Pregenerated sensors for GOLT1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030245Ensembl transcript IDs: ENSMUST00000032372.7
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCCCATCTTCGGACCTCAGGCCTCACAAGCCTGCCGCTGCTTCTaGCGCTGCTTCTGCCACAGCTGTTGGGACTTTGGAGGGCGTACA | + |
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Preference number: 1 (lower is better) Translates to: LPIFGPQASQACRCF*RCFCHSCWDFGGRT Trigger: TGTACGCCCTCCAAAGTCCCAACAGCTGTGGCAGAAGCAGCGGCAGAAGCAGCGGCAGGCTTGTGAGGCCTGAGGTCCGAAGATGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR GCA 90 bp | TATGGTGTGTATGGTTTAGGGTCCCAAAACTGCTCCAATAGCCTCTaGAGCAGGCTACTCCATGGTCAGAACGCTCTCTGCTCGGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: YGVYGLGSQNCSNSL*SRLLHGQNALCSAS Trigger: AGAGGCCGAGCAGAGAGCGTTCTGACCATGGAGTAGCCTGCTGCAGAGGCTATTGGAGCAGTTTTGGGACCCTAAACCATACACACCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR GCA 90 bp | TCACGGTTCCTGTGGGCAAACCAGCGGCAGACGATGGGAAGGTCATaGTTCCCCAGCGTCTTGTTTATAAGAAGCTATGGCCAATTTAGT | + |
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Preference number: 1 (lower is better) Translates to: SRFLWANQRQTMGRS*FPSVLFIRSYGQFS Trigger: ACTAAATTGGCCATAGCTTCTTATAAACAAGACGCTGGGGAAGCATGACCTTCCCATCGTCTGCCGCTGGTTTGCCCACAGGAACCGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR TCA 90 bp | ACTAAGGACTATGAGCCTCTCATTCTTCCCAGGTCCAGTGTTTTCTaGAATCAGACTGCTGAAAGGGATGCTTGCTGTAGTGTGAAAACC | + |
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Preference number: 1 (lower is better) Translates to: TKDYEPLILPRSSVF*NQTAERDACCSVKT Trigger: GGTTTTCACACTACAGCAAGCATCCCTTTCAGCAGTCTGATTTCAGAAAACACTGGACCTGGGAAGAATGAGAGGCTCATAGTCCTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR TCA 90 bp | ACAGGTCAGTTCTCAAAGCATAGCATTGACACGTCAGGAAAGGTGTaGCGTTTTGAGGAACATCAGACACAACGCCAGGTCTTTTATTAT | + |
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Preference number: 1 (lower is better) Translates to: TGQFSKHSIDTSGKV*RFEEHQTQRQVFYY Trigger: ATAATAAAAGACCTGGCGTTGTGTCTGATGTTCCTCAAAACGTCACACCTTTCCTGACGTGTCAATGCTATGCTTTGAGAACTGACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR TCA 90 bp | AACAACCTTTACCATGTTGCACACCTTCAACGTCACTGTAAGTTATaGAAGCAAGGTGGGAGACAATGGCCAGATTTCATTAAGAACCCA | + |
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Preference number: 1 (lower is better) Translates to: NNLYHVAHLQRHCKL*KQGGRQWPDFIKNP Trigger: TGGGTTCTTAATGAAATCTGGCCATTGTCTCCCACCTTGCTTTCATAACTTACAGTGACGTTGAAGGTGTGCAACATGGTAAAGGTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR GCA 90 bp | TATGGTGTGTATGGTTTAGGGTCCCAAAACTGCTCCAATAGCCTCTGCAGCAGGCGCTGCTTCTGCCGCTaGTTCTGCCACAGCTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: YGVYGLGSQNCSNSLCSRRCFCR*FCHSCW Trigger: CCAACAGCTGTGGCAGAAGCAGCGGCAGAAGCAGCG...CCTGCTGCAGAGGCTATTGGAGCAGTTTTGGGACCCTAAACCATACACACCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR GCA 90 bp | CTTCTACAGCAGCTGCACTCCAGAGAATTAGAAGGGAAAAGAAACACTGCAAGTGCCTGCCGCTGCTTCTaGCGCTGCTTCTGCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: LLQQLHSRELEGKRNTASACRCF*RCFCHS Trigger: GCTGTGGCAGAAGCAGCGGCAGAAGCAGCGGCAGGC...ACTTGCAGTGTTTCTTTTCCCTTCTAATTCTCTGGAGTGCAGCTGCTGTAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR GCA 90 bp | TTTTTGTTAAAGACAGAAGGCTCCTTTAAGAAGGGGGTAGGGTTGAGGGAACTCCAGGCCTCACAAGCCTaGCGCTGCTTCTGCCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: FLLKTEGSFKKGVGLRELQASQA*RCFCRC Trigger: GCAGCGGCAGAAGCAGCGGCAGGCTTGTGAGGCCTG...GAGTTCCCTCAACCCTACCCCCTTCTTAAAGGAGCCTTCTGTCTTTAACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR GCA 90 bp | ATGGGAAGGTCATGCTTCCCCAGCGTCTTGTTTATAAGAAGCTATGGCCAATTTTCACAAGCCTGCCGCTaGTTCTGCCGCTGCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: MGRSCFPSVLFIRSYGQFSQACR*FCRCFC Trigger: GCAGAAGCAGCGGCAGAAGCAGCGGCAGGCTTGTGA...AAATTGGCCATAGCTTCTTATAAACAAGACGCTGGGGAAGCATGACCTTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR GCA 90 bp | AACTCATATGGTGTGTATGGTTTAGGGTCCCAAAACTGCTCCAATAGCCTCTGCTTCTGCCGCTGCTTCTaGCACAGCTGTTGGGACTTT | + |
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Preference number: 2 (lower is better) Translates to: NSYGVYGLGSQNCSNSLCFCRCF*HSCWDF Trigger: AAAGTCCCAACAGCTGTGGCAGAAGCAGCGGCAGAA...GCAGAGGCTATTGGAGCAGTTTTGGGACCCTAAACCATACACACCATATGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR CCA 90 bp | TTGAACATGACAGAAACACTTAAGGCTAAGGACTGGACCTTGTCTTCCACCTGGTTCTGCCACAGCTGTTaGGACTTTGGAGGGCGTACA | + |
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Preference number: 2 (lower is better) Translates to: LNMTETLKAKDWTLSSTWFCHSC*DFGGRT Trigger: TGTACGCCCTCCAAAGTCCCAACAGCTGTGGCAGAA...CCAGGTGGAAGACAAGGTCCAGTCCTTAGCCTTAAGTGTTTCTGTCATGTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR CAA 90 bp | GAAGTAATCAGCCCCTCTCACAGTCACACAACAACCTTTACCATGTaGCACACCTTCAACGTCACTGTAAGTTATGAAAGCAAGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: EVISPSHSHTTTFTM*HTFNVTVSYESKVG Trigger: TCCCACCTTGCTTTCATAACTTACAGTGACGTTGAAGGTGTGCAACATGGTAAAGGTTGTTGTGTGACTGTGAGAGGGGCTGATTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTAGAGTATATGATTTGACCATGAGACTTCTACAGCAGCTGCACTCCAGAACGGCACAGATTGTATaGACACACCCAGGCCACACT | + |
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Preference number: 2 (lower is better) Translates to: IVRVYDLTMRLLQQLHSRTAQIV*THPGHT Trigger: AGTGTGGCCTGGGTGTGTTCATACAATCTGTGCCGT...TCTGGAGTGCAGCTGCTGTAGAAGTCTCATGGTCAAATCATATACTCTAACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR TCA 90 bp | TACAGGGCACCTTACACAGGTCAGTTCTCAAAGCATAGCATTGACACGTCAGGATATCCCATGAGCTATTaGGGTAGGATTCTCCACTTA | + |
