAGAKQ*DLSSQGRQIHLEFS Trigger: AGAAAATTCCAAGTGTATTTGTCTGCCCTGGCTTGAGAGGTCTCACTGTTTAGCTCCGGCTGGCCTTGAGTTCCTGCCTCGGCTTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR TCA 90 bp | AGACGCCCTTTCTACAGCACTCTCCATTTCAGACCACCTCAAACATaGAGCTGGCCTACCAACATCTCACAGAACCCGTGGGACATGGAA | + |
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Preference number: 1 (lower is better) Translates to: RRPFYSTLHFRPPQT*SWPTNISQNPWDME Trigger: TTCCATGTCCCACGGGTTCTGTGAGATGTTGGTAGGCCAGCTTCATGTTTGAGGTGGTCTGAAATGGAGAGTGCTGTAGAAAGGGCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR CCA 90 bp | TCAGTAGCAATGGACTGCACATCTTCACTGAGTCACTGGGACACATaGGAAACTGGAGGAAGGTACTGTTTGGAGCCAGGGTTGGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: SVAMDCTSSLSHWDT*ETGGRYCLEPGLVV Trigger: TACCACCAACCCTGGCTCCAAACAGTACCTTCCTCCAGTTTCCCATGTGTCCCAGTGACTCAGTGAAGATGTGCAGTCCATTGCTACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR GCA 90 bp | GCTTCACATGATATGGGACCGCTAGGGGCAATGACAGGTGCTGATTaGCTGTCAGTGGAAATGCAATTTTATCATGTACAAGCAAATATT | + |
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Preference number: 1 (lower is better) Translates to: ASHDMGPLGAMTGAD*LSVEMQFYHVQANI Trigger: AATATTTGCTTGTACATGATAAAATTGCATTTCCACTGACAGGCAATCAGCACCTGTCATTGCCCCTAGCGGTCCCATATCATGTGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR TCA 90 bp | GGTTGGTGGTATACATCAGATAGTAGTCCCAGGGTCTCAGGAAGCCGAGGCAGGCGCAGCGCTCACAGCTaGCGCAGAGACGAGACGCCC | + |
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Preference number: 2 (lower is better) Translates to: GWWYTSDSSPRVSGSRGRRSAHS*RRDETP Trigger: GGGCGTCTCGTCTCTGCGTCAGCTGTGAGCGCTGCG...CCTGCCTCGGCTTCCTGAGACCCTGGGACTACTATCTGATGTATACCACCAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTTCCTCTGCCGCATCTGCCACAGATGACCTGGGTATGGCCATGCATCCCCTGTGCGGTGGCGGCTaGCAGTGGAGCAGGACCATG | + |
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Preference number: 2 (lower is better) Translates to: FVSSAASATDDLGMAMHPLCGGG*QWSRTM Trigger: CATGGTCCTGCTCCACTGCCAGCCGCCACCGCACAG...GGGATGCATGGCCATACCCAGGTCATCTGTGGCAGATGCGGCAGAGGAAACAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR GCA 90 bp | ATTCTGTCACTGCCCAAAGTAATAGAGAGGTGCAGGCAGGAGTCCCAGGCCCCCGACATCAGGTCACAGTaGTACCCTTGCTCCAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: ILSLPKVIERCRQESQAPDIRSQ*YPCSRR Trigger: CCGCCTGGAGCAAGGGTAGCACTGTGACCTGATGTC...GGGGGCCTGGGACTCCTGCCTGCACCTCTCTATTACTTTGGGCAGTGACAGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | AGCAACATAATTCCATCTGTTCATCTGAGTGCAGCGTCCTGGGGCGGCCCAGCTGGCCCGCTGATCATCTaGCCTCGCCAGTCACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SNIIPSVHLSAASWGGPAGPLII*PRQSLK Trigger: CTTCAGTGACTGGCGAGGCCAGATGATCAGCGGGCC...AGCTGGGCCGCCCCAGGACGCTGCACTCAGATGAACAGATGGAATTATGTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTTCCTCACCTGTCCCCATTTCTGATCCGAGTACCAGGAAGAAGCAGAAACAGGCGGCACCACACTaGCAGACAGGAAGGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GSSSPVPISDPSTRKKQKQAAPH*QTGRPE Trigger: CTCTGGCCTTCCTGTCTGTCAGTGTGGTGCCGCCTG...TTTCTGCTTCTTCCTGGTACTCGGATCAGAAATGGGGACAGGTGAGGAAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGTGGTATACATCAGATAGTAGTCCCAGGGTCTCAGGAAGCCGAGGCAGGTCCACTCACTGCCCCTaGACAATGTGCTGGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GWWYTSDSSPRVSGSRGRSTHCP*TMCWRP Trigger: TGGCCTCCAGCACATTGTCCAGGGGCAGTGAGTGGA...CCTGCCTCGGCTTCCTGAGACCCTGGGACTACTATCTGATGTATACCACCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | GGATGTCAAAACTGTCAGTCAGTCCCAGACTGGGTGTCAGTCTGTCCATGCGCAGTAAGTGTATCAAGGTaGCCCAGAGGCACCGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: GCQNCQSVPDWVSVCPCAVSVSR*PRGTVP Trigger: GGGGACGGTGCCTCTGGGCCACCTTGATACACTTAC...TGCGCATGGACAGACTGACACCCAGTCTGGGACTGACTGACAGTTTTGACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR TCA 90 bp | ACACATGGGAAACTGGAGGAAGGTACTGTTTGGAGCCAGGGTTGGTGGTATACAGCCGGAGCTAAACAGTaGGACCTCTCAAGCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: THGKLEEGTVWSQGWWYTAGAKQ*DLSSQG Trigger: GCCCTGGCTTGAGAGGTCTCACTGTTTAGCTCCGGC...TGTATACCACCAACCCTGGCTCCAAACAGTACCTTCCTCCAGTTTCCCATGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTTCCTCACCTGTCCCCATTTCTGATCCGAGTACCAGGAAGAAGCAGAAATCACAGTGCTACCCTTaGTCCAGGCGGCACCACACT | + |
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Preference number: 2 (lower is better) Translates to: GSSSPVPISDPSTRKKQKSQCYP*SRRHHT Trigger: AGTGTGGTGCCGCCTGGAGCAAGGGTAGCACTGTGA...TTTCTGCTTCTTCCTGGTACTCGGATCAGAAATGGGGACAGGTGAGGAAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR GCA 90 bp | AGCAACATAATTCCATCTGTTCATCTGAGTGCAGCGTCCTGGGGCGGCCCAGCTAAAGTAATAGAGAGGTaGAGGCAGGAGTCCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SNIIPSVHLSAASWGGPAKVIER*RQESQA Trigger: GGCCTGGGACTCCTGCCTGCACCTCTCTATTACTTT...AGCTGGGCCGCCCCAGGACGCTGCACTCAGATGAACAGATGGAATTATGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR TCA 90 bp | AGCAACATAATTCCATCTGTTCATCTGAGTGCAGCGTCCTGGGGCGGCCCAGCTAGACCACCTCAAACATaGAGCTGGCCTACCAACATC | + |
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Preference number: 2 (lower is better) Translates to: SNIIPSVHLSAASWGGPARPPQT*SWPTNI Trigger: GATGTTGGTAGGCCAGCTTCATGTTTGAGGTGGTCT...AGCTGGGCCGCCCCAGGACGCTGCACTCAGATGAACAGATGGAATTATGTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | GGATGTCAAAACTGTCAGTCAGTCCCAGACTGGGTGTCAGTCTGTCCATGCGCAACTGTCTCCTTGCAGTaGCTCATGAGCAGACCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GCQNCQSVPDWVSVCPCATVSLQ*LMSRPH Trigger: GTGAGGTCTGCTCATGAGCCACTGCAAGGAGACAGT...TGCGCATGGACAGACTGACACCCAGTCTGGGACTGACTGACAGTTTTGACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCCCTCAGTGGTTATCCGGCGGCCTAGGAGTAGGAAGGAAGGCGCCAACACTGATTGCCTGTCAGTaGAAATGCAATTTTATCATG | + |
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Preference number: 2 (lower is better) Translates to: RPPQWLSGGLGVGRKAPTLIACQ*KCNFIM Trigger: CATGATAAAATTGCATTTCCACTGACAGGCAATCAG...TGTTGGCGCCTTCCTTCCTACTCCTAGGCCGCCGGATAACCACTGAGGGGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR CAA 90 bp | GGGATGAATGAGTTTGGGGCCCGCAGTGGGAAATGCTGCATCCTTTaGGAGATCAGGCCAAAGGATGCCCTCTACGGTAAAATAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: GMNEFGARSGKCCIL*EIRPKDALYGKIRT Trigger: TGTCCTTATTTTACCGTAGAGGGCATCCTTTGGCCTGATCTCCAAAAGGATGCAGCATTTCCCACTGCGGGCCCCAAACTCATTCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR TCA 90 bp | TGTATTAGAAAAGATAGCACAGAAAAACTTCGGCTTCAGCTCAGCCCGACCAGGGTCCAGATCAGGCCATaGAGGTGGTGGGCAGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: CIRKDSTEKLRLQLSPTRVQIRP*RWWAES Trigger: ACTCTCTGCCCACCACCTTCATGGCCTGATCTGGAC...CCTGGTCGGGCTGAGCTGAAGCCGAAGTTTTTCTGTGCTATCTTTTCTAATACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR TCA 90 bp | AGCAACATAATTCCATCTGTTCATCTGAGTGCAGCGTCCTGGGGCGGCCCAGCTCCAATTTACAGATGCTaGGAAGTGGCTAACCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: SNIIPSVHLSAASWGGPAPIYRC*EVANLE Trigger: CTCAAGGTTAGCCACTTCTCAGCATCTGTAAATTGG...AGCTGGGCCGCCCCAGGACGCTGCACTCAGATGAACAGATGGAATTATGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGATGTCAAAACTGTCAGTCAGTCCCAGACTGGGTGTCAGTCTGTCCATGCGCAGAGCACAGATGTTaGAGTCTTTACACTATCCGC | + |
