Pregenerated sensors for GORASP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032513Ensembl transcript IDs: ENSMUST00000035099.9
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCCTGCGCAGCACGTGGACCTGCAGGCTGCCACCCACAGCCTGTaGTGCGCAGTGCTGCCCATGGCGCCCTGGCTGTCCGATAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: EPAQHVDLQAATHSL*CAVLPMAPWLSDSP Trigger: TGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCTGTGGGTGGCAGCCTGCAGGTCCACGTGCTGCGCAGGCTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR GCA 90 bp | TGCAACTCCAGGGCTGGAGCCTGCGCAGCACGTGGACCTGCAGGCTaGCACCCACAGCCTGTGCTGCGCAGTGCTGCCCATGGCGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: CNSRAGACAARGPAG*HPQPVLRSAAHGAL Trigger: CAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCTGTGGGTGGCAGCCTGCAGGTCCACGTGCTGCGCAGGCTCCAGCCCTGGAGTTGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR GCA 90 bp | ACGTGGACCTGCAGGCTGCCACCCACAGCCTGTGCTGCGCAGTGCTaGCCATGGCGCCCTGGCTGTCCGATAGCCCAAGCTGCTGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: TWTCRLPPTACAAQC*PWRPGCPIAQAAVA Trigger: GGCCACAGCAGCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCTGTGGGTGGCAGCCTGCAGGTCCACGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 90 bp | GCTGCCACCCACAGCCTGTGCTGCGCAGTGCTGCCCATGGCGCCCTaGCTGTCCGATAGCCCAAGCTGCTGTGGCCACTCCTTCCGCCAG | + |
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Preference number: 1 (lower is better) Translates to: AATHSLCCAVLPMAP*LSDSPSCCGHSFRQ Trigger: CTGGCGGAAGGAGTGGCCACAGCAGCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCTGTGGGTGGCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR GCA 90 bp | AGCACGTGGACCTGCAGGCTGCCACCCACAGCCTGTGCTGCGCAGTaGTGCCCATGGCGCCCTGGCTGTCCGATAGCCCAAGCTGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: STWTCRLPPTACAAQ*CPWRPGCPIAQAAV Trigger: CACAGCAGCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCTGTGGGTGGCAGCCTGCAGGTCCACGTGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR GCA 90 bp | GAAGACCTGCAACTCCAGGGCTGGAGCCTGCGCAGCACGTGGACCTaGAGGCTGCCACCCACAGCCTGTGCTGCGCAGTGCTGCCCATGG | + |
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Preference number: 1 (lower is better) Translates to: EDLQLQGWSLRSTWT*RLPPTACAAQCCPW Trigger: CCATGGGCAGCACTGCGCAGCACAGGCTGTGGGTGGCAGCCTGCAGGTCCACGTGCTGCGCAGGCTCCAGCCCTGGAGTTGCAGGTCTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 90 bp | ACCTGCAGGCTGCCACCCACAGCCTGTGCTGCGCAGTGCTGCCCATaGCGCCCTGGCTGTCCGATAGCCCAAGCTGCTGTGGCCACTCCT | + |
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Preference number: 1 (lower is better) Translates to: TCRLPPTACAAQCCP*RPGCPIAQAAVATP Trigger: AGGAGTGGCCACAGCAGCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCTGTGGGTGGCAGCCTGCAGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 90 bp | GAAGGCAGCTGGGGGTCAGAGTGCCTAACCACAGCTAAATTGAGCTaGCCCCAGAGCAGCCCTGTGGTAAGCCATGTTGTACGGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: EGSWGSECLTTAKLS*PQSSPVVSHVVRPQ Trigger: CTGAGGCCGTACAACATGGCTTACCACAGGGCTGCTCTGGGGCCAGCTCAATTTAGCTGTGGTTAGGCACTCTGACCCCCAGCTGCCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 90 bp | GCTGTCTACGTGAGGGCTGAAGGGAGCGTCATAGGACCCAAGAACTaGAGTGTAAGCTCCTTTGTACCTCCCCCTGGGGCTGTGAACAGC | + |
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Preference number: 1 (lower is better) Translates to: AVYVRAEGSVIGPKN*SVSSFVPPPGAVNS Trigger: GCTGTTCACAGCCCCAGGGGGAGGTACAAAGGAGCTTACACTCCAGTTCTTGGGTCCTATGACGCTCCCTTCAGCCCTCACGTAGACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 90 bp | AGTGAGGAAGGGCATTGGGACTTAGGGTCTTCCTCAGTACAGGTGTaGCTGCCTATGGACACAGCCTCTTGTCCCTCGCCCCATCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: SEEGHWDLGSSSVQV*LPMDTASCPSPHLH Trigger: GTGAAGATGGGGCGAGGGACAAGAGGCTGTGTCCATAGGCAGCCACACCTGTACTGAGGAAGACCCTAAGTCCCAATGCCCTTCCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 90 bp | GTGTTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTaGTTCACTGGCGCAGTACTGATCCACAGGCAGTTGTGCCCCTAT | + |
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Preference number: 1 (lower is better) Translates to: VFAGGASALSVGFAG*FTGAVLIHRQLCPY Trigger: ATAGGGGCACAACTGCCTGTGGATCAGTACTGCGCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR TCA 90 bp | TCCTGCAGGGAACAGCTGAGGGGCCCAGATCTGTCCCTTACAAATTaGCTGCAGAACAGGGTCCCCTCACTTAACTCTGGAACACAGACA | + |
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Preference number: 1 (lower is better) Translates to: SCREQLRGPDLSLTN*LQNRVPSLNSGTQT Trigger: TGTCTGTGTTCCAGAGTTAAGTGAGGGGACCCTGTTCTGCAGTCAATTTGTAAGGGACAGATCTGGGCCCCTCAGCTGTTCCCTGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 90 bp | GAACAAAGAGGCTGGAAAAGAAGACCAAAGGCAGCTTACAGTGATTaGCAAAGGACATGGAACTGGGGCTGCAGAGGACATGCCTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: EQRGWKRRPKAAYSD*QRTWNWGCRGHAWH Trigger: GTGCCAGGCATGTCCTCTGCAGCCCCAGTTCCATGTCCTTTGCCAATCACTGTAAGCTGCCTTTGGTCTTCTTTTCCAGCCTCTTTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR TCA 90 bp | GCTCCGCGTGAGCAGCACGACAACTGTCAGAACTTACGGCCATGCTaGAGTTGCAGTTTCATTCAGATGCTACCTAAAGTTTATGTTACT | + |
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Preference number: 1 (lower is better) Translates to: APREQHDNCQNLRPC*SCSFIQMLPKVYVT Trigger: AGTAACATAAACTTTAGGTAGCATCTGAATGAAACTGCAACTTCAGCATGGCCGTAAGTTCTGACAGTTGTCGTGCTGCTCACGCGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 90 bp | GAGTCCTTGGCTTACCAGCCTAAGTACCCTGAACAGACAGTTACATaGTCTGTGGATGATGGAACAAAGAGGCTGGAAAAGAAGACCAAA | + |
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Preference number: 1 (lower is better) Translates to: ESLAYQPKYPEQTVT*SVDDGTKRLEKKTK Trigger: TTTGGTCTTCTTTTCCAGCCTCTTTGTTCCATCATCCACAGACCATGTAACTGTCTGTTCAGGGTACTTAGGCTGGTAAGCCAAGGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 90 bp | CTGAACAGACAGTTACATGGTCTGTGGATGATGGAACAAAGAGGCTaGAAAAGAAGACCAAAGGCAGCTTACAGTGATTGGCAAAGGACA | + |