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Preference number: 2 (lower is better) Translates to: YRAPYTGQFSKHSIDTSGYPMSY*GRILHL Trigger: TAAGTGGAGAATCCTACCTCAATAGCTCATGGGATA...TCCTGACGTGTCAATGCTATGCTTTGAGAACTGACCTGTGTAAGGTGCCCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR GCA 90 bp | TTGAACATGACAGAAACACTTAAGGCTAAGGACTGGACCTTGTCTTCCACCTGGGGCTGTTTCACATACTaGAGCAAGACTAGGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: LNMTETLKAKDWTLSSTWGCFTY*SKTRKQ Trigger: CTGTTTCCTAGTCTTGCTGCAGTATGTGAAACAGCC...CCAGGTGGAAGACAAGGTCCAGTCCTTAGCCTTAAGTGTTTCTGTCATGTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR CAA 90 bp | AAATATACAGGGCACCTTACACAGGTCAGTTCTCAAAGCATAGCATaGACACGTCAGGAAAGGTGTGACGTTTTGAGGAACATCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: KYTGHLTQVSSQSIA*TRQERCDVLRNIRH Trigger: GTGTCTGATGTTCCTCAAAACGTCACACCTTTCCTGACGTGTCAATGCTATGCTTTGAGAACTGACCTGTGTAAGGTGCCCTGTATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR GCA 90 bp | CTTCTACAGCAGCTGCACTCCAGAGAATTAGAAGGGAAAAGAAACACTGCAAGTGCTGAAAGGGATGCTTaGTGTAGTGTGAAAACCACT | + |
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Preference number: 2 (lower is better) Translates to: LLQQLHSRELEGKRNTASAERDA*CSVKTT Trigger: AGTGGTTTTCACACTACAGCAAGCATCCCTTTCAGC...ACTTGCAGTGTTTCTTTTCCCTTCTAATTCTCTGGAGTGCAGCTGCTGTAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTAGAGTATATGATTTGACCATGAGACTTCTACAGCAGCTGCACTCCAGAACGTCAGGAAAGGTGTaGCGTTTTGAGGAACATCAG | + |
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Preference number: 2 (lower is better) Translates to: IVRVYDLTMRLLQQLHSRTSGKV*RFEEHQ Trigger: CTGATGTTCCTCAAAACGTCACACCTTTCCTGACGT...TCTGGAGTGCAGCTGCTGTAGAAGTCTCATGGTCAAATCATATACTCTAACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR TCA 90 bp | CATGAGACTTCTACAGCAGCTGCACTCCAGAGAATTAGAAGGGAAAAGAAACACGGACTTCTAGAAGTCTaGGGGCTGCTTTGTTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: HETSTAAALQRIRREKKHGLLEV*GLLCLK Trigger: TTTTAAACAAAGCAGCCCTCAGACTTCTAGAAGTCC...GTGTTTCTTTTCCCTTCTAATTCTCTGGAGTGCAGCTGCTGTAGAAGTCTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR CCA 90 bp | CTTCTACAGCAGCTGCACTCCAGAGAATTAGAAGGGAAAAGAAACACTGCAAGTGTTATGAAAGCAAGGTaGGAGACAATGGCCAGATTT | + |
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Preference number: 2 (lower is better) Translates to: LLQQLHSRELEGKRNTASVMKAR*ETMARF Trigger: AAATCTGGCCATTGTCTCCCACCTTGCTTTCATAAC...ACTTGCAGTGTTTCTTTTCCCTTCTAATTCTCTGGAGTGCAGCTGCTGTAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR TCA 90 bp | CATGAGACTTCTACAGCAGCTGCACTCCAGAGAATTAGAAGGGAAAAGAAACACTCTTTTATTATCCCATaGGCTATTGAGGTAGGATTC | + |
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Preference number: 2 (lower is better) Translates to: HETSTAAALQRIRREKKHSFIIP*AIEVGF Trigger: GAATCCTACCTCAATAGCTCATGGGATAATAAAAGA...GTGTTTCTTTTCCCTTCTAATTCTCTGGAGTGCAGCTGCTGTAGAAGTCTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR CAA 90 bp | AATCAGACTGCTGAAAGGGATGCTTGCTGTAGTGTGAAAACCACTTaGATAGAGTCATGTCTACAAAGGAGTAAAATGGCAGACTCTTAT | + |
