Pregenerated sensors for GON7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091931Ensembl transcript IDs: ENSMUST00000173969.2, ENSMUST00000179263.2
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
Preference number: 1 (lower is better) Translates to: ILLRMVVSHHVVAGI*TLDLWKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR GCA 90 bp | TGGTTGCTGGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTCAACGATCATTT | + |
Preference number: 1 (lower is better) Translates to: WLLGFELWTFGRAVG*SYPLSHLTSPQRSF Trigger: AAATGATCGTTGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR CCA 90 bp | GCATCAGATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTT | + |
Preference number: 1 (lower is better) Translates to: ASDLVADGCEPPCGC*DLNFGPLEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR TCA 90 bp | TGGCAGCGCTCTGCTATCTTGGCTTTTTGTTTTGAGGCAAAGTCTTaGCATGCAGCACACAAGCTGGCCTCCAACTTTGAATTCTCCTGC | + |
Preference number: 1 (lower is better) Translates to: WQRSAILAFCFEAKS*HAAHKLASNFEFSC Trigger: GCAGGAGAATTCAAAGTTGGAGGCCAGCTTGTGTGCTGCATGTCAAGACTTTGCCTCAAAACAAAAAGCCAAGATAGCAGAGCGCTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR TCA 90 bp | GCAGGTGATGAAATGGCAGCGCTCTGCTATCTTGGCTTTTTGTTTTaGGGCAAAGTCTTGACATGCAGCACACAAGCTGGCCTCCAACTT | + |
Preference number: 1 (lower is better) Translates to: AGDEMAALCYLGFLF*GKVLTCSTQAGLQL Trigger: AAGTTGGAGGCCAGCTTGTGTGCTGCATGTCAAGACTTTGCCTCAAAACAAAAAGCCAAGATAGCAGAGCGCTGCCATTTCATCACCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR CCA 90 bp | CCAACTAGAGCACAGGTCTTCTGTAAGTTCCAGCAGGTGATGAAATaGCAGCGCTCTGCTATCTTGGCTTTTTGTTTTGAGGCAAAGTCT | + |
Preference number: 1 (lower is better) Translates to: PTRAQVFCKFQQVMK*QRSAILAFCFEAKS Trigger: AGACTTTGCCTCAAAACAAAAAGCCAAGATAGCAGAGCGCTGCCATTTCATCACCTGCTGGAACTTACAGAAGACCTGTGCTCTAGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR TCA 90 bp | GGAAGTTTGCTCTGTGATGAACTTGTTCCAATCAAACAAAAGAAATaGGTTCCCCAACTAGAGCACAGGTCTTCTGTAAGTTCCAGCAGG | + |
Preference number: 1 (lower is better) Translates to: GSLLCDELVPIKQKK*VPQLEHRSSVSSSR Trigger: CCTGCTGGAACTTACAGAAGACCTGTGCTCTAGTTGGGGAACTCATTTCTTTTGTTTGATTGGAACAAGTTCATCACAGAGCAAACTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR TCA 90 bp | AGGTCTCTGCAAATCCAAAGCGAGGCTGGTTTAACCGTTACATGGTaGCAATGTCTACAAAATAATTTTATTCCTATTAACAGAGCTAGG | + |
Preference number: 1 (lower is better) Translates to: RSLQIQSEAGLTVTW*QCLQNNFIPINRAR Trigger: CCTAGCTCTGTTAATAGGAATAAAATTATTTTGTAGACATTGTCACCATGTAACGGTTAAACCAGCCTCGCTTTGGATTTGCAGAGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179263.2 |
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3UTR-3UTR CCA 90 bp | GCACTGCTGAGGCAGAGTCTGGCAGGTCTCTGCAAATCCAAAGCGAGGCTGGTTGGAGAGATGGCTCCGTaGTTAAGAGCACCACCTACT | + |
Preference number: 2 (lower is better) Translates to: ALLRQSLAGLCKSKARLVGEMAP*LRAPPT Trigger: AGTAGGTGGTGCTCTTAACCACGGAGCCATCTCTCC...AACCAGCCTCGCTTTGGATTTGCAGAGACCTGCCAGACTCTGCCTCAGCAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179263.2 |
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3UTR CAA 90 bp | GATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
Preference number: 2 (lower is better) Translates to: DLVADGCEPPCGCWD*NFGPLEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR-3UTR GCA 90 bp | CCACCATGTGGTTGCTGGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGGCAAAGTCTTGACATaGAGCACACAAGCTGGCCTC | + |
Preference number: 2 (lower is better) Translates to: PPCGCWDLNFGPLEEQSGGKVLT*STQAGL Trigger: GAGGCCAGCTTGTGTGCTGCATGTCAAGACTTTGCC...ACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR-3UTR CCA 90 bp | GCATCAGATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAGCGCTCTGCTATCTTaGCTTTTTGTTTTGAGGCAA | + |
