Pregenerated sensors for GOLT1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000103421Ensembl transcript IDs: ENSMUST00000094557.7
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGTGTTGCAGGCCTGCCCTAAGGCTGGGATGGATACCTCAGGCTaGAGACATCAACGCCAAATCTCAGATACATTCACAGCTTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: VVLQACPKAGMDTSG*RHQRQISDTFTAWG Trigger: TCCCCAAGCTGTGAATGTATCTGAGATTTGGCGTTGATGTCTGCAGCCTGAGGTATCCATCCCAGCCTTAGGGCAGGCCTGCAACACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR TCA 90 bp | ATGGGTATCATGGCCAGGATCTCTGCTCCTGGCGGCCTCTTGAGATaGCTCGAGGGTTTAAGATCGATCACTCAGCTCCATCTTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: MGIMARISAPGGLLR*LEGLRSITQLHLSS Trigger: AGAAGAAAGATGGAGCTGAGTGATCGATCTTAAACCCTCGAGTCATCTCAAGAGGCCGCCAGGAGCAGAGATCCTGGCCATGATACCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR CCA 90 bp | CGAGGGTTTAAGATCGATCACTCAGCTCCATCTTTCTTCTGGACTTaGAGATGCCCGTGTGTCATGGTAAGTAAGTCAGTGCTGGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RGFKIDHSAPSFFWT*RCPCVMVSKSVLGR Trigger: CCTCCCCAGCACTGACTTACTTACCATGACACACGGGCATCTCCAAGTCCAGAAGAAAGATGGAGCTGAGTGATCGATCTTAAACCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR GCA 90 bp | TTTAAGATCGATCACTCAGCTCCATCTTTCTTCTGGACTTGGAGATaGCCGTGTGTCATGGTAAGTAAGTCAGTGCTGGGGAGGGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: FKIDHSAPSFFWTWR*PCVMVSKSVLGRGS Trigger: TGAGCCCCTCCCCAGCACTGACTTACTTACCATGACACACGGGCATCTCCAAGTCCAGAAGAAAGATGGAGCTGAGTGATCGATCTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR CCA 90 bp | ATGACTCGAGGGTTTAAGATCGATCACTCAGCTCCATCTTTCTTCTaGACTTGGAGATGCCCGTGTGTCATGGTAAGTAAGTCAGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: MTRGFKIDHSAPSFF*TWRCPCVMVSKSVL Trigger: CAGCACTGACTTACTTACCATGACACACGGGCATCTCCAAGTCCAGAAGAAAGATGGAGCTGAGTGATCGATCTTAAACCCTCGAGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR CCA 90 bp | TCAGGCTGCAGACATCAACGCCAAATCTCAGATACATTCACAGCTTaGGGATTTAATCTTCACTCTCCTGCAGAAAGTCAGGGTGGGAAT | + |
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Preference number: 1 (lower is better) Translates to: SGCRHQRQISDTFTA*GFNLHSPAESQGGN Trigger: ATTCCCACCCTGACTTTCTGCAGGAGAGTGAAGATTAAATCCCCAAGCTGTGAATGTATCTGAGATTTGGCGTTGATGTCTGCAGCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR CCA 90 bp | TATTTTGTATTTGCTGTTACTGAGCTGGCTTTGAGACAGCAGATGTaGAGAGTGGGTAGCTCTCAGTGCTTGAAGGGCAGAAACAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: YFVFAVTELALRQQM*RVGSSQCLKGRNRL Trigger: AAGCCTGTTTCTGCCCTTCAAGCACTGAGAGCTACCCACTCTCCACATCTGCTGTCTCAAAGCCAGCTCAGTAACAGCAAATACAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR GCA 90 bp | CTGGCCTATGCTCTTTCTTCCGTCTACATGGTTAAGCCAGTCTACTaGATCATACATATAATCCTACATTCAGGACAATTGAGGCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LAYALSSVYMVKPVY*IIHIILHSGQLRQD Trigger: ATCCTGCCTCAATTGTCCTGAATGTAGGATTATATGTATGATGCAGTAGACTGGCTTAACCATGTAGACGGAAGAAAGAGCATAGGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR TCA 90 bp | TTCCTTTCTTCCTTCGAGGTTTTTGTTGTTGTTGTTGTTTGGATTTaGTTTGATTTGATTGATTTGAGACAGGGGCTTGCTGTAGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: FLSSFEVFVVVVVWI*FDLIDLRQGLAVAL Trigger: CAAGGCTACAGCAAGCCCCTGTCTCAAATCAATCAAATCAAATCAAATCCAAACAACAACAACAACAAAAACCTCGAAGGAAGAAAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTTCCCAAGTGTTGGGATTACAAGTGTGTGCTACCAAGGCCTGGCCTATGGCCCTAAGGCTGGGATaGATACCTCAGGCTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: SASQVLGLQVCATKAWPMALRLG*IPQAAD Trigger: GTCTGCAGCCTGAGGTATCCATCCCAGCCTTAGGGC...CATAGGCCAGGCCTTGGTAGCACACACTTGTAATCCCAACACTTGGGAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR GCA 90 bp | GTTACTGAGCTGGCTTTGAGACAGCAGATGTGGAGAGTGGGTAGCTCTCAGTGCCCAAGGCCTGGCCTATaGTCTTTCTTCCGTCTACAT | + |
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Preference number: 2 (lower is better) Translates to: VTELALRQQMWRVGSSQCPRPGL*SFFRLH Trigger: ATGTAGACGGAAGAAAGAGCATAGGCCAGGCCTTGG...GCACTGAGAGCTACCCACTCTCCACATCTGCTGTCTCAAAGCCAGCTCAGTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCAGAAACAGGCTTCCCCACCATACATAGATCATATACACACACACACCGCTGGATTCTCTGAGTaGCACCACCCATCCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: EGQKQASPPYIDHIHTHTAGFSE*HHPSPA Trigger: TGCTGGGGATGGGTGGTGCCACTCAGAGAATCCAGC...GGTGTGTGTGTGTATATGATCTATGTATGGTGGGGAAGCCTGTTTCTGCCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGAGAGTGGGTAGCTCTCAGTGCTTGAAGGGCAGAAACAGGCTTCCCCACCTGCTTCCCAAGTGTTaGGATTACAAGTGTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: MWRVGSSQCLKGRNRLPHLLPKC*DYKCVL Trigger: TAGCACACACTTGTAATCCCAACACTTGGGAAGCAG...GTGGGGAAGCCTGTTTCTGCCCTTCAAGCACTGAGAGCTACCCACTCTCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGCAGAAACAGGCTTCCCCACCATACATAGATCATATACACACACACACCATGGATACCTCAGGCTaGAGACATCAACGCCAAATC | + |
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Preference number: 2 (lower is better) Translates to: EGQKQASPPYIDHIHTHTMDTSG*RHQRQI Trigger: GATTTGGCGTTGATGTCTGCAGCCTGAGGTATCCAT...GGTGTGTGTGTGTATATGATCTATGTATGGTGGGGAAGCCTGTTTCTGCCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR CCA 90 bp | ACCATACATAGATCATATACACACACACACCTTAAGGGCAGGAGCAAGCCTCTGGCTCCATCTTTCTTCTaGACTTGGAGATGCCCGTGT | + |
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Preference number: 2 (lower is better) Translates to: TIHRSYTHTHLKGRSKPLAPSFF*TWRCPC Trigger: ACACGGGCATCTCCAAGTCCAGAAGAAAGATGGAGC...CAGAGGCTTGCTCCTGCCCTTAAGGTGTGTGTGTGTATATGATCTATGTATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR TCA 90 bp | GAAGGGCAGAAACAGGCTTCCCCACCATACATAGATCATATACACACACACACCTACATTCAGGACAATTaGGGCAGGATGATTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: EGQKQASPPYIDHIHTHTYIQDN*GRMIVS Trigger: ACTCACAATCATCCTGCCTCAATTGTCCTGAATGTA...GGTGTGTGTGTGTATATGATCTATGTATGGTGGGGAAGCCTGTTTCTGCCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR GCA 90 bp | ATATACATCATATATATACACCTGACACCTACTCCACTGCTAGGTGTAAACAGATTTGAGACAGGGGCTTaGTGTAGCCTTGTCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: IYIIYIHLTPTPLLGVNRFETGA*CSLVWP Trigger: AGGCCAGACAAGGCTACAGCAAGCCCCTGTCTCAAA...TCTGTTTACACCTAGCAGTGGAGTAGGTGTCAGGTGTATATATATGATGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR GCA 72 bp | CTTGTGGGATCAGGGTTGAGGGTGGTGTTGCAGGCCTaGCCTAAGGCTGGGATGGATACCTCAGGCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LVGSGLRVVLQA*PKAGMDTSGCR Trigger: TCTGCAGCCTGAGGTATCCATCCCAGCCTTAGGGCAGGCCTGCAACACCACCCTCAACCCTGATCCCACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR GCA 72 bp | CGTCCAGCCCTAGATGGGTATCATGGCCAGGATCTCTaGTCCTGGCGGCCTCTTGAGATGACTCGAGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: RPALDGYHGQDL*SWRPLEMTRGF Trigger: AAACCCTCGAGTCATCTCAAGAGGCCGCCAGGAGCAGAGATCCTGGCCATGATACCCATCTAGGGCTGGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR CCA 72 bp | GCCCTAGATGGGTATCATGGCCAGGATCTCTGCTCCTaGCGGCCTCTTGAGATGACTCGAGGGTTTAAGATC | + |
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Preference number: 3 (lower is better) Translates to: ALDGYHGQDLCS*RPLEMTRGFKI Trigger: GATCTTAAACCCTCGAGTCATCTCAAGAGGCCGCCAGGAGCAGAGATCCTGGCCATGATACCCATCTAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR TCA 72 bp | ATGGCCAGGATCTCTGCTCCTGGCGGCCTCTTGAGATaGCTCGAGGGTTTAAGATCGATCACTCAGCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: MARISAPGGLLR*LEGLRSITQLH Trigger: ATGGAGCTGAGTGATCGATCTTAAACCCTCGAGTCATCTCAAGAGGCCGCCAGGAGCAGAGATCCTGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR CAA 90 bp | GAAGGGCAGAAACAGGCTTCCCCACCATACATAGATCATATACACACACACACCCTTGTGGGATCAGGGTaGAGGGTGGTGTTGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: EGQKQASPPYIDHIHTHTLVGSG*RVVLQA Trigger: GGCCTGCAACACCACCCTCAACCCTGATCCCACAAG...GGTGTGTGTGTGTATATGATCTATGTATGGTGGGGAAGCCTGTTTCTGCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR TCA 72 bp | GACAGCAGATGTGGAGAGTGGGTAGCTCTCAGTGCTTaGAGGGCAGAAACAGGCTTCCCCACCATACATAGA | + |
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Preference number: 3 (lower is better) Translates to: DSRCGEWVALSA*RAETGFPTIHR Trigger: TCTATGTATGGTGGGGAAGCCTGTTTCTGCCCTTCAAGCACTGAGAGCTACCCACTCTCCACATCTGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR GCA 72 bp | CAGGCCTGCCCTAAGGCTGGGATGGATACCTCAGGCTaGAGACATCAACGCCAAATCTCAGATACATTCACA | + |
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Preference number: 3 (lower is better) Translates to: QACPKAGMDTSG*RHQRQISDTFT Trigger: TGTGAATGTATCTGAGATTTGGCGTTGATGTCTGCAGCCTGAGGTATCCATCCCAGCCTTAGGGCAGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR TCA 72 bp | GTCACATCAAACCCTTCAGGATGTTCAGTGCCAGCATaGACCATGGACCAAGGACAGGGTCTGACTCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: VTSNPSGCSVPA*TMDQGQGLTLS Trigger: GCTAAGAGTCAGACCCTGTCCTTGGTCCATGGTTCATGCTGGCACTGAACATCCTGAAGGGTTTGATGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR TCA 72 bp | TTTGAGACAGGGGCTTGCTGTAGCCTTGTCTGGCCTTaGGCTCGGAGATGTTTGATTCTGCTTCCCAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: FETGACCSLVWP*ARRCLILLPKC Trigger: ACACTTGGGAAGCAGAATCAAACATCTCCGAGCTCAAGGCCAGACAAGGCTACAGCAAGCCCCTGTCTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR GCA 72 bp | GATCACTCAGCTCCATCTTTCTTCTGGACTTGGAGATaGCCGTGTGTCATGGTAAGTAAGTCAGTGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: DHSAPSFFWTWR*PCVMVSKSVLG Trigger: CCCCAGCACTGACTTACTTACCATGACACACGGGCATCTCCAAGTCCAGAAGAAAGATGGAGCTGAGTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR CAA 90 bp | GTTACTGAGCTGGCTTTGAGACAGCAGATGTGGAGAGTGGGTAGCTCTCAGTGCCTACATTCAGGACAATaGAGGCAGGATGATTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: VTELALRQQMWRVGSSQCLHSGQ*RQDDCE Trigger: CTCACAATCATCCTGCCTCAATTGTCCTGAATGTAG...GCACTGAGAGCTACCCACTCTCCACATCTGCTGTCTCAAAGCCAGCTCAGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR CAA 90 bp | ATGTGGAGAGTGGGTAGCTCTCAGTGCTTGAAGGGCAGAAACAGGCTTCCCCACGGCCAACCTAAGACCTaGTTTCAGAAAAACAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: MWRVGSSQCLKGRNRLPHGQPKT*FQKNKR Trigger: TCTTTTGTTTTTCTGAAACAAGGTCTTAGGTTGGCC...GTGGGGAAGCCTGTTTCTGCCCTTCAAGCACTGAGAGCTACCCACTCTCCACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR CCA 72 bp | CAAGTGTTGGGATTACAAGTGTGTGCTACCAAGGCCTaGCCTATGCTCTTTCTTCCGTCTACATGGTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: QVLGLQVCATKA*PMLFLPSTWLS Trigger: GCTTAACCATGTAGACGGAAGAAAGAGCATAGGCCAGGCCTTGGTAGCACACACTTGTAATCCCAACACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR CCA 72 bp | AAGATCGATCACTCAGCTCCATCTTTCTTCTGGACTTaGAGATGCCCGTGTGTCATGGTAAGTAAGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: KIDHSAPSFFWT*RCPCVMVSKSV Trigger: CACTGACTTACTTACCATGACACACGGGCATCTCCAAGTCCAGAAGAAAGATGGAGCTGAGTGATCGATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR CCA 72 bp | GGGTTTAAGATCGATCACTCAGCTCCATCTTTCTTCTaGACTTGGAGATGCCCGTGTGTCATGGTAAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: GFKIDHSAPSFF*TWRCPCVMVSK Trigger: CTTACTTACCATGACACACGGGCATCTCCAAGTCCAGAAGAAAGATGGAGCTGAGTGATCGATCTTAAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR TCA 72 bp | ATGGCTATTTTGTATTTGCTGTTACTGAGCTGGCTTTaGGACAGCAGATGTGGAGAGTGGGTAGCTCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: MAILYLLLLSWL*DSRCGEWVALS Trigger: ACTGAGAGCTACCCACTCTCCACATCTGCTGTCTCAAAGCCAGCTCAGTAACAGCAAATACAAAATAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR-3UTR CAA 90 bp | GAAGGGCAGAAACAGGCTTCCCCACCATACATAGATCATATACACACACACACCTTTGATTTGATTGATTaGAGACAGGGGCTTGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: EGQKQASPPYIDHIHTHTFDLID*RQGLAV Trigger: TACAGCAAGCCCCTGTCTCAAATCAATCAAATCAAA...GGTGTGTGTGTGTATATGATCTATGTATGGTGGGGAAGCCTGTTTCTGCCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR CAA 72 bp | ACCATGGACCAAGGACAGGGTCTGACTCTTAGCGCTTaGGTAGCATCTTGTGGGATCAGGGTTGAGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: TMDQGQGLTLSA*VASCGIRVEGG Trigger: ACCACCCTCAACCCTGATCCCACAAGATGCTACCAAAGCGCTAAGAGTCAGACCCTGTCCTTGGTCCATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| CDS-3UTR TCA 90 bp | GACACCTACTCCACTGCTAGGTGTAAACAGAAGGGGCTCAATAGATGCTCACAGAGAAGCTGGTTCCCTTaGGCTTGTGCCGTTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DTYSTARCKQKGLNRCSQRSWFP*ACAVGR