Pregenerated sensors for GOLPH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022200Ensembl transcript IDs: ENSMUST00000059680.7, ENSMUST00000226517.2, ENSMUST00000228671.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGAGAGTGGCAACAGGGGGTAGGGTGCCAATATGGCGAGAAGGTTaGTTACAAACAGAAAGAGGAAGGCCTCTCGTACCAGCAGAATCC | + |
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Preference number: 1 (lower is better) Translates to: VRVATGGRVPIWREG*LQTERGRPLVPAES Trigger: GGATTCTGCTGGTACGAGAGGCCTTCCTCTTTCTGTTTGTAACCAACCTTCTCGCCATATTGGCACCCTACCCCCTGTTGCCACTCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR TCA 90 bp | AAGCACATGTGGGAGACTCAAGCTGAGGTAATAGAACGCTGTGCATaGGGTGGGGGCTGGAGGTACTCTGAAGGTCACAGTACACCAGAA | + |
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Preference number: 1 (lower is better) Translates to: KHMWETQAEVIERCA*GGGWRYSEGHSTPE Trigger: TTCTGGTGTACTGTGACCTTCAGAGTACCTCCAGCCCCCACCTCATGCACAGCGTTCTATTACCTCAGCTTGAGTCTCCCACATGTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR GCA 90 bp | GTGTTGGCCTTCAGACACTCCACTTCTGGGTCTAAGTCAAGGAGCTaGCGTACTCTCTTGGTGGCTAGATCATACTGCTCGTCCAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: VLAFRHSTSGSKSRS*RTLLVARSYCSSRR Trigger: TCTTCTGGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGACCCAGAAGTGGAGTGTCTGAAGGCCAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR CCA 90 bp | GACACTCCACTTCTGGGTCTAAGTCAAGGAGCTGCCGTACTCTCTTaGTGGCTAGATCATACTGCTCGTCCAGAAGAGGAGCAAACGCAT | + |
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Preference number: 1 (lower is better) Translates to: DTPLLGLSQGAAVLS*WLDHTARPEEEQTH Trigger: ATGCGTTTGCTCCTCTTCTGGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGACCCAGAAGTGGAGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR CCA 90 bp | AAAACAGGAACAGTGAGAGTGGCAACAGGGGGTAGGGTGCCAATATaGCGAGAAGGTTGGTTACAAACAGAAAGAGGAAGGCCTCTCGTA | + |
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Preference number: 1 (lower is better) Translates to: KTGTVRVATGGRVPI*REGWLQTERGRPLV Trigger: TACGAGAGGCCTTCCTCTTTCTGTTTGTAACCAACCTTCTCGCCATATTGGCACCCTACCCCCTGTTGCCACTCTCACTGTTCCTGTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR CCA 90 bp | ACTCCACTTCTGGGTCTAAGTCAAGGAGCTGCCGTACTCTCTTGGTaGCTAGATCATACTGCTCGTCCAGAAGAGGAGCAAACGCATTTT | + |
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Preference number: 1 (lower is better) Translates to: TPLLGLSQGAAVLSW*LDHTARPEEEQTHF Trigger: AAAATGCGTTTGCTCCTCTTCTGGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGACCCAGAAGTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR GCA 90 bp | TCTAAGTCAAGGAGCTGCCGTACTCTCTTGGTGGCTAGATCATACTaGTCGTCCAGAAGAGGAGCAAACGCATTTTCCAAAACATCCGAG | + |
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Preference number: 1 (lower is better) Translates to: SKSRSCRTLLVARSY*SSRRGANAFSKTSE Trigger: CTCGGATGTTTTGGAAAATGCGTTTGCTCCTCTTCTGGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR TCA 90 bp | TGTATAAAACGTCCTAATAGATACAGATGTTTGCCTTTGGTGAGTTaGAGGCCTGGCTGTGACTTGTCTGAACTGCAGGCAGAAGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: CIKRPNRYRCLPLVS*RPGCDLSELQAEGQ Trigger: CTGGCCTTCTGCCTGCAGTTCAGACAAGTCACAGCCAGGCCTTCAACTCACCAAAGGCAAACATCTGTATCTATTAGGACGTTTTATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR GCA 90 bp | TGGTTACAAACAGAAAGAGGAAGGCCTCTCGTACCAGCAGAATCCTaGGTACATACAAAAAGAAATATCCACCCACCATTTTGTAGAACA | + |
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Preference number: 1 (lower is better) Translates to: WLQTERGRPLVPAES*VHTKRNIHPPFCRT Trigger: TGTTCTACAAAATGGTGGGTGGATATTTCTTTTTGTATGTACGCAGGATTCTGCTGGTACGAGAGGCCTTCCTCTTTCTGTTTGTAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR GCA 90 bp | ACCCATTTGTCAAGAACAGCTTCTTGTACCTTCTTGATGAGACGCTaGTTAATGTTGTTATTGGTGAGAGGATGTGTCGTCATGTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: THLSRTASCTFLMRR*LMLLLVRGCVVMSN Trigger: GTTTGACATGACGACACATCCTCTCACCAATAACAACATTAAGCAGCGTCTCATCAAGAAGGTACAAGAAGCTGTTCTTGACAAATGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR TCA 90 bp | CGCCTTTTATTTGTATCGTCAGTGACAGCTTTCATTCAGCAGAATTaGGTTTCTGCAACAAACACCATATGTGGCATGCCAAGTTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: RLLFVSSVTAFIQQN*VSATNTICGMPSLK Trigger: CTTTAAACTTGGCATGCCACATATGGTGTTTGTTGCAGAAACTCAATTCTGCTGAATGAAAGCTGTCACTGACGATACAAATAAAAGGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | CGCAGCTACCACAGCCCAGAGAACTTCGTTGGTGTTGGCCTTCAGACACTCCACATAGAACGCTGTGCATaGGGTGGGGGCTGGAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: RSYHSPENFVGVGLQTLHIERCA*GGGWRY Trigger: GTACCTCCAGCCCCCACCTCATGCACAGCGTTCTAT...GTGGAGTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGCTGTGGTAGCTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAACGCAGCTACCACAGCCCAGAGAACTTCGTTGGTGTTGGCCTTCAGACACGGGCTGGAGGTACTCTaGAGGTCACAGTACACCAGA | + |
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Preference number: 2 (lower is better) Translates to: VNAATTAQRTSLVLAFRHGLEVL*RSQYTR Trigger: TCTGGTGTACTGTGACCTTCAGAGTACCTCCAGCCC...GTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGCTGTGGTAGCTGCGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTGACTTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGGGTAATAGAACGCTGTaGATGAGGTGGGGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GCDLSELQAEGQVNKHMWGNRTL*MRWGLE Trigger: CTCCAGCCCCCACCTCATGCACAGCGTTCTATTACC...CCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAAGTCACAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTGACTTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGTTGCCTTTGGTGAGTTaGAGGCCTGGCTGTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: GCDLSELQAEGQVNKHMWLPLVS*RPGCDL Trigger: CAAGTCACAGCCAGGCCTTCAACTCACCAAAGGCAA...CCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAAGTCACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCGTTGGTGTTGGCCTTCAGACACTCCACTTCTGGGTCTAAGTCAAGGAGCTCATGGGCTAGGTAAATaGGGGCCAGCAAGCGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LRWCWPSDTPLLGLSQGAHGLGK*GPASAC Trigger: ACAAGCGCTTGCTGGCCCTCATTTACCTAGCCCATG...AGCTCCTTGACTTAGACCCAGAAGTGGAGTGTCTGAAGGCCAACACCAACGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR CAA 90 bp | AGACACTCCACTTCTGGGTCTAAGTCAAGGAGCTGCCGTACTCTCTaGGTGGCTAGATCATACTGCTCGTCCAGAAGAGGAGCAAACGCA | + |
