Pregenerated sensors for GORASP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014959Ensembl transcript IDs: ENSMUST00000028509.11, ENSMUST00000112201.8, ENSMUST00000112205.2, ENSMUST00000133432.8
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACATGGATGTTGAAAGGAGCAGAGGCTGCCAGGACGACATCACGTTaGGGGTGGGAGATGTGGTTGGTTTTCCGGATGGCCACCATCTTT | + |
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Preference number: 1 (lower is better) Translates to: TWMLKGAEAARTTSR*GWEMWLVFRMATIF Trigger: AAAGATGGTGGCCATCCGGAAAACCAACCACATCTCCCACCCTCAACGTGATGTCGTCCTGGCAGCCTCTGCTCCTTTCAACATCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR CCA 90 bp | GCACAGTTCTCATCCCTGGGTTGGAGTTTATTGGGAGTAGTTTACTaGGAGAGTTTTGAACTTAGCTCATGGGCTAAGTCCTCAGCATAC | + |
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Preference number: 1 (lower is better) Translates to: AQFSSLGWSLLGVVY*ESFELSSWAKSSAY Trigger: GTATGCTGAGGACTTAGCCCATGAGCTAAGTTCAAAACTCTCCCAGTAAACTACTCCCAATAAACTCCAACCCAGGGATGAGAACTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR CCA 90 bp | GTTCAATTAATAGTGTGCCATGGACCGGAACAAAACATCTGCAACTaGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: VQLIVCHGPEQNICN*EFCVNRNRDATHRD Trigger: GTCTCTGTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCAGATGTTTTGTTCCGGTCCATGGCACACTATTAATTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| 3UTR GCA 90 bp | AAAGATGTTCAATTAATAGTGTGCCATGGACCGGAACAAAACATCTaGAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCAC | + |
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Preference number: 1 (lower is better) Translates to: KDVQLIVCHGPEQNI*NWEFCVNRNRDATH Trigger: GTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCAGATGTTTTGTTCCGGTCCATGGCACACTATTAATTGAACATCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| 3UTR-3UTR CCA 90 bp | ACACAAGGCATAGCAGTGGTACAGGGAACCCAGTGGGTACCCCGCCATCTCTCTACGGCAGTAGATGCCTaGCAGCAAGCCACCCATGAC | + |
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Preference number: 2 (lower is better) Translates to: TQGIAVVQGTQWVPRHLSTAVDA*QQATHD Trigger: GTCATGGGTGGCTTGCTGCCAGGCATCTACTGCCGT...AGAGAGATGGCGGGGTACCCACTGGGTTCCCTGTACCACTGCTATGCCTTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| 3UTR CAA 90 bp | CACATGGATGTTGAAAGGAGCAGAGGCTGCCAGGACGACATCACGTaGAGGGTGGGAGATGTGGTTGGTTTTCCGGATGGCCACCATCTT | + |
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Preference number: 2 (lower is better) Translates to: HMDVERSRGCQDDIT*RVGDVVGFPDGHHL Trigger: AAGATGGTGGCCATCCGGAAAACCAACCACATCTCCCACCCTCAACGTGATGTCGTCCTGGCAGCCTCTGCTCCTTTCAACATCCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTTCAATTAATAGTGTGCCATGGACCGGAACAAAACATCTGCAACTGGGAGCAGAACGGCAGTAGATaGCTGGCAGCAAGCCACCCA | + |
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Preference number: 2 (lower is better) Translates to: DVQLIVCHGPEQNICNWEQNGSR*LAASHP Trigger: TGGGTGGCTTGCTGCCAGGCATCTACTGCCGTTCTG...CTCCCAGTTGCAGATGTTTTGTTCCGGTCCATGGCACACTATTAATTGAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTTCCTTGTACAGTTTAGTGAGGTGGTCTGTGTTCTTGCAAACGACTTACAACAGAACGGCAGTAGATaGCTGGCAGCAAGCCACCCA | + |
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Preference number: 2 (lower is better) Translates to: CFLVQFSEVVCVLANDLQQNGSR*LAASHP Trigger: TGGGTGGCTTGCTGCCAGGCATCTACTGCCGTTCTG...TTGTAAGTCGTTTGCAAGAACACAGACCACCTCACTAAACTGTACAAGGAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTACACTGTGGCTCTTACCTGGTGTTGCAAGCCATTTCGTTTGTTTGTTTACCATCTTTTCCTTCTaGAACTGTAAGCCAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: TVTLWLLPGVASHFVCLFTIFSF*NCKPAS Trigger: TGAGGCTGGCTTACAGTTTCAGAAGGAAAAGATGGT...AAACAAACAAACGAAATGGCTTGCAACACCAGGTAAGAGCCACAGTGTAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTACACTGTGGCTCTTACCTGGTGTTGCAAGCCATTTCGTTTGTTTGTTTCAGGTAAATTCCTTATaGATACTCAGGACAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TVTLWLLPGVASHFVCLFQVNSL*ILRTSR Trigger: CCTGCTTGTCCTGAGTATGCATAAGGAATTTACCTG...AAACAAACAAACGAAATGGCTTGCAACACCAGGTAAGAGCCACAGTGTAACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAACATCTGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACTACAGTTTAGTGAGGTaGTCTGTGTTCTTGCAAACG | + |
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Preference number: 2 (lower is better) Translates to: QNICNWEFCVNRNRDATHYSLVR*SVFLQT Trigger: CGTTTGCAAGAACACAGACCACCTCACTAAACTGTA...GTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCAGATGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| 3UTR-3UTR TCA 90 bp | CACACTGTCTGTTTAAGATGCTGCTGGAATTATAGAGAATGTAGCCAAACAGTATCTACCCATTTGTCTTaGGGTGCTAGCTGTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: HTVCLRCCWNYRECSQTVSTHLS*GASCFL Trigger: AAGAAAACAGCTAGCACCTCAAGACAAATGGGTAGA...TACTGTTTGGCTACATTCTCTATAATTCCAGCAGCATCTTAAACAGACAGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACAGAGACCAAAAGAAATGTTGCATGTaGGCACTAGGCATAAAATAT | + |
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Preference number: 2 (lower is better) Translates to: CNWEFCVNRNRDATHRDQKKCCM*ALGIKY Trigger: ATATTTTATGCCTAGTGCCCACATGCAACATTTCTT...TTGGTCTCTGTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAGAGTATCGGAGATAACGTACCCATGTCTTCTAAGTTTTTCCAAATGTAGAATGTCCATGTTACTCTaGCAGTTTCTACCCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: IRVSEITYPCLLSFSKCRMSMLL*QFLPIC Trigger: ACAAATGGGTAGAAACTGCCAGAGTAACATGGACAT...TCTACATTTGGAAAAACTTAGAAGACATGGGTACGTTATCTCCGATACTCTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR TCA 72 bp | AACCCAGTGGGTACCCCGCCATCTCTCTTCCAAAGATaGACCTCCCAGAACGGCAGTAGATGCCTGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: NPVGTPPSLFQR*TSQNGSRCLAA Trigger: TGCTGCCAGGCATCTACTGCCGTTCTGGGAGGTTCATCTTTGGAAGAGAGATGGCGGGGTACCCACTGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| 3UTR TCA 72 bp | TTGAAAGGAGCAGAGGCTGCCAGGACGACATCACGTTaGGGGTGGGAGATGTGGTTGGTTTTCCGGATGGCC | + |
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Preference number: 3 (lower is better) Translates to: LKGAEAARTTSR*GWEMWLVFRMA Trigger: GGCCATCCGGAAAACCAACCACATCTCCCACCCTCAACGTGATGTCGTCCTGGCAGCCTCTGCTCCTTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR CCA 72 bp | CACGTTGAGGGTGGGAGATGTGGTTGGTTTTCCGGATaGCCACCATCTTTTCCTTCTGAAACTGTAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: HVEGGRCGWFSG*PPSFPSETVSQ Trigger: CTGGCTTACAGTTTCAGAAGGAAAAGATGGTGGCCATCCGGAAAACCAACCACATCTCCCACCCTCAACGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR GCA 72 bp | TTTAATAAACACATGGATGTTGAAAGGAGCAGAGGCTaGCAGGACGACATCACGTTGAGGGTGGGAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: FNKHMDVERSRG*QDDITLRVGDV Trigger: CACATCTCCCACCCTCAACGTGATGTCGTCCTGGCAGCCTCTGCTCCTTTCAACATCCATGTGTTTATTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR CCA 72 bp | TCATCCCTGGGTTGGAGTTTATTGGGAGTAGTTTACTaGGAGAGTTTTGAACTTAGCTCATGGGCTAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: SSLGWSLLGVVY*ESFELSSWAKS Trigger: GGACTTAGCCCATGAGCTAAGTTCAAAACTCTCCCAGTAAACTACTCCCAATAAACTCCAACCCAGGGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGTTACACTGTGGCTCTTACCTGGTGTTGCAAGCCATTTCGTTTGTTTGTTTATAAACACATGGATGTaGAAAGGAGCAGAGGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: TVTLWLLPGVASHFVCLFINTWM*KGAEAA Trigger: GGCAGCCTCTGCTCCTTTCAACATCCATGTGTTTAT...AAACAAACAAACGAAATGGCTTGCAACACCAGGTAAGAGCCACAGTGTAACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCTACCCATTTGTCTTGAGGTGCTAGCTGTTTTCTTGTCTTCTGGAGTCATCGTTCTCATCCCTGGGTaGGAGTTTATTGGGAGTAGT | + |