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Preference number: 2 (lower is better) Translates to: AGCQNCQSVPDWVSVCPCAEHRC*SLYTIR Trigger: GCGGATAGTGTAAAGACTCCAACATCTGTGCTCTGC...GCATGGACAGACTGACACCCAGTCTGGGACTGACTGACAGTTTTGACATCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTTCCTCACCTGTCCCCATTTCTGATCCGAGTACCAGGAAGAAGCAGAAAAGTCACTGGGACACATaGGAAACTGGAGGAAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: GSSSPVPISDPSTRKKQKSHWDT*ETGGRY Trigger: GTACCTTCCTCCAGTTTCCCATGTGTCCCAGTGACT...TTTCTGCTTCTTCCTGGTACTCGGATCAGAAATGGGGACAGGTGAGGAAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR GCA 90 bp | GACTGCACATCTTCACTGAGTCACTGGGACACATGGGAAACTGGAGGAAGGTACGTGTCAGTCTGTCCATaGGCAGTAAGTGTATCAAGG | + |
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Preference number: 2 (lower is better) Translates to: DCTSSLSHWDTWETGGRYVSVCP*AVSVSR Trigger: CCTTGATACACTTACTGCGCATGGACAGACTGACAC...GTACCTTCCTCCAGTTTCCCATGTGTCCCAGTGACTCAGTGAAGATGTGCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGATGTCAAAACTGTCAGTCAGTCCCAGACTGGGTGTCAGTCTGTCCATGCTCACATCCAATCTCGTaGCTGAAAGTGAAGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: AGCQNCQSVPDWVSVCPCSHPIS*LKVKPS Trigger: AGATGGCTTCACTTTCAGCCACGAGATTGGATGTGA...GCATGGACAGACTGACACCCAGTCTGGGACTGACTGACAGTTTTGACATCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGTGGTATACATCAGATAGTAGTCCCAGGGTCTCAGGAAGCCGAGGCAGGATCTCACAGAACCCGTaGGACATGGAATTTTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: GWWYTSDSSPRVSGSRGRISQNP*DMEFFL Trigger: CAAGAAAAATTCCATGTCCCACGGGTTCTGTGAGAT...CCTGCCTCGGCTTCCTGAGACCCTGGGACTACTATCTGATGTATACCACCAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR TCA 90 bp | AGCAACATAATTCCATCTGTTCATCTGAGTGCAGCGTCCTGGGGCGGCCCAGCTACATGGAATTTTTCTTaGCTGCTAAGAGTTAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SNIIPSVHLSAASWGGPATWNFS*LLRVRD Trigger: GTCCCTAACTCTTAGCAGTCAAGAAAAATTCCATGT...AGCTGGGCCGCCCCAGGACGCTGCACTCAGATGAACAGATGGAATTATGTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTTACCTCCTAGGGAGACACAGCAACGGAAACCTTTTGTTGTTTTTAAAAGCCACAGGTGCAGTTTaGAATCCATCTGCTGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: PAYLLGRHSNGNLLLFLKATGAV*NPSAGA Trigger: GGCGCCAGCAGATGGATTCCAAACTGCACCTGTGGC...TTTTAAAAACAACAAAAGGTTTCCGTTGCTGTGTCTCCCTAGGAGGTAAGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTTCCTCTGCCGCATCTGCCACAGATGACCTGGGTATGGCCATGCATCCCACAGATGCTGAGAAGTaGCTAACCTTGAGAAACATT | + |
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Preference number: 2 (lower is better) Translates to: FVSSAASATDDLGMAMHPTDAEK*LTLRNI Trigger: AATGTTTCTCAAGGTTAGCCACTTCTCAGCATCTGT...GGGATGCATGGCCATACCCAGGTCATCTGTGGCAGATGCGGCAGAGGAAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR GCA 90 bp | GGTTGGTGGTATACATCAGATAGTAGTCCCAGGGTCTCAGGAAGCCGAGGCAGGGCCTGTCAGTGGAAATaGAATTTTATCATGTACAAG | + |
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Preference number: 2 (lower is better) Translates to: GWWYTSDSSPRVSGSRGRACQWK*NFIMYK Trigger: CTTGTACATGATAAAATTGCATTTCCACTGACAGGC...CCTGCCTCGGCTTCCTGAGACCCTGGGACTACTATCTGATGTATACCACCAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTTCCTCTGCCGCATCTGCCACAGATGACCTGGGTATGGCCATGCATCCCCCCAAAACTCTTACCTaGTTAAAGACAGAAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: FVSSAASATDDLGMAMHPPKTLT*LKTEDK Trigger: TTTATCTTCTGTCTTTAACCAGGTAAGAGTTTTGGG...GGGATGCATGGCCATACCCAGGTCATCTGTGGCAGATGCGGCAGAGGAAACAAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR GCA 90 bp | AGTACGACAAGTTACCAATTTACAGATGCTGAGAAGTGGCTAACCTTGAGAAACAGCAATGGCAAGGTCTaGCATTCTGATGTGTTGGCG | + |