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Preference number: 2 (lower is better) Translates to: RHSTSGSKSRSCRTL*VARSYCSSRRGANA Trigger: TGCGTTTGCTCCTCTTCTGGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGACCCAGAAGTGGAGTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR CAA 90 bp | TACTTGGTAAACGCAGCTACCACAGCCCAGAGAACTTCGTTGGTGTaGGCCTTCAGACACTCCACTTCTGGGTCTAAGTCAAGGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: YLVNAATTAQRTSLV*AFRHSTSGSKSRSC Trigger: GCAGCTCCTTGACTTAGACCCAGAAGTGGAGTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGCTGTGGTAGCTGCGTTTACCAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGGTTACAAACAGAAAGAGGAAGGCCTCTCGTACCAGCAGAATCCTGCGTACGGGCTGGAGGTACTCTaGAGGTCACAGTACACCAGA | + |
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Preference number: 2 (lower is better) Translates to: VGYKQKEEGLSYQQNPAYGLEVL*RSQYTR Trigger: TCTGGTGTACTGTGACCTTCAGAGTACCTCCAGCCC...GTACGCAGGATTCTGCTGGTACGAGAGGCCTTCCTCTTTCTGTTTGTAACCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTGACTTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGGCTGCCGTACTCTCTTaGTGGCTAGATCATACTGCT | + |
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Preference number: 2 (lower is better) Translates to: GCDLSELQAEGQVNKHMWAAVLS*WLDHTA Trigger: AGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGC...CCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAAGTCACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR CAA 90 bp | GACAGTTACTTGGTAAACGCAGCTACCACAGCCCAGAGAACTTCGTaGGTGTTGGCCTTCAGACACTCCACTTCTGGGTCTAAGTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: DSYLVNAATTAQRTS*VLAFRHSTSGSKSR Trigger: CCTTGACTTAGACCCAGAAGTGGAGTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGCTGTGGTAGCTGCGTTTACCAAGTAACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTGACTTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGGAACTTCGTTGGTGTTaGCCTTCAGACACTCCACTT | + |
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Preference number: 2 (lower is better) Translates to: GCDLSELQAEGQVNKHMWELRWC*PSDTPL Trigger: AAGTGGAGTGTCTGAAGGCCAACACCAACGAAGTTC...CCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAAGTCACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCCTGAAAGGGTCACACATCTCTCTCCTTCAATAATGAGAGCTCTATTTTGCATAGAACGCTGTGCATaGGGTGGGGGCTGGAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: SPERVTHLSPSIMRALFCIERCA*GGGWRY Trigger: GTACCTCCAGCCCCCACCTCATGCACAGCGTTCTAT...GCAAAATAGAGCTCTCATTATTGAAGGAGAGAGATGTGTGACCCTTTCAGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCATACTGCTCGTCCAGAAGAGGAGCAAACGCATTTTCCAAAACATCCGAGCATGGGCTAGGTAAATaGGGGCCAGCAAGCGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: RSYCSSRRGANAFSKTSEHGLGK*GPASAC Trigger: ACAAGCGCTTGCTGGCCCTCATTTACCTAGCCCATG...CTCGGATGTTTTGGAAAATGCGTTTGCTCCTCTTCTGGACGAGCAGTATGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCCTGAAAGGGTCACACATCTCTCTCCTTCAATAATGAGAGCTCTATTTTGCGTGGGAGACTCAAGCTaGGGTAATAGAACGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SPERVTHLSPSIMRALFCVGDSS*GNRTLC Trigger: GCACAGCGTTCTATTACCTCAGCTTGAGTCTCCCAC...GCAAAATAGAGCTCTCATTATTGAAGGAGAGAGATGTGTGACCCTTTCAGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTGACTTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGATATGGCGAGAAGGTTaGTTACAAACAGAAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: GCDLSELQAEGQVNKHMWIWREG*LQTERG Trigger: TCCTCTTTCTGTTTGTAACCAACCTTCTCGCCATAT...CCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAAGTCACAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTGACTTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGTGGGAAAGTACAAACTaGAGAAAACCAGAGTCAATA | + |
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Preference number: 2 (lower is better) Translates to: GCDLSELQAEGQVNKHMWWESTN*RKPESI Trigger: TATTGACTCTGGTTTTCTGCAGTTTGTACTTTCCCA...CCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAAGTCACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGAGCCCTGAAAGGGTCACACATCTCTCTCCTTCAATAATGAGAGCTCTACAACAGGGGGTAGGGTaGCAATATGGCGAGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: IKSPERVTHLSPSIMRALQQGVG*QYGEKV Trigger: AACCTTCTCGCCATATTGGCACCCTACCCCCTGTTG...TAGAGCTCTCATTATTGAAGGAGAGAGATGTGTGACCCTTTCAGGGCTCTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGAGAACTTCGTTGGTGTTGGCCTTCAGACACTCCACTTCTGGGTCTAAGTTCTTGATGAGACGCTaGTTAATGTTGTTATTGGTG | + |