Preference number: 2 (lower is better) Translates to: ASDLVADGCEPPCGCWDLSALLS*LFVLRQ Trigger: TTGCCTCAAAACAAAAAGCCAAGATAGCAGAGCGCT...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATCTGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR-3UTR GCA 90 bp | CTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTTGGAAGAAACAAGGAAGTTTaGTCTGTGATGAACTTGTTC | + |
Preference number: 2 (lower is better) Translates to: LVADGCEPPCGCWDLNFGRNKEV*SVMNLF Trigger: GAACAAGTTCATCACAGAGCAAACTTCCTTGTTTCT...TCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR GCA 72 bp | GGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTCAA | + |
Preference number: 3 (lower is better) Translates to: GFELWTFGRAVG*SYPLSHLTSPQ Trigger: TTGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR TCA 72 bp | GGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCTCAACGATCATTTTAAA | + |
Preference number: 3 (lower is better) Translates to: GPLEEQSGALTH*AISPALNDHFK Trigger: TTTAAAATGATCGTTGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR CCA 72 bp | CCTATTAACAGAGCTAGGGCTGGAGAGATGGCTCCGTaGTTAAGAGCACCACCTACTTTTCCCCTGCATGTA | + |
Preference number: 3 (lower is better) Translates to: PINRARAGEMAP*LRAPPTFPLHV Trigger: TACATGCAGGGGAAAAGTAGGTGGTGCTCTTAACCACGGAGCCATCTCTCCAGCCCTAGCTCTGTTAATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179263.2 |
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3UTR CCA 72 bp | CTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCG | + |
Preference number: 3 (lower is better) Translates to: LVADGCEPPCGC*DLNFGPLEEQS Trigger: CGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR GCA 72 bp | GATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTTTGGACCTTTGGAAGAGCAG | + |
Preference number: 3 (lower is better) Translates to: DLVADGCEPPCG*WDLNFGPLEEQ Trigger: CTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR CCA 72 bp | GTTTTGAGGCAAAGTCTTGACATGCAGCACACAAGCTaGCCTCCAACTTTGAATTCTCCTGCCTCAGCCAGT | + |
Preference number: 3 (lower is better) Translates to: VLRQSLDMQHTS*PPTLNSPASAS Trigger: ACTGGCTGAGGCAGGAGAATTCAAAGTTGGAGGCCAGCTTGTGTGCTGCATGTCAAGACTTTGCCTCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR TCA 72 bp | GAAATGGCAGCGCTCTGCTATCTTGGCTTTTTGTTTTaGGGCAAAGTCTTGACATGCAGCACACAAGCTGGC | + |
Preference number: 3 (lower is better) Translates to: EMAALCYLGFLF*GKVLTCSTQAG Trigger: GCCAGCTTGTGTGCTGCATGTCAAGACTTTGCCTCAAAACAAAAAGCCAAGATAGCAGAGCGCTGCCATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR CCA 72 bp | GCACAGGTCTTCTGTAAGTTCCAGCAGGTGATGAAATaGCAGCGCTCTGCTATCTTGGCTTTTTGTTTTGAG | + |
Preference number: 3 (lower is better) Translates to: AQVFCKFQQVMK*QRSAILAFCFE Trigger: CTCAAAACAAAAAGCCAAGATAGCAGAGCGCTGCCATTTCATCACCTGCTGGAACTTACAGAAGACCTGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR TCA 72 bp | TCTGCTATCTTGGCTTTTTGTTTTGAGGCAAAGTCTTaGCATGCAGCACACAAGCTGGCCTCCAACTTTGAA | + |
Preference number: 3 (lower is better) Translates to: SAILAFCFEAKS*HAAHKLASNFE Trigger: TTCAAAGTTGGAGGCCAGCTTGTGTGCTGCATGTCAAGACTTTGCCTCAAAACAAAAAGCCAAGATAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR-3UTR CAA 90 bp | GAAGTTTGCTCTGTGATGAACTTGTTCCAATCAAACAAAAGAAATGAGTTCCCCTCTTGGCTTTTTGTTTaGAGGCAAAGTCTTGACATG | + |
Preference number: 3 (lower is better) Translates to: EVCSVMNLFQSNKRNEFPSWLFV*RQSLDM Trigger: CATGTCAAGACTTTGCCTCAAAACAAAAAGCCAAGA...GGGGAACTCATTTCTTTTGTTTGATTGGAACAAGTTCATCACAGAGCAAACTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR CAA 72 bp | GCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCT | + |
Preference number: 4 (lower is better) Translates to: ADGCEPPCGCWD*NFGPLEEQSGA Trigger: AGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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3UTR CAA 72 bp | GTAGTCTGTAGACACTCCAGAAGAGGGCATCAGATCTaGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCT | + |
Preference number: 4 (lower is better) Translates to: VVCRHSRRGHQI*LRMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATCTGATGCCCTCTTCTGGAGTGTCTACAGACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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CDS-3UTR CCA 90 bp | GCATCAGATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGTTAAGATGCTGGCTTTaGACGTTTTGCAGATGGTCC | + |
Preference number: 4 (lower is better) Translates to: ASDLVADGCEPPCGCWDLLRCWL*TFCRWS Trigger: GGACCATCTGCAAAACGTCCAAAGCCAGCATCTTAA...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATCTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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CDS-3UTR TCA 90 bp | AATGTCTACAAAATAATTTTATTCCTATTAACAGAGCTAGGGCTGGAGAGATGGTGGTTCCAGGGGATTTaGTGCCCTCTTCTGGCCTCC | + |
Preference number: 4 (lower is better) Translates to: NVYKIILFLLTELGLERWWFQGI*CPLLAS Trigger: GGAGGCCAGAAGAGGGCATCAAATCCCCTGGAACCA...CCATCTCTCCAGCCCTAGCTCTGTTAATAGGAATAAAATTATTTTGTAGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179263.2 |
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CDS-3UTR GCA 90 bp | TGTAGACACTCCAGAAGAGGGCATCAGATCTTGTTGCGGATGGTTGTGAGCCACGTTATTTTCATCTTCTaGATCATCTTCATCATCACC | + |
Preference number: 4 (lower is better) Translates to: CRHSRRGHQILLRMVVSHVIFIF*IIFIIT Trigger: GGTGATGATGAAGATGATGCAGAAGATGAAAATAAC...GTGGCTCACAACCATCCGCAACAAGATCTGATGCCCTCTTCTGGAGTGTCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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CDS-3UTR TCA 90 bp | GAAGTTTGCTCTGTGATGAACTTGTTCCAATCAAACAAAAGAAATGAGTTCCCCTGCAGATGGTCCATCTaGGTTAGTTCTACCAGAGTT | + |
Preference number: 4 (lower is better) Translates to: EVCSVMNLFQSNKRNEFPCRWSI*VSSTRV Trigger: AACTCTGGTAGAACTAACTCAGATGGACCATCTGCA...GGGGAACTCATTTCTTTTGTTTGATTGGAACAAGTTCATCACAGAGCAAACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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CDS CCA 90 bp | TCCGCTACCAACTCCTTCATCCGGACCACGCCCGCCGACAGGCTCTaGAGAGGGTCCGCGTCTCCCGACGCCTCACAGGACACTCGTAGC | + |
Preference number: 5 (lower is better) Translates to: SATNSFIRTTPADRL*RGSASPDASQDTRS Trigger: GCTACGAGTGTCCTGTGAGGCGTCGGGAGACGCGGACCCTCTCCAGAGCCTGTCGGCGGGCGTGGTCCGGATGAAGGAGTTGGTAGCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173969.2 ENSMUST00000179263.2 |
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CDS-3UTR CAA 90 bp | CCACCATGTGGTTGCTGGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTCTGGCTTTGGACGTTTaGCAGATGGTCCATCTGAGT | + |
Preference number: 5 (lower is better) Translates to: PPCGCWDLNFGPLEEQSGLALDV*QMVHLS Trigger: ACTCAGATGGACCATCTGCAAAACGTCCAAAGCCAG...ACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |
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CDS CCA 72 bp | AACTCCTTCATCCGGACCACGCCCGCCGACAGGCTCTaGAGAGGGTCCGCGTCTCCCGACGCCTCACAGGAC | + |
Preference number: 6 (lower is better) Translates to: NSFIRTTPADRL*RGSASPDASQD Trigger: GTCCTGTGAGGCGTCGGGAGACGCGGACCCTCTCCAGAGCCTGTCGGCGGGCGTGGTCCGGATGAAGGAGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173969.2 ENSMUST00000179263.2 |
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CDS CCA 72 bp | TGTAACTCTGGTTCCAGGGGATTTGATGCCCTCTTCTaGCCTCCGAAGGCACATCCAAAGCGTCGTCCGGAT | + |
Preference number: 6 (lower is better) Translates to: CNSGSRGFDALF*PPKAHPKRRPD Trigger: ATCCGGACGACGCTTTGGATGTGCCTTCGGAGGCCAGAAGAGGGCATCAAATCCCCTGGAACCAGAGTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179263.2 |
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CDS TCA 72 bp | AGATGCTGGCTTTGGACGTTTTGCAGATGGTCCATCTaGGTTAGTTCTACCAGAGTTATTTTCATCTTCTGC | + |
Preference number: 6 (lower is better) Translates to: RCWLWTFCRWSI*VSSTRVIFIFC Trigger: GCAGAAGATGAAAATAACTCTGGTAGAACTAACTCAGATGGACCATCTGCAAAACGTCCAAAGCCAGCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173969.2 |