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Preference number: 1 (lower is better) Translates to: LNRQLHGLWMMEQRG*KRRPKAAYSDWQRT Trigger: TGTCCTTTGCCAATCACTGTAAGCTGCCTTTGGTCTTCTTTTCCAGCCTCTTTGTTCCATCATCCACAGACCATGTAACTGTCTGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGTGCTGCGCAGTGCTGCCCATGGCGCCCTGGCTGTCCGATAGCCCAAGCTGGGGTGGTCGTGTTTaGAGGAGGGGCCTCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: SLCCAVLPMAPWLSDSPSWGGRV*RRGLCT Trigger: AGTGCAGAGGCCCCTCCTGCAAACACGACCACCCCA...GCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCAACTCCAGGGCTGGAGCCTGCGCAGCACGTGGACCTGCAGGCTGCCACTGTGTGTGTGGTCCCTaGCCACAGGAGCACAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: TCNSRAGACAARGPAGCHCVCGP*PQEHRG Trigger: TCCCCTGTGCTCCTGTGGGCAGGGACCACACACACA...GTGGCAGCCTGCAGGTCCACGTGCTGCGCAGGCTCCAGCCCTGGAGTTGCAGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGTGCTGCGCAGTGCTGCCCATGGCGCCCTGGCTGTCCGATAGCCCAAGCCCGTTTCACCCCACATaGGGTCCTGGGGAGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SLCCAVLPMAPWLSDSPSPFHPT*GPGEQN Trigger: GTTCTGCTCCCCAGGACCCCATGTGGGGTGAAACGG...GCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCAACTCCAGGGCTGGAGCCTGCGCAGCACGTGGACCTGCAGGCTGCCACAGTAAAAGCAGGGGGTaGGGTGGTCGTGTTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TCNSRAGACAARGPAGCHSKSRG*GGRVCR Trigger: CCTGCAAACACGACCACCCCACCCCCTGCTTTTACT...GTGGCAGCCTGCAGGTCCACGTGCTGCGCAGGCTCCAGCCCTGGAGTTGCAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGCCTGCCTTGTGTGTGTaGTCCCTGCCCACAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: TPSASLPRGQSQRSHSFLPALCV*SLPTGA Trigger: TGCTCCTGTGGGCAGGGACCACACACACAAGGCAGG...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGGCAGTTGTGCCCCTATaGAGGAGTTTACCCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TPSASLPRGQSQRSHSFLAVVPL*RSLPQH Trigger: ATGCTGGGGTAAACTCCTCCATAGGGGCACAACTGC...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGAAAACTGGACAGTCTGCAACGCCAAAGGGGCAGAGTCTGTATCTCGGGTTTCCTTTCCCTTACGCTaGGGACAGGTGGGAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PENWTVCNAKGAESVSRVSFPLR*GQVGGA Trigger: GGCCCCTCCCACCTGTCCTCAGCGTAAGGGAAAGGA...AACCCGAGATACAGACTCTGCCCCTTTGGCGTTGCAGACTGTCCAGTTTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTGGTTCACTGGCCAGGACCTGGCCCACTaGACCATTTGGCCTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: FAGGASALSVGFAGWFTGQDLAH*TIWPVL Trigger: AAGCACAGGCCAAATGGTTCAGTGGGCCAGGTCCTG...GCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR GCA 90 bp | TACAGGTGTGGCTGCCTATGGACACAGCCTCTTGTCCCTCGCCCCATCTTCACCTGCCTCACAAGAGCCTaGAGCCTAGAGAGCTACCCA | + |
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Preference number: 2 (lower is better) Translates to: YRCGCLWTQPLVPRPIFTCLTRA*SLESYP Trigger: TGGGTAGCTCTCTAGGCTGCAGGCTCTTGTGAGGCA...GGTGAAGATGGGGCGAGGGACAAGAGGCTGTGTCCATAGGCAGCCACACCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR GCA 90 bp | TTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTGGTTCACTGGCACATGGAACTGGGGCTaGAGAGGACATGCCTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: FAGGASALSVGFAGWFTGTWNWG*RGHAWH Trigger: GTGCCAGGCATGTCCTCTGCAGCCCCAGTTCCATGT...GCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGAGTGAGGAAGGGCATTaGGACTTAGGGTCTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: TPSASLPRGQSQRSHSFLSEEGH*DLGSSS Trigger: TGAGGAAGACCCTAAGTCCCAATGCCCTTCCTCACT...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | ACGTCTCAGCTGTGCTCTTGTAGGAAGACCTGCAACTCCAGGGCTGGAGCCTGCACAGCTAAATTGAGCTaGCCCCAGAGCAGCCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: TSQLCSCRKTCNSRAGACTAKLS*PQSSPV Trigger: CACAGGGCTGCTCTGGGGCCAGCTCAATTTAGCTGT...GCAGGCTCCAGCCCTGGAGTTGCAGGTCTTCCTACAAGAGCACAGCTGAGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCAACTCCAGGGCTGGAGCCTGCGCAGCACGTGGACCTGCAGGCTGCCACAAGTTTCCAGAAAACTaGACAGTCTGCAACGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: TCNSRAGACAARGPAGCHKFPEN*TVCNAK Trigger: TTTGGCGTTGCAGACTGTCCAGTTTTCTGGAAACTT...GTGGCAGCCTGCAGGTCCACGTGCTGCGCAGGCTCCAGCCCTGGAGTTGCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAAACTGGACAGTCTGCAACGCCAAAGGGGCAGAGTCTGTATCTCGGGTTTGCCCATCCAGGACCTaGCCCACTGAACCATTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PENWTVCNAKGAESVSRVCPSRT*PTEPFG Trigger: GCCAAATGGTTCAGTGGGCCAGGTCCTGGATGGGCA...AACCCGAGATACAGACTCTGCCCCTTTGGCGTTGCAGACTGTCCAGTTTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAAACTGGACAGTCTGCAACGCCAAAGGGGCAGAGTCTGTATCTCGGGTTCAAAGGACATGGAACTaGGGCTGCAGAGGACATGCC | + |
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Preference number: 2 (lower is better) Translates to: PENWTVCNAKGAESVSRVQRTWN*GCRGHA Trigger: GGCATGTCCTCTGCAGCCCCAGTTCCATGTCCTTTG...AACCCGAGATACAGACTCTGCCCCTTTGGCGTTGCAGACTGTCCAGTTTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAAACTGGACAGTCTGCAACGCCAAAGGGGCAGAGTCTGTATCTCGGGTTGATTGGCAAAGGACATaGAACTGGGGCTGCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: PENWTVCNAKGAESVSRVDWQRT*NWGCRG Trigger: TCCTCTGCAGCCCCAGTTCCATGTCCTTTGCCAATC...AACCCGAGATACAGACTCTGCCCCTTTGGCGTTGCAGACTGTCCAGTTTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTCCTTTCCCTTACGCTGAGGACAGGTGGGAGGGGCCTTTTCCAGCTCTTATAGGACCCAAGAACTaGAGTGTAAGCTCCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: KAPFPYAEDRWEGPFPALIGPKN*SVSSFV Trigger: TACAAAGGAGCTTACACTCCAGTTCTTGGGTCCTAT...AAGAGCTGGAAAAGGCCCCTCCCACCTGTCCTCAGCGTAAGGGAAAGGAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTGGTTCACTGGCATGGAACAAAGAGGCTaGAAAAGAAGACCAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: FAGGASALSVGFAGWFTGMEQRG*KRRPKA Trigger: TGCCTTTGGTCTTCTTTTCCAGCCTCTTTGTTCCAT...GCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGAGGCTGGAAAAGAAGACCAAAGGCAGCTTACAGTGATTGGCAAAGGACTGAGCACGGGCAGGTaGAGGGGTTTTGACAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: NKEAGKEDQRQLTVIGKGLSTGR*RGFDRK Trigger: CTTCCTGTCAAAACCCCTCCACCTGCCCGTGCTCAG...TCCTTTGCCAATCACTGTAAGCTGCCTTTGGTCTTCTTTTCCAGCCTCTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CCA 90 bp | ACGTCTCAGCTGTGCTCTTGTAGGAAGACCTGCAACTCCAGGGCTGGAGCCTGCTGGCAAAAACTACTTTaGATTCTTCCCAAGGTCATT | + |
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Preference number: 2 (lower is better) Translates to: TSQLCSCRKTCNSRAGACWQKLL*ILPKVI Trigger: AATGACCTTGGGAAGAATCCAAAGTAGTTTTTGCCA...GCAGGCTCCAGCCCTGGAGTTGCAGGTCTTCCTACAAGAGCACAGCTGAGACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR GCA 72 bp | TGCAGGCTGCCACCCACAGCCTGTGCTGCGCAGTGCTaGCCATGGCGCCCTGGCTGTCCGATAGCCCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: CRLPPTACAAQC*PWRPGCPIAQA Trigger: AGCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCTGTGGGTGGCAGCCTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 72 bp | CACAGCCTGTGCTGCGCAGTGCTGCCCATGGCGCCCTaGCTGTCCGATAGCCCAAGCTGCTGTGGCCACTCC | + |