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Preference number: 3 (lower is better) Translates to: FLPICLEVLAVFLSSGVIVLIPG*EFIGSS Trigger: ACTACTCCCAATAAACTCCAACCCAGGGATGAGAAC...GATGACTCCAGAAGACAAGAAAACAGCTAGCACCTCAAGACAAATGGGTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR TCA 72 bp | GTCCATGTTACTCTGGCAGTTTCTACCCATTTGTCTTaGGGTGCTAGCTGTTTTCTTGTCTTCTGGAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: VHVTLAVSTHLS*GASCFLVFWSH Trigger: ATGACTCCAGAAGACAAGAAAACAGCTAGCACCTCAAGACAAATGGGTAGAAACTGCCAGAGTAACATGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR GCA 72 bp | TTTTCTTGTCTTCTGGAGTCATCACTGCAGATAAAGTaGACAGTTCTCATCCCTGGGTTGGAGTTTATTGGG | + |
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Preference number: 3 (lower is better) Translates to: FSCLLESSLQIK*TVLIPGLEFIG Trigger: CCCAATAAACTCCAACCCAGGGATGAGAACTGTGCACTTTATCTGCAGTGATGACTCCAGAAGACAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| 3UTR CCA 72 bp | ATAGTGTGCCATGGACCGGAACAAAACATCTGCAACTaGGAGTTTTGTGTAAACCGTAATAGAGATGCGACT | + |
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Preference number: 3 (lower is better) Translates to: IVCHGPEQNICN*EFCVNRNRDAT Trigger: AGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCAGATGTTTTGTTCCGGTCCATGGCACACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR GCA 90 bp | TCCAAAGATGAACCTCCCAGAACGGCAGTAGATGCCTGGCAGCAAGCCACCCATCGTGGTAGCCCTCGGTaGCGCCGCCCGGGATCTCGA | + |
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Preference number: 4 (lower is better) Translates to: SKDEPPRTAVDAWQQATHRGSPR*RRPGSR Trigger: TCGAGATCCCGGGCGGCGGCACCGAGGGCTACCACG...ATGGGTGGCTTGCTGCCAGGCATCTACTGCCGTTCTGGGAGGTTCATCTTTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028509.11 |
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| CDS-3UTR GCA 90 bp | CATGGTGCAGACAACAGGCTATCCCTGCCAGCCGCCCCTAACATGTACAGTTACCGTGGTAGCCCTCGGTaGCGCCGCCCGGGATCTCGA | + |
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Preference number: 4 (lower is better) Translates to: HGADNRLSLPAAPNMYSYRGSPR*RRPGSR Trigger: TCGAGATCCCGGGCGGCGGCACCGAGGGCTACCACG...GTAACTGTACATGTTAGGGGCGGCTGGCAGGGATAGCCTGTTGTCTGCACCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| CDS-3UTR CCA 90 bp | GAACCCAGTGGGTACCCCGCCATCTCTCTTCCAAAGATGAACCTCCCAGAACGGGCGGCTCCCCTGCGCTaGCTGCAGAAGAGCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EPSGYPAISLPKMNLPERAAPLR*LQKSPL Trigger: CAGAGGGCTCTTCTGCAGCCAGCGCAGGGGAGCCGC...CCGTTCTGGGAGGTTCATCTTTGGAAGAGAGATGGCGGGGTACCCACTGGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR TCA 90 bp | GAACCCAGTGGGTACCCCGCCATCTCTCTTCCAAAGATGAACCTCCCAGAACGGAACCGACCCCTGGCATaGTGTGCGGAGCAGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: EPSGYPAISLPKMNLPERNRPLA*CAEQGG Trigger: ACCTCCCTGCTCCGCACATCATGCCAGGGGTCGGTT...CCGTTCTGGGAGGTTCATCTTTGGAAGAGAGATGGCGGGGTACCCACTGGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CCA 90 bp | ACACAAGGCATAGCAGTGGTACAGGGAACCCAGTGGGTACCCCGCCATCTCTCTCAAGGAGGGAAGAGGTaGCAAACCCGGGCTCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: TQGIAVVQGTQWVPRHLSQGGKR*QTRAPE Trigger: CTCGGGAGCCCGGGTTTGCCACCTCTTCCCTCCTTG...AGAGAGATGGCGGGGTACCCACTGGGTTCCCTGTACCACTGCTATGCCTTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR GCA 90 bp | GAACCCAGTGGGTACCCCGCCATCTCTCTTCCAAAGATGAACCTCCCAGAACGGGCTGACAGCTGGTGGTaGCGAGCTAATGGAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: EPSGYPAISLPKMNLPERADSWW*RANGES Trigger: GGACTCTCCATTAGCTCGGCACCACCAGCTGTCAGC...CCGTTCTGGGAGGTTCATCTTTGGAAGAGAGATGGCGGGGTACCCACTGGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR GCA 90 bp | GAACCCAGTGGGTACCCCGCCATCTCTCTTCCAAAGATGAACCTCCCAGAACGGTGGGGAGAGGTGCAATaGCAGGTAAGTTTCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: EPSGYPAISLPKMNLPERWGEVQ*QVSFGE Trigger: CTCCCCGAAACTTACCTGGCATTGCACCTCTCCCCA...CCGTTCTGGGAGGTTCATCTTTGGAAGAGAGATGGCGGGGTACCCACTGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATGAACCTCCCAGAACGGCAGTAGATGCCTGGCAGCAAGCCACCCATGGAAGTCGGACAGCATaGGGAGAGGTGCAATGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SKDEPPRTAVDAWQQATHGSRTA*GEVQCQ Trigger: CTGGCATTGCACCTCTCCCCATGCTGTCCGACTTCC...ATGGGTGGCTTGCTGCCAGGCATCTACTGCCGTTCTGGGAGGTTCATCTTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CCA 90 bp | ACACAAGGCATAGCAGTGGTACAGGGAACCCAGTGGGTACCCCGCCATCTCTCTCTCTGTCCTCAACAGTaGTGGGGACCTTGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TQGIAVVQGTQWVPRHLSLCPQQ*WGPWKQ Trigger: CTGCTTCCAAGGTCCCCACCACTGTTGAGGACAGAG...AGAGAGATGGCGGGGTACCCACTGGGTTCCCTGTACCACTGCTATGCCTTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| 3UTR CAA 72 bp | GTTGAAAGGAGCAGAGGCTGCCAGGACGACATCACGTaGAGGGTGGGAGATGTGGTTGGTTTTCCGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: VERSRGCQDDIT*RVGDVVGFPDG Trigger: GCCATCCGGAAAACCAACCACATCTCCCACCCTCAACGTGATGTCGTCCTGGCAGCCTCTGCTCCTTTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| CDS-3UTR TCA 90 bp | ACACAAGGCATAGCAGTGGTACAGGGAACCCAGTGGGTACCCCGCCATCTCTCTAGATGGAGGACTGACTaGAGACAGCTGGACCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TQGIAVVQGTQWVPRHLSRWRTD*RQLDLC Trigger: ACAGAGGTCCAGCTGTCTTCAGTCAGTCCTCCATCT...AGAGAGATGGCGGGGTACCCACTGGGTTCCCTGTACCACTGCTATGCCTTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR TCA 90 bp | GCCCTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTACAGGCGGAGCAGGGAGGTTaGAGTTGGAGAGGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: ALSLLRSFPLELCTGHLQAEQGG*SWRGWG Trigger: TCCCCAGCCTCTCCAACTTCAACCTCCCTGCTCCGC...CTGTAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CCA 90 bp | ACACAAGGCATAGCAGTGGTACAGGGAACCCAGTGGGTACCCCGCCATCTCTCTGCCAAACGTTTTCGTTaGCCCCGTCAAAGCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TQGIAVVQGTQWVPRHLSAKRFR*PRQSCR Trigger: TCTGCAGCTTTGACGGGGCCAACGAAAACGTTTGGC...AGAGAGATGGCGGGGTACCCACTGGGTTCCCTGTACCACTGCTATGCCTTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATGAACCTCCCAGAACGGCAGTAGATGCCTGGCAGCAAGCCACCCATTGTCCTCAACAGTGGTaGGGACCTTGGAAGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SKDEPPRTAVDAWQQATHCPQQW*GPWKQE