RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GON7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000091931

Ensembl transcript IDs: ENSMUST00000173969.2, ENSMUST00000179263.2

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACT +
Preference number: 1 (lower is better)
Translates to: ILLRMVVSHHVVAGI*TLDLWKSSRVLLPT
Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR GCA 90 bp TGGTTGCTGGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTCAACGATCATTT +
Preference number: 1 (lower is better)
Translates to: WLLGFELWTFGRAVG*SYPLSHLTSPQRSF
Trigger: AAATGATCGTTGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR CCA 90 bp GCATCAGATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTT +
Preference number: 1 (lower is better)
Translates to: ASDLVADGCEPPCGC*DLNFGPLEEQSGAL
Trigger: AAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATCTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR TCA 90 bp TGGCAGCGCTCTGCTATCTTGGCTTTTTGTTTTGAGGCAAAGTCTTaGCATGCAGCACACAAGCTGGCCTCCAACTTTGAATTCTCCTGC +
Preference number: 1 (lower is better)
Translates to: WQRSAILAFCFEAKS*HAAHKLASNFEFSC
Trigger: GCAGGAGAATTCAAAGTTGGAGGCCAGCTTGTGTGCTGCATGTCAAGACTTTGCCTCAAAACAAAAAGCCAAGATAGCAGAGCGCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR TCA 90 bp GCAGGTGATGAAATGGCAGCGCTCTGCTATCTTGGCTTTTTGTTTTaGGGCAAAGTCTTGACATGCAGCACACAAGCTGGCCTCCAACTT +
Preference number: 1 (lower is better)
Translates to: AGDEMAALCYLGFLF*GKVLTCSTQAGLQL
Trigger: AAGTTGGAGGCCAGCTTGTGTGCTGCATGTCAAGACTTTGCCTCAAAACAAAAAGCCAAGATAGCAGAGCGCTGCCATTTCATCACCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR CCA 90 bp CCAACTAGAGCACAGGTCTTCTGTAAGTTCCAGCAGGTGATGAAATaGCAGCGCTCTGCTATCTTGGCTTTTTGTTTTGAGGCAAAGTCT +
Preference number: 1 (lower is better)
Translates to: PTRAQVFCKFQQVMK*QRSAILAFCFEAKS
Trigger: AGACTTTGCCTCAAAACAAAAAGCCAAGATAGCAGAGCGCTGCCATTTCATCACCTGCTGGAACTTACAGAAGACCTGTGCTCTAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR TCA 90 bp GGAAGTTTGCTCTGTGATGAACTTGTTCCAATCAAACAAAAGAAATaGGTTCCCCAACTAGAGCACAGGTCTTCTGTAAGTTCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: GSLLCDELVPIKQKK*VPQLEHRSSVSSSR
Trigger: CCTGCTGGAACTTACAGAAGACCTGTGCTCTAGTTGGGGAACTCATTTCTTTTGTTTGATTGGAACAAGTTCATCACAGAGCAAACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR TCA 90 bp AGGTCTCTGCAAATCCAAAGCGAGGCTGGTTTAACCGTTACATGGTaGCAATGTCTACAAAATAATTTTATTCCTATTAACAGAGCTAGG +
Preference number: 1 (lower is better)
Translates to: RSLQIQSEAGLTVTW*QCLQNNFIPINRAR
Trigger: CCTAGCTCTGTTAATAGGAATAAAATTATTTTGTAGACATTGTCACCATGTAACGGTTAAACCAGCCTCGCTTTGGATTTGCAGAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179263.2
3UTR-3UTR CCA 90 bp GCACTGCTGAGGCAGAGTCTGGCAGGTCTCTGCAAATCCAAAGCGAGGCTGGTTGGAGAGATGGCTCCGTaGTTAAGAGCACCACCTACT +
Preference number: 2 (lower is better)
Translates to: ALLRQSLAGLCKSKARLVGEMAP*LRAPPT
Trigger: AGTAGGTGGTGCTCTTAACCACGGAGCCATCTCTCC...AACCAGCCTCGCTTTGGATTTGCAGAGACCTGCCAGACTCTGCCTCAGCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179263.2
3UTR CAA 90 bp GATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCAC +
Preference number: 2 (lower is better)
Translates to: DLVADGCEPPCGCWD*NFGPLEEQSGALTH
Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR-3UTR GCA 90 bp CCACCATGTGGTTGCTGGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGGCAAAGTCTTGACATaGAGCACACAAGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: PPCGCWDLNFGPLEEQSGGKVLT*STQAGL