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Preference number: 3 (lower is better) Translates to: HSLCCAVLPMAP*LSDSPSCCGHS Trigger: GGAGTGGCCACAGCAGCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCTGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR TCA 72 bp | GGCAAAGCCAGCGAAGCCACAGCTTCCTGCTCCGCGTaGGCAGCACGACAACTGTCAGAACTTACGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: GKASEATASCSA*AARQLSELTAM Trigger: CATGGCCGTAAGTTCTGACAGTTGTCGTGCTGCTCACGCGGAGCAGGAAGCTGTGGCTTCGCTGGCTTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR GCA 72 bp | TTGGCAAAGGACATGGAACTGGGGCTGCAGAGGACATaGCTGGCACCATCTGTAGCAAGGCAGCGGTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LAKDMELGLQRT*LAPSVARQRCS Trigger: GCTGCACCGCTGCCTTGCTACAGATGGTGCCAGGCATGTCCTCTGCAGCCCCAGTTCCATGTCCTTTGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CAA 90 bp | TTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTGGTTCACTGGCTGCTTTGGGTTCTGTTaGCCCATCCAGGACCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: FAGGASALSVGFAGWFTGCFGFC*PIQDLA Trigger: GGCCAGGTCCTGGATGGGCAAACAGAACCCAAAGCA...GCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 72 bp | GTGAGGGCTGAAGGGAGCGTCATAGGACCCAAGAACTaGAGTGTAAGCTCCTTTGTACCTCCCCCTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: VRAEGSVIGPKN*SVSSFVPPPGA Trigger: AGCCCCAGGGGGAGGTACAAAGGAGCTTACACTCCAGTTCTTGGGTCCTATGACGCTCCCTTCAGCCCTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 72 bp | GGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTaGTTCACTGGCGCAGTACTGATCCACAGGCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: GGASALSVGFAG*FTGAVLIHRQL Trigger: CAACTGCCTGTGGATCAGTACTGCGCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 72 bp | TGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTaGTTGGTTCACTGGCGCAGTACTGATCCACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: CRRGLCTKRRVC*LVHWRSTDPQA Trigger: TGCCTGTGGATCAGTACTGCGCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR-3UTR CAA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGACGGCCATGCTGAAGTaGCAGTTTCATTCAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: TPSASLPRGQSQRSHSFLTAMLK*QFHSDA Trigger: AGCATCTGAATGAAACTGCAACTTCAGCATGGCCGT...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR GCA 72 bp | GTTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTaGTGGTTGGTTCACTGGCGCAGTACTGATCCACAG | + |
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Preference number: 3 (lower is better) Translates to: VCRRGLCTKRRV*WLVHWRSTDPQ Trigger: CTGTGGATCAGTACTGCGCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| 3UTR CCA 72 bp | CAGCTCTTCAGGAGAAGAACCCTGAGCACGGGCAGGTaGAGGGGTTTTGACAGGAAGCGTAGTTTGACCCGT | + |
|
Preference number: 3 (lower is better) Translates to: QLFRRRTLSTGR*RGFDRKRSLTR Trigger: ACGGGTCAAACTACGCTTCCTGTCAAAACCCCTCCACCTGCCCGTGCTCAGGGTTCTTCTCCTGAAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR GCA 72 bp | CCATCCAGGACCTGGCCCACTGAACCATTTGGCCTGTaGTTCTTGGAACAGAGTCCTTGGCTTACCAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PSRTWPTEPFGL*FLEQSPWLTSL Trigger: TAGGCTGGTAAGCCAAGGACTCTGTTCCAAGAAGCACAGGCCAAATGGTTCAGTGGGCCAGGTCCTGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR CCA 72 bp | CAAGAACTGGAGTGTAAGCTCCTTTGTACCTCCCCCTaGGGCTGTGAACAGCTAGCGGAGGTAGATCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QELECKLLCTSP*GCEQLAEVDPS Trigger: AGAGGGATCTACCTCCGCTAGCTGTTCACAGCCCCAGGGGGAGGTACAAAGGAGCTTACACTCCAGTTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR CCA 72 bp | CCTGTAAAGGCTCCTTTCCCTTACGCTGAGGACAGGTaGGAGGGGCCTTTTCCAGCTCTTCAGGAGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PVKAPFPYAEDR*EGPFPALQEKN Trigger: GTTCTTCTCCTGAAGAGCTGGAAAAGGCCCCTCCCACCTGTCCTCAGCGTAAGGGAAAGGAGCCTTTACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR CCA 72 bp | TGGGGGTCAGAGTGCCTAACCACAGCTAAATTGAGCTaGCCCCAGAGCAGCCCTGTGGTAAGCCATGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: WGSECLTTAKLS*PQSSPVVSHVV Trigger: TACAACATGGCTTACCACAGGGCTGCTCTGGGGCCAGCTCAATTTAGCTGTGGTTAGGCACTCTGACCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR CCA 72 bp | CCTAGTGCTTTGGGTTCTGTTTGCCCATCCAGGACCTaGCCCACTGAACCATTTGGCCTGTGCTTCTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSALGSVCPSRT*PTEPFGLCFLE Trigger: TTCCAAGAAGCACAGGCCAAATGGTTCAGTGGGCCAGGTCCTGGATGGGCAAACAGAACCCAAAGCACTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR CCA 72 bp | TACTTGAAACAGCATCAGCCTCCGTTTCACCCCACATaGGGTCCTGGGGAGCAGAACCTTCCAATGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YLKQHQPPFHPT*GPGEQNLPMKA Trigger: TGCCTTCATTGGAAGGTTCTGCTCCCCAGGACCCCATGTGGGGTGAAACGGAGGCTGATGCTGTTTCAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTGGTTCACTGGCTGTATTCCTAGTGCTTaGGGTTCTGTTTGCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: FAGGASALSVGFAGWFTGCIPSA*GSVCPS Trigger: GGATGGGCAAACAGAACCCAAAGCACTAGGAATACA...GCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR TCA 72 bp | GAACAGCTGAGGGGCCCAGATCTGTCCCTTACAAATTaGCTGCAGAACAGGGTCCCCTCACTTAACTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EQLRGPDLSLTN*LQNRVPSLNSG Trigger: TCCAGAGTTAAGTGAGGGGACCCTGTTCTGCAGTCAATTTGTAAGGGACAGATCTGGGCCCCTCAGCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR TCA 72 bp | GAGCAGCACGACAACTGTCAGAACTTACGGCCATGCTaGAGTTGCAGTTTCATTCAGATGCTACCTAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: EQHDNCQNLRPC*SCSFIQMLPKV Trigger: AACTTTAGGTAGCATCTGAATGAAACTGCAACTTCAGCATGGCCGTAAGTTCTGACAGTTGTCGTGCTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGCAACTCCAGGGCTGGAGCCTGCGCAGCACGTGGACCTGCAGGCTGCCACTGGTCCGCCTGGGCCTaGGCACCTGGACTGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCNSRAGACAARGPAGCHWSAWA*APGLSG Trigger: CCCAGACAGTCCAGGTGCCCAGGCCCAGGCGGACCA...GTGGCAGCCTGCAGGTCCACGTGCTGCGCAGGCTCCAGCCCTGGAGTTGCAGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR TCA 90 bp | AGCCTGTGCTGCGCAGTGCTGCCCATGGCGCCCTGGCTGTCCGATAGCCCAAGCGGCCAAGGCAGCAGGTaGAGAGGGCTCCACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCCAVLPMAPWLSDSPSGQGSR*RGLHIQ Trigger: CTGGATGTGGAGCCCTCTTCACCTGCTGCCTTGGCC...GCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | AGCCTGTGCTGCGCAGTGCTGCCCATGGCGCCCTGGCTGTCCGATAGCCCAAGCTACCACACCCCAGACTaGCCTCTCCACCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLCCAVLPMAPWLSDSPSYHTPD*PLHPRL Trigger: CAGCCTGGGGTGGAGAGGGCAGTCTGGGGTGTGGTA...GCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGGGGGTGGCCTGCGCTTaGCTGGCTCTCCCCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPSASLPRGQSQRSHSFLGVACA*LALPSV Trigger: GACTGAGGGGAGAGCCAGCCAAGCGCAGGCCACCCC...