Trigger: CTCCTGCTTCCAAGGTCCCCACCACTGTTGAGGACA...ATGGGTGGCTTGCTGCCAGGCATCTACTGCCGTTCTGGGAGGTTCATCTTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CCA 90 bp | AGAGGCTGCCAGGACGACATCACGTTGAGGGTGGGAGATGTGGTTGGTTTTCCGCAGGCTTCTCAACGTTaGCTTTCAGCAGATCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RGCQDDITLRVGDVVGFPQASQR*LSADPS Trigger: TGAAGGATCTGCTGAAAGCCAACGTTGAGAAGCCTG...CGGAAAACCAACCACATCTCCCACCCTCAACGTGATGTCGTCCTGGCAGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| CDS-3UTR TCA 90 bp | TGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACAGAGACCAAACAAGTTGCTCGGTGTaGCCGAGGCCTCCCGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CNWEFCVNRNRDATHRDQTSCSV*PRPPAA Trigger: AGCTGCGGGAGGCCTCGGTCACACCGAGCAACTTGT...TTGGTCTCTGTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR TCA 90 bp | CTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTACAGATAACAAGTTGCTCGGTGTaGCCGAGGCCTCCCGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LSLLRSFPLELCTGHLQITSCSV*PRPPAA Trigger: AGCTGCGGGAGGCCTCGGTCACACCGAGCAACTTGT...TATCTGTAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR TCA 90 bp | GATGTTCAATTAATAGTGTGCCATGGACCGGAACAAAACATCTGCAACTGGGAGGCGGAGCAGGGAGGTTaGAGTTGGAGAGGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: DVQLIVCHGPEQNICNWEAEQGG*SWRGWG Trigger: TCCCCAGCCTCTCCAACTTCAACCTCCCTGCTCCGC...CTCCCAGTTGCAGATGTTTTGTTCCGGTCCATGGCACACTATTAATTGAACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR TCA 90 bp | CAAGCCCTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTAACGTCACATCCACAGTaGGGGAAGAGGCGTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: QALSLLRSFPLELCTGHLTSHPQ*GKRRLP Trigger: AGGCAGACGCCTCTTCCCTCACTGTGGATGTGACGT...TAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAGGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR TCA 90 bp | GATGTTCAATTAATAGTGTGCCATGGACCGGAACAAAACATCTGCAACTGGGAGCCGGGGTGCAGTCGCTaGCTCTGTCCTCAACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: DVQLIVCHGPEQNICNWEPGCSR*LCPQQW Trigger: CCACTGTTGAGGACAGAGTCAGCGACTGCACCCCGG...CTCCCAGTTGCAGATGTTTTGTTCCGGTCCATGGCACACTATTAATTGAACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATGAACCTCCCAGAACGGCAGTAGATGCCTGGCAGCAAGCCACCCATCAGGCTTCTCAACGTTaGCTTTCAGCAGATCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SKDEPPRTAVDAWQQATHQASQR*LSADPS Trigger: TGAAGGATCTGCTGAAAGCCAACGTTGAGAAGCCTG...ATGGGTGGCTTGCTGCCAGGCATCTACTGCCGTTCTGGGAGGTTCATCTTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CCA 90 bp | ACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCAGACCTGCGGCTCCCCTGCGCTaGCTGCAGAAGAGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDTVHTSMKSMVVCDSRPAAPLR*LQKSPL Trigger: CAGAGGGCTCTTCTGCAGCCAGCGCAGGGGAGCCGC...AGGTCTGGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCGCCCCTAACATGTACAGTTACACTGTGGCTCTTACCTGGTGTTGCAAGCCGGTATCAGCTCCAATaGTGTAATCACTGTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPPLTCTVTLWLLPGVASRYQLQ*CNHCEV Trigger: GACCTCACAGTGATTACATCATTGGAGCTGATACCG...GCTTGCAACACCAGGTAAGAGCCACAGTGTAACTGTACATGTTAGGGGCGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR TCA 90 bp | CACACTAGTATGAAATCAATGGTAGTTTGCGATTCCAGACCTGACCCCGTGGTTACGTCACATCCACAGTaGGGGAAGAGGCGTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTSMKSMVVCDSRPDPVVTSHPQ*GKRRLP Trigger: AGGCAGACGCCTCTTCCCTCACTGTGGATGTGACGT...AACCACGGGGTCAGGTCTGGAATCGCAAACTACCATTGATTTCATACTAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGGGTGGGAGATGTGGTTGGTTTTCCGGATGGCCACCATCTTTTCCTTCTGTCCACTTCCAGCACATaGCAAACGTTTTCGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRVGDVVGFPDGHHLFLLSTSST*QTFSLA Trigger: GGCCAACGAAAACGTTTGGCATGTGCTGGAAGTGGA...CAGAAGGAAAAGATGGTGGCCATCCGGAAAACCAACCACATCTCCCACCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR CCA 90 bp | ACACAAGGCATAGCAGTGGTACAGGGAACCCAGTGGGTACCCCGCCATCTCTCTACCAGTCATTTGTCCTaGAAGGGAAATCTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQGIAVVQGTQWVPRHLSTSHLS*KGNLLS Trigger: GGAAAGAAGATTTCCCTTCCAGGACAAATGACTGGT...AGAGAGATGGCGGGGTACCCACTGGGTTCCCTGTACCACTGCTATGCCTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTACAGATAGACAGGGTCAGAAGGTaGGCCCATGGCAGGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLLRSFPLELCTGHLQIDRVRR*AHGRKG Trigger: TCCCTTCCTGCCATGGGCCCACCTTCTGACCCTGTC...TATCTGTAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | GATGTTCAATTAATAGTGTGCCATGGACCGGAACAAAACATCTGCAACTGGGAGGACAGGGTCAGAAGGTaGGCCCATGGCAGGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DVQLIVCHGPEQNICNWEDRVRR*AHGRKG Trigger: TCCCTTCCTGCCATGGGCCCACCTTCTGACCCTGTC...CTCCCAGTTGCAGATGTTTTGTTCCGGTCCATGGCACACTATTAATTGAACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCAGACCTAACCGACCCCTGGCATaGTGTGCGGAGCAGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TDTVHTSMKSMVVCDSRPNRPLA*CAEQGG Trigger: ACCTCCCTGCTCCGCACATCATGCCAGGGGTCGGTT...AGGTCTGGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR TCA 90 bp | ACACCTACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCCCGGGGTGCAGTCGCTaGCTCTGTCCTCAACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTDTVHTSMKSMVVCDSPGCSR*LCPQQW Trigger: CCACTGTTGAGGACAGAGTCAGCGACTGCACCCCGG...GGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGTAGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCGCCCCTAACATGTACAGTTACACTGTGGCTCTTACCTGGTGTTGCAAGCAATAACCATAGCCAATaGCACATCCAAGGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPPLTCTVTLWLLPGVASNNHSQ*HIQGCL Trigger: AAGGCAGCCTTGGATGTGGCATTGGCTATGGTTATT...GCTTGCAACACCAGGTAAGAGCCACAGTGTAACTGTACATGTTAGGGGCGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR GCA 90 bp | CTACCCATTTGTCTTGAGGTGCTAGCTGTTTTCTTGTCTTCTGGAGTCATCACTGCTGACAGCTGGTGGTaGCGAGCTAATGGAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPICLEVLAVFLSSGVITADSWW*RANGES Trigger: GGACTCTCCATTAGCTCGGCACCACCAGCTGTCAGC...AGTGATGACTCCAGAAGACAAGAAAACAGCTAGCACCTCAAGACAAATGGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR GCA 90 bp | CACACTAGTATGAAATCAATGGTAGTTTGCGATTCCAGACCTGACCCCGTGGTTTGGGGAGAGGTGCAATaGCAGGTAAGTTTCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTSMKSMVVCDSRPDPVVWGEVQ*QVSFGE Trigger: CTCCCCGAAACTTACCTGGCATTGCACCTCTCCCCA...AACCACGGGGTCAGGTCTGGAATCGCAAACTACCATTGATTTCATACTAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGTGCACTTTAATAAACACATGGATGTTGAAAGGAGCAGAGGCTGCCAGGTCCAGCTCTGTGTCCTaGGGAGTTTTCCTGTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVCTLINTWMLKGAEAARSSSVS*GVFLYP Trigger: CGGGTACAGGAAAACTCCCCAGGACACAGAGCTGGA...CCTGGCAGCCTCTGCTCCTTTCAACATCCATGTGTTTATTAAAGTGCACACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR CCA 90 bp | ACACCTACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCCAAGGAGGGAAGAGGTaGCAAACCCGGGCTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPTDTVHTSMKSMVVCDSQGGKR*QTRAPE Trigger: CTCGGGAGCCCGGGTTTGCCACCTCTTCCCTCCTTG...GGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGTAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR GCA 90 bp | CAAAACATCTGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACGCTGACAGCTGGTGGTaGCGAGCTAATGGAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QNICNWEFCVNRNRDATHADSWW*RANGES Trigger: GGACTCTCCATTAGCTCGGCACCACCAGCTGTCAGC...GTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCAGATGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCAGACCTCAGAAGGTGGGCCCATaGCAGGAAGGGAAGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TDTVHTSMKSMVVCDSRPQKVGP*QEGKTA Trigger: CGCTGTCTTCCCTTCCTGCCATGGGCCCACCTTCTG...AGGTCTGGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCGCCCCTAACATGTACAGTTACACTGTGGCTCTTACCTGGTGTTGCAAGCGAGTCACCTTGTTCATaGTTCTCTTCACAGCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QPPLTCTVTLWLLPGVASESPCS*FSSQQY Trigger: ATACTGCTGTGAAGAGAACCATGAACAAGGTGACTC...GCTTGCAACACCAGGTAAGAGCCACAGTGTAACTGTACATGTTAGGGGCGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTTAAGATTGAGGGTAATAACATAGCTGCTTTACTTAAAAGGCAGGTAACAAGTTGCTCGGTGTaGCCGAGGCCTCCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLKIEGNNIAALLKRQVTSCSV*PRPPAA Trigger: AGCTGCGGGAGGCCTCGGTCACACCGAGCAACTTGT...TACCTGCCTTTTAAGTAAAGCAGCTATGTTATTACCCTCAATCTTAAGGGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTACAGATAAGATGGAGGACTGACTaGAGACAGCTGGACCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLRSFPLELCTGHLQIRWRTD*RQLDLC Trigger: ACAGAGGTCCAGCTGTCTTCAGTCAGTCCTCCATCT...TATCTGTAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGTCTTCTGGAGTCATCACTGCAGATAAAGTGCACAGTTCTCATCCCTGGTGTAGTTCCTGGTGGTaGCAAAGATGGAGGACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSSGVITADKVHSSHPWCSSWW*QRWRTD Trigger: GTCAGTCCTCCATCTTTGTCACCACCAGGAACTACA...CCAGGGATGAGAACTGTGCACTTTATCTGCAGTGATGACTCCAGAAGACAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR GCA 90 bp | CTACCCATTTGTCTTGAGGTGCTAGCTGTTTTCTTGTCTTCTGGAGTCATCACTGCCTTCTCCGCCCCATaGAGAGTTTGGTGTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPICLEVLAVFLSSGVITAFSAP*RVWCDD Trigger: ATCATCACACCAAACTCTGCATGGGGCGGAGAAGGC...AGTGATGACTCCAGAAGACAAGAAAACAGCTAGCACCTCAAGACAAATGGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTACAGAATAACCATAGCCAATaGCACATCCAAGGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSLLRSFPLELCTGHLQNNHSQ*HIQGCL Trigger: AAGGCAGCCTTGGATGTGGCATTGGCTATGGTTATT...CTGTAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR GCA 90 bp | TACAGGACACCTACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCACCCCTGGCATGATGTaGGGAGCAGGGAGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YRTPTDTVHTSMKSMVVCTPGMM*GAGRLK Trigger: CTTCAACCTCCCTGCTCCGCACATCATGCCAGGGGT...GCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGTAGGTGTCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR GCA 90 bp | ACACCTACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCACCCCTGGCATGATGTaGGGAGCAGGGAGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPTDTVHTSMKSMVVCDSTPGMM*GAGRLK Trigger: CTTCAACCTCCCTGCTCCGCACATCATGCCAGGGGT...GGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGTAGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | TGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACAGAGACCAAGCCAAACGTTTTCGTTaGCCCCGTCAAAGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CNWEFCVNRNRDATHRDQAKRFR*PRQSCR Trigger: TCTGCAGCTTTGACGGGGCCAACGAAAACGTTTGGC...TTGGTCTCTGTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCCCTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTAGGACTGGTTTACTTGTaGCGGCAACAATGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QALSLLRSFPLELCTGHLGLVYL*RQQWYS Trigger: ACTGTACCATTGTTGCCGCCACAAGTAAACCAGTCC...TAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAGGGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCTTGTACAGTTTAGTGAGGTGGTCTGTGTTCTTGCAAACGACTTACAAGGAAGTCGGACAGCATaGGGAGAGGTGCAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFLVQFSEVVCVLANDLQGSRTA*GEVQCQ Trigger: CTGGCATTGCACCTCTCCCCATGCTGTCCGACTTCC...TTGTAAGTCGTTTGCAAGAACACAGACCACCTCACTAAACTGTACAAGGAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTAGTGAGGTGGTCTGTGTTCTTGCAAACGACTTACAAAGTACAAGAAATCAGAAGGTGGGCCCATaGCAGGAAGGGAAGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QFSEVVCVLANDLQSTRNQKVGP*QEGKTA Trigger: CGCTGTCTTCCCTTCCTGCCATGGGCCCACCTTCTG...ATTTCTTGTACTTTGTAAGTCGTTTGCAAGAACACAGACCACCTCACTAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR TCA 90 bp | TGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACAGAGACCAATGTAGTTCCTGGTGGTaGCAAAGATGGAGGACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CNWEFCVNRNRDATHRDQCSSWW*QRWRTD Trigger: GTCAGTCCTCCATCTTTGTCACCACCAGGAACTACA...TTGGTCTCTGTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR GCA 90 bp | TGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACAGAGACCAATCCACTTCCAGCACATaGCAAACGTTTTCGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CNWEFCVNRNRDATHRDQSTSST*QTFSLA Trigger: GGCCAACGAAAACGTTTGGCATGTGCTGGAAGTGGA...TTGGTCTCTGTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTAAATAACCATAGCCAATaGCACATCCAAGGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QALSLLRSFPLELCTGHLNNHSQ*HIQGCL Trigger: AAGGCAGCCTTGGATGTGGCATTGGCTATGGTTATT...TAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAGGGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCTTGTACAGTTTAGTGAGGTGGTCTGTGTTCTTGCAAACGACTTACAATCCAGCTCTGTGTCCTaGGGAGTTTTCCTGTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: CFLVQFSEVVCVLANDLQSSSVS*GVFLYP Trigger: CGGGTACAGGAAAACTCCCCAGGACACAGAGCTGGA...TTGTAAGTCGTTTGCAAGAACACAGACCACCTCACTAAACTGTACAAGGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028509.11 |
||