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Preference number: 2 (lower is better) Translates to: NQTAERDACCSVKTT*IESCLQRSKMADSY Trigger: ATAAGAGTCTGCCATTTTACTCCTTTGTAGACATGACTCTATCAAAGTGGTTTTCACACTACAGCAAGCATCCCTTTCAGCAGTCTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR CAA 90 bp | GGGAAAAGAAACACTGCAAGTATGTTTCTGTTACAGAAGATACACTaGAACATGACAGAAACACTTAAGGCTAAGGACTGGACCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GKRNTASMFLLQKIH*NMTETLKAKDWTLS Trigger: AGACAAGGTCCAGTCCTTAGCCTTAAGTGTTTCTGTCATGTTCAAGTGTATCTTCTGTAACAGAAACATACTTGCAGTGTTTCTTTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR CAA 90 bp | GTCAGACAAGTGTATTTACAATACGCCATTGTTAGAGTATATGATTaGACCATGAGACTTCTACAGCAGCTGCACTCCAGAGAATTAGAA | + |
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Preference number: 2 (lower is better) Translates to: VRQVYLQYAIVRVYD*TMRLLQQLHSRELE Trigger: TTCTAATTCTCTGGAGTGCAGCTGCTGTAGAAGTCTCATGGTCAAATCATATACTCTAACAATGGCGTATTGTAAATACACTTGTCTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR CCA 90 bp | AAGTACCCTTTTATTGAGGTCAGACAAGTGTATTTACAATACGCCATTGTTAGACTCATATGGTGTGTATaGTTTAGGGTCCCAAAACTG | + |
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Preference number: 2 (lower is better) Translates to: KYPFIEVRQVYLQYAIVRLIWCV*FRVPKL Trigger: CAGTTTTGGGACCCTAAACCATACACACCATATGAG...TCTAACAATGGCGTATTGTAAATACACTTGTCTGACCTCAATAAAAGGGTACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR CCA 90 bp | AAGTACCCTTTTATTGAGGTCAGACAAGTGTATTTACAATACGCCATTGTTAGACATGGAGAACTCATATaGTGTGTATGGTTTAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: KYPFIEVRQVYLQYAIVRHGELI*CVWFRV Trigger: GACCCTAAACCATACACACCATATGAGTTCTCCATG...TCTAACAATGGCGTATTGTAAATACACTTGTCTGACCTCAATAAAAGGGTACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR TCA 90 bp | ATTAAGAACCCAAAGAGAAAAACTACATCATGGCATGGAGAACTCATATGGTGTACTTTAATTTTGTGCTaGGTATTCTTCCAAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: IKNPKRKTTSWHGELIWCTLILC*VFFQRA Trigger: AGCCCTTTGGAAGAATACTCAGCACAAAATTAAAGT...ACACCATATGAGTTCTCCATGCCATGATGTAGTTTTTCTCTTTGGGTTCTTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR GCA 72 bp | CCTCAGGCCTCACAAGCCTGCCGCTGCTTCTGCCGCTaGTTCTGCCACAGCTGTTGGGACTTTGGAGGGCGT | + |
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Preference number: 3 (lower is better) Translates to: PQASQACRCFCR*FCHSCWDFGGR Trigger: ACGCCCTCCAAAGTCCCAACAGCTGTGGCAGAAGCAGCGGCAGAAGCAGCGGCAGGCTTGTGAGGCCTGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR TCA 72 bp | CGCTCTCTGCTCGGCCTCTGCACGGCACAGATTGTATaGACACACCCAGGCCACACTCGAGAGATCTGCACT | + |
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Preference number: 3 (lower is better) Translates to: RSLLGLCTAQIV*THPGHTREICT Trigger: AGTGCAGATCTCTCGAGTGTGGCCTGGGTGTGTTCATACAATCTGTGCCGTGCAGAGGCCGAGCAGAGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR GCA 72 bp | CTGTGGGCAAACCAGCGGCAGACGATGGGAAGGTCATaGTTCCCCAGCGTCTTGTTTATAAGAAGCTATGGC | + |