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR CAA 72 bp | GGTGCAGCTTTCCCCATCCGTCCGTCTGCTCCTGCCTaGTGTGTGTGGTCCCTGCCCACAGGAGCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAAFPIRPSAPA*CVWSLPTGAQG Trigger: CCCCTGTGCTCCTGTGGGCAGGGACCACACACACAAGGCAGGAGCAGACGGACGGATGGGGAAAGCTGCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTGGTTCACTGGCGTCAGCCGGGGCAGGTaGTCCGCCTGGGCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FAGGASALSVGFAGWFTGVSRGR*SAWAWA Trigger: TGCCCAGGCCCAGGCGGACCACCTGCCCCGGCTGAC...GCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | AGCCTGTGCTGCGCAGTGCTGCCCATGGCGCCCTGGCTGTCCGATAGCCCAAGCGGCACACGCTTATGTTaGTGCTGTCCAGGAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLCCAVLPMAPWLSDSPSGTRLC*CCPGGT Trigger: TGTCCCTCCTGGACAGCAGCAACATAAGCGTGTGCC...GCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGCAACTCCAGGGCTGGAGCCTGCGCAGCACGTGGACCTGCAGGCTGCCACTGCTTCCAGCAGCTCTaGAGACAGCCCTTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCNSRAGACAARGPAGCHCFQQL*RQPFFR Trigger: CCTGAAGAAGGGCTGTCTGCAGAGCTGCTGGAAGCA...GTGGCAGCCTGCAGGTCCACGTGCTGCGCAGGCTCCAGCCCTGGAGTTGCAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGCAGGCTGGCTGTGTCTaGCGGCTCCTCAGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSASLPRGQSQRSHSFLQAGCV*RLLSLC Trigger: GCACAGACTGAGGAGCCGGCAGACACAGCCAGCCTG...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGCGCCCCACATGTTGCTaGGCACCACCTCTACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSASLPRGQSQRSHSFLRPTCC*APPLPR Trigger: GCGAGGTAGAGGTGGTGCCCAGCAACATGTGGGGCG...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTGGTTCACTGGCGGCAGGTGGTCCGCCTaGGCCTGGGCACCTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FAGGASALSVGFAGWFTGGRWSA*AWAPGL Trigger: CAGTCCAGGTGCCCAGGCCCAGGCGGACCACCTGCC...GCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGTGGCCTGCGCTTGGCTaGCTCTCCCCTCAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSASLPRGQSQRSHSFLWPALG*LSPQSL Trigger: CAGAGACTGAGGGGAGAGCCAGCCAAGCGCAGGCCA...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCTCCTTTCCCTTACGCTGAGGACAGGTGGGAGGGGCCTTTTCCAGCTCTTGGATCTGGGGTGGCCTaGGCTTGGCTGGCTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KAPFPYAEDRWEGPFPALGSGVA*AWLALP Trigger: GGGGAGAGCCAGCCAAGCGCAGGCCACCCCAGATCC...AAGAGCTGGAAAAGGCCCCTCCCACCTGTCCTCAGCGTAAGGGAAAGGAGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TACAGGTGTGGCTGCCTATGGACACAGCCTCTTGTCCCTCGCCCCATCTTCACCCCCAGGCTCTGGATCTaGGGTGGCCTGCGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YRCGCLWTQPLVPRPIFTPRLWI*GGLRLA Trigger: AGCCAAGCGCAGGCCACCCCAGATCCAGAGCCTGGG...GGTGAAGATGGGGCGAGGGACAAGAGGCTGTGTCCATAGGCAGCCACACCTGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGCCTCAGTCTCTGCCCTaGAATCCAGGCTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPSASLPRGQSQRSHSFLPQSLP*NPGWLC Trigger: ACACAGCCAGCCTGGATTGCAGGGCAGAGACTGAGG...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TACAGGTGTGGCTGCCTATGGACACAGCCTCTTGTCCCTCGCCCCATCTTCACCTCCAGGCCTGCCTGCTaGGCCGGCGAGTTCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YRCGCLWTQPLVPRPIFTSRPAC*AGEFSC Trigger: ACAAGAGAACTCGCCGGCCCAGCAGGCAGGCCTGGA...GGTGAAGATGGGGCGAGGGACAAGAGGCTGTGTCCATAGGCAGCCACACCTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCTCCTTTCCCTTACGCTGAGGACAGGTGGGAGGGGCCTTTTCCAGCTCTTCAGTCAGCAGCGCCATaGCTGGGACTCCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAPFPYAEDRWEGPFPALQSAAP*LGLPGP Trigger: TGGGCCTGGGAGTCCCAGCCATGGCGCTGCTGACTG...AAGAGCTGGAAAAGGCCCCTCCCACCTGTCCTCAGCGTAAGGGAAAGGAGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCTCCTTTCCCTTACGCTGAGGACAGGTGGGAGGGGCCTTTTCCAGCTCTTGGCCGCCCCACATGTTaGTGGGCACCACCTCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: KAPFPYAEDRWEGPFPALGRPTC*WAPPLP Trigger: AGGTAGAGGTGGTGCCCAGCAACATGTGGGGCGGCC...AAGAGCTGGAAAAGGCCCCTCCCACCTGTCCTCAGCGTAAGGGAAAGGAGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | ACGTCTCAGCTGTGCTCTTGTAGGAAGACCTGCAACTCCAGGGCTGGAGCCTGCCGTGTTCGCTGGCCCTaGGGAAGCTACAGAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSQLCSCRKTCNSRAGACRVRWP*GSYRSA Trigger: TGCGCTTCTGTAGCTTCCGCAGGGCCAGCGAACACG...GCAGGCTCCAGCCCTGGAGTTGCAGGTCTTCCTACAAGAGCACAGCTGAGACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TACAGGTGTGGCTGCCTATGGACACAGCCTCTTGTCCCTCGCCCCATCTTCACCGCCACACGTGTTCGCTaGCCCTGCGGAAGCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: YRCGCLWTQPLVPRPIFTATRVR*PCGSYR Trigger: TCTGTAGCTTCCGCAGGGCCAGCGAACACGTGTGGC...GGTGAAGATGGGGCGAGGGACAAGAGGCTGTGTCCATAGGCAGCCACACCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TGTAAGCTCCTTTGTACCTCCCCCTGGGGCTGTGAACAGCTAGCGGAGGTAGATCAGCAGCGCCATGGCTaGGACTCCCAGGCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKLLCTSPWGCEQLAEVDQQRHG*DSQAQG Trigger: TCCTTGGGCCTGGGAGTCCCAGCCATGGCGCTGCTG...ATCTACCTCCGCTAGCTGTTCACAGCCCCAGGGGGAGGTACAAAGGAGCTTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTGGTTCACTGGCCCCTGCAATCCAGGCTaGCTGTGTCTGCCGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FAGGASALSVGFAGWFTGPCNPG*LCLPAP Trigger: AGGAGCCGGCAGACACAGCCAGCCTGGATTGCAGGG...GCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TGTAAGCTCCTTTGTACCTCCCCCTGGGGCTGTGAACAGCTAGCGGAGGTAGATTCACAGCCCAGGCTCTaGATCTGGGGTGGCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CKLLCTSPWGCEQLAEVDSQPRL*IWGGLR Trigger: GCGCAGGCCACCCCAGATCCAGAGCCTGGGCTGTGA...ATCTACCTCCGCTAGCTGTTCACAGCCCCAGGGGGAGGTACAAAGGAGCTTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR CAA 72 bp | GGCAGCTGGGGGTCAGAGTGCCTAACCACAGCTAAATaGAGCTGGCCCCAGAGCAGCCCTGTGGTAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSWGSECLTTAK*SWPQSSPVVSH Trigger: ATGGCTTACCACAGGGCTGCTCTGGGGCCAGCTCAATTTAGCTGTGGTTAGGCACTCTGACCCCCAGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | TACAGGTGTGGCTGCCTATGGACACAGCCTCTTGTCCCTCGCCCCATCTTCACCCGGCTCCTCAGTCTGTaGTTCCAGCAGCTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YRCGCLWTQPLVPRPIFTRLLSL*FQQLCR Trigger: TCTGCAGAGCTGCTGGAAGCACAGACTGAGGAGCCG...GGTGAAGATGGGGCGAGGGACAAGAGGCTGTGTCCATAGGCAGCCACACCTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCTCCTTTCCCTTACGCTGAGGACAGGTGGGAGGGGCCTTTTCCAGCTCTTTCTCCCCTCAGTCTCTaGCCTGCAATCCAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAPFPYAEDRWEGPFPALSPLSL*PAIQAG Trigger: GCCAGCCTGGATTGCAGGGCAGAGACTGAGGGGAGA...AAGAGCTGGAAAAGGCCCCTCCCACCTGTCCTCAGCGTAAGGGAAAGGAGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCTCCTTTCCCTTACGCTGAGGACAGGTGGGAGGGGCCTTTTCCAGCTCTTGAGTGCCAGGTGGTGTaGCACCGGGTGGCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAPFPYAEDRWEGPFPALECQVV*HRVASC Trigger: ACAAGAAGCCACCCGGTGCCACACCACCTGGCACTC...AAGAGCTGGAAAAGGCCCCTCCCACCTGTCCTCAGCGTAAGGGAAAGGAGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCAGGAGGGGCCTCTGCACTAAGCGTAGGGTTTGCTGGTTGGTTCACTGGCCTGGGCCTGGGCACCTaGACTGTCTGGGAAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FAGGASALSVGFAGWFTGLGLGT*TVWEGD Trigger: ATCTCCTTCCCAGACAGTCCAGGTGCCCAGGCCCAG...GCCAGTGAACCAACCAGCAAACCCTACGCTTAGTGCAGAGGCCCCTCCTGCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTGGCTTACCAGCCTAAGTACCCTGAACAGACAGTTACATGGTCTGTGGGTAGGGCTCCAGGCCTaGCTGCTGGGCCGGCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPWLTSLSTLNRQLHGLWVGLQA*LLGRRV Trigger: AACTCGCCGGCCCAGCAGGCAGGCCTGGAGCCCTAC...CCACAGACCATGTAACTGTCTGTTCAGGGTACTTAGGCTGGTAAGCCAAGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGATTGGCCTTCAGCAATaGCTTCAGCGTGTCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPSASLPRGQSQRSHSFLIGLQQ*LQRVVL Trigger: GAGAACGACACGCTGAAGGCATTGCTGAAGGCCAAT...