| CDS-3UTR CCA 90 bp | TACAGGACACCTACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCCAGTGGTGGGGACCTTaGAAGCAGGAGACGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: YRTPTDTVHTSMKSMVVCQWWGP*KQETSH Trigger: ATGTGACGTCTCCTGCTTCCAAGGTCCCCACCACTG...GCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGTAGGTGTCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCTTGTACAGTTTAGTGAGGTGGTCTGTGTTCTTGCAAACGACTTACAACAGTGGTGGGGACCTTaGAAGCAGGAGACGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: CFLVQFSEVVCVLANDLQQWWGP*KQETSH Trigger: ATGTGACGTCTCCTGCTTCCAAGGTCCCCACCACTG...TTGTAAGTCGTTTGCAAGAACACAGACCACCTCACTAAACTGTACAAGGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCTTGTACAGTTTAGTGAGGTGGTCTGTGTTCTTGCAAACGACTTACAACTCTGTCCTCAACAGTaGTGGGGACCTTGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFLVQFSEVVCVLANDLQLCPQQ*WGPWKQ Trigger: CTGCTTCCAAGGTCCCCACCACTGTTGAGGACAGAG...TTGTAAGTCGTTTGCAAGAACACAGACCACCTCACTAAACTGTACAAGGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTACAGATACGGTATCAGCTCCAATaGTGTAATCACTGTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLRSFPLELCTGHLQIRYQLQ*CNHCEV Trigger: GACCTCACAGTGATTACATCATTGGAGCTGATACCG...TATCTGTAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR GCA 90 bp | CAAAACATCTGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACTCCACTTCCAGCACATaGCAAACGTTTTCGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QNICNWEFCVNRNRDATHSTSST*QTFSLA Trigger: GGCCAACGAAAACGTTTGGCATGTGCTGGAAGTGGA...GTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCAGATGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR GCA 90 bp | ACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCAGACCTGCCTTCTCCGCCCCATaGAGAGTTTGGTGTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TDTVHTSMKSMVVCDSRPAFSAP*RVWCDD Trigger: ATCATCACACCAAACTCTGCATGGGGCGGAGAAGGC...AGGTCTGGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | TGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACAGAGACCAAATAGAAGCAAGGGACTaGTTTACTTGTGGCGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CNWEFCVNRNRDATHRDQIEARD*FTCGGN Trigger: GTTGCCGCCACAAGTAAACCAGTCCCTTGCTTCTAT...TTGGTCTCTGTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | GATGTTCAATTAATAGTGTGCCATGGACCGGAACAAAACATCTGCAACTGGGAGATAGAAGCAAGGGACTaGTTTACTTGTGGCGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DVQLIVCHGPEQNICNWEIEARD*FTCGGN Trigger: GTTGCCGCCACAAGTAAACCAGTCCCTTGCTTCTAT...CTCCCAGTTGCAGATGTTTTGTTCCGGTCCATGGCACACTATTAATTGAACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | CTACCCATTTGTCTTGAGGTGCTAGCTGTTTTCTTGTCTTCTGGAGTCATCACTATAGAAGCAAGGGACTaGTTTACTTGTGGCGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPICLEVLAVFLSSGVITIEARD*FTCGGN Trigger: GTTGCCGCCACAAGTAAACCAGTCCCTTGCTTCTAT...AGTGATGACTCCAGAAGACAAGAAAACAGCTAGCACCTCAAGACAAATGGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| 3UTR CAA 72 bp | ACAGTAAGTGTGTGCACTTTAATAAACACATGGATGTaGAAAGGAGCAGAGGCTGCCAGGACGACATCACGT | + |
|
Preference number: 4 (lower is better) Translates to: TVSVCTLINTWM*KGAEAARTTSR Trigger: ACGTGATGTCGTCCTGGCAGCCTCTGCTCCTTTCAACATCCATGTGTTTATTAAAGTGCACACACTTACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCTTGTACAGTTTAGTGAGGTGGTCTGTGTTCTTGCAAACGACTTACAATGTAGTTCCTGGTGGTaGCAAAGATGGAGGACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CFLVQFSEVVCVLANDLQCSSWW*QRWRTD Trigger: GTCAGTCCTCCATCTTTGTCACCACCAGGAACTACA...TTGTAAGTCGTTTGCAAGAACACAGACCACCTCACTAAACTGTACAAGGAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGTTTTCTTGTCTTCTGGAGTCATCACTGCAGATAAAGTGCACAGTTCTAGTCCAGACAGACTCTaGTCAACTCCTGTAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAVFLSSGVITADKVHSSSPDRL*STPVVP Trigger: AGGAACTACAGGAGTTGAGCAGAGTCTGTCTGGACT...AGAACTGTGCACTTTATCTGCAGTGATGACTCCAGAAGACAAGAAAACAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR CCA 90 bp | ACACCTACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCTCCAGCTCTGTGTCCTaGGGAGTTTTCCTGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPTDTVHTSMKSMVVCDSSSSVS*GVFLYH Trigger: ATGGTACAGGAAAACTCCCCAGGACACAGAGCTGGA...GGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGTAGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112201.8 |
||
| 3UTR CAA 72 bp | TCACTGCAGATAAAGTGCACAGTTCTCATCCCTGGGTaGGAGTTTATTGGGAGTAGTTTACTGGGAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLQIKCTVLIPG*EFIGSSLLGEF Trigger: AAACTCTCCCAGTAAACTACTCCCAATAAACTCCAACCCAGGGATGAGAACTGTGCACTTTATCTGCAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTTAAGATTGAGGGTAATAACATAGCTGCTTTACTTAAAAGGCAGGTAAGATGGAGGACTGACTaGAGACAGCTGGACCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLKIEGNNIAALLKRQVRWRTD*RQLDLC Trigger: ACAGAGGTCCAGCTGTCTTCAGTCAGTCCTCCATCT...TACCTGCCTTTTAAGTAAAGCAGCTATGTTATTACCCTCAATCTTAAGGGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR GCA 90 bp | ACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCAGACCTAGTCCAGACAGACTCTaGTCAACTCCTGTAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDTVHTSMKSMVVCDSRPSPDRL*STPVVP Trigger: AGGAACTACAGGAGTTGAGCAGAGTCTGTCTGGACT...AGGTCTGGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | TACAGGACACCTACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCCAGGCTTCTCAACGTTaGCTTTCAGCAGATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YRTPTDTVHTSMKSMVVCQASQR*LSADPS Trigger: TGAAGGATCTGCTGAAAGCCAACGTTGAGAAGCCTG...GCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGTAGGTGTCCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CCA 90 bp | AGAACCCTTAAGATTGAGGGTAATAACATAGCTGCTTTACTTAAAAGGCAGGTAGCCAAACGTTTTCGTTaGCCCCGTCAAAGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLKIEGNNIAALLKRQVAKRFR*PRQSCR Trigger: TCTGCAGCTTTGACGGGGCCAACGAAAACGTTTGGC...TACCTGCCTTTTAAGTAAAGCAGCTATGTTATTACCCTCAATCTTAAGGGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCTTGTACAGTTTAGTGAGGTGGTCTGTGTTCTTGCAAACGACTTACAAGGACTGGTTTACTTGTaGCGGCAACAATGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CFLVQFSEVVCVLANDLQGLVYL*RQQWYS Trigger: ACTGTACCATTGTTGCCGCCACAAGTAAACCAGTCC...TTGTAAGTCGTTTGCAAGAACACAGACCACCTCACTAAACTGTACAAGGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| 3UTR CAA 72 bp | TTTCTACCCATTTGTCTTGAGGTGCTAGCTGTTTTCTaGTCTTCTGGAGTCATCACTGCAGATAAAGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLPICLEVLAVF*SSGVITADKVH Trigger: GTGCACTTTATCTGCAGTGATGACTCCAGAAGACAAGAAAACAGCTAGCACCTCAAGACAAATGGGTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTTAGTGAGGTGGTCTGTGTTCTTGCAAACGACTTACAAAGTACAAGAAATAGTCCAGACAGACTCTaGTCAACTCCTGTAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFSEVVCVLANDLQSTRNSPDRL*STPVVP Trigger: AGGAACTACAGGAGTTGAGCAGAGTCTGTCTGGACT...ATTTCTTGTACTTTGTAAGTCGTTTGCAAGAACACAGACCACCTCACTAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | ACACCTACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCACCAGTCATTTGTCCTaGAAGGGAAATCTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPTDTVHTSMKSMVVCDSTSHLS*KGNLLS Trigger: GGAAAGAAGATTTCCCTTCCAGGACAAATGACTGGT...GGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGTAGGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CCA 90 bp | GGTAAATTCCTTATGCATACTCAGGACAAGCAGGAAGTGTTTCAGGTTGTTAAAACCAGTCATTTGTCCTaGAAGGGAAATCTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKFLMHTQDKQEVFQVVKTSHLS*KGNLLS Trigger: GGAAAGAAGATTTCCCTTCCAGGACAAATGACTGGT...TTTAACAACCTGAAACACTTCCTGCTTGTCCTGAGTATGCATAAGGAATTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR CCA 90 bp | ATAAGAGTATCGGAGATAACGTACCCATGTCTTCTAAGTTTTTCCAAATGTAGAGGACTGGTTTACTTGTaGCGGCAACAATGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRVSEITYPCLLSFSKCRGLVYL*RQQWYS Trigger: ACTGTACCATTGTTGCCGCCACAAGTAAACCAGTCC...TCTACATTTGGAAAAACTTAGAAGACATGGGTACGTTATCTCCGATACTCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS GCA 90 bp | AAACCCGGGCTCCCGAGCTCTGGCAAACCGACCCCTGGCATGATGTaGGGAGCAGGGAGGTTGAAGTTGGAGAGGCTGGGGAGGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KPGLPSSGKPTPGMM*GAGRLKLERLGRLG Trigger: CCCCAACCTCCCCAGCCTCTCCAACTTCAACCTCCCTGCTCCGCACATCATGCCAGGGGTCGGTTTGCCAGAGCTCGGGAGCCCGGGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS GCA 90 bp | ATACCCGGGCTCCCGAGCTCTGGCAAACCGACCCCTGGCATGATGTaGGGAGCAGGGAGGTTGAAGTTGGAGAGGCTGGGGAGGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IPGLPSSGKPTPGMM*GAGRLKLERLGRLG Trigger: CCCCAACCTCCCCAGCCTCTCCAACTTCAACCTCCCTGCTCCGCACATCATGCCAGGGGTCGGTTTGCCAGAGCTCGGGAGCCCGGGTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112205.2 |
||
| CDS CCA 90 bp | GGCATGCAACATACCCGGGCTCCCGAGCTCTGGCAAACCGACCCCTaGCATGATGTGCGGAGCAGGGAGGTTGAAGTTGGAGAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GMQHTRAPELWQTDP*HDVRSREVEVGEAG Trigger: CCCAGCCTCTCCAACTTCAACCTCCCTGCTCCGCACATCATGCCAGGGGTCGGTTTGCCAGAGCTCGGGAGCCCGGGTATGTTGCATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112205.2 |
||
| CDS TCA 90 bp | CTCCCCTGCGCTGGCTGCAGAAGAGCCCTCTGGAACCAAAGGGAATaGCGGGAGGAAGTCGGACAGCATGGGGAGAGGTGCAATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPCAGCRRALWNQRE*REEVGQHGERCNAR Trigger: CCTGGCATTGCACCTCTCCCCATGCTGTCCGACTTCCTCCCGTCATTCCCTTTGGTTCCAGAGGGCTCTTCTGCAGCCAGCGCAGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS TCA 90 bp | CATCTGCATCAGACACAGGCTTCTCGACGGCCGGGGTGCAGTCGCTaGCTCTGTCCTCAACAGTGGTGGGGACCTTGGAAGCAGGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: HLHQTQASRRPGCSR*LCPQQWWGPWKQET Trigger: CGTCTCCTGCTTCCAAGGTCCCCACCACTGTTGAGGACAGAGTCAGCGACTGCACCCCGGCCGTCGAGAAGCCTGTGTCTGATGCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS CCA 90 bp | AGCCCTCTGGAACCAAAGGGAATGACGGGAGGAAGTCGGACAGCATaGGGAGAGGTGCAATGCCAGGTAAGTTTCGGGGAGGCAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPLEPKGMTGGSRTA*GEVQCQVSFGEARR Trigger: CCTCCTTGCCTCCCCGAAACTTACCTGGCATTGCACCTCTCCCCATGCTGTCCGACTTCCTCCCGTCATTCCCTTTGGTTCCAGAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS GCA 90 bp | AAGGGAATGACGGGAGGAAGTCGGACAGCATGGGGAGAGGTGCAATaGCAGGTAAGTTTCGGGGAGGCAAGGAGGGAAGAGGTGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KGMTGGSRTAWGEVQ*QVSFGEARREEVAN Trigger: GTTTGCCACCTCTTCCCTCCTTGCCTCCCCGAAACTTACCTGGCATTGCACCTCTCCCCATGCTGTCCGACTTCCTCCCGTCATTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS GCA 90 bp | AGCAGGAGACGTCACATCCACAGTGAGGGAAGAGGCGTCTGCCTTTaGAGTAGTCATGACAGGGTCAGAAGGTGGGCCCATGGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRRRHIHSEGRGVCL*SSHDRVRRWAHGRK Trigger: CTTCCTGCCATGGGCCCACCTTCTGACCCTGTCATGACTACTGCAAAGGCAGACGCCTCTTCCCTCACTGTGGATGTGACGTCTCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS GCA 90 bp | CTTGGAAGCAGGAGACGTCACATCCACAGTGAGGGAAGAGGCGTCTaGCTTTGCAGTAGTCATGACAGGGTCAGAAGGTGGGCCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSRRRHIHSEGRGV*LCSSHDRVRRWAHG Trigger: GCCATGGGCCCACCTTCTGACCCTGTCATGACTACTGCAAAGGCAGACGCCTCTTCCCTCACTGTGGATGTGACGTCTCCTGCTTCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS GCA 90 bp | CTGACAGCTGGTGGTGCCGAGCTAATGGAGAGTCCAGACAGACTCTaGTCAACTCCTGTAGTTCCTGGTGGTGACAAAGATGGAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: LTAGGAELMESPDRL*STPVVPGGDKDGGL Trigger: CAGTCCTCCATCTTTGTCACCACCAGGAACTACAGGAGTTGAGCAGAGTCTGTCTGGACTCTCCATTAGCTCGGCACCACCAGCTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS-3UTR CAA 90 bp | ACACAAGGCATAGCAGTGGTACAGGGAACCCAGTGGGTACCCCGCCATCTCTCTACAGGCTTCTCAACGTaGGCTTTCAGCAGATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQGIAVVQGTQWVPRHLSTGFST*AFSRSF Trigger: GAAGGATCTGCTGAAAGCCAACGTTGAGAAGCCTGT...AGAGAGATGGCGGGGTACCCACTGGGTTCCCTGTACCACTGCTATGCCTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CAA 90 bp | TGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACAGAGACCAATGGCCGCCCCACAAGTaGCTCGGTGTGACCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CNWEFCVNRNRDATHRDQWPPHK*LGVTEA Trigger: GGCCTCGGTCACACCGAGCAACTTGTGGGGCGGCCA...TTGGTCTCTGTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CAA 90 bp | GAACCCAGTGGGTACCCCGCCATCTCTCTTCCAAAGATGAACCTCCCAGAACGGGGGGGTACCAGTCATTaGTCCTGGAAGGGAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: EPSGYPAISLPKMNLPERGGTSH*SWKGNL Trigger: AAGATTTCCCTTCCAGGACAAATGACTGGTACCCCC...CCGTTCTGGGAGGTTCATCTTTGGAAGAGAGATGGCGGGGTACCCACTGGGTTC 54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS CCA 90 bp | TGGTACAGTTGGTACGCCTGTACTGAGAACATTGCTGACAGCTGGTaGTGCCGAGCTAATGGAGAGTCCAGACAGACTCTGCTCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: WYSWYACTENIADSW*CRANGESRQTLLNS Trigger: GGAGTTGAGCAGAGTCTGTCTGGACTCTCCATTAGCTCGGCACCACCAGCTGTCAGCAATGTTCTCAGTACAGGCGTACCAACTGTACCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS-3UTR CAA 90 bp | TTGAGGGTGGGAGATGTGGTTGGTTTTCCGGATGGCCACCATCTTTTCCTTCTGTGCCAAACGTTTTCGTaGGCCCCGTCAAAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRVGDVVGFPDGHHLFLLCQTFS*APSKLQ Trigger: CTGCAGCTTTGACGGGGCCAACGAAAACGTTTGGCA...CAGAAGGAAAAGATGGTGGCCATCCGGAAAACCAACCACATCTCCCACCCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| CDS-3UTR CAA 90 bp | GCCCTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTACAGACAGTGGTGGGGACCTaGGAAGCAGGAGACGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ALSLLRSFPLELCTGHLQTVVGT*EAGDVT Trigger: TGTGACGTCTCCTGCTTCCAAGGTCCCCACCACTGT...CTGTAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS CCA 90 bp | GCCAATGCCACATCCAAGGCTGCCTTCTCCGCCCCATGCAGAGTTTaGTGTGATGATCACTTCTCTGCAGTTGTCTGTGTCTGTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ANATSKAAFSAPCRV*CDDHFSAVVCVCVV Trigger: TACAACACAGACACAGACAACTGCAGAGAAGTGATCATCACACCAAACTCTGCATGGGGCGGAGAAGGCAGCCTTGGATGTGGCATTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 90 bp | CAATGGTACAGTTGGTACGCCTGTACTGAGAACATTGCTGACAGCTaGTGGTGCCGAGCTAATGGAGAGTCCAGACAGACTCTGCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QWYSWYACTENIADS*WCRANGESRQTLLN Trigger: GTTGAGCAGAGTCTGTCTGGACTCTCCATTAGCTCGGCACCACCAGCTGTCAGCAATGTTCTCAGTACAGGCGTACCAACTGTACCATTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS-3UTR CAA 90 bp | TACAGGACACCTACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCTGGCCGCCCCACAAGTaGCTCGGTGTGACCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YRTPTDTVHTSMKSMVVCWPPHK*LGVTEA Trigger: GGCCTCGGTCACACCGAGCAACTTGTGGGGCGGCCA...GCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGTAGGTGTCCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS GCA 90 bp | AGCTCCAATGATGTAATCACTGTGAGGTCTCAATCCTGCCAGCGCTaGTGGGGAATTGGATTCCACTTCCAGCACATGCCAAACGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSNDVITVRSQSCQR*WGIGFHFQHMPNVF Trigger: GAAAACGTTTGGCATGTGCTGGAAGTGGAATCCAATTCCCCAGCAGCGCTGGCAGGATTGAGACCTCACAGTGATTACATCATTGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 90 bp | GGTAATGTGGTAGCTGGGTTCATTGGTGGCATAGAAGCAAGGGACTaGTTTACTTGTGGCGGCAACAATGGTACAGTTGGTACGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GNVVAGFIGGIEARD*FTCGGNNGTVGTPV Trigger: TACAGGCGTACCAACTGTACCATTGTTGCCGCCACAAGTAAACCAGTCCCTTGCTTCTATGCCACCAATGAACCCAGCTACCACATTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS GCA 90 bp | GCAGTTGTCTGTGTCTGTGTTGTACACGTAGAGCTTCAGGGGCTTTaGTTCGTGGGTCTCAATAAGGCTGAACAGGTCTTCAGACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: AVVCVCVVHVELQGL*FVGLNKAEQVFRLI Trigger: AATGAGTCTGAAGACCTGTTCAGCCTTATTGAGACCCACGAAGCAAAGCCCCTGAAGCTCTACGTGTACAACACAGACACAGACAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 90 bp | TCCAATGATGTAATCACTGTGAGGTCTCAATCCTGCCAGCGCTGCTaGGGAATTGGATTCCACTTCCAGCACATGCCAAACGTTTTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SNDVITVRSQSCQRC*GIGFHFQHMPNVFV Trigger: AACGAAAACGTTTGGCATGTGCTGGAAGTGGAATCCAATTCCCCAGCAGCGCTGGCAGGATTGAGACCTCACAGTGATTACATCATTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 90 bp | AGCTGGGTTCATTGGTGGCATAGAAGCAAGGGACTGGTTTACTTGTaGCGGCAACAATGGTACAGTTGGTACGCCTGTACTGAGAACATT | + |
|
Preference number: 5 (lower is better) Translates to: SWVHWWHRSKGLVYL*RQQWYSWYACTENI Trigger: AATGTTCTCAGTACAGGCGTACCAACTGTACCATTGTTGCCGCCACAAGTAAACCAGTCCCTTGCTTCTATGCCACCAATGAACCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
||
| CDS-3UTR CAA 90 bp | GATGTTCAATTAATAGTGTGCCATGGACCGGAACAAAACATCTGCAACTGGGAGTGCCAAACGTTTTCGTaGGCCCCGTCAAAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DVQLIVCHGPEQNICNWECQTFS*APSKLQ Trigger: CTGCAGCTTTGACGGGGCCAACGAAAACGTTTGGCA...CTCCCAGTTGCAGATGTTTTGTTCCGGTCCATGGCACACTATTAATTGAACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCCCTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTAGGGGGTACCAGTCATTaGTCCTGGAAGGGAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: QALSLLRSFPLELCTGHLGGTSH*SWKGNL Trigger: AAGATTTCCCTTCCAGGACAAATGACTGGTACCCCC...TAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAGGGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTTGGTTTTCCGGATGGCCACCATCTTTTCCTTCTGAAACTGTAAGCCAGAAGGGACTGGTTTACTaGTGGCGGCAACAATGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CGWFSGWPPSFPSETVSQKGLVY*WRQQWY Trigger: GTACCATTGTTGCCGCCACAAGTAAACCAGTCCCTT...CTGGCTTACAGTTTCAGAAGGAAAAGATGGTGGCCATCCGGAAAACCAACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCAGACCTACAGTGGTGGGGACCTaGGAAGCAGGAGACGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TDTVHTSMKSMVVCDSRPTVVGT*EAGDVT Trigger: TGTGACGTCTCCTGCTTCCAAGGTCCCCACCACTGT...AGGTCTGGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATACGGTACACACTAGTATGAAATCAATGGTAGTTTGCGATTCCAGACCTTGCCAAACGTTTTCGTaGGCCCCGTCAAAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TDTVHTSMKSMVVCDSRPCQTFS*APSKLQ Trigger: CTGCAGCTTTGACGGGGCCAACGAAAACGTTTGGCA...AGGTCTGGAATCGCAAACTACCATTGATTTCATACTAGTGTGTACCGTATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGCCTCTTGCGTAGTTTCCCCTTAGAATTATGTACAGGACACCTACAGATAAAGGGACTGGTTTACTaGTGGCGGCAACAATGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLLRSFPLELCTGHLQIKGLVY*WRQQWY Trigger: GTACCATTGTTGCCGCCACAAGTAAACCAGTCCCTT...TATCTGTAGGTGTCCTGTACATAATTCTAAGGGGAAACTACGCAAGAGGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
||
| CDS CCA 90 bp | AAACCCATCCTTAAGAGGAGTAATGGGGGTACCAGTCATTTGTCCTaGAAGGGAAATCTTCTTTCCTTCTTCAAAGGGGCGTGTAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KPILKRSNGGTSHLS*KGNLLSFFKGACRY Trigger: ATACCTACACGCCCCTTTGAAGAAGGAAAGAAGATTTCCCTTCCAGGACAAATGACTGGTACCCCCATTACTCCTCTTAAGGATGGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
||
| CDS-3UTR CAA 90 bp | CAAAACATCTGCAACTGGGAGTTTTGTGTAAACCGTAATAGAGATGCGACTCACACAGGCTTCTCAACGTaGGCTTTCAGCAGATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QNICNWEFCVNRNRDATHTGFST*AFSRSF Trigger: GAAGGATCTGCTGAAAGCCAACGTTGAGAAGCCTGT...GTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCCAGTTGCAGATGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CAA 90 bp | CTAGCTGTTTTCTTGTCTTCTGGAGTCATCACTGCAGATAAAGTGCACAGTTCTACAGGCTTCTCAACGTaGGCTTTCAGCAGATCCTTC | + |
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Preference number: 5 (lower is better) Translates to: LAVFLSSGVITADKVHSSTGFST*AFSRSF Trigger: GAAGGATCTGCTGAAAGCCAACGTTGAGAAGCCTGT...AGAACTGTGCACTTTATCTGCAGTGATGACTCCAGAAGACAAGAAAACAGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| CDS-3UTR CAA 90 bp | AAAATATTTCATTTCCTTACACAAGGCATAGCAGTGGTACAGGGAACCCAGTGGAAGGGACTGGTTTACTaGTGGCGGCAACAATGGTAC | + |
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Preference number: 5 (lower is better) Translates to: KIFHFLTQGIAVVQGTQWKGLVY*WRQQWY Trigger: GTACCATTGTTGCCGCCACAAGTAAACCAGTCCCTT...CCACTGGGTTCCCTGTACCACTGCTATGCCTTGTGTAAGGAAATGAAATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS-3UTR CAA 90 bp | ATAAGAGTATCGGAGATAACGTACCCATGTCTTCTAAGTTTTTCCAAATGTAGAGGGGGTACCAGTCATTaGTCCTGGAAGGGAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: IRVSEITYPCLLSFSKCRGGTSH*SWKGNL Trigger: AAGATTTCCCTTCCAGGACAAATGACTGGTACCCCC...TCTACATTTGGAAAAACTTAGAAGACATGGGTACGTTATCTCCGATACTCTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133432.8 |
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| CDS CCA 72 bp | GGAGGGAAGAGGTGGCAAACCCGGGCTCCCGAGCTCTaGCAAACCGACCCCTGGCATGATGTGCGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GGKRWQTRAPEL*QTDPWHDVRSR Trigger: CCTGCTCCGCACATCATGCCAGGGGTCGGTTTGCCAGAGCTCGGGAGCCCGGGTTTGCCACCTCTTCCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS GCA 72 bp | AGTTTTCCTGTACCCGCAAAACGTGGTAGCCCTCGGTaGCGCCGCCCGGGATCTCGACGCTCTGCGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SFPVPAKRGSPR*RRPGSRRSARS Trigger: GCTCCTCGCAGAGCGTCGAGATCCCGGGCGGCGGCACCGAGGGCTACCACGTTTTGCGGGTACAGGAAAACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028509.11 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS TCA 72 bp | CAGACACAGGCTTCTCGACGGCCGGGGTGCAGTCGCTaGCTCTGTCCTCAACAGTGGTGGGGACCTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: QTQASRRPGCSR*LCPQQWWGPWK Trigger: CTTCCAAGGTCCCCACCACTGTTGAGGACAGAGTCAGCGACTGCACCCCGGCCGTCGAGAAGCCTGTGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS TCA 72 bp | GCTGGCTGCAGAAGAGCCCTCTGGAACCAAAGGGAATaGCGGGAGGAAGTCGGACAGCATGGGGAGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: AGCRRALWNQRE*REEVGQHGERC Trigger: GCACCTCTCCCCATGCTGTCCGACTTCCTCCCGTCATTCCCTTTGGTTCCAGAGGGCTCTTCTGCAGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS GCA 72 bp | ACGGGAGGAAGTCGGACAGCATGGGGAGAGGTGCAATaGCAGGTAAGTTTCGGGGAGGCAAGGAGGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: TGGSRTAWGEVQ*QVSFGEARREE Trigger: CTCTTCCCTCCTTGCCTCCCCGAAACTTACCTGGCATTGCACCTCTCCCCATGCTGTCCGACTTCCTCCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS GCA 72 bp | CGTCACATCCACAGTGAGGGAAGAGGCGTCTGCCTTTaGAGTAGTCATGACAGGGTCAGAAGGTGGGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RHIHSEGRGVCL*SSHDRVRRWAH Trigger: ATGGGCCCACCTTCTGACCCTGTCATGACTACTGCAAAGGCAGACGCCTCTTCCCTCACTGTGGATGTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS CCA 72 bp | GAACCAAAGGGAATGACGGGAGGAAGTCGGACAGCATaGGGAGAGGTGCAATGCCAGGTAAGTTTCGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: EPKGMTGGSRTA*GEVQCQVSFGE Trigger: CTCCCCGAAACTTACCTGGCATTGCACCTCTCCCCATGCTGTCCGACTTCCTCCCGTCATTCCCTTTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS GCA 72 bp | AGGAGACGTCACATCCACAGTGAGGGAAGAGGCGTCTaGCTTTGCAGTAGTCATGACAGGGTCAGAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RRRHIHSEGRGV*LCSSHDRVRRW Trigger: CCACCTTCTGACCCTGTCATGACTACTGCAAAGGCAGACGCCTCTTCCCTCACTGTGGATGTGACGTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 |
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| CDS GCA 72 bp | GCCAATGCCACATCCAAGGCTGCCTTCTCCGCCCCATaGAGAGTTTGGTGTGATGATCACTTCTCTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: ANATSKAAFSAP*RVWCDDHFSAV Trigger: AACTGCAGAGAAGTGATCATCACACCAAACTCTGCATGGGGCGGAGAAGGCAGCCTTGGATGTGGCATTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 72 bp | TGGTACGCCTGTACTGAGAACATTGCTGACAGCTGGTaGTGCCGAGCTAATGGAGAGTCCAGACAGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: WYACTENIADSW*CRANGESRQTL Trigger: CAGAGTCTGTCTGGACTCTCCATTAGCTCGGCACCACCAGCTGTCAGCAATGTTCTCAGTACAGGCGTACCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CAA 90 bp | TGTGGCGGCAACAATGGTACAGTTGGTACGCCTGTACTGAGAACATaGCTGACAGCTGGTGGTGCCGAGCTAATGGAGAGTCCAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: CGGNNGTVGTPVLRT*LTAGGAELMESPDR Trigger: TCTGTCTGGACTCTCCATTAGCTCGGCACCACCAGCTGTCAGCAATGTTCTCAGTACAGGCGTACCAACTGTACCATTGTTGCCGCCACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS GCA 72 bp | GATGTAATCACTGTGAGGTCTCAATCCTGCCAGCGCTaGTGGGGAATTGGATTCCACTTCCAGCACATGCCA | + |
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Preference number: 6 (lower is better) Translates to: DVITVRSQSCQR*WGIGFHFQHMP Trigger: TGGCATGTGCTGGAAGTGGAATCCAATTCCCCAGCAGCGCTGGCAGGATTGAGACCTCACAGTGATTACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 72 bp | GTAATCACTGTGAGGTCTCAATCCTGCCAGCGCTGCTaGGGAATTGGATTCCACTTCCAGCACATGCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: VITVRSQSCQRC*GIGFHFQHMPN Trigger: GTTTGGCATGTGCTGGAAGTGGAATCCAATTCCCCAGCAGCGCTGGCAGGATTGAGACCTCACAGTGATTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 72 bp | ACATCCAAGGCTGCCTTCTCCGCCCCATGCAGAGTTTaGTGTGATGATCACTTCTCTGCAGTTGTCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TSKAAFSAPCRV*CDDHFSAVVCV Trigger: GACACAGACAACTGCAGAGAAGTGATCATCACACCAAACTCTGCATGGGGCGGAGAAGGCAGCCTTGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 72 bp | AGTTGGTACGCCTGTACTGAGAACATTGCTGACAGCTaGTGGTGCCGAGCTAATGGAGAGTCCAGACAGACT | + |
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Preference number: 6 (lower is better) Translates to: SWYACTENIADS*WCRANGESRQT Trigger: AGTCTGTCTGGACTCTCCATTAGCTCGGCACCACCAGCTGTCAGCAATGTTCTCAGTACAGGCGTACCAACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CAA 90 bp | GGTAGCTGGGTTCATTGGTGGCATAGAAGCAAGGGACTGGTTTACTaGTGGCGGCAACAATGGTACAGTTGGTACGCCTGTACTGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: GSWVHWWHRSKGLVY*WRQQWYSWYACTEN Trigger: GTTCTCAGTACAGGCGTACCAACTGTACCATTGTTGCCGCCACAAGTAAACCAGTCCCTTGCTTCTATGCCACCAATGAACCCAGCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS GCA 72 bp | AGCTCCAATGATGTAATCACTGTGAGGTCTCAATCCTaGCAGCGCTGCTGGGGAATTGGATTCCACTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSNDVITVRSQS*QRCWGIGFHFQ Trigger: CTGGAAGTGGAATCCAATTCCCCAGCAGCGCTGGCAGGATTGAGACCTCACAGTGATTACATCATTGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS GCA 72 bp | TGTGTCTGTGTTGTACACGTAGAGCTTCAGGGGCTTTaGTTCGTGGGTCTCAATAAGGCTGAACAGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CVCVVHVELQGL*FVGLNKAEQVF Trigger: GAAGACCTGTTCAGCCTTATTGAGACCCACGAAGCAAAGCCCCTGAAGCTCTACGTGTACAACACAGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 72 bp | CATTGGTGGCATAGAAGCAAGGGACTGGTTTACTTGTaGCGGCAACAATGGTACAGTTGGTACGCCTGTACT | + |
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Preference number: 6 (lower is better) Translates to: HWWHRSKGLVYL*RQQWYSWYACT Trigger: AGTACAGGCGTACCAACTGTACCATTGTTGCCGCCACAAGTAAACCAGTCCCTTGCTTCTATGCCACCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CAA 72 bp | TTGGATTCCACTTCCAGCACATGCCAAACGTTTTCGTaGGCCCCGTCAAAGCTGCAGAAACGAATGCTAACC | + |
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Preference number: 6 (lower is better) Translates to: LDSTSSTCQTFS*APSKLQKRMLT Trigger: GGTTAGCATTCGTTTCTGCAGCTTTGACGGGGCCAACGAAAACGTTTGGCATGTGCTGGAAGTGGAATCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CAA 72 bp | AACAATGGTACAGTTGGTACGCCTGTACTGAGAACATaGCTGACAGCTGGTGGTGCCGAGCTAATGGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: NNGTVGTPVLRT*LTAGGAELMES Trigger: ACTCTCCATTAGCTCGGCACCACCAGCTGTCAGCAATGTTCTCAGTACAGGCGTACCAACTGTACCATTGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 72 bp | AGAAGCAAGGGACTGGTTTACTTGTGGCGGCAACAATaGTACAGTTGGTACGCCTGTACTGAGAACATTGCT | + |
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Preference number: 6 (lower is better) Translates to: RSKGLVYLWRQQ*YSWYACTENIA Trigger: AGCAATGTTCTCAGTACAGGCGTACCAACTGTACCATTGTTGCCGCCACAAGTAAACCAGTCCCTTGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CCA 72 bp | CTTAAGAGGAGTAATGGGGGTACCAGTCATTTGTCCTaGAAGGGAAATCTTCTTTCCTTCTTCAAAGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LKRSNGGTSHLS*KGNLLSFFKGA Trigger: CGCCCCTTTGAAGAAGGAAAGAAGATTTCCCTTCCAGGACAAATGACTGGTACCCCCATTACTCCTCTTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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| CDS CAA 72 bp | CCCATCCTTAAGAGGAGTAATGGGGGTACCAGTCATTaGTCCTGGAAGGGAAATCTTCTTTCCTTCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: PILKRSNGGTSH*SWKGNLLSFFK Trigger: TTTGAAGAAGGAAAGAAGATTTCCCTTCCAGGACAAATGACTGGTACCCCCATTACTCCTCTTAAGGATGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028509.11 ENSMUST00000112201.8 ENSMUST00000112205.2 ENSMUST00000133432.8 |
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