Trigger: GAGGCCAGCTTGTGTGCTGCATGTCAAGACTTTGCC...ACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR-3UTR CCA 90 bp GCATCAGATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAGCGCTCTGCTATCTTaGCTTTTTGTTTTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: ASDLVADGCEPPCGCWDLSALLS*LFVLRQ
Trigger: TTGCCTCAAAACAAAAAGCCAAGATAGCAGAGCGCT...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATCTGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR-3UTR GCA 90 bp CTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTTGGAAGAAACAAGGAAGTTTaGTCTGTGATGAACTTGTTC +
Preference number: 2 (lower is better)
Translates to: LVADGCEPPCGCWDLNFGRNKEV*SVMNLF
Trigger: GAACAAGTTCATCACAGAGCAAACTTCCTTGTTTCT...TCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR GCA 72 bp GGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTCAA +
Preference number: 3 (lower is better)
Translates to: GFELWTFGRAVG*SYPLSHLTSPQ
Trigger: TTGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR TCA 72 bp GGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCTCAACGATCATTTTAAA +
Preference number: 3 (lower is better)
Translates to: GPLEEQSGALTH*AISPALNDHFK
Trigger: TTTAAAATGATCGTTGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR CCA 72 bp CCTATTAACAGAGCTAGGGCTGGAGAGATGGCTCCGTaGTTAAGAGCACCACCTACTTTTCCCCTGCATGTA +
Preference number: 3 (lower is better)
Translates to: PINRARAGEMAP*LRAPPTFPLHV
Trigger: TACATGCAGGGGAAAAGTAGGTGGTGCTCTTAACCACGGAGCCATCTCTCCAGCCCTAGCTCTGTTAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179263.2
3UTR CCA 72 bp CTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCG +
Preference number: 3 (lower is better)
Translates to: LVADGCEPPCGC*DLNFGPLEEQS
Trigger: CGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR GCA 72 bp GATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTTTGGACCTTTGGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: DLVADGCEPPCG*WDLNFGPLEEQ
Trigger: CTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR CCA 72 bp GTTTTGAGGCAAAGTCTTGACATGCAGCACACAAGCTaGCCTCCAACTTTGAATTCTCCTGCCTCAGCCAGT +
Preference number: 3 (lower is better)
Translates to: VLRQSLDMQHTS*PPTLNSPASAS
Trigger: ACTGGCTGAGGCAGGAGAATTCAAAGTTGGAGGCCAGCTTGTGTGCTGCATGTCAAGACTTTGCCTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR TCA 72 bp GAAATGGCAGCGCTCTGCTATCTTGGCTTTTTGTTTTaGGGCAAAGTCTTGACATGCAGCACACAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: EMAALCYLGFLF*GKVLTCSTQAG
Trigger: GCCAGCTTGTGTGCTGCATGTCAAGACTTTGCCTCAAAACAAAAAGCCAAGATAGCAGAGCGCTGCCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR CCA 72 bp GCACAGGTCTTCTGTAAGTTCCAGCAGGTGATGAAATaGCAGCGCTCTGCTATCTTGGCTTTTTGTTTTGAG +
Preference number: 3 (lower is better)
Translates to: AQVFCKFQQVMK*QRSAILAFCFE
Trigger: CTCAAAACAAAAAGCCAAGATAGCAGAGCGCTGCCATTTCATCACCTGCTGGAACTTACAGAAGACCTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR TCA 72 bp TCTGCTATCTTGGCTTTTTGTTTTGAGGCAAAGTCTTaGCATGCAGCACACAAGCTGGCCTCCAACTTTGAA +
Preference number: 3 (lower is better)
Translates to: SAILAFCFEAKS*HAAHKLASNFE
Trigger: TTCAAAGTTGGAGGCCAGCTTGTGTGCTGCATGTCAAGACTTTGCCTCAAAACAAAAAGCCAAGATAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR-3UTR CAA 90 bp GAAGTTTGCTCTGTGATGAACTTGTTCCAATCAAACAAAAGAAATGAGTTCCCCTCTTGGCTTTTTGTTTaGAGGCAAAGTCTTGACATG +
Preference number: 3 (lower is better)
Translates to: EVCSVMNLFQSNKRNEFPSWLFV*RQSLDM
Trigger: CATGTCAAGACTTTGCCTCAAAACAAAAAGCCAAGA...GGGGAACTCATTTCTTTTGTTTGATTGGAACAAGTTCATCACAGAGCAAACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR CAA 72 bp GCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTTGGACCTTTGGAAGAGCAGTCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: ADGCEPPCGCWD*NFGPLEEQSGA