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TGTAAGCTCCTTTGTACCTCCCCCTGGGGCTGTGAACAGCTAGCGGAGGTAGATGGTGGCTTCTTGTGCTaGCTGGAGGGTTGCGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CKLLCTSPWGCEQLAEVDGGFLC*LEGCVG Trigger: CCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACC...ATCTACCTCCGCTAGCTGTTCACAGCCCCAGGGGGAGGTACAAAGGAGCTTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGTCCCTTCGACCCAGGACCATGTATGTATTGTAGCAATGCCCGTGCCTAGCTGGAGTGCCAGGTaGTGTGGCACCGGGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CAVPSTQDHVCIVAMPVPSWSAR*CGTGWL Trigger: AAGCCACCCGGTGCCACACCACCTGGCACTCCAGCT...AGGCACGGGCATTGCTACAATACATACATGGTCCTGGGTCGAAGGGACAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR TCA 90 bp | ACGTCTCAGCTGTGCTCTTGTAGGAAGACCTGCAACTCCAGGGCTGGAGCCTGCAAAGGCAGTAAGTTGTaGGGTCGTAGCTGGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSQLCSCRKTCNSRAGACKGSKL*GRSWSA Trigger: GGCACTCCAGCTACGACCTCACAACTTACTGCCTTT...GCAGGCTCCAGCCCTGGAGTTGCAGGTCTTCCTACAAGAGCACAGCTGAGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR TCA 90 bp | TGTAAGCTCCTTTGTACCTCCCCCTGGGGCTGTGAACAGCTAGCGGAGGTAGATGTGGTAGGGCCTCCATaGAGTCACTCTGCCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CKLLCTSPWGCEQLAEVDVVGPP*SHSAWN Trigger: GTTCCAGGCAGAGTGACTTCATGGAGGCCCTACCAC...ATCTACCTCCGCTAGCTGTTCACAGCCCCAGGGGGAGGTACAAAGGAGCTTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAAAACTGGACAGTCTGCAACGCCAAAGGGGCAGAGTCTGTATCTCGGGTTCAGCACTGTGGAAGATaGCAGGCTGGGGCACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: PENWTVCNAKGAESVSRVQHCGR*QAGAHA Trigger: AGCGTGTGCCCCAGCCTGTCATCTTCCACAGTGCTG...AACCCGAGATACAGACTCTGCCCCTTTGGCGTTGCAGACTGTCCAGTTTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCTGTCCCTTCGACCCAGGACCATGTATGTATTGTAGCAATGCCCGTGCCTACTGGAGGTGGAGGCTaGAGCGGGATCTCCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CAVPSTQDHVCIVAMPVPTGGGG*SGISIA Trigger: TGCTATGGAGATCCCGCTTCAGCCTCCACCTCCAGT...AGGCACGGGCATTGCTACAATACATACATGGTCCTGGGTCGAAGGGACAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | TACAGGTGTGGCTGCCTATGGACACAGCCTCTTGTCCCTCGCCCCATCTTCACCTTGTTCAGCCTCGAGTaGCCGATGGTGATGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YRCGCLWTQPLVPRPIFTLFSLE*PMVMMK Trigger: CTTCATCATCACCATCGGGCACTCGAGGCTGAACAA...GGTGAAGATGGGGCGAGGGACAAGAGGCTGTGTCCATAGGCAGCCACACCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAAAACTGGACAGTCTGCAACGCCAAAGGGGCAGAGTCTGTATCTCGGGTTTGGAGGTCAGCACTGTaGAAGATGACAGGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PENWTVCNAKGAESVSRVWRSAL*KMTGWG Trigger: GCCCCAGCCTGTCATCTTCCACAGTGCTGACCTCCA...AACCCGAGATACAGACTCTGCCCCTTTGGCGTTGCAGACTGTCCAGTTTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGTGGCTGCCTATGGACACAGCCTCTTGTCCCTCGCCCCATCTTCACCTTCATGGTCTTCATGTTaGATACCTCCAGCTTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: TGVAAYGHSLLSLAPSSPSWSSC*IPPASP Trigger: CGGTGAAGCTGGAGGTATTCAACATGAAGACCATGA...AGGTGAAGATGGGGCGAGGGACAAGAGGCTGTGTCCATAGGCAGCCACACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | TGTAAGCTCCTTTGTACCTCCCCCTGGGGCTGTGAACAGCTAGCGGAGGTAGATTCCATGAAGTCACTCTaGCTGGAACCCAACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CKLLCTSPWGCEQLAEVDSMKSL*LEPNSG Trigger: CCCAGAGTTGGGTTCCAGGCAGAGTGACTTCATGGA...ATCTACCTCCGCTAGCTGTTCACAGCCCCAGGGGGAGGTACAAAGGAGCTTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR CAA 72 bp | AGGACCTGGCCCACTGAACCATTTGGCCTGTGCTTCTaGGAACAGAGTCCTTGGCTTACCAGCCTAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RTWPTEPFGLCF*EQSPWLTSLST Trigger: GGTACTTAGGCTGGTAAGCCAAGGACTCTGTTCCAAGAAGCACAGGCCAAATGGTTCAGTGGGCCAGGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTGGCTTACCAGCCTAAGTACCCTGAACAGACAGTTACATGGTCTGTGGTTCTCTTGTACCCCGTaGAGATGGAAGCCCTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPWLTSLSTLNRQLHGLWFSCTP*RWKPSP Trigger: CGGCGAGGGCTTCCATCTGCACGGGGTACAAGAGAA...CCACAGACCATGTAACTGTCTGTTCAGGGTACTTAGGCTGGTAAGCCAAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | AACAAAGAGGCTGGAAAAGAAGACCAAAGGCAGCTTACAGTGATTGGCAAAGGATACAGAAGCGCACGCTaGCTCCCAGGAGGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NKEAGKEDQRQLTVIGKGYRSAR*LPGGPG Trigger: GCCAGGGCCTCCTGGGAGCCAGCGTGCGCTTCTGTA...TCCTTTGCCAATCACTGTAAGCTGCCTTTGGTCTTCTTTTCCAGCCTCTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCTCCTTTCCCTTACGCTGAGGACAGGTGGGAGGGGCCTTTTCCAGCTCTTAGTAAAGAAGTCTTCTaGCTCCTGGAGAATCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAPFPYAEDRWEGPFPALSKEVF*LLENLV Trigger: GACCAGATTCTCCAGGAGTCAGAAGACTTCTTTACT...AAGAGCTGGAAAAGGCCCCTCCCACCTGTCCTCAGCGTAAGGGAAAGGAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR GCA 90 bp | AACAAAGAGGCTGGAAAAGAAGACCAAAGGCAGCTTACAGTGATTGGCAAAGGACCGGGTGGCTTCTTGTaGTGGCTGGAGGGTTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NKEAGKEDQRQLTVIGKGPGGFL*WLEGCV Trigger: AACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGG...TCCTTTGCCAATCACTGTAAGCTGCCTTTGGTCTTCTTTTCCAGCCTCTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAAAACTGGACAGTCTGCAACGCCAAAGGGGCAGAGTCTGTATCTCGGGTTAAGTCTTCTGACTCCTaGAGAATCTGGTCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PENWTVCNAKGAESVSRVKSSDS*RIWSEP Trigger: TGGCTCTGACCAGATTCTCCAGGAGTCAGAAGACTT...AACCCGAGATACAGACTCTGCCCCTTTGGCGTTGCAGACTGTCCAGTTTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | AACAAAGAGGCTGGAAAAGAAGACCAAAGGCAGCTTACAGTGATTGGCAAAGGATGGTGTGGCACCGGGTaGCTTCTTGTGCTGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKEAGKEDQRQLTVIGKGWCGTG*LLVLAG Trigger: TCCAGCCAGCACAAGAAGCCACCCGGTGCCACACCA...TCCTTTGCCAATCACTGTAAGCTGCCTTTGGTCTTCTTTTCCAGCCTCTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAAAAATCAGTACTAAGTTTCCAGAAAACTGGACAGTCTGCAACGCCAAAGCCGCTGCACTGGAGGTaGAGGCTGAAGCGGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQKSVLSFQKTGQSATPKPLHWR*RLKRDL