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Preference number: 3 (lower is better) Translates to: LWANQRQTMGRS*FPSVLFIRSYG Trigger: GCCATAGCTTCTTATAAACAAGACGCTGGGGAAGCATGACCTTCCCATCGTCTGCCGCTGGTTTGCCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR TCA 72 bp | CTGCTTTGTTTAAAAGCAGAGCCTCGAGGTTCTGCTTaGGAAAAGCCGCGAGGGAGGCCAAGCAGTTTAGGC | + |
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Preference number: 3 (lower is better) Translates to: LLCLKAEPRGSA*EKPRGRPSSLG Trigger: GCCTAAACTGCTTGGCCTCCCTCGCGGCTTTTCTCAAGCAGAACCTCGAGGCTCTGCTTTTAAACAAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR CAA 90 bp | AACTCATATGGTGTGTATGGTTTAGGGTCCCAAAACTGCTCCAATAGCCTCTGCTCTGCACGGCACAGATaGTATGAACACACCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: NSYGVYGLGSQNCSNSLCSARHR*YEHTQA Trigger: GGCCTGGGTGTGTTCATACAATCTGTGCCGTGCAGA...GCAGAGGCTATTGGAGCAGTTTTGGGACCCTAAACCATACACACCATATGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR TCA 72 bp | TTCTCAAAGCATAGCATTGACACGTCAGGAAAGGTGTaGCGTTTTGAGGAACATCAGACACAACGCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: FSKHSIDTSGKV*RFEEHQTQRQV Trigger: GACCTGGCGTTGTGTCTGATGTTCCTCAAAACGTCACACCTTTCCTGACGTGTCAATGCTATGCTTTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR CAA 90 bp | ATGGGAAGGTCATGCTTCCCCAGCGTCTTGTTTATAAGAAGCTATGGCCAATTTACAGCTGTTGGGACTTaGGAGGGCGTACATTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: MGRSCFPSVLFIRSYGQFTAVGT*EGVHFK Trigger: TTTAAAATGTACGCCCTCCAAAGTCCCAACAGCTGT...AAATTGGCCATAGCTTCTTATAAACAAGACGCTGGGGAAGCATGACCTTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR CAA 90 bp | TTTTTGTTAAAGACAGAAGGCTCCTTTAAGAAGGGGGTAGGGTTGAGGGAACTCTCTCAAAGCATAGCATaGACACGTCAGGAAAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: FLLKTEGSFKKGVGLRELSQSIA*TRQERC Trigger: ACACCTTTCCTGACGTGTCAATGCTATGCTTTGAGA...GAGTTCCCTCAACCCTACCCCCTTCTTAAAGGAGCCTTCTGTCTTTAACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR CAA 90 bp | ATTGTTAGAGTATATGATTTGACCATGAGACTTCTACAGCAGCTGCACTCCAGAAGTCTGAGGGCTGCTTaGTTTAAAAGCAGAGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: IVRVYDLTMRLLQQLHSRSLRAA*FKSRAS Trigger: CGAGGCTCTGCTTTTAAACAAAGCAGCCCTCAGACT...TCTGGAGTGCAGCTGCTGTAGAAGTCTCATGGTCAAATCATATACTCTAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR TCA 72 bp | TACCATGTTGCACACCTTCAACGTCACTGTAAGTTATaGAAGCAAGGTGGGAGACAATGGCCAGATTTCATT | + |
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Preference number: 3 (lower is better) Translates to: YHVAHLQRHCKL*KQGGRQWPDFI Trigger: AATGAAATCTGGCCATTGTCTCCCACCTTGCTTTCATAACTTACAGTGACGTTGAAGGTGTGCAACATGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR TCA 72 bp | AACATCAGACACAACGCCAGGTCTTTTATTATCCCATaGGCTATTGAGGTAGGATTCTCCACTTATCGAGTT | + |
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Preference number: 3 (lower is better) Translates to: NIRHNARSFIIP*AIEVGFSTYRV Trigger: AACTCGATAAGTGGAGAATCCTACCTCAATAGCTCATGGGATAATAAAAGACCTGGCGTTGTGTCTGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR CCA 72 bp | AAGAGAAAAACTACATCATGGCATGGAGAACTCATATaGTGTGTATGGTTTAGGGTCCCAAAACTGCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: KRKTTSWHGELI*CVWFRVPKLLQ Trigger: TTGGAGCAGTTTTGGGACCCTAAACCATACACACCATATGAGTTCTCCATGCCATGATGTAGTTTTTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR-3UTR CAA 90 bp | AGTATGTTTCTGTTACAGAAGATACACTTGAACATGACAGAAACACTTAAGGCTAGTGTGAAAACCACTTaGATAGAGTCATGTCTACAA | + |
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Preference number: 3 (lower is better) Translates to: SMFLLQKIHLNMTETLKASVKTT*IESCLQ Trigger: TTGTAGACATGACTCTATCAAAGTGGTTTTCACACT...AGCCTTAAGTGTTTCTGTCATGTTCAAGTGTATCTTCTGTAACAGAAACATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR CAA 72 bp | CAGAACGCTCTCTGCTCGGCCTCTGCACGGCACAGATaGTATGAACACACCCAGGCCACACTCGAGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: QNALCSASARHR*YEHTQATLERS Trigger: AGATCTCTCGAGTGTGGCCTGGGTGTGTTCATACAATCTGTGCCGTGCAGAGGCCGAGCAGAGAGCGTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS-3UTR GCA 90 bp | CATGAGACTTCTACAGCAGCTGCACTCCAGAGAATTAGAAGGGAAAAGAAACACGTGGCCTTCACCTTGTaGCTCTGGAAGAAGAATCTG | + |
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Preference number: 4 (lower is better) Translates to: HETSTAAALQRIRREKKHVAFTL*LWKKNL Trigger: CAGATTCTTCTTCCAGAGGCACAAGGTGAAGGCCAC...GTGTTTCTTTTCCCTTCTAATTCTCTGGAGTGCAGCTGCTGTAGAAGTCTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS-3UTR CCA 90 bp | ATGGGAAGGTCATGCTTCCCCAGCGTCTTGTTTATAAGAAGCTATGGCCAATTTAAAGCCAACGACCACTaGGAAAAAGCCCCTGAACAA | + |
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Preference number: 4 (lower is better) Translates to: MGRSCFPSVLFIRSYGQFKANDH*EKAPEQ Trigger: TTGTTCAGGGGCTTTTTCCCAGTGGTCGTTGGCTTT...AAATTGGCCATAGCTTCTTATAAACAAGACGCTGGGGAAGCATGACCTTCCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS-3UTR TCA 90 bp | TTTTTGTTAAAGACAGAAGGCTCCTTTAAGAAGGGGGTAGGGTTGAGGGAACTCTCTGGAAGAAGAATCTaGACGTTCTCTCGAGACCAA | + |
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Preference number: 4 (lower is better) Translates to: FLLKTEGSFKKGVGLRELSGRRI*TFSRDQ Trigger: TTGGTCTCGAGAGAACGTTCAGATTCTTCTTCCAGA...GAGTTCCCTCAACCCTACCCCCTTCTTAAAGGAGCCTTCTGTCTTTAACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS-3UTR TCA 90 bp | AGTATGTTTCTGTTACAGAAGATACACTTGAACATGACAGAAACACTTAAGGCTTCAGAGGCCAACCAATaGGGACCACGAACACACCGC | + |
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Preference number: 4 (lower is better) Translates to: SMFLLQKIHLNMTETLKASEANQ*GPRTHR Trigger: GCGGTGTGTTCGTGGTCCTCATTGGTTGGCCTCTGA...AGCCTTAAGTGTTTCTGTCATGTTCAAGTGTATCTTCTGTAACAGAAACATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS-3UTR TCA 90 bp | CTTCTACAGCAGCTGCACTCCAGAGAATTAGAAGGGAAAAGAAACACTGCAAGTCTGGGAAAAAGCCCCTaGACAAGAGAAAGAATCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLQQLHSRELEGKRNTASLGKSP*TRERIH Trigger: ATGGATTCTTTCTCTTGTTCAGGGGCTTTTTCCCAG...ACTTGCAGTGTTTCTTTTCCCTTCTAATTCTCTGGAGTGCAGCTGCTGTAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS-3UTR CCA 90 bp | ATGGGAAGGTCATGCTTCCCCAGCGTCTTGTTTATAAGAAGCTATGGCCAATTTTTCACCTTGTGCCTCTaGAAGAAGAATCTGAACGTT | + |
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Preference number: 4 (lower is better) Translates to: MGRSCFPSVLFIRSYGQFFTLCL*KKNLNV Trigger: AACGTTCAGATTCTTCTTCCAGAGGCACAAGGTGAA...AAATTGGCCATAGCTTCTTATAAACAAGACGCTGGGGAAGCATGACCTTCCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS-3UTR CCA 90 bp | ATTAAGAACCCAAAGAGAAAAACTACATCATGGCATGGAGAACTCATATGGTGTCCAGGAAAAACCCAGTaGCCTTCACCTTGTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: IKNPKRKTTSWHGELIWCPGKTQ*PSPCAS Trigger: AGAGGCACAAGGTGAAGGCCACTGGGTTTTTCCTGG...ACACCATATGAGTTCTCCATGCCATGATGTAGTTTTTCTCTTTGGGTTCTTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR CAA 72 bp | GCTGAAAGGGATGCTTGCTGTAGTGTGAAAACCACTTaGATAGAGTCATGTCTACAAAGGAGTAAAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: AERDACCSVKTT*IESCLQRSKMA Trigger: TGCCATTTTACTCCTTTGTAGACATGACTCTATCAAAGTGGTTTTCACACTACAGCAAGCATCCCTTTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS-3UTR GCA 90 bp | AAGTACCCTTTTATTGAGGTCAGACAAGTGTATTTACAATACGCCATTGTTAGACCCATGCCAATTTTCTaGGTATCCGTGAGGGAGATC | + |
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Preference number: 4 (lower is better) Translates to: KYPFIEVRQVYLQYAIVRPMPIF*VSVREI Trigger: GATCTCCCTCACGGATACGCAGAAAATTGGCATGGG...TCTAACAATGGCGTATTGTAAATACACTTGTCTGACCTCAATAAAAGGGTACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| 3UTR CAA 72 bp | GTGTATTTACAATACGCCATTGTTAGAGTATATGATTaGACCATGAGACTTCTACAGCAGCTGCACTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VYLQYAIVRVYD*TMRLLQQLHSR Trigger: TCTGGAGTGCAGCTGCTGTAGAAGTCTCATGGTCAAATCATATACTCTAACAATGGCGTATTGTAAATACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS-3UTR GCA 90 bp | ATTAAGAACCCAAAGAGAAAAACTACATCATGGCATGGAGAACTCATATGGTGTAAATTTCGAAGATCATaGCTATCAGAGGCCAACCAA | + |
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Preference number: 4 (lower is better) Translates to: IKNPKRKTTSWHGELIWCKFRRS*LSEANQ Trigger: TTGGTTGGCCTCTGATAGGCATGATCTTCGAAATTT...ACACCATATGAGTTCTCCATGCCATGATGTAGTTTTTCTCTTTGGGTTCTTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS TCA 90 bp | GGAAAAACCCAGTGGCCTTCACCTTGTGCCTCTGGAAGAAGAATCTaGACGTTCTCTCGAGACCAATTACAAAAGCCAAGCCGGCCACAA | + |
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Preference number: 5 (lower is better) Translates to: GKTQWPSPCASGRRI*TFSRDQLQKPSRPQ Trigger: TTGTGGCCGGCTTGGCTTTTGTAATTGGTCTCGAGAGAACGTTCAGATTCTTCTTCCAGAGGCACAAGGTGAAGGCCACTGGGTTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS CCA 90 bp | AACACACCGCCCAGGAAAAACCCAGTGGCCTTCACCTTGTGCCTCTaGAAGAAGAATCTGAACGTTCTCTCGAGACCAATTACAAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: NTPPRKNPVAFTLCL*KKNLNVLSRPITKA Trigger: GGCTTTTGTAATTGGTCTCGAGAGAACGTTCAGATTCTTCTTCCAGAGGCACAAGGTGAAGGCCACTGGGTTTTTCCTGGGCGGTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS TCA 90 bp | AGAATCCATAAATTTCGAAGATCATGCCTATCAGAGGCCAACCAATaGGGACCACGAACACACCGCCCAGGAAAAACCCAGTGGCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RIHKFRRSCLSEANQ*GPRTHRPGKTQWPS Trigger: TGAAGGCCACTGGGTTTTTCCTGGGCGGTGTGTTCGTGGTCCTCATTGGTTGGCCTCTGATAGGCATGATCTTCGAAATTTATGGATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS-3UTR CAA 90 bp | AGTATGTTTCTGTTACAGAAGATACACTTGAACATGACAGAAACACTTAAGGCTCCAGTGGCCTTCACCTaGTGCCTCTGGAAGAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: SMFLLQKIHLNMTETLKAPVAFT*CLWKKN Trigger: ATTCTTCTTCCAGAGGCACAAGGTGAAGGCCACTGG...AGCCTTAAGTGTTTCTGTCATGTTCAAGTGTATCTTCTGTAACAGAAACATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS CAA 72 bp | AACACACCGCCCAGGAAAAACCCAGTGGCCTTCACCTaGTGCCTCTGGAAGAAGAATCTGAACGTTCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: NTPPRKNPVAFT*CLWKKNLNVLS Trigger: CGAGAGAACGTTCAGATTCTTCTTCCAGAGGCACAAGGTGAAGGCCACTGGGTTTTTCCTGGGCGGTGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS CAA 90 bp | AGGACCACGAACACACCGCCCAGGAAAAACCCAGTGGCCTTCACCTaGTGCCTCTGGAAGAAGAATCTGAACGTTCTCTCGAGACCAATT | + |
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Preference number: 6 (lower is better) Translates to: RTTNTPPRKNPVAFT*CLWKKNLNVLSRPI Trigger: AATTGGTCTCGAGAGAACGTTCAGATTCTTCTTCCAGAGGCACAAGGTGAAGGCCACTGGGTTTTTCCTGGGCGGTGTGTTCGTGGTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS TCA 72 bp | AAATTTCGAAGATCATGCCTATCAGAGGCCAACCAATaGGGACCACGAACACACCGCCCAGGAAAAACCCAG | + |
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Preference number: 6 (lower is better) Translates to: KFRRSCLSEANQ*GPRTHRPGKTQ Trigger: CTGGGTTTTTCCTGGGCGGTGTGTTCGTGGTCCTCATTGGTTGGCCTCTGATAGGCATGATCTTCGAAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS CCA 72 bp | CCCAGGAAAAACCCAGTGGCCTTCACCTTGTGCCTCTaGAAGAAGAATCTGAACGTTCTCTCGAGACCAATT | + |
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Preference number: 6 (lower is better) Translates to: PRKNPVAFTLCL*KKNLNVLSRPI Trigger: AATTGGTCTCGAGAGAACGTTCAGATTCTTCTTCCAGAGGCACAAGGTGAAGGCCACTGGGTTTTTCCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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| CDS TCA 72 bp | CAGTGGCCTTCACCTTGTGCCTCTGGAAGAAGAATCTaGACGTTCTCTCGAGACCAATTACAAAAGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: QWPSPCASGRRI*TFSRDQLQKPS Trigger: GCTTGGCTTTTGTAATTGGTCTCGAGAGAACGTTCAGATTCTTCTTCCAGAGGCACAAGGTGAAGGCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032372.7 |
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