RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GOLM1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021556

Ensembl transcript IDs: ENSMUST00000022039.7, ENSMUST00000095739.10

Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGGACAGAAACTGGCAAGCGGCAGCACAAGGAGGGAGCCGCTGTaGCCAGCAGCTGCCCTCAGTCTACTCTGTCTTACACTGCAGGGT +
Preference number: 1 (lower is better)
Translates to: CGQKLASGSTRREPL*PAAALSLLCLTLQG
Trigger: ACCCTGCAGTGTAAGACAGAGTAGACTGAGGGCAGCTGCTGGCCACAGCGGCTCCCTCCTTGTGCTGCCGCTTGCCAGTTTCTGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 90 bp AGCCGCTGTGGCCAGCAGCTGCCCTCAGTCTACTCTGTCTTACACTaGAGGGTGAGGAGGTGCTGCTGCCTAGACAGGACAGCCTCATTT +
Preference number: 1 (lower is better)
Translates to: SRCGQQLPSVYSVLH*RVRRCCCLDRTASF
Trigger: AAATGAGGCTGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGACTGAGGGCAGCTGCTGGCCACAGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 90 bp AACCTGAGTATCCTCCAGCAGCCAACCCTTCCTCTTGGACACCTCTaGCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTT +
Preference number: 1 (lower is better)
Translates to: NLSILQQPTLPLGHL*PCSLCPERSAGTAF
Trigger: AAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAGGATACTCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 90 bp AGTATCCTCCAGCAGCCAACCCTTCCTCTTGGACACCTCTGCCCATaGAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGT +
Preference number: 1 (lower is better)
Translates to: SILQQPTLPLGHLCP*SLCPERSAGTAFLS
Trigger: ACTAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAGGATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 90 bp CCCTCAGTCTACTCTGTCTTACACTGCAGGGTGAGGAGGTGCTGCTaGCTAGACAGGACAGCCTCATTTCTCTTTTTGGTGTTGACCTGC +
Preference number: 1 (lower is better)
Translates to: PSVYSVLHCRVRRCC*LDRTASFLFLVLTC
Trigger: GCAGGTCAACACCAAAAAGAGAAATGAGGCTGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGACTGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 90 bp CTGCCCTCAGTCTACTCTGTCTTACACTGCAGGGTGAGGAGGTGCTaGTGCCTAGACAGGACAGCCTCATTTCTCTTTTTGGTGTTGACC +
Preference number: 1 (lower is better)
Translates to: LPSVYSVLHCRVRRC*CLDRTASFLFLVLT
Trigger: GGTCAACACCAAAAAGAGAAATGAGGCTGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGACTGAGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 90 bp CAGCTGCCCTCAGTCTACTCTGTCTTACACTGCAGGGTGAGGAGGTaGTGCTGCCTAGACAGGACAGCCTCATTTCTCTTTTTGGTGTTG +
Preference number: 1 (lower is better)
Translates to: QLPSVYSVLHCRVRR*CCLDRTASFLFLVL
Trigger: CAACACCAAAAAGAGAAATGAGGCTGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGACTGAGGGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 90 bp CAGGGGCTTTCATTCTTGCTCATCTTAGCTTGGCACTCACTATGTTaGTTTAGGCTGGCTCAGAACTTGCAGCAATCTCCTGCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: QGLSFLLILAWHSLC*FRLAQNLQQSPASA
Trigger: GGCTGAGGCAGGAGATTGCTGCAAGTTCTGAGCCAGCCTAAAGCAACATAGTGAGTGCCAAGCTAAGATGAGCAAGAATGAAAGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 90 bp GTAGGTTTTGTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTaGTGCTCATTCCTCTGCTGGTCTTGTCACTGGTGTGCTGTGACA +
Preference number: 1 (lower is better)
Translates to: VGFVLGHQQETPSLI*CSFLCWSCHWCAVT
Trigger: TGTCACAGCACACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAACAAAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 90 bp AGCCCAACCCTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCATaGCTGACTGGACTTGATCAAGATGCTAGCGAAGACAGGATGTTG +
Preference number: 1 (lower is better)
Translates to: SPTLWHLPFPRNTEA*LTGLDQDASEDRML
Trigger: CAACATCCTGTCTTCGCTAGCATCTTGATCAAGTCCAGTCAGGCATGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 90 bp ATCCTTGATTTGCTGCTCATTCCTCTGCTGGTCTTGTCACTGGTGTaGTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTACTC +
Preference number: 1 (lower is better)
Translates to: ILDLLLIPLLVLSLV*CDNCLSPWGFPFVL
Trigger: GAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CCA 90 bp CAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGGAGGGAGCCGCTGTaGCCAGCAGCTGCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: QPTLPLGHLCPCSLCPERRREPL*PAAALS
Trigger: ACTGAGGGCAGCTGCTGGCCACAGCGGCTCCCTCCT...GCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CCA 90 bp GCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGTGAGAAGGAGGGAGCCGCTGTaGCCAGCAGCTGCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: AHAAFVQSAVQALPFLVRRREPL*PAAALS
Trigger: ACTGAGGGCAGCTGCTGGCCACAGCGGCTCCCTCCT...TCTCACTAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR GCA 90 bp GAGTATCCTCCAGCAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTGCTGTGGCCAGCAGCTaGCCTCAGTCTACTCTGTCT +
Preference number: 2 (lower is better)
Translates to: EYPPAANPSSWTPLPMQPAVASS*PQSTLS
Trigger: AGACAGAGTAGACTGAGGGCAGCTGCTGGCCACAGC...AGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAGGATACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR GCA 90 bp GCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGTGAGAGTGAGGAGGTGCTGCTaGCTAGACAGGACAGCCTCA +
Preference number: 2 (lower is better)
Translates to: AHAAFVQSAVQALPFLVRVRRCC*LDRTAS
Trigger: TGAGGCTGTCCTGTCTAGGCAGCAGCACCTCCTCAC...TCTCACTAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR GCA 90 bp CAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCTGGCACTCACTATGTTaGTTTAGGCTGGCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: QPTLPLGHLCPCSLCPERWHSLC*FRLAQN
Trigger: GTTCTGAGCCAGCCTAAAGCAACATAGTGAGTGCCA...GCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR GCA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGCTTGCAGCAATCTCCTaGCTCAGCCTTCCGAATCCT +
Preference number: 2 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPLAAIS*LSLPNP
Trigger: AGGATTCGGAAGGCTGAGGCAGGAGATTGCTGCAAG...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR GCA 90 bp ACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTATGGCACTCACTATGTTaGTTTAGGCTGGCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: TSAHAAFVQSAVQALPFLWHSLC*FRLAQN
Trigger: GTTCTGAGCCAGCCTAAAGCAACATAGTGAGTGCCA...TAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR TCA 90 bp GAGTATCCTCCAGCAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTAGTAACAACTCTCACTaGTATTTGAGACAGGGGCTT +
Preference