Trigger: GAGATCCCGCTTCAGCCTCCACCTCCAGTGCAGCGG...CTTTGGCGTTGCAGACTGTCCAGTTTTCTGGAAACTTAGTACTGATTTTTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCTTGGCTTACCAGCCTAAGTACCCTGAACAGACAGTTACATGGTCTGTGGAGAGGCTTCCCCTCATaGGACTCAATGAGAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPWLTSLSTLNRQLHGLWRGFPS*DSMRVK Trigger: CTTTACTCTCATTGAGTCCCATGAGGGGAAGCCTCT...CCACAGACCATGTAACTGTCTGTTCAGGGTACTTAGGCTGGTAAGCCAAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAAAAATCAGTACTAAGTTTCCAGAAAACTGGACAGTCTGCAACGCCAAAGCACCCCAGGCTGCATTaGGAGTCACAGTCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQKSVLSFQKTGQSATPKHPRLH*ESQSPP Trigger: GGGAGGTGACTGTGACTCCCAATGCAGCCTGGGGTG...CTTTGGCGTTGCAGACTGTCCAGTTTTCTGGAAACTTAGTACTGATTTTTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAAAAATCAGTACTAAGTTTCCAGAAAACTGGACAGTCTGCAACGCCAAAGTCACCACCCCGCTCGTaGGAACTGCTGCTAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SQKSVLSFQKTGQSATPKSPPRS*ELLLEP Trigger: TGGTTCTAGCAGCAGTTCTCACGAGCGGGGTGGTGA...CTTTGGCGTTGCAGACTGTCCAGTTTTCTGGAAACTTAGTACTGATTTTTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| 3UTR CAA 72 bp | GTTCATGTTTGTTTTTCCAGTTTTATACACGGGCTTTaGTTACGCCTTCGTCCAGGTCTTTCTGCCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHVCFSSFIHGL*LRLRPGLSAVF Trigger: AAAGACGGCAGAAAGACCTGGACGAAGGCGTAACAAAAGCCCGTGTATAAAACTGGAAAAACAAACATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 90 bp | AGGCCATCGGGGAGAGTCAGCCGGGGCAGGTGGTCCGCCTGGGCCTaGGCACCTGGACTGTCTGGGAAGGAGATCTCAAACTCTGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPSGRVSRGRWSAWA*APGLSGKEISNSDP Trigger: AGGGTCAGAGTTTGAGATCTCCTTCCCAGACAGTCCAGGTGCCCAGGCCCAGGCGGACCACCTGCCCCGGCTGACTCTCCCCGATGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS GCA 90 bp | GGCTCTCCCCTCAGTCTCTGCCCTGCAATCCAGGCTGGCTGTGTCTaGCGGCTCCTCAGTCTGTGCTTCCAGCAGCTCTGCAGACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSPLSLCPAIQAGCV*RLLSLCFQQLCRQP Trigger: GGGCTGTCTGCAGAGCTGCTGGAAGCACAGACTGAGGAGCCGGCAGACACAGCCAGCCTGGATTGCAGGGCAGAGACTGAGGGGAGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 90 bp | CAGGTGAAGAGGGCTCCACATCCAGCACATGCCACACGTGTTCGCTaGCCCTGCGGAAGCTACAGAAGCGCACGCTGGCTCCCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QVKRAPHPAHATRVR*PCGSYRSARWLPGG Trigger: GCCTCCTGGGAGCCAGCGTGCGCTTCTGTAGCTTCCGCAGGGCCAGCGAACACGTGTGGCATGTGCTGGATGTGGAGCCCTCTTCACCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 90 bp | GATGTGAGGCCATCGGGGAGAGTCAGCCGGGGCAGGTGGTCCGCCTaGGCCTGGGCACCTGGACTGTCTGGGAAGGAGATCTCAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: DVRPSGRVSRGRWSA*AWAPGLSGKEISNS Trigger: AGAGTTTGAGATCTCCTTCCCAGACAGTCCAGGTGCCCAGGCCCAGGCGGACCACCTGCCCCGGCTGACTCTCCCCGATGGCCTCACATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 90 bp | GCGCTTGGCTGGCTCTCCCCTCAGTCTCTGCCCTGCAATCCAGGCTaGCTGTGTCTGCCGGCTCCTCAGTCTGTGCTTCCAGCAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALGWLSPQSLPCNPG*LCLPAPQSVLPAAL Trigger: CAGAGCTGCTGGAAGCACAGACTGAGGAGCCGGCAGACACAGCCAGCCTGGATTGCAGGGCAGAGACTGAGGGGAGAGCCAGCCAAGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS TCA 90 bp | TCCAGGAAGCCTGGGTCCATGACCCGCTGCACTGGAGGTGGAGGCTaGAGCGGGATCTCCATAGCACGCAGGCATCCCCCACAGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRKPGSMTRCTGGGG*SGISIARRHPPQSA Trigger: TGCTGACTGTGGGGGATGCCTGCGTGCTATGGAGATCCCGCTTCAGCCTCCACCTCCAGTGCAGCGGGTCATGGACCCAGGCTTCCTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTGTGCTGCGCAGTGCTGCCCATGGCGCCCTGGCTGTCCGATAGCCCAAGCACCGGCTTCTCCACATaGGCCTTCAGCAATGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLCCAVLPMAPWLSDSPSTGFST*AFSNAF Trigger: GAAGGCATTGCTGAAGGCCAATGTGGAGAAGCCGGT...GCTTGGGCTATCGGACAGCCAGGGCGCCATGGGCAGCACTGCGCAGCACAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CAA 90 bp | ACTCCTTCCGCCAGTCTTCCTCGCGGGCAAAGCCAGCGAAGCCACAGCTTCCTGCCACCCCAGGCTGCATaGGGAGTCACAGTCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPSASLPRGQSQRSHSFLPPQAA*GVTVTS Trigger: GGAGGTGACTGTGACTCCCAATGCAGCCTGGGGTGG...CAGGAAGCTGTGGCTTCGCTGGCTTTGCCCGCGAGGAAGACTGGCGGAAGGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 90 bp | GGGATCTCCATAGCACGCAGGCATCCCCCACAGTCAGCAGCGCCATaGCTGGGACTCCCAGGCCCAAGGAGCTGTCCCTCCATAAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GISIARRHPPQSAAP*LGLPGPRSCPSIKL Trigger: TAGCTTTATGGAGGGACAGCTCCTTGGGCCTGGGAGTCCCAGCCATGGCGCTGCTGACTGTGGGGGATGCCTGCGTGCTATGGAGATCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CAA 90 bp | ACGTCTCAGCTGTGCTCTTGTAGGAAGACCTGCAACTCCAGGGCTGGAGCCTGCTGGCCGCCCCACATGTaGCTGGGCACCACCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: TSQLCSCRKTCNSRAGACWPPHM*LGTTST Trigger: GGTAGAGGTGGTGCCCAGCAACATGTGGGGCGGCCA...GCAGGCTCCAGCCCTGGAGTTGCAGGTCTTCCTACAAGAGCACAGCTGAGACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS GCA 90 bp | CGAGTGCCCGATGGTGATGATGAAGTCGAAGTAGGGCTCCAGGCCTaGCTGCTGGGCCGGCGAGTTCTCTTGTACCCCGTGCAGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RVPDGDDEVEVGLQA*LLGRRVLLYPVQME Trigger: TTCCATCTGCACGGGGTACAAGAGAACTCGCCGGCCCAGCAGGCAGGCCTGGAGCCCTACTTCGACTTCATCATCACCATCGGGCACTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 90 bp | CTGGAGTGCCAGGTGGTGTGGCACCGGGTGGCTTCTTGTGCTGGCTaGAGGGTTGCGTTGGGATCCGATGCAGGTACCCATAACCAATAC | + |
|
Preference number: 5 (lower is better) Translates to: LECQVVWHRVASCAG*RVALGSDAGTHNQY Trigger: GTATTGGTTATGGGTACCTGCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGGTGCCACACCACCTGGCACTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 90 bp | TGGTGTGGCACCGGGTGGCTTCTTGTGCTGGCTGGAGGGTTGCGTTaGGATCCGATGCAGGTACCCATAACCAATACCACACCCCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: WCGTGWLLVLAGGLR*DPMQVPITNTTPQT Trigger: AGTCTGGGGTGTGGTATTGGTTATGGGTACCTGCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGGTGCCACACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS TCA 90 bp | ATGAAGTCACTCTGCCTGGAACCCAACTCTGGGCCAGAAGAGTCCTaGGGGATAGGCCAAGGTGGTGGGGCACCAAGAGGAAAGGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: MKSLCLEPNSGPEES*GIGQGGGAPRGKAV Trigger: TACTGCCTTTCCTCTTGGTGCCCCACCACCTTGGCCTATCCCTCAGGACTCTTCTGGCCCAGAGTTGGGTTCCAGGCAGAGTGACTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS GCA 90 bp | TCAGCACTGTGGAAGATGACAGGCTGGGGCACACGCTTATGTTGCTaGTGTCCAGGAGGGACATGCCTGATACATCCAGGAAGCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SALWKMTGWGTRLCC*CPGGTCLIHPGSLG Trigger: ACCCAGGCTTCCTGGATGTATCAGGCATGTCCCTCCTGGACAGCAGCAACATAAGCGTGTGCCCCAGCCTGTCATCTTCCACAGTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS GCA 90 bp | AGGTCAGCACTGTGGAAGATGACAGGCTGGGGCACACGCTTATGTTaGTGCTGTCCAGGAGGGACATGCCTGATACATCCAGGAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSALWKMTGWGTRLC*CCPGGTCLIHPGSL Trigger: CAGGCTTCCTGGATGTATCAGGCATGTCCCTCCTGGACAGCAGCAACATAAGCGTGTGCCCCAGCCTGTCATCTTCCACAGTGCTGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAAACTGGACAGTCTGCAACGCCAAAGGGGCAGAGTCTGTATCTCGGGTTGGGCACACGCTTATGTaGCTGCTGTCCAGGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PENWTVCNAKGAESVSRVGHTLM*LLSRRD Trigger: GTCCCTCCTGGACAGCAGCAACATAAGCGTGTGCCC...AACCCGAGATACAGACTCTGCCCCTTTGGCGTTGCAGACTGTCCAGTTTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS TCA 90 bp | TGCTGGGCACCACCTCTACCTCGCGCACCTTCATGGTCTTCATGTTaGATACCTCCAGCTTCACCGGCTTCTCCACATTGGCCTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CWAPPLPRAPSWSSC*IPPASPASPHWPSA Trigger: TGCTGAAGGCCAATGTGGAGAAGCCGGTGAAGCTGGAGGTATTCAACATGAAGACCATGAAGGTGCGCGAGGTAGAGGTGGTGCCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS GCA 90 bp | GAATACCTCCAGCTTCACCGGCTTCTCCACATTGGCCTTCAGCAATaGCTTCAGCGTGTCGTTCTCCTTGTTCAGCCTCGAGTGCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: EYLQLHRLLHIGLQQ*LQRVVLLVQPRVPD Trigger: ATCGGGCACTCGAGGCTGAACAAGGAGAACGACACGCTGAAGGCATTGCTGAAGGCCAATGTGGAGAAGCCGGTGAAGCTGGAGGTATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CAA 90 bp | AAGGCTCCTTTCCCTTACGCTGAGGACAGGTGGGAGGGGCCTTTTCCAGCTCTTTTCATGGTCTTCATGTaGAATACCTCCAGCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: KAPFPYAEDRWEGPFPALFMVFM*NTSSFT Trigger: GGTGAAGCTGGAGGTATTCAACATGAAGACCATGAA...AAGAGCTGGAAAAGGCCCCTCCCACCTGTCCTCAGCGTAAGGGAAAGGAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS-3UTR CAA 90 bp | AGTCAAAAATCAGTACTAAGTTTCCAGAAAACTGGACAGTCTGCAACGCCAAAGTGGGGTGGCCTGCGCTaGGCTGGCTCTCCCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQKSVLSFQKTGQSATPKWGGLR*AGSPLS Trigger: ACTGAGGGGAGAGCCAGCCAAGCGCAGGCCACCCCA...CTTTGGCGTTGCAGACTGTCCAGTTTTCTGGAAACTTAGTACTGATTTTTGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 72 bp | GATGTGAGGCCATCGGGGAGAGTCAGCCGGGGCAGGTaGTCCGCCTGGGCCTGGGCACCTGGACTGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DVRPSGRVSRGR*SAWAWAPGLSG Trigger: CCCAGACAGTCCAGGTGCCCAGGCCCAGGCGGACCACCTGCCCCGGCTGACTCTCCCCGATGGCCTCACATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 72 bp | TGCTGGGCCGGCGAGTTCTCTTGTACCCCGTGCAGATaGAAGCCCTCGCCGCCCGCCGGCTGCTCGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CWAGEFSCTPCR*KPSPPAGCSLL Trigger: AAGCAGCGAGCAGCCGGCGGGCGGCGAGGGCTTCCATCTGCACGGGGTACAAGAGAACTCGCCGGCCCAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS GCA 72 bp | GGTGGCCTGCGCTTGGCTGGCTCTCCCCTCAGTCTCTaGCCTGCAATCCAGGCTGGCTGTGTCTGCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGLRLAGSPLSL*PAIQAGCVCRL Trigger: GAGCCGGCAGACACAGCCAGCCTGGATTGCAGGGCAGAGACTGAGGGGAGAGCCAGCCAAGCGCAGGCCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 72 bp | GCCCAGGCTCTGGATCTGGGGTGGCCTGCGCTTGGCTaGCTCTCCCCTCAGTCTCTGCCCTGCAATCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AQALDLGWPALG*LSPQSLPCNPG Trigger: GCCTGGATTGCAGGGCAGAGACTGAGGGGAGAGCCAGCCAAGCGCAGGCCACCCCAGATCCAGAGCCTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS GCA 72 bp | CCTGCGCTTGGCTGGCTCTCCCCTCAGTCTCTGCCCTaGAATCCAGGCTGGCTGTGTCTGCCGGCTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PALGWLSPQSLP*NPGWLCLPAPQ Trigger: CTGAGGAGCCGGCAGACACAGCCAGCCTGGATTGCAGGGCAGAGACTGAGGGGAGAGCCAGCCAAGCGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 72 bp | GGGAGAGTCAGCCGGGGCAGGTGGTCCGCCTGGGCCTaGGCACCTGGACTGTCTGGGAAGGAGATCTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRVSRGRWSAWA*APGLSGKEISN Trigger: GTTTGAGATCTCCTTCCCAGACAGTCCAGGTGCCCAGGCCCAGGCGGACCACCTGCCCCGGCTGACTCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS TCA 72 bp | CCTGGGTCCATGACCCGCTGCACTGGAGGTGGAGGCTaGAGCGGGATCTCCATAGCACGCAGGCATCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PGSMTRCTGGGG*SGISIARRHPP Trigger: TGGGGGATGCCTGCGTGCTATGGAGATCCCGCTTCAGCCTCCACCTCCAGTGCAGCGGGTCATGGACCCAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS TCA 72 bp | CTGCAGACAGCCCTTCTTCAGGTGAGGCCGCAGATGTaGGGCCATCGGGGAGAGTCAGCCGGGGCAGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LQTALLQVRPQM*GHRGESAGAGG Trigger: ACCACCTGCCCCGGCTGACTCTCCCCGATGGCCTCACATCTGCGGCCTCACCTGAAGAAGGGCTGTCTGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS GCA 72 bp | GGAGTGCCAGGTGGTGTGGCACCGGGTGGCTTCTTGTaGTGGCTGGAGGGTTGCGTTGGGATCCGATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVPGGVAPGGFL*WLEGCVGIRCR Trigger: CCTGCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGGTGCCACACCACCTGGCACTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CAA 72 bp | GCTGGAGTGCCAGGTGGTGTGGCACCGGGTGGCTTCTaGTGCTGGCTGGAGGGTTGCGTTGGGATCCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: AGVPGGVAPGGF*CWLEGCVGIRC Trigger: GCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGGTGCCACACCACCTGGCACTCCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
||
| CDS CCA 72 bp | AGGGCTCCACATCCAGCACATGCCACACGTGTTCGCTaGCCCTGCGGAAGCTACAGAAGCGCACGCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RAPHPAHATRVR*PCGSYRSARWL Trigger: GAGCCAGCGTGCGCTTCTGTAGCTTCCGCAGGGCCAGCGAACACGTGTGGCATGTGCTGGATGTGGAGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CCA 72 bp | GTGCCAGGTGGTGTGGCACCGGGTGGCTTCTTGTGCTaGCTGGAGGGTTGCGTTGGGATCCGATGCAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: VPGGVAPGGFLC*LEGCVGIRCRY Trigger: GTACCTGCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGGTGCCACACCACCTGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CCA 72 bp | CAGGAAGCCTGGGTCCATGACCCGCTGCACTGGAGGTaGAGGCTGAAGCGGGATCTCCATAGCACGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QEAWVHDPLHWR*RLKRDLHSTQA Trigger: TGCCTGCGTGCTATGGAGATCCCGCTTCAGCCTCCACCTCCAGTGCAGCGGGTCATGGACCCAGGCTTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CAA 90 bp | GAGGTCGTAGCTGGAGTGCCAGGTGGTGTGGCACCGGGTGGCTTCTaGTGCTGGCTGGAGGGTTGCGTTGGGATCCGATGCAGGTACCCA | + |
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Preference number: 6 (lower is better) Translates to: EVVAGVPGGVAPGGF*CWLEGCVGIRCRYP Trigger: TGGGTACCTGCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGGTGCCACACCACCTGGCACTCCAGCTACGACCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS TCA 72 bp | GTCTGTGTAAGGGCACAGGCCGGCCAAGGCAGCAGGTaGAGAGGGCTCCACATCCAGCACATGCCACACGTG | + |