Trigger: AGCACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
3UTR CAA 72 bp GTAGTCTGTAGACACTCCAGAAGAGGGCATCAGATCTaGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: VVCRHSRRGHQI*LRMVVSHHVVA
Trigger: AGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATCTGATGCCCTCTTCTGGAGTGTCTACAGACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
CDS-3UTR CCA 90 bp GCATCAGATCTTGTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGTTAAGATGCTGGCTTTaGACGTTTTGCAGATGGTCC +
Preference number: 4 (lower is better)
Translates to: ASDLVADGCEPPCGCWDLLRCWL*TFCRWS
Trigger: GGACCATCTGCAAAACGTCCAAAGCCAGCATCTTAA...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGCAACAAGATCTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
CDS-3UTR TCA 90 bp AATGTCTACAAAATAATTTTATTCCTATTAACAGAGCTAGGGCTGGAGAGATGGTGGTTCCAGGGGATTTaGTGCCCTCTTCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NVYKIILFLLTELGLERWWFQGI*CPLLAS
Trigger: GGAGGCCAGAAGAGGGCATCAAATCCCCTGGAACCA...CCATCTCTCCAGCCCTAGCTCTGTTAATAGGAATAAAATTATTTTGTAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179263.2
CDS-3UTR GCA 90 bp TGTAGACACTCCAGAAGAGGGCATCAGATCTTGTTGCGGATGGTTGTGAGCCACGTTATTTTCATCTTCTaGATCATCTTCATCATCACC +
Preference number: 4 (lower is better)
Translates to: CRHSRRGHQILLRMVVSHVIFIF*IIFIIT
Trigger: GGTGATGATGAAGATGATGCAGAAGATGAAAATAAC...GTGGCTCACAACCATCCGCAACAAGATCTGATGCCCTCTTCTGGAGTGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
CDS-3UTR TCA 90 bp GAAGTTTGCTCTGTGATGAACTTGTTCCAATCAAACAAAAGAAATGAGTTCCCCTGCAGATGGTCCATCTaGGTTAGTTCTACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: EVCSVMNLFQSNKRNEFPCRWSI*VSSTRV
Trigger: AACTCTGGTAGAACTAACTCAGATGGACCATCTGCA...GGGGAACTCATTTCTTTTGTTTGATTGGAACAAGTTCATCACAGAGCAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
CDS CCA 90 bp TCCGCTACCAACTCCTTCATCCGGACCACGCCCGCCGACAGGCTCTaGAGAGGGTCCGCGTCTCCCGACGCCTCACAGGACACTCGTAGC +
Preference number: 5 (lower is better)
Translates to: SATNSFIRTTPADRL*RGSASPDASQDTRS
Trigger: GCTACGAGTGTCCTGTGAGGCGTCGGGAGACGCGGACCCTCTCCAGAGCCTGTCGGCGGGCGTGGTCCGGATGAAGGAGTTGGTAGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173969.2
ENSMUST00000179263.2
CDS-3UTR CAA 90 bp CCACCATGTGGTTGCTGGGATTTGAACTTTGGACCTTTGGAAGAGCAGTCGGGTCTGGCTTTGGACGTTTaGCAGATGGTCCATCTGAGT +
Preference number: 5 (lower is better)
Translates to: PPCGCWDLNFGPLEEQSGLALDV*QMVHLS
Trigger: ACTCAGATGGACCATCTGCAAAACGTCCAAAGCCAG...ACCCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2
CDS CCA 72 bp AACTCCTTCATCCGGACCACGCCCGCCGACAGGCTCTaGAGAGGGTCCGCGTCTCCCGACGCCTCACAGGAC +
Preference number: 6 (lower is better)
Translates to: NSFIRTTPADRL*RGSASPDASQD
Trigger: GTCCTGTGAGGCGTCGGGAGACGCGGACCCTCTCCAGAGCCTGTCGGCGGGCGTGGTCCGGATGAAGGAGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173969.2
ENSMUST00000179263.2
CDS CCA 72 bp TGTAACTCTGGTTCCAGGGGATTTGATGCCCTCTTCTaGCCTCCGAAGGCACATCCAAAGCGTCGTCCGGAT +
Preference number: 6 (lower is better)
Translates to: CNSGSRGFDALF*PPKAHPKRRPD
Trigger: ATCCGGACGACGCTTTGGATGTGCCTTCGGAGGCCAGAAGAGGGCATCAAATCCCCTGGAACCAGAGTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179263.2
CDS TCA 72 bp AGATGCTGGCTTTGGACGTTTTGCAGATGGTCCATCTaGGTTAGTTCTACCAGAGTTATTTTCATCTTCTGC +
Preference number: 6 (lower is better)
Translates to: RCWLWTFCRWSI*VSSTRVIFIFC
Trigger: GCAGAAGATGAAAATAACTCTGGTAGAACTAACTCAGATGGACCATCTGCAAAACGTCCAAAGCCAGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173969.2