Trigger: TCTTCCAACGGCACAAGCTCAAGGGAACCAGCTTCT...CTGTGAGCATCTATTGAGCCCCTTCTGTTTACACCTAGCAGTGGAGTAGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| CDS-3UTR GCA 90 bp | ATACCTCAGGCTGCAGACATCAACGCCAAATCTCAGATACATTCACAGCTTGGGGTTCCCTTGAGCTTGTaGCGTTGGAAGAAGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: IPQAADINAKSQIHSQLGVPLSL*RWKKKA Trigger: TGCCTTCTTCTTCCAACGGCACAAGCTCAAGGGAAC...CCCAAGCTGTGAATGTATCTGAGATTTGGCGTTGATGTCTGCAGCCTGAGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| CDS-3UTR TCA 90 bp | ACCATACATAGATCATATACACACACACACCTTAAGGGCAGGAGCAAGCCTCTGGAATCCCAAAGAGGATaGAGAAGACGCCAAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TIHRSYTHTHLKGRSKPLESQRG*RRRQSQ Trigger: CTGGCTTTGGCGTCTTCTTCATCCTCTTTGGGATTC...CAGAGGCTTGCTCCTGCCCTTAAGGTGTGTGTGTGTATATGATCTATGTATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| 3UTR CAA 72 bp | AATGGCTATTTTGTATTTGCTGTTACTGAGCTGGCTTaGAGACAGCAGATGTGGAGAGTGGGTAGCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: NGYFVFAVTELA*RQQMWRVGSSQ Trigger: CTGAGAGCTACCCACTCTCCACATCTGCTGTCTCAAAGCCAGCTCAGTAACAGCAAATACAAAATAGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| CDS-3UTR CAA 90 bp | ATGTGGAGAGTGGGTAGCTCTCAGTGCTTGAAGGGCAGAAACAGGCTTCCCCACCTGGTTCCCTTGAGCTaGTGCCGTTGGAAGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: MWRVGSSQCLKGRNRLPHLVPLS*CRWKKK Trigger: CTTCTTCTTCCAACGGCACAAGCTCAAGGGAACCAG...GTGGGGAAGCCTGTTTCTGCCCTTCAAGCACTGAGAGCTACCCACTCTCCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| CDS-3UTR CAA 90 bp | TCTGCTTCCCAAGTGTTGGGATTACAAGTGTGTGCTACCAAGGCCTGGCCTATGACAGGGAAAAAGCCCTaGAAGAGGCTAATGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SASQVLGLQVCATKAWPMTGKKP*KRLMKP Trigger: TGGCTTCATTAGCCTCTTCAAGGGCTTTTTCCCTGT...CATAGGCCAGGCCTTGGTAGCACACACTTGTAATCCCAACACTTGGGAAGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| CDS-3UTR CAA 90 bp | ACCTTAAGGGCGGGAACAGGCCTCCCTATCATATATACATCATATATATACACCAAGAAGCTGGTTCCCTaGAGCTTGTGCCGTTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TLRAGTGLPIIYTSYIYTKKLVP*SLCRWK Trigger: CTTCCAACGGCACAAGCTCAAGGGAACCAGCTTCTT...GGTGTATATATATGATGTATATATGATAGGGAGGCCTGTTCCCGCCCTTAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| CDS CCA 72 bp | CCCAGGAAGAAGCTGGTTCCCTTGAGCTTGTGCCGTTaGAAGAAGAAGGCAAACGTTCTCCTCAGGCCGATG | + |
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Preference number: 6 (lower is better) Translates to: PRKKLVPLSLCR*KKKANVLLRPM Trigger: CATCGGCCTGAGGAGAACGTTTGCCTTCTTCTTCCAACGGCACAAGCTCAAGGGAACCAGCTTCTTCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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| CDS CAA 72 bp | CCCCAGGAAGAAGCTGGTTCCCTTGAGCTTGTGCCGTaGGAAGAAGAAGGCAAACGTTCTCCTCAGGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: PQEEAGSLELVP*EEEGKRSPQAD Trigger: ATCGGCCTGAGGAGAACGTTTGCCTTCTTCTTCCAACGGCACAAGCTCAAGGGAACCAGCTTCTTCCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094557.7 |
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