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Preference number: 6 (lower is better) Translates to: VCVRAQAGQGSR*RGLHIQHMPHV Trigger: CACGTGTGGCATGTGCTGGATGTGGAGCCCTCTTCACCTGCTGCCTTGGCCGGCCTGTGCCCTTACACAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS GCA 72 bp | CTCAGTCTCTGCCCTGCAATCCAGGCTGGCTGTGTCTaGCGGCTCCTCAGTCTGTGCTTCCAGCAGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSLCPAIQAGCV*RLLSLCFQQLC Trigger: GCAGAGCTGCTGGAAGCACAGACTGAGGAGCCGGCAGACACAGCCAGCCTGGATTGCAGGGCAGAGACTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CCA 72 bp | CAGGTGGTGTGGCACCGGGTGGCTTCTTGTGCTGGCTaGAGGGTTGCGTTGGGATCCGATGCAGGTACCCAT | + |
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Preference number: 6 (lower is better) Translates to: QVVWHRVASCAG*RVALGSDAGTH Trigger: ATGGGTACCTGCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGGTGCCACACCACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CCA 72 bp | TGGCTCTCCCCTCAGTCTCTGCCCTGCAATCCAGGCTaGCTGTGTCTGCCGGCTCCTCAGTCTGTGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: WLSPQSLPCNPG*LCLPAPQSVLP Trigger: TGGAAGCACAGACTGAGGAGCCGGCAGACACAGCCAGCCTGGATTGCAGGGCAGAGACTGAGGGGAGAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CAA 90 bp | GCCAGGTGGTGTGGCACCGGGTGGCTTCTTGTGCTGGCTGGAGGGTaGCGTTGGGATCCGATGCAGGTACCCATAACCAATACCACACCC | + |
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Preference number: 6 (lower is better) Translates to: ARWCGTGWLLVLAGG*RWDPMQVPITNTTP Trigger: GGGTGTGGTATTGGTTATGGGTACCTGCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGGTGCCACACCACCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS TCA 72 bp | CTCTGCCTGGAACCCAACTCTGGGCCAGAAGAGTCCTaGGGGATAGGCCAAGGTGGTGGGGCACCAAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LCLEPNSGPEES*GIGQGGGAPRG Trigger: TCCTCTTGGTGCCCCACCACCTTGGCCTATCCCTCAGGACTCTTCTGGCCCAGAGTTGGGTTCCAGGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS GCA 72 bp | ATCCAGGCTGGCTGTGTCTGCCGGCTCCTCAGTCTGTaGTTCCAGCAGCTCTGCAGACAGCCCTTCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: IQAGCVCRLLSL*FQQLCRQPFFR Trigger: CCTGAAGAAGGGCTGTCTGCAGAGCTGCTGGAAGCACAGACTGAGGAGCCGGCAGACACAGCCAGCCTGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CCA 72 bp | TACATCCAGGAAGCCTGGGTCCATGACCCGCTGCACTaGAGGTGGAGGCTGAAGCGGGATCTCCATAGCACG | + |
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Preference number: 6 (lower is better) Translates to: YIQEAWVHDPLH*RWRLKRDLHST Trigger: CGTGCTATGGAGATCCCGCTTCAGCCTCCACCTCCAGTGCAGCGGGTCATGGACCCAGGCTTCCTGGATGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CCA 72 bp | GGCCTCCATGAAGTCACTCTGCCTGGAACCCAACTCTaGGCCAGAAGAGTCCTGAGGGATAGGCCAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GLHEVTLPGTQL*ARRVLRDRPRW Trigger: CCACCTTGGCCTATCCCTCAGGACTCTTCTGGCCCAGAGTTGGGTTCCAGGCAGAGTGACTTCATGGAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CCA 72 bp | CAGCTGTGGAGGTCAGCACTGTGGAAGATGACAGGCTaGGGCACACGCTTATGTTGCTGCTGTCCAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: QLWRSALWKMTG*GTRLCCCCPGG Trigger: CCCTCCTGGACAGCAGCAACATAAGCGTGTGCCCCAGCCTGTCATCTTCCACAGTGCTGACCTCCACAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS TCA 72 bp | CACGCTTATGTTGCTGCTGTCCAGGAGGGACATGCCTaGTACATCCAGGAAGCCTGGGTCCATGACCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: HAYVAAVQEGHA*YIQEAWVHDPL Trigger: CAGCGGGTCATGGACCCAGGCTTCCTGGATGTATCAGGCATGTCCCTCCTGGACAGCAGCAACATAAGCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS TCA 72 bp | TCTGACCCTGACCACGTGGCTTCACCACCCCGCTCGTaGGAACTGCTGCTAGAACCAATGTCCTCTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SDPDHVASPPRS*ELLLEPMSSGP Trigger: AGGACCAGAGGACATTGGTTCTAGCAGCAGTTCTCACGAGCGGGGTGGTGAAGCCACGTGGTCAGGGTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CAA 72 bp | TGTGGCACCGGGTGGCTTCTTGTGCTGGCTGGAGGGTaGCGTTGGGATCCGATGCAGGTACCCATAACCAAT | + |
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Preference number: 6 (lower is better) Translates to: CGTGWLLVLAGG*RWDPMQVPITN Trigger: ATTGGTTATGGGTACCTGCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGGTGCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CAA 90 bp | GAGGTCAGCACTGTGGAAGATGACAGGCTGGGGCACACGCTTATGTaGCTGCTGTCCAGGAGGGACATGCCTGATACATCCAGGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: EVSTVEDDRLGHTLM*LLSRRDMPDTSRKP Trigger: AGGCTTCCTGGATGTATCAGGCATGTCCCTCCTGGACAGCAGCAACATAAGCGTGTGCCCCAGCCTGTCATCTTCCACAGTGCTGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CCA 72 bp | ACCGGGTGGCTTCTTGTGCTGGCTGGAGGGTTGCGTTaGGATCCGATGCAGGTACCCATAACCAATACCACA | + |
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Preference number: 6 (lower is better) Translates to: TGWLLVLAGGLR*DPMQVPITNTT Trigger: TGTGGTATTGGTTATGGGTACCTGCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAGAAGCCACCCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CAA 90 bp | TTGCTGGGCACCACCTCTACCTCGCGCACCTTCATGGTCTTCATGTaGAATACCTCCAGCTTCACCGGCTTCTCCACATTGGCCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLGTTSTSRTFMVFM*NTSSFTGFSTLAFS Trigger: GCTGAAGGCCAATGTGGAGAAGCCGGTGAAGCTGGAGGTATTCAACATGAAGACCATGAAGGTGCGCGAGGTAGAGGTGGTGCCCAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CCA 72 bp | AACCAATGTCCTCTGGTCCTGAGACTGAAACAGCTGTaGAGGTCAGCACTGTGGAAGATGACAGGCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: NQCPLVLRLKQL*RSALWKMTGWG Trigger: GCCCCAGCCTGTCATCTTCCACAGTGCTGACCTCCACAGCTGTTTCAGTCTCAGGACCAGAGGACATTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CAA 72 bp | ACTGTGGAAGATGACAGGCTGGGGCACACGCTTATGTaGCTGCTGTCCAGGAGGGACATGCCTGATACATCC | + |
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Preference number: 6 (lower is better) Translates to: TVEDDRLGHTLM*LLSRRDMPDTS Trigger: GGATGTATCAGGCATGTCCCTCCTGGACAGCAGCAACATAAGCGTGTGCCCCAGCCTGTCATCTTCCACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CAA 72 bp | TTGGCCTTCAGCAATGCCTTCAGCGTGTCGTTCTCCTaGTTCAGCCTCGAGTGCCCGATGGTGATGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: LAFSNAFSVSFS*FSLECPMVMMK Trigger: CTTCATCATCACCATCGGGCACTCGAGGCTGAACAAGGAGAACGACACGCTGAAGGCATTGCTGAAGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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| CDS CAA 90 bp | ATGGTCTTCATGTTGAATACCTCCAGCTTCACCGGCTTCTCCACATaGGCCTTCAGCAATGCCTTCAGCGTGTCGTTCTCCTTGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: MVFMLNTSSFTGFST*AFSNAFSVSFSLFS Trigger: GCTGAACAAGGAGAACGACACGCTGAAGGCATTGCTGAAGGCCAATGTGGAGAAGCCGGTGAAGCTGGAGGTATTCAACATGAAGACCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035099.9 |
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