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Preference number: 2 (lower is better) Translates to: STTSYQFTDAEKWLTLRNSNGKV*HSDVLA Trigger: CGCCAACACATCAGAATGGCAGACCTTGCCATTGCT...GTTTCTCAAGGTTAGCCACTTCTCAGCATCTGTAAATTGGTAACTTGTCGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR GCA 90 bp | GACTGCACATCTTCACTGAGTCACTGGGACACATGGGAAACTGGAGGAAGGTACACACTTGGAATTTTCTaGTGTTTATTCCCGTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: DCTSSLSHWDTWETGGRYTLGIF*CLFPFF Trigger: GAAAAACGGGAATAAACAGCAGAAAATTCCAAGTGT...GTACCTTCCTCCAGTTTCCCATGTGTCCCAGTGACTCAGTGAAGATGTGCAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR CAA 90 bp | AGTACGACAAGTTACCAATTTACAGATGCTGAGAAGTGGCTAACCTaGAGAAACATTCACAATTCTGTCACTGCCCAAAGTAATAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: STTSYQFTDAEKWLT*RNIHNSVTAQSNRE Trigger: CTCTCTATTACTTTGGGCAGTGACAGAATTGTGAATGTTTCTCAAGGTTAGCCACTTCTCAGCATCTGTAAATTGGTAACTTGTCGTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAGCTACTAGGGTGTGGTACAAATATTTTGGTACTAAGATTTTAGATCAGAGTTCAAAAGCTCAATaGATCCCAAAACTCTTACCT | + |
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Preference number: 2 (lower is better) Translates to: LRATRVWYKYFGTKILDQSSKAQ*IPKLLP Trigger: AGGTAAGAGTTTTGGGATTCATTGAGCTTTTGAACT...CTGATCTAAAATCTTAGTACCAAAATATTTGTACCACACCCTAGTAGCTCTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR GCA 72 bp | GGCTTCAGCTCAGCCCGACCAGGTCAGAGCCACAGGTaGAGTTTGGAATCCATCTGCTGGCGCCCGTGGCCG | + |
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Preference number: 3 (lower is better) Translates to: GFSSARPGQSHR*SLESICWRPWP Trigger: CGGCCACGGGCGCCAGCAGATGGATTCCAAACTGCACCTGTGGCTCTGACCTGGTCGGGCTGAGCTGAAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR CCA 72 bp | GCTCAGCCCGACCAGGTCAGAGCCACAGGTGCAGTTTaGAATCCATCTGCTGGCGCCCGTGGCCGGGATGGT | + |
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Preference number: 3 (lower is better) Translates to: AQPDQVRATGAV*NPSAGARGRDG Trigger: ACCATCCCGGCCACGGGCGCCAGCAGATGGATTCCAAACTGCACCTGTGGCTCTGACCTGGTCGGGCTGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR CCA 72 bp | AACATAATTCCATCTGTTCATCTGAGTGCAGCGTCCTaGGGCGGCCCAGCTGCTGTGCGGTGGCGGCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: NIIPSVHLSAAS*GGPAAVRWRLA Trigger: TGCCAGCCGCCACCGCACAGCAGCTGGGCCGCCCCAGGACGCTGCACTCAGATGAACAGATGGAATTATGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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| 3UTR-3UTR CAA 90 bp | GCAGGATGTCAAAACTGTCAGTCAGTCCCAGACTGGGTGTCAGTCTGTCCATGCGTCACAGTGCTACCCTaGCTCCAGGCGGCACCACAC | + |
|
Preference number: 3 (lower is better) Translates to: AGCQNCQSVPDWVSVCPCVTVLP*LQAAPH Trigger: GTGTGGTGCCGCCTGGAGCAAGGGTAGCACTGTGAC...GCATGGACAGACTGACACCCAGTCTGGGACTGACTGACAGTTTTGACATCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR TCA 72 bp | TTCTCCTTGGTAGGCTCCCCAGTCCAGATCAGGCCATaGAGGTGGTGGGCAGAGAGTCCTGGGGCTATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FSLVGSPVQIRP*RWWAESPGAML Trigger: AAGCATAGCCCCAGGACTCTCTGCCCACCACCTTCATGGCCTGATCTGGACTGGGGAGCCTACCAAGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR TCA 72 bp | AGAGCCACCCTCTCACTGTCTCCTTGCAGTGGCTCATaGGCAGACCTCACTGAGAACCAAGTCCCCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RATLSLSPCSGS*ADLTENQVPSL Trigger: GAGGGAGGGGACTTGGTTCTCAGTGAGGTCTGCTCATGAGCCACTGCAAGGAGACAGTGAGAGGGTGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CCA 72 bp | GCTCTAATATCCACTCACTGCCCCTGGACAATGTGCTaGAGGCCACTCCAGGGTAGGACCAGCAGAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: ALISTHCPWTMC*RPLQGRTSRAQ Trigger: CTGTGCTCTGCTGGTCCTACCCTGGAGTGGCCTCCAGCACATTGTCCAGGGGCAGTGAGTGGATATTAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR GCA 72 bp | CGCCAGTCACTGAAGCCCAGCTTCTCAGCTTCTGCCTaGTTACCTCCTAGGGAGACACAGCAACGGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: RQSLKPSFSASA*LPPRETQQRKP Trigger: AGGTTTCCGTTGCTGTGTCTCCCTAGGAGGTAAGCAGGCAGAAGCTGAGAAGCTGGGCTTCAGTGACTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR GCA 72 bp | CACGAATACTGTGACATCAGGTCACAGTGCTACCCTTaGTCCAGGCGGCACCACACTGACAGACAGGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HEYCDIRSQCYP*SRRHHTDRQEG Trigger: GCCTTCCTGTCTGTCAGTGTGGTGCCGCCTGGAGCAAGGGTAGCACTGTGACCTGATGTCACAGTATTCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR GCA 72 bp | AGAGCTCTAATATCCACTCACTGCCCCTGGACAATGTaGTGGAGGCCACTCCAGGGTAGGACCAGCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RALISTHCPWTM*WRPLQGRTSRA Trigger: TGCTCTGCTGGTCCTACCCTGGAGTGGCCTCCAGCACATTGTCCAGGGGCAGTGAGTGGATATTAGAGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR GCA 72 bp | GAAGACAAGCAACATAATTCCATCTGTTCATCTGAGTaGAGCGTCCTGGGGCGGCCCAGCTGCTGTGCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: EDKQHNSICSSE*SVLGRPSCCAV Trigger: CACCGCACAGCAGCTGGGCCGCCCCAGGACGCTGCACTCAGATGAACAGATGGAATTATGTTGCTTGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR TCA 72 bp | GAGGAAGGGATAGATCTGCACAGGGCACGAATACTGTaGCATCAGGTCACAGTGCTACCCTTGCTCCAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: EEGIDLHRARIL*HQVTVLPLLQA Trigger: CGCCTGGAGCAAGGGTAGCACTGTGACCTGATGTCACAGTATTCGTGCCCTGTGCAGATCTATCCCTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR TCA 72 bp | CTGAGAAAGGGACATATGGGCACTCAGGGGGATGAATaGGTTTGGGGCCCGCAGTGGGAAATGCTGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRKGHMGTQGDE*VWGPQWEMLHP Trigger: AGGATGCAGCATTTCCCACTGCGGGCCCCAAACTCATTCATCCCCCTGAGTGCCCATATGTCCCTTTCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR TCA 72 bp | CTCTCTGAGAAAGGGACATATGGGCACTCAGGGGGATaGATGAGTTTGGGGCCCGCAGTGGGAAATGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSEKGTYGHSGG*MSLGPAVGNAA Trigger: TGCAGCATTTCCCACTGCGGGCCCCAAACTCATTCATCCCCCTGAGTGCCCATATGTCCCTTTCTCAGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CCA 72 bp | ACTTATCCACGACCAGCATGGAGGCCCTCAGCTATCTaGGTCCCAGTACAAAAGTGTCCTCTAGAGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TYPRPAWRPSAI*VPVQKCPLEWL Trigger: GAGCCACTCTAGAGGACACTTTTGTACTGGGACCCAGATAGCTGAGGGCCTCCATGCTGGTCGTGGATAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR TCA 72 bp | ACAGTTCACTGGGGTCACAAATCTTACCTCAGGCTCTaGCAAGACATCCCTCCCTGTCCATGCCTAAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVHWGHKSYLRL*QDIPPCPCLSL Trigger: CAGGCTTAGGCATGGACAGGGAGGGATGTCTTGTCAGAGCCTGAGGTAAGATTTGTGACCCCAGTGAACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR GCA 72 bp | TTCACAATTCTGTCACTGCCCAAAGTAATAGAGAGGTaGAGGCAGGAGTCCCAGGCCCCCTCAGTGGTTATC | + |
|
Preference number: 3 (lower is better) Translates to: FTILSLPKVIER*RQESQAPSVVI Trigger: GATAACCACTGAGGGGGCCTGGGACTCCTGCCTGCACCTCTCTATTACTTTGGGCAGTGACAGAATTGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CCA 72 bp | CACATCTTCACTGAGTCACTGGGACACATGGGAAACTaGAGGAAGGTACTGTTTGGAGCCAGGGTTGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HIFTESLGHMGN*RKVLFGARVGG Trigger: ACCACCAACCCTGGCTCCAAACAGTACCTTCCTCCAGTTTCCCATGTGTCCCAGTGACTCAGTGAAGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTTTCCTCTGCCGCATCTGCCACAGATGACCTGGGTATGGCCATGCATCCCAAAGTGAAGCCATCTTaGGATGTAGAGAGTCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FVSSAASATDDLGMAMHPKVKPS*DVESLV Trigger: CACCAGACTCTCTACATCCAAAGATGGCTTCACTTT...GGGATGCATGGCCATACCCAGGTCATCTGTGGCAGATGCGGCAGAGGAAACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR-3UTR CAA 90 bp | GACCAGCAGAGCACAGATGTTGGAGTCTTTACACTATCCGCTAGTTCAGTACGACCTCTCACTGTCTCCTaGCAGTGGCTCATGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DQQSTDVGVFTLSASSVRPLTVS*QWLMSR Trigger: TCTGCTCATGAGCCACTGCAAGGAGACAGTGAGAGG...TCGTACTGAACTAGCGGATAGTGTAAAGACTCCAACATCTGTGCTCTGCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR TCA 72 bp | ACTGTCTCCTTGCAGTGGCTCATGAGCAGACCTCACTaGGAACCAAGTCCCCTCCCTCACTTCCTAGTATTA | + |
|
Preference number: 3 (lower is better) Translates to: TVSLQWLMSRPH*EPSPLPHFLVL Trigger: TAATACTAGGAAGTGAGGGAGGGGACTTGGTTCTCAGTGAGGTCTGCTCATGAGCCACTGCAAGGAGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CCA 72 bp | ACAGCAGGATGTCAAAACTGTCAGTCAGTCCCAGACTaGGTGTCAGTCTGTCCATGCGCAGTAAGTGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: TAGCQNCQSVPD*VSVCPCAVSVS Trigger: TGATACACTTACTGCGCATGGACAGACTGACACCCAGTCTGGGACTGACTGACAGTTTTGACATCCTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CCA 72 bp | AAACTGGAGGAAGGTACTGTTTGGAGCCAGGGTTGGTaGTATACATCAGATAGTAGTCCCAGGGTCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLEEGTVWSQGW*YTSDSSPRVSG Trigger: TCCTGAGACCCTGGGACTACTATCTGATGTATACCACCAACCCTGGCTCCAAACAGTACCTTCCTCCAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CCA 72 bp | AGACATCCCTCCCTGTCCATGCCTAAGCCTGATAACTaGGGTAAGCCCAAAATGGGAGAAACGAACTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RHPSLSMPKPDN*GKPKMGETNLK Trigger: TTTCAAGTTCGTTTCTCCCATTTTGGGCTTACCCCAGTTATCAGGCTTAGGCATGGACAGGGAGGGATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CCA 72 bp | ACTGGGACACATGGGAAACTGGAGGAAGGTACTGTTTaGAGCCAGGGTTGGTGGTATACATCAGATAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TGTHGKLEEGTV*SQGWWYTSDSS Trigger: ACTACTATCTGATGTATACCACCAACCCTGGCTCCAAACAGTACCTTCCTCCAGTTTCCCATGTGTCCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTTCCTCACCTGTCCCCATTTCTGATCCGAGTACCAGGAAGAAGCAGAAAGGCAGACAAATACACTaGGAATTTTCTGCTGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GSSSPVPISDPSTRKKQKGRQIH*EFSAVY Trigger: ATAAACAGCAGAAAATTCCAAGTGTATTTGTCTGCC...TTTCTGCTTCTTCCTGGTACTCGGATCAGAAATGGGGACAGGTGAGGAAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR GCA 72 bp | GATATGGGACCGCTAGGGGCAATGACAGGTGCTGATTaGCTGTCAGTGGAAATGCAATTTTATCATGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: DMGPLGAMTGAD*LSVEMQFYHVQ Trigger: TTGTACATGATAAAATTGCATTTCCACTGACAGGCAATCAGCACCTGTCATTGCCCCTAGCGGTCCCATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CCA 72 bp | AGTACGACAAGTTACCAATTTACAGATGCTGAGAAGTaGCTAACCTTGAGAAACATTCACAATTCTGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: STTSYQFTDAEK*LTLRNIHNSVT Trigger: AGTGACAGAATTGTGAATGTTTCTCAAGGTTAGCCACTTCTCAGCATCTGTAAATTGGTAACTTGTCGTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CCA 72 bp | AAGTTCAAAAGCTCAATGAATCCCAAAACTCTTACCTaGTTAAAGACAGAAGATAAAGAGAAGTCGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KFKSSMNPKTLT*LKTEDKEKSER Trigger: CCTTTCCGACTTCTCTTTATCTTCTGTCTTTAACCAGGTAAGAGTTTTGGGATTCATTGAGCTTTTGAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CCA 72 bp | AGAACTGATTTCCCATCACTGAGAGCTACTAGGGTGTaGTACAAATATTTTGGTACTAAGATTTTAGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: RTDFPSLRATRV*YKYFGTKILDQ Trigger: CTGATCTAAAATCTTAGTACCAAAATATTTGTACCACACCCTAGTAGCTCTCAGTGATGGGAAATCAGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CAA 72 bp | AGCTCAGCCCGACCAGGTCAGAGCCACAGGTGCAGTTaGGAATCCATCTGCTGGCGCCCGTGGCCGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSARPGQSHRCS*ESICWRPWPGW Trigger: CCATCCCGGCCACGGGCGCCAGCAGATGGATTCCAAACTGCACCTGTGGCTCTGACCTGGTCGGGCTGAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTCCTCTGCCGCATCTGCCACAGATGACCTGGGTATGGCCATGCATCCCCGGCAGGAAAGCGGTTaGCCAGAGTGTTCATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FVSSAASATDDLGMAMHPRQESG*PECSSC Trigger: GCAAGATGAACACTCTGGCCAACCGCTTTCCTGCCG...GGGATGCATGGCCATACCCAGGTCATCTGTGGCAGATGCGGCAGAGGAAACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR TCA 90 bp | TGTATTAGAAAAGATAGCACAGAAAAACTTCGGCTTCAGCTCAGCCCGACCAGGGCGTCCTCCATCCCGTaGGCCGCTGTGGCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CIRKDSTEKLRLQLSPTRASSIP*AAVAVA Trigger: AGCTACAGCCACAGCGGCTCACGGGATGGAGGACGC...CCTGGTCGGGCTGAGCTGAAGCCGAAGTTTTTCTGTGCTATCTTTTCTAATACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CAA 72 bp | GAGTTTGGGGCCCGCAGTGGGAAATGCTGCATCCTTTaGGAGATCAGGCCAAAGGATGCCCTCTACGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: EFGARSGKCCIL*EIRPKDALYGK Trigger: TTTACCGTAGAGGGCATCCTTTGGCCTGATCTCCAAAAGGATGCAGCATTTCCCACTGCGGGCCCCAAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR TCA 90 bp | GGCTCTTCCTCACCTGTCCCCATTTCTGATCCGAGTACCAGGAAGAAGCAGAAACATCTTGCTGTGAATTaGCTTGAGCATTCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSSPVPISDPSTRKKQKHLAVN*LEHSSL Trigger: CAGAGAGGAATGCTCAAGTCAATTCACAGCAAGATG...TTTCTGCTTCTTCCTGGTACTCGGATCAGAAATGGGGACAGGTGAGGAAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR GCA 90 bp | GGCTCTTCCTCACCTGTCCCCATTTCTGATCCGAGTACCAGGAAGAAGCAGAAATTTCGAAGGTGGTCATaGTCTTTCAGAAACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSSPVPISDPSTRKKQKFRRWS*SFRNSS Trigger: GGAACTGTTTCTGAAAGAGCATGACCACCTTCGAAA...TTTCTGCTTCTTCCTGGTACTCGGATCAGAAATGGGGACAGGTGAGGAAGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR CCA 90 bp | GGTTGGTGGTATACATCAGATAGTAGTCCCAGGGTCTCAGGAAGCCGAGGCAGGTTGAGCATTCCTCTCTaGGAAGTCATATTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GWWYTSDSSPRVSGSRGRLSIPL*EVIFSF Trigger: AAAAGAGAATATGACTTCCCAGAGAGGAATGCTCAA...CCTGCCTCGGCTTCCTGAGACCCTGGGACTACTATCTGATGTATACCACCAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR GCA 90 bp | TGTATTAGAAAAGATAGCACAGAAAAACTTCGGCTTCAGCTCAGCCCGACCAGGAGTTCGTTTTCCAGCTaGCGAGCTTGTTTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CIRKDSTEKLRLQLSPTRSSFSS*RACFLR Trigger: TCTCAGGAAACAAGCTCGGCAGCTGGAAAACGAACT...CCTGGTCGGGCTGAGCTGAAGCCGAAGTTTTTCTGTGCTATCTTTTCTAATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| 3UTR CAA 72 bp | AGTTACCAATTTACAGATGCTGAGAAGTGGCTAACCTaGAGAAACATTCACAATTCTGTCACTGCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYQFTDAEKWLT*RNIHNSVTAQS Trigger: ACTTTGGGCAGTGACAGAATTGTGAATGTTTCTCAAGGTTAGCCACTTCTCAGCATCTGTAAATTGGTAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGCTACTAGGGTGTGGTACAAATATTTTGGTACTAAGATTTTAGATCAGGTGTTCATCTTGCTGTaGATTGACTTGAGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRATRVWYKYFGTKILDQVFILL*IDLSIP Trigger: AGGAATGCTCAAGTCAATTCACAGCAAGATGAACAC...CTGATCTAAAATCTTAGTACCAAAATATTTGTACCACACCCTAGTAGCTCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS TCA 90 bp | CTCCATCCCGTGAGCCGCTGTGGCTGTAGCTCGTACAGAGTTTACTaGAGGAAACGAGTTTCAGGTCAAGTTCGTTTTCCAGCTGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHPVSRCGCSSYRVY*RKRVSGQVRFPAAE Trigger: CTCGGCAGCTGGAAAACGAACTTGACCTGAAACTCGTTTCCTTCAGTAAACTCTGTACGAGCTACAGCCACAGCGGCTCACGGGATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR CAA 90 bp | GGCTCTTCCTCACCTGTCCCCATTTCTGATCCGAGTACCAGGAAGAAGCAGAAAACGGCAGGAAAGCGGTaGGCCAGAGTGTTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSSSPVPISDPSTRKKQKTAGKR*ARVFIL Trigger: CAAGATGAACACTCTGGCCAACCGCTTTCCTGCCGT...TTTCTGCTTCTTCCTGGTACTCGGATCAGAAATGGGGACAGGTGAGGAAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR CAA 90 bp | ACACATGGGAAACTGGAGGAAGGTACTGTTTGGAGCCAGGGTTGGTGGTATACAGTGTACTCTGCCATTTaGTCGTTTACTCCTGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: THGKLEEGTVWSQGWWYTVYSAI*SFTPVS Trigger: GCTTACAGGAGTAAACGACAAAATGGCAGAGTACAC...TGTATACCACCAACCCTGGCTCCAAACAGTACCTTCCTCCAGTTTCCCATGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR CAA 90 bp | CCTGCTTACCTCCTAGGGAGACACAGCAACGGAAACCTTTTGTTGTTTTTAAAATTCCAGCTGCCGAGCTaGTTTCCTGAGATCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAYLLGRHSNGNLLLFLKFQLPS*FPEIFP Trigger: TGGGAAGATCTCAGGAAACAAGCTCGGCAGCTGGAA...TTTTAAAAACAACAAAAGGTTTCCGTTGCTGTGTCTCCCTAGGAGGTAAGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR CAA 90 bp | CCTGCTTACCTCCTAGGGAGACACAGCAACGGAAACCTTTTGTTGTTTTTAAAACCTAAGGTTGATCCTTaGTATCAGGCTGTTCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAYLLGRHSNGNLLLFLKPKVDP*YQAVHG Trigger: GCCGTGAACAGCCTGATACAAAGGATCAACCTTAGG...TTTTAAAAACAACAAAAGGTTTCCGTTGCTGTGTCTCCCTAGGAGGTAAGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS-3UTR CAA 90 bp | CCTGCTTACCTCCTAGGGAGACACAGCAACGGAAACCTTTTGTTGTTTTTAAAACGCCGTTTCCTAAGGTaGATCCTTTGTATCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAYLLGRHSNGNLLLFLKRRFLR*ILCIRL Trigger: CAGCCTGATACAAAGGATCAACCTTAGGAAACGGCG...TTTTAAAAACAACAAAAGGTTTCCGTTGCTGTGTCTCCCTAGGAGGTAAGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS CAA 90 bp | CCAATGACACCTCCAAGGATGAGCGAGTCACGCCGTTTCCTAAGGTaGATCCTTTGTATCAGGCTGTTCACGGCAGGAAAGCGGTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PMTPPRMSESRRFLR*ILCIRLFTAGKRLA Trigger: GGCCAACCGCTTTCCTGCCGTGAACAGCCTGATACAAAGGATCAACCTTAGGAAACGGCGTGACTCGCTCATCCTTGGAGGTGTCATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS CAA 72 bp | GATGAGCGAGTCACGCCGTTTCCTAAGGTTGATCCTTaGTATCAGGCTGTTCACGGCAGGAAAGCGGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DERVTPFPKVDP*YQAVHGRKAVG Trigger: GCCAACCGCTTTCCTGCCGTGAACAGCCTGATACAAAGGATCAACCTTAGGAAACGGCGTGACTCGCTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS CAA 90 bp | ACCTCCAAGGATGAGCGAGTCACGCCGTTTCCTAAGGTTGATCCTTaGTATCAGGCTGTTCACGGCAGGAAAGCGGTTGGCCAGAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TSKDERVTPFPKVDP*YQAVHGRKAVGQSV Trigger: AACACTCTGGCCAACCGCTTTCCTGCCGTGAACAGCCTGATACAAAGGATCAACCTTAGGAAACGGCGTGACTCGCTCATCCTTGGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS CAA 72 bp | CCTCCAAGGATGAGCGAGTCACGCCGTTTCCTAAGGTaGATCCTTTGTATCAGGCTGTTCACGGCAGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PPRMSESRRFLR*ILCIRLFTAGK Trigger: CTTTCCTGCCGTGAACAGCCTGATACAAAGGATCAACCTTAGGAAACGGCGTGACTCGCTCATCCTTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS TCA 72 bp | GTGAGCCGCTGTGGCTGTAGCTCGTACAGAGTTTACTaGAGGAAACGAGTTTCAGGTCAAGTTCGTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VSRCGCSSYRVY*RKRVSGQVRFP Trigger: TGGAAAACGAACTTGACCTGAAACTCGTTTCCTTCAGTAAACTCTGTACGAGCTACAGCCACAGCGGCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS CAA 72 bp | GAGTTTCAGGTCAAGTTCGTTTTCCAGCTGCCGAGCTaGTTTCCTGAGATCTTCCCAGTAATTGCTGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EFQVKFVFQLPS*FPEIFPVIAGS Trigger: GGAACCAGCAATTACTGGGAAGATCTCAGGAAACAAGCTCGGCAGCTGGAAAACGAACTTGACCTGAAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS GCA 72 bp | TCTTCTATCAGACGATCAGAGTTTCGAAGGTGGTCATaGTCTTTCAGAAACAGTTCCGTTCTCCTGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSIRRSEFRRWS*SFRNSSVLLLF Trigger: AAACAACAGGAGAACGGAACTGTTTCTGAAAGAGCATGACCACCTTCGAAACTCTGATCGTCTGATAGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
||
| CDS CCA 72 bp | ATTGTTTCTTCTATCAGACGATCAGAGTTTCGAAGGTaGTCATGCTCTTTCAGAAACAGTTCCGTTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: IVSSIRRSEFRR*SCSFRNSSVLL Trigger: CAGGAGAACGGAACTGTTTCTGAAAGAGCATGACCACCTTCGAAACTCTGATCGTCTGATAGAAGAAACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010536.9 |
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