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Preference number: 2 (lower is better) Translates to: AQRTSLVLAFRHSTSGSKFLMRR*LMLLLV Trigger: CACCAATAACAACATTAAGCAGCGTCTCATCAAGAA...CTTAGACCCAGAAGTGGAGTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTGAAAGGGTCACACATCTCTCTCCTTCAATAATGAGAGCTCTATTTTGCGTGGCTAGATCATACTaGTCGTCCAGAAGAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: SPERVTHLSPSIMRALFCVARSY*SSRRGA Trigger: TGCTCCTCTTCTGGACGAGCAGTATGATCTAGCCAC...GCAAAATAGAGCTCTCATTATTGAAGGAGAGAGATGTGTGACCCTTTCAGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTGAAAGGGTCACACATCTCTCTCCTTCAATAATGAGAGCTCTATTTTGCTCTAAGTCAAGGAGCTaGCGTACTCTCTTGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SPERVTHLSPSIMRALFCSKSRS*RTLLVA Trigger: AGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGA...GCAAAATAGAGCTCTCATTATTGAAGGAGAGAGATGTGTGACCCTTTCAGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTCAAGGAGCTGCCGTACTCTCTTGGTGGCTAGATCATACTGCTCGTCCAATATGGCGAGAAGGTTaGTTACAAACAGAAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LSQGAAVLSWWLDHTARPIWREG*LQTERG Trigger: TCCTCTTTCTGTTTGTAACCAACCTTCTCGCCATAT...TGGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGAGCCCTGAAAGGGTCACACATCTCTCTCCTTCAATAATGAGAGCTCTATCTAAGTCAAGGAGCTaGCGTACTCTCTTGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: IKSPERVTHLSPSIMRALSKSRS*RTLLVA Trigger: AGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGA...TAGAGCTCTCATTATTGAAGGAGAGAGATGTGTGACCCTTTCAGGGCTCTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAGCTCTATTTTGCCATCAGATAACAATGAATGAAGCAAGTGAGGGGCACAAAATGAGGCAGAGGTaGCCAGAAGAAGGGGCGATT | + |
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Preference number: 2 (lower is better) Translates to: MRALFCHQITMNEASEGHKMRQR*PEEGAI Trigger: AATCGCCCCTTCTTCTGGCCACCTCTGCCTCATTTT...GTGCCCCTCACTTGCTTCATTCATTGTTATCTGATGGCAAAATAGAGCTCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR GCA 90 bp | TTAATTTCCCTATACATCATTATAAAGGGAAGGGCAAACCCATTTGGTGGCAAAGGTAATAGAACGCTGTaGATGAGGTGGGGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LISLYIIIKGRANPFGGKGNRTL*MRWGLE Trigger: CTCCAGCCCCCACCTCATGCACAGCGTTCTATTACC...TTTGCCACCAAATGGGTTTGCCCTTCCCTTTATAATGATGTATAGGGAAATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | TTAATTTCCCTATACATCATTATAAAGGGAAGGGCAAACCCATTTGGTGGCAAAGTGGGAGACTCAAGCTaGGGTAATAGAACGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LISLYIIIKGRANPFGGKVGDSS*GNRTLC Trigger: GCACAGCGTTCTATTACCTCAGCTTGAGTCTCCCAC...TTTGCCACCAAATGGGTTTGCCCTTCCCTTTATAATGATGTATAGGGAAATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | AACAAAAGCCAATTATTAGTGTGGGAAAGTACAAACTGCAGAAAACCAGAGTCAAGGCAGAAGGCCAGGTaGATAAGCACATGTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: NKSQLLVWESTNCRKPESRQKAR*ISTCGR Trigger: TCTCCCACATGTGCTTATTCACCTGGCCTTCTGCCT...TGACTCTGGTTTTCTGCAGTTTGTACTTTCCCACACTAATAATTGGCTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTGTACTCAAGATTAGTACTGGTCACAAGCCTCTTTCCTACACAAATCATAAGGCAGAAGGCCAGGTaGATAAGCACATGTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: KLYSRLVLVTSLFPTQIIRQKAR*ISTCGR Trigger: TCTCCCACATGTGCTTATTCACCTGGCCTTCTGCCT...TATGATTTGTGTAGGAAAGAGGCTTGTGACCAGTACTAATCTTGAGTACAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGAATTGAGTTTCTGCAACAAACACCATATGTGGCATGCCAAGTTTAAAGTACGCTTGTCCATTCGGTaGGGGTCATTTACCCATTTG | + |
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Preference number: 2 (lower is better) Translates to: AELSFCNKHHMWHAKFKVRLSIR*GSFTHL Trigger: CAAATGGGTAAATGACCCTCACCGAATGGACAAGCG...TACTTTAAACTTGGCATGCCACATATGGTGTTTGTTGCAGAAACTCAATTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGTGGCTAGATCATACTGCTCGTCCAGAAGAGGAGCAAACGCATTTTCCATGGGAAAGTACAAACTaGAGAAAACCAGAGTCAATA | + |
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Preference number: 2 (lower is better) Translates to: SWWLDHTARPEEEQTHFPWESTN*RKPESI Trigger: TATTGACTCTGGTTTTCTGCAGTTTGTACTTTCCCA...TGGAAAATGCGTTTGCTCCTCTTCTGGACGAGCAGTATGATCTAGCCACCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGTGGCAAACACGCTGCCTGCTTCTCTAGTGTTCTGCCGCCTTTTATTTGTATGGGAAAGTACAAACTaGAGAAAACCAGAGTCAATA | + |
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Preference number: 2 (lower is better) Translates to: LVANTLPASLVFCRLLFVWESTN*RKPESI Trigger: TATTGACTCTGGTTTTCTGCAGTTTGTACTTTCCCA...TACAAATAAAAGGCGGCAGAACACTAGAGAAGCAGGCAGCGTGTTTGCCACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGAATCCTGCGTACATACAAAAAGAAATATCCACCCACCATTTTGTAGAACAGCCGTACTCTCTTGGTaGCTAGATCATACTGCTCGT | + |
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Preference number: 2 (lower is better) Translates to: AESCVHTKRNIHPPFCRTAVLSW*LDHTAR Trigger: ACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGC...TGTTCTACAAAATGGTGGGTGGATATTTCTTTTTGTATGTACGCAGGATTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTAGAACAAAAGCCAATTATTAGTGTGGGAAAGTACAAACTGCAGAAAACCCCAAAACAGGAACAGTaGGAGTGGCAACAGGGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: FVEQKPIISVGKYKLQKTPKQEQ*EWQQGV Trigger: TACCCCCTGTTGCCACTCTCACTGTTCCTGTTTTGG...GGTTTTCTGCAGTTTGTACTTTCCCACACTAATAATTGGCTTTTGTTCTACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGTAGAACAAAAGCCAATTATTAGTGTGGGAAAGTACAAACTGCAGAAAACCTTGCCTTTGGTGAGTTaGAGGCCTGGCTGTGACTTG | + |
|
Preference number: 2 (lower is better) Translates to: FVEQKPIISVGKYKLQKTLPLVS*RPGCDL Trigger: CAAGTCACAGCCAGGCCTTCAACTCACCAAAGGCAA...GGTTTTCTGCAGTTTGTACTTTCCCACACTAATAATTGGCTTTTGTTCTACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAACAACTGTAATCACACAACAGATTTACAAAGGAAGCAAAAATTCAAGGGGCCAACAGGGGGTAGGGTaGCAATATGGCGAGAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ITTVITQQIYKGSKNSRGQQGVG*QYGEKV Trigger: AACCTTCTCGCCATATTGGCACCCTACCCCCTGTTG...GCCCCTTGAATTTTTGCTTCCTTTGTAAATCTGTTGTGTGATTACAGTTGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCCTCTCGTACCAGCAGAATCCTGCGTACATACAAAAAGAAATATCCACCCAGCCAATTATTAGTGTaGGAAAGTACAAACTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KASRTSRILRTYKKKYPPSQLLV*ESTNCR Trigger: TCTGCAGTTTGTACTTTCCCACACTAATAATTGGCT...GGGTGGATATTTCTTTTTGTATGTACGCAGGATTCTGCTGGTACGAGAGGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR CCA 90 bp | AGATCATACTGCTCGTCCAGAAGAGGAGCAAACGCATTTTCCAAAACATCCGAGAGCCAATTATTAGTGTaGGAAAGTACAAACTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RSYCSSRRGANAFSKTSESQLLV*ESTNCR Trigger: TCTGCAGTTTGTACTTTCCCACACTAATAATTGGCT...CTCGGATGTTTTGGAAAATGCGTTTGCTCCTCTTCTGGACGAGCAGTATGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTTGCTACCAATTTACATGCAACATCTGCTAGGACTGATATCTGATTTTCTTACAGCATTAGTGGAATaGAGCCCATCCCAAACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: YLLPIYMQHLLGLISDFLTALVE*SPSQTG Trigger: GCCAGTTTGGGATGGGCTGCATTCCACTAATGCTGT...AAGAAAATCAGATATCAGTCCTAGCAGATGTTGCATGTAAATTGGTAGCAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR CAA 90 bp | CCGCCTTTTATTTGTATCGTCAGTGACAGCTTTCATTCAGCAGAATaGAGTTTCTGCAACAAACACCATATGTGGCATGCCAAGTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: PPFICIVSDSFHSAE*SFCNKHHMWHAKFK Trigger: TTTAAACTTGGCATGCCACATATGGTGTTTGTTGCAGAAACTCAATTCTGCTGAATGAAAGCTGTCACTGACGATACAAATAAAAGGCGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
||
| 3UTR CAA 90 bp | TTAAAGTATTTCCTATCTGGTTCTTTTAAGACAGTTTCCCAAGCCTaGCAGCTGAAATGTTACCGTGCCATACTAAATAACCTTCACCTA | + |
|
Preference number: 2 (lower is better) Translates to: LKYFLSGSFKTVSQA*QLKCYRAILNNLHL Trigger: TAGGTGAAGGTTATTTAGTATGGCACGGTAACATTTCAGCTGCAAGGCTTGGGAAACTGTCTTAAAAGAACCAGATAGGAAATACTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGAACAGCTTCTTGTACCTTCTTGATGAGACGCTGCTTAATGTTGTTATTGAGCCAATTATTAGTGTaGGAAAGTACAAACTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SRTASCTFLMRRCLMLLLSQLLV*ESTNCR Trigger: TCTGCAGTTTGTACTTTCCCACACTAATAATTGGCT...CAATAACAACATTAAGCAGCGTCTCATCAAGAAGGTACAAGAAGCTGTTCTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR CAA 90 bp | CTTTCTGTTACAAAATTCTTAATCGTCTTGAGTTGTAGTCGTTACTaGCTACCAATTTACATGCAACATCTGCTAGGACTGATATCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSVTKFLIVLSCSRY*LPIYMQHLLGLISD Trigger: ATCAGATATCAGTCCTAGCAGATGTTGCATGTAAATTGGTAGCAAGTAACGACTACAACTCAAGACGATTAAGAATTTTGTAACAGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAACGCAGCTACCACAGCCCAGAGAACTTCGTTGGTGTTGGCCTTCAGACAGCCCAGAGAACTTCGTaGGTGTTGGCCTTCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: GKRSYHSPENFVGVGLQTAQRTS*VLAFRH Trigger: GTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGC...TGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGCTGTGGTAGCTGCGTTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR TCA 72 bp | TGGGAGACTCAAGCTGAGGTAATAGAACGCTGTGCATaGGGTGGGGGCTGGAGGTACTCTGAAGGTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: WETQAEVIERCA*GGGWRYSEGHS Trigger: ACTGTGACCTTCAGAGTACCTCCAGCCCCCACCTCATGCACAGCGTTCTATTACCTCAGCTTGAGTCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR TCA 72 bp | AGAACGCTGTGCATGAGGTGGGGGCTGGAGGTACTCTaGAGGTCACAGTACACCAGAAACCCAAAACAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RTLCMRWGLEVL*RSQYTRNPKQE Trigger: TTCCTGTTTTGGGTTTCTGGTGTACTGTGACCTTCAGAGTACCTCCAGCCCCCACCTCATGCACAGCGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR CCA 72 bp | GCAACAGGGGGTAGGGTGCCAATATGGCGAGAAGGTTaGTTACAAACAGAAAGAGGAAGGCCTCTCGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: ATGGRVPIWREG*LQTERGRPLVP Trigger: TGGTACGAGAGGCCTTCCTCTTTCTGTTTGTAACCAACCTTCTCGCCATATTGGCACCCTACCCCCTGTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR CCA 72 bp | CTGGGTCTAAGTCAAGGAGCTGCCGTACTCTCTTGGTaGCTAGATCATACTGCTCGTCCAGAAGAGGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LGLSQGAAVLSW*LDHTARPEEEQ Trigger: TTGCTCCTCTTCTGGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR CCA 72 bp | CTTCTGGGTCTAAGTCAAGGAGCTGCCGTACTCTCTTaGTGGCTAGATCATACTGCTCGTCCAGAAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLGLSQGAAVLS*WLDHTARPEEE Trigger: CTCCTCTTCTGGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGACCCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR CCA 72 bp | ACGCAGCTACCACAGCCCAGAGAACTTCGTTGGTGTTaGCCTTCAGACACTCCACTTCTGGGTCTAAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TQLPQPRELRWC*PSDTPLLGLSQ Trigger: TTGACTTAGACCCAGAAGTGGAGTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGCTGTGGTAGCTGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR GCA 72 bp | TTCAGACACTCCACTTCTGGGTCTAAGTCAAGGAGCTaGCGTACTCTCTTGGTGGCTAGATCATACTGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: FRHSTSGSKSRS*RTLLVARSYCS Trigger: CGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGACCCAGAAGTGGAGTGTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR CCA 72 bp | ACAGTGAGAGTGGCAACAGGGGGTAGGGTGCCAATATaGCGAGAAGGTTGGTTACAAACAGAAAGAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TVRVATGGRVPI*REGWLQTERGR Trigger: CCTTCCTCTTTCTGTTTGTAACCAACCTTCTCGCCATATTGGCACCCTACCCCCTGTTGCCACTCTCACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR CCA 72 bp | GAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTaGGAGACTCAAGCTGAGGTAATAGAACGCTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ELQAEGQVNKHM*ETQAEVIERCA Trigger: TGCACAGCGTTCTATTACCTCAGCTTGAGTCTCCCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGGCAAACACGCTGCCTGCTTCTCTAGTGTTCTGCCGCCTTTTATTTGTAAGCTGCCGTACTCTCTaGGTGGCTAGATCATACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LVANTLPASLVFCRLLFVSCRTL*VARSYC Trigger: GCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCT...TACAAATAAAAGGCGGCAGAACACTAGAGAAGCAGGCAGCGTGTTTGCCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
||
| 3UTR GCA 72 bp | GGAAGGGCAAACCCATTTGGTGGCAAACACGCTGCCTaGTTCTCTAGTGTTCTGCCGCCTTTTATTTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: GRANPFGGKHAA*FSSVLPPFICI Trigger: GATACAAATAAAAGGCGGCAGAACACTAGAGAAGCAGGCAGCGTGTTTGCCACCAAATGGGTTTGCCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAGTCAAGGAGCTGCCGTACTCTCTTGGTGGCTAGATCATACTGCTCGTCCGCTTCTTGTACCTTCTaGATGAGACGCTGCTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: SKSRSCRTLLVARSYCSSASCTF*MRRCLM Trigger: CATTAAGCAGCGTCTCATCAAGAAGGTACAAGAAGC...GGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR TCA 72 bp | CGTCCTAATAGATACAGATGTTTGCCTTTGGTGAGTTaGAGGCCTGGCTGTGACTTGTCTGAACTGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RPNRYRCLPLVS*RPGCDLSELQA Trigger: TGCCTGCAGTTCAGACAAGTCACAGCCAGGCCTTCAACTCACCAAAGGCAAACATCTGTATCTATTAGGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCGTTGGTGTTGGCCTTCAGACACTCCACTTCTGGGTCTAAGTCAAGGAGCTAGACGCTGCTTAATGTaGTTATTGGTGAGAGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: LRWCWPSDTPLLGLSQGARRCLM*LLVRGC Trigger: ACATCCTCTCACCAATAACAACATTAAGCAGCGTCT...AGCTCCTTGACTTAGACCCAGAAGTGGAGTGTCTGAAGGCCAACACCAACGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCCATTTGGTGGCAAACACGCTGCCTGCTTCTCTAGTGTTCTGCCGCCTTTTGGGTCATTTACCCATTaGTCAAGAACAGCTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: NPFGGKHAACFSSVLPPFGSFTH*SRTASC Trigger: ACAAGAAGCTGTTCTTGACAAATGGGTAAATGACCC...AAAAGGCGGCAGAACACTAGAGAAGCAGGCAGCGTGTTTGCCACCAAATGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGGTGGCTAGATCATACTGCTCGTCCAGAAGAGGAGCAAACGCATTTTCCAGCTTCTTGTACCTTCTaGATGAGACGCTGCTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: SWWLDHTARPEEEQTHFPASCTF*MRRCLM Trigger: CATTAAGCAGCGTCTCATCAAGAAGGTACAAGAAGC...TGGAAAATGCGTTTGCTCCTCTTCTGGACGAGCAGTATGATCTAGCCACCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCTGAAAGGGTCACACATCTCTCTCCTTCAATAATGAGAGCTCTATTTTGCAGAACTTCGTTGGTGTaGGCCTTCAGACACTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SPERVTHLSPSIMRALFCRTSLV*AFRHST Trigger: AGTGGAGTGTCTGAAGGCCAACACCAACGAAGTTCT...GCAAAATAGAGCTCTCATTATTGAAGGAGAGAGATGTGTGACCCTTTCAGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGGAGACTCAAAATTCTGACAGTTACTaGGTAAACGCAGCTACCACA | + |
|
Preference number: 3 (lower is better) Translates to: LSELQAEGQVNKHMWETQNSDSY*VNAATT Trigger: TGTGGTAGCTGCGTTTACCAAGTAACTGTCAGAATT...TTGAGTCTCCCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATCATACTGCTCGTCCAGAAGAGGAGCAAACGCATTTTCCAAAACATCCGAGGGGTCATTTACCCATTaGTCAAGAACAGCTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RSYCSSRRGANAFSKTSEGSFTH*SRTASC Trigger: ACAAGAAGCTGTTCTTGACAAATGGGTAAATGACCC...CTCGGATGTTTTGGAAAATGCGTTTGCTCCTCTTCTGGACGAGCAGTATGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGAATTGAGTTTCTGCAACAAACACCATATGTGGCATGCCAAGTTTAAAGTAACAGTTTCCCAAGCCTaGCAGCTGAAATGTTACCGT | + |
|
Preference number: 3 (lower is better) Translates to: AELSFCNKHHMWHAKFKVTVSQA*QLKCYR Trigger: ACGGTAACATTTCAGCTGCAAGGCTTGGGAAACTGT...TACTTTAAACTTGGCATGCCACATATGGTGTTTGTTGCAGAAACTCAATTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
||
| 3UTR TCA 72 bp | TTTGTATCGTCAGTGACAGCTTTCATTCAGCAGAATTaGGTTTCTGCAACAAACACCATATGTGGCATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FVSSVTAFIQQN*VSATNTICGMP Trigger: TGGCATGCCACATATGGTGTTTGTTGCAGAAACTCAATTCTGCTGAATGAAAGCTGTCACTGACGATACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
||
| 3UTR GCA 72 bp | GTCAGTGACAGCTTTCATTCAGCAGAATTGAGTTTCTaGAACAAACACCATATGTGGCATGCCAAGTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSDSFHSAELSF*NKHHMWHAKFK Trigger: TTTAAACTTGGCATGCCACATATGGTGTTTGTTGCAGAAACTCAATTCTGCTGAATGAAAGCTGTCACTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAATCCTGCGTACATACAAAAAGAAATATCCACCCACCATTTTGTAGAACAATGCTTAATGTTGTTATaGGTGAGAGGATGTGTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: QNPAYIQKEISTHHFVEQCLMLL*VRGCVV Trigger: GACGACACATCCTCTCACCAATAACAACATTAAGCA...TTGTTCTACAAAATGGTGGGTGGATATTTCTTTTTGTATGTACGCAGGATTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAATTTCCCTATACATCATTATAAAGGGAAGGGCAAACCCATTTGGTGGCAAAAGACGCTGCTTAATGTaGTTATTGGTGAGAGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: LISLYIIIKGRANPFGGKRRCLM*LLVRGC Trigger: ACATCCTCTCACCAATAACAACATTAAGCAGCGTCT...TTTGCCACCAAATGGGTTTGCCCTTCCCTTTATAATGATGTATAGGGAAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTGAGAGTGGCAACAGGGGGTAGGGTGCCAATATGGCGAGAAGGTTGGTTAAACCCTCTCGGTCCTTaGGGCCCAGCAGGAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TVRVATGGRVPIWREGWLNPLGP*GPAGAP Trigger: AGGTGCTCCTGCTGGGCCTCAAGGACCGAGAGGGTT...TAACCAACCTTCTCGCCATATTGGCACCCTACCCCCTGTTGCCACTCTCACTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059680.7 ENSMUST00000228671.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGGAGACTCAAAACCCTCTCGGTCCTTaGGGCCCAGCAGGAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSELQAEGQVNKHMWETQNPLGP*GPAGAP Trigger: AGGTGCTCCTGCTGGGCCTCAAGGACCGAGAGGGTT...TTGAGTCTCCCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059680.7 ENSMUST00000228671.2 |
||
| CDS-3UTR TCA 90 bp | GTGCATGAGGTGGGGGCTGGAGGTACTCTGAAGGTCACAGTACACCAGAAACCCACTGTCTCTGGAGGCTaGGTCTCCTTAACATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHEVGAGGTLKVTVHQKPTVSGG*VSLTCF Trigger: AAAGCATGTTAAGGAGACTCAGCCTCCAGAGACAGT...GGGTTTCTGGTGTACTGTGACCTTCAGAGTACCTCCAGCCCCCACCTCATGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059680.7 ENSMUST00000228671.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCTGAAAGGGTCACACATCTCTCTCCTTCAATAATGAGAGCTCTATTTTGCTTGTCGTCGTCGTCCTaGTCGTCGCGGCGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPERVTHLSPSIMRALFCLSSSS*SSRRLC Trigger: GCAGAGCCGCCGCGACGAGCAGGACGACGACGACAA...GCAAAATAGAGCTCTCATTATTGAAGGAGAGAGATGTGTGACCCTTTCAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR CAA 72 bp | AACGCAGCTACCACAGCCCAGAGAACTTCGTTGGTGTaGGCCTTCAGACACTCCACTTCTGGGTCTAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NAATTAQRTSLV*AFRHSTSGSKS Trigger: TGACTTAGACCCAGAAGTGGAGTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGCTGTGGTAGCTGCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| 3UTR CAA 72 bp | TTGGTAAACGCAGCTACCACAGCCCAGAGAACTTCGTaGGTGTTGGCCTTCAGACACTCCACTTCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVNAATTAQRTS*VLAFRHSTSGS Trigger: AGACCCAGAAGTGGAGTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGCTGTGGTAGCTGCGTTTACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTGTGACTTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGGTGGCTAGATCATACTaGTCGTCCAGAAGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGCDLSELQAEGQVNKHMVARSY*SSRRGA Trigger: TGCTCCTCTTCTGGACGAGCAGTATGATCTAGCCAC...CATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAAGTCACAGCCAGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAGAGTGGCAACAGGGGGTAGGGTGCCAATATGGCGAGAAGGTTGGTTAGCTGCCGTACTCTCTTaGTGGCTAGATCATACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVRVATGGRVPIWREGWLAAVLS*WLDHTA Trigger: AGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGC...TAACCAACCTTCTCGCCATATTGGCACCCTACCCCCTGTTGCCACTCTCACTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
||
| 3UTR CAA 72 bp | ACTTCTGGGTCTAAGTCAAGGAGCTGCCGTACTCTCTaGGTGGCTAGATCATACTGCTCGTCCAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGSKSRSCRTL*VARSYCSSRRG Trigger: TCCTCTTCTGGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGACCCAGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGTTACAAACAGAAAGAGGAAGGCCTCTCGTACCAGCAGAATCCTGCGTACGCCGTACTCTCTTGGTaGCTAGATCATACTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VGYKQKEEGLSYQQNPAYAVLSW*LDHTAR Trigger: ACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGC...GTACGCAGGATTCTGCTGGTACGAGAGGCCTTCCTCTTTCTGTTTGTAACCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
||
| CDS-3UTR GCA 90 bp | CAGAATCCTGCGTACATACAAAAAGAAATATCCACCCACCATTTTGTAGAACAATTGTCGTCGTCGTCCTaGTCGTCGCGGCGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNPAYIQKEISTHHFVEQLSSSS*SSRRLC Trigger: GCAGAGCCGCCGCGACGAGCAGGACGACGACGACAA...TTGTTCTACAAAATGGTGGGTGGATATTTCTTTTTGTATGTACGCAGGATTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS-3UTR CCA 90 bp | TTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGGAGACTCAAGAACTTCGTTGGTGTTaGCCTTCAGACACTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: LSELQAEGQVNKHMWETQELRWC*PSDTPL Trigger: AAGTGGAGTGTCTGAAGGCCAACACCAACGAAGTTC...TTGAGTCTCCCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| CDS-3UTR TCA 90 bp | AACAAAAGCCAATTATTAGTGTGGGAAAGTACAAACTGCAGAAAACCAGAGTCATCACCTCTCGGTCCTTaGGGCCCAGCAGGAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: NKSQLLVWESTNCRKPESSPLGP*GPAGAP Trigger: AGGTGCTCCTGCTGGGCCTCAAGGACCGAGAGGTGA...TGACTCTGGTTTTCTGCAGTTTGTACTTTCCCACACTAATAATTGGCTTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226517.2 |
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| CDS-3UTR GCA 90 bp | TACTTGCTACCAATTTACATGCAACATCTGCTAGGACTGATATCTGATTTTCTTTTGTCGTCGTCGTCCTaGTCGTCGCGGCGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: YLLPIYMQHLLGLISDFLLSSSS*SSRRLC Trigger: GCAGAGCCGCCGCGACGAGCAGGACGACGACGACAA...AAGAAAATCAGATATCAGTCCTAGCAGATGTTGCATGTAAATTGGTAGCAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS-3UTR TCA 90 bp | AGATCATACTGCTCGTCCAGAAGAGGAGCAAACGCATTTTCCAAAACATCCGAGACAGTCATTCCAAAATaGTGTGTAACCCTCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: RSYCSSRRGANAFSKTSETVIPK*CVTLSV Trigger: GACCGAGAGGGTTACACATCATTTTGGAATGACTGT...CTCGGATGTTTTGGAAAATGCGTTTGCTCCTCTTCTGGACGAGCAGTATGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
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| CDS-3UTR TCA 90 bp | AAACTGTACTCAAGATTAGTACTGGTCACAAGCCTCTTTCCTACACAAATCATACATGGGCTAGGTAAATaGGGGCCAGCAAGCGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KLYSRLVLVTSLFPTQIIHGLGK*GPASAC Trigger: ACAAGCGCTTGCTGGCCCTCATTTACCTAGCCCATG...TATGATTTGTGTAGGAAAGAGGCTTGTGACCAGTACTAATCTTGAGTACAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| 3UTR CAA 72 bp | TGTACCTTCTTGATGAGACGCTGCTTAATGTTGTTATaGGTGAGAGGATGTGTCGTCATGTCAAACAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CTFLMRRCLMLL*VRGCVVMSNRR Trigger: CCTCCTGTTTGACATGACGACACATCCTCTCACCAATAACAACATTAAGCAGCGTCTCATCAAGAAGGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS-3UTR TCA 90 bp | ATAAAGAGCCCTGAAAGGGTCACACATCTCTCTCCTTCAATAATGAGAGCTCTAACAGTCATTCCAAAATaGTGTGTAACCCTCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: IKSPERVTHLSPSIMRALTVIPK*CVTLSV Trigger: GACCGAGAGGGTTACACATCATTTTGGAATGACTGT...TAGAGCTCTCATTATTGAAGGAGAGAGATGTGTGACCCTTTCAGGGCTCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059680.7 ENSMUST00000228671.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGAGGAAGGCCTCTCGTACCAGCAGAATCCTGCGTACATACAAAAAGAAAAAGAACATCCCCTGTTaGAGCATCCGATTTACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKASRTSRILRTYKKKKNIPC*SIRFTD Trigger: ATCTGTAAATCGGATGCTCCAACAGGGGATGTTCTT...TTTCTTTTTGTATGTACGCAGGATTCTGCTGGTACGAGAGGCCTTCCTCTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059680.7 ENSMUST00000228671.2 |
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| 3UTR CAA 72 bp | GCTTCTTGTACCTTCTTGATGAGACGCTGCTTAATGTaGTTATTGGTGAGAGGATGTGTCGTCATGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASCTFLMRRCLM*LLVRGCVVMSN Trigger: GTTTGACATGACGACACATCCTCTCACCAATAACAACATTAAGCAGCGTCTCATCAAGAAGGTACAAGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS-3UTR TCA 90 bp | AACAAAAGCCAATTATTAGTGTGGGAAAGTACAAACTGCAGAAAACCAGAGTCACGCTTGTCCATTCGGTaGGGGTCATTTACCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKSQLLVWESTNCRKPESRLSIR*GSFTHL Trigger: CAAATGGGTAAATGACCCTCACCGAATGGACAAGCG...TGACTCTGGTTTTCTGCAGTTTGTACTTTCCCACACTAATAATTGGCTTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| CDS-3UTR GCA 90 bp | AAGGCCTCTCGTACCAGCAGAATCCTGCGTACATACAAAAAGAAATATCCACCCTTCTTGATGAGACGCTaGTTAATGTTGTTATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KASRTSRILRTYKKKYPPFLMRR*LMLLLV Trigger: CACCAATAACAACATTAAGCAGCGTCTCATCAAGAA...GGGTGGATATTTCTTTTTGTATGTACGCAGGATTCTGCTGGTACGAGAGGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| CDS-3UTR CCA 90 bp | AACAAAAGCCAATTATTAGTGTGGGAAAGTACAAACTGCAGAAAACCAGAGTCAGTTCTGGACTGTCTCTaGAGGCTGAGTCTCCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NKSQLLVWESTNCRKPESVLDCL*RLSLLN Trigger: GTTAAGGAGACTCAGCCTCCAGAGACAGTCCAGAAC...TGACTCTGGTTTTCTGCAGTTTGTACTTTCCCACACTAATAATTGGCTTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059680.7 ENSMUST00000228671.2 |
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| CDS-3UTR CCA 90 bp | CAGAATCCTGCGTACATACAAAAAGAAATATCCACCCACCATTTTGTAGAACAACCCAGAGAACTTCGTTaGTGTTGGCCTTCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: QNPAYIQKEISTHHFVEQPRELR*CWPSDT Trigger: AGTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGG...TTGTTCTACAAAATGGTGGGTGGATATTTCTTTTTGTATGTACGCAGGATTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| 3UTR CAA 72 bp | GTGAGGGTCATTTACCCATTTGTCAAGAACAGCTTCTaGTACCTTCTTGATGAGACGCTGCTTAATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRVIYPFVKNSF*YLLDETLLNVV Trigger: AACAACATTAAGCAGCGTCTCATCAAGAAGGTACAAGAAGCTGTTCTTGACAAATGGGTAAATGACCCTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR CAA 72 bp | ATTTGTATCGTCAGTGACAGCTTTCATTCAGCAGAATaGAGTTTCTGCAACAAACACCATATGTGGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ICIVSDSFHSAE*SFCNKHHMWHA Trigger: GGCATGCCACATATGGTGTTTGTTGCAGAAACTCAATTCTGCTGAATGAAAGCTGTCACTGACGATACAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
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| CDS-3UTR GCA 90 bp | ATAACAACTGTAATCACACAACAGATTTACAAAGGAAGCAAAAATTCAAGGGGCTCTAAGTCAAGGAGCTaGCGTACTCTCTTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITTVITQQIYKGSKNSRGSKSRS*RTLLVA Trigger: AGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAGA...GCCCCTTGAATTTTTGCTTCCTTTGTAAATCTGTTGTGTGATTACAGTTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| 3UTR CAA 72 bp | TTCCTATCTGGTTCTTTTAAGACAGTTTCCCAAGCCTaGCAGCTGAAATGTTACCGTGCCATACTAAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSGSFKTVSQA*QLKCYRAILNN Trigger: GTTATTTAGTATGGCACGGTAACATTTCAGCTGCAAGGCTTGGGAAACTGTCTTAAAAGAACCAGATAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
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| 3UTR CAA 72 bp | TTTACCCATTTGTCAAGAACAGCTTCTTGTACCTTCTaGATGAGACGCTGCTTAATGTTGTTATTGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTHLSRTASCTF*MRRCLMLLLVR Trigger: TCTCACCAATAACAACATTAAGCAGCGTCTCATCAAGAAGGTACAAGAAGCTGTTCTTGACAAATGGGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS-3UTR CCA 90 bp | ATAACAACTGTAATCACACAACAGATTTACAAAGGAAGCAAAAATTCAAGGGGCAAGAACATCCCCTGTTaGAGCATCCGATTTACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITTVITQQIYKGSKNSRGKNIPC*SIRFTD Trigger: ATCTGTAAATCGGATGCTCCAACAGGGGATGTTCTT...GCCCCTTGAATTTTTGCTTCCTTTGTAAATCTGTTGTGTGATTACAGTTGTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059680.7 ENSMUST00000228671.2 |
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| 3UTR CAA 72 bp | ACAAAATTCTTAATCGTCTTGAGTTGTAGTCGTTACTaGCTACCAATTTACATGCAACATCTGCTAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: TKFLIVLSCSRY*LPIYMQHLLGL Trigger: CAGTCCTAGCAGATGTTGCATGTAAATTGGTAGCAAGTAACGACTACAACTCAAGACGATTAAGAATTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| 3UTR CAA 72 bp | ATAGCAGAGCTTTCTGTTACAAAATTCTTAATCGTCTaGAGTTGTAGTCGTTACTTGCTACCAATTTACATG | + |
|
Preference number: 4 (lower is better) Translates to: IAELSVTKFLIV*SCSRYLLPIYM Trigger: CATGTAAATTGGTAGCAAGTAACGACTACAACTCAAGACGATTAAGAATTTTGTAACAGAAAGCTCTGCTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS GCA 90 bp | CGTCGTCCTGCTCGTCGCGGCGGCTCTGCGCCTCGTCCTCGCCGCTaGCGCCGCCGCCTCCCGCCGCCCGCTCCTTGTCGGCAGCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: RRPARRGGSAPRPRR*RRRLPPPAPCRQRS Trigger: GGAACGCTGCCGACAAGGAGCGGGCGGCGGGAGGCGGCGGCGGCAGCGGCGAGGACGAGGCGCAGAGCCGCCGCGACGAGCAGGACGACG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS GCA 90 bp | CTCCCGCCGCCCGCTCCTTGTCGGCAGCGTTCCGGGAGGCCTCGGTaGGCCGCTGCACCAGGCCCGAGCTCCGCTGGGTCAGCGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPPPAPCRQRSGRPR*AAAPGPSSAGSARS Trigger: TGACCTCGCTGACCCAGCGGAGCTCGGGCCTGGTGCAGCGGCGCACCGAGGCCTCCCGGAACGCTGCCGACAAGGAGCGGGCGGCGGGAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS GCA 90 bp | AGGGTCAGCCGCGTTTCCTTGGAGTCGCCCTTGTCGTCGTCGTCCTaGTCGTCGCGGCGGCTCTGCGCCTCGTCCTCGCCGCTGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RVSRVSLESPLSSSS*SSRRLCASSSPLPP Trigger: CGGCGGCAGCGGCGAGGACGAGGCGCAGAGCCGCCGCGACGAGCAGGACGACGACGACAAGGGCGACTCCAAGGAAACGCGGCTGACCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS CCA 90 bp | GGCCCAGCAGGAGCACCTCCTCCATCAGGGTCAGCCGCGTTTCCTTaGAGTCGCCCTTGTCGTCGTCGTCCTGCTCGTCGCGGCGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPAGAPPPSGSAAFP*SRPCRRRPARRGGS Trigger: AGAGCCGCCGCGACGAGCAGGACGACGACGACAAGGGCGACTCCAAGGAAACGCGGCTGACCCTGATGGAGGAGGTGCTCCTGCTGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS-3UTR CAA 90 bp | GGCTGTGACTTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGAGAACTTCGTTGGTGTaGGCCTTCAGACACTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GCDLSELQAEGQVNKHMWRTSLV*AFRHST Trigger: AGTGGAGTGTCTGAAGGCCAACACCAACGAAGTTCT...CCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAAGTCACAGCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| CDS-3UTR CAA 90 bp | TTGTCTGAACTGCAGGCAGAAGGCCAGGTGAATAAGCACATGTGGGAGACTCAAAGCTGCCGTACTCTCTaGGTGGCTAGATCATACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSELQAEGQVNKHMWETQSCRTL*VARSYC Trigger: GCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCT...TTGAGTCTCCCACATGTGCTTATTCACCTGGCCTTCTGCCTGCAGTTCAGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| CDS-3UTR CAA 90 bp | CTAAGTCAAGGAGCTGCCGTACTCTCTTGGTGGCTAGATCATACTGCTCGTCCAGAAGAACATCCCCTGTaGGAGCATCCGATTTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSQGAAVLSWWLDHTARPEEHPL*EHPIYR Trigger: TCTGTAAATCGGATGCTCCAACAGGGGATGTTCTTC...TGGACGAGCAGTATGATCTAGCCACCAAGAGAGTACGGCAGCTCCTTGACTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228671.2 |
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| CDS-3UTR CAA 90 bp | AAGGCCTCTCGTACCAGCAGAATCCTGCGTACATACAAAAAGAAATATCCACCCGCCCAGAGAACTTCGTaGGTGTTGGCCTTCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: KASRTSRILRTYKKKYPPAQRTS*VLAFRH Trigger: GTGTCTGAAGGCCAACACCAACGAAGTTCTCTGGGC...GGGTGGATATTTCTTTTTGTATGTACGCAGGATTCTGCTGGTACGAGAGGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| CDS-3UTR CAA 90 bp | ACAGTGAGAGTGGCAACAGGGGGTAGGGTGCCAATATGGCGAGAAGGTTGGTTATGCTTAATGTTGTTATaGGTGAGAGGATGTGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: TVRVATGGRVPIWREGWLCLMLL*VRGCVV Trigger: GACGACACATCCTCTCACCAATAACAACATTAAGCA...TAACCAACCTTCTCGCCATATTGGCACCCTACCCCCTGTTGCCACTCTCACTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| CDS-3UTR CAA 90 bp | ACAGTGAGAGTGGCAACAGGGGGTAGGGTGCCAATATGGCGAGAAGGTTGGTTAGGGTCATTTACCCATTaGTCAAGAACAGCTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TVRVATGGRVPIWREGWLGSFTH*SRTASC Trigger: ACAAGAAGCTGTTCTTGACAAATGGGTAAATGACCC...TAACCAACCTTCTCGCCATATTGGCACCCTACCCCCTGTTGCCACTCTCACTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| CDS-3UTR CAA 90 bp | AAGGCCTCTCGTACCAGCAGAATCCTGCGTACATACAAAAAGAAATATCCACCCGAAGAACATCCCCTGTaGGAGCATCCGATTTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: KASRTSRILRTYKKKYPPEEHPL*EHPIYR Trigger: TCTGTAAATCGGATGCTCCAACAGGGGATGTTCTTC...GGGTGGATATTTCTTTTTGTATGTACGCAGGATTCTGCTGGTACGAGAGGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059680.7 ENSMUST00000228671.2 |
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| CDS-3UTR CAA 90 bp | AACAAAAGCCAATTATTAGTGTGGGAAAGTACAAACTGCAGAAAACCAGAGTCAGCTTCTTGTACCTTCTaGATGAGACGCTGCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: NKSQLLVWESTNCRKPESASCTF*MRRCLM Trigger: CATTAAGCAGCGTCTCATCAAGAAGGTACAAGAAGC...TGACTCTGGTTTTCTGCAGTTTGTACTTTCCCACACTAATAATTGGCTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| CDS-3UTR CAA 90 bp | AACAAAAGCCAATTATTAGTGTGGGAAAGTACAAACTGCAGAAAACCAGAGTCAAGACGCTGCTTAATGTaGTTATTGGTGAGAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: NKSQLLVWESTNCRKPESRRCLM*LLVRGC Trigger: ACATCCTCTCACCAATAACAACATTAAGCAGCGTCT...TGACTCTGGTTTTCTGCAGTTTGTACTTTCCCACACTAATAATTGGCTTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059680.7 |
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| CDS CAA 90 bp | GCCTCGTCCTCGCCGCTGCCGCCGCCGCCTCCCGCCGCCCGCTCCTaGTCGGCAGCGTTCCGGGAGGCCTCGGTGCGCCGCTGCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASSSPLPPPPPAARS*SAAFREASVRRCTR Trigger: CCTGGTGCAGCGGCGCACCGAGGCCTCCCGGAACGCTGCCGACAAGGAGCGGGCGGCGGGAGGCGGCGGCGGCAGCGGCGAGGACGAGGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS CAA 90 bp | AGCACCTCCTCCATCAGGGTCAGCCGCGTTTCCTTGGAGTCGCCCTaGTCGTCGTCGTCCTGCTCGTCGCGGCGGCTCTGCGCCTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: STSSIRVSRVSLESP*SSSSCSSRRLCASS Trigger: GGACGAGGCGCAGAGCCGCCGCGACGAGCAGGACGACGACGACAAGGGCGACTCCAAGGAAACGCGGCTGACCCTGATGGAGGAGGTGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS CAA 90 bp | AGGCCCAGCAGGAGCACCTCCTCCATCAGGGTCAGCCGCGTTTCCTaGGAGTCGCCCTTGTCGTCGTCGTCCTGCTCGTCGCGGCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPSRSTSSIRVSRVS*ESPLSSSSCSSRRL Trigger: GAGCCGCCGCGACGAGCAGGACGACGACGACAAGGGCGACTCCAAGGAAACGCGGCTGACCCTGATGGAGGAGGTGCTCCTGCTGGGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS CAA 72 bp | TCCATCAGGGTCAGCCGCGTTTCCTTGGAGTCGCCCTaGTCGTCGTCGTCCTGCTCGTCGCGGCGGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SIRVSRVSLESP*SSSSCSSRRLC Trigger: GCAGAGCCGCCGCGACGAGCAGGACGACGACGACAAGGGCGACTCCAAGGAAACGCGGCTGACCCTGATGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS CCA 72 bp | GGAGCACCTCCTCCATCAGGGTCAGCCGCGTTTCCTTaGAGTCGCCCTTGTCGTCGTCGTCCTGCTCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GAPPPSGSAAFP*SRPCRRRPARR Trigger: GCGACGAGCAGGACGACGACGACAAGGGCGACTCCAAGGAAACGCGGCTGACCCTGATGGAGGAGGTGCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059680.7 ENSMUST00000226517.2 ENSMUST00000228671.2 |
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| CDS CAA 72 bp | CATGCTTTAGAGCTTCATCAAGAAGAACATCCCCTGTaGGAGCATCCGATTTACAGATCACCTTTCTGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: HALELHQEEHPL*EHPIYRSPFWL Trigger: TAACCAGAAAGGTGATCTGTAAATCGGATGCTCCAACAGGGGATGTTCTTCTTGATGAAGCTCTAAAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059680.7 ENSMUST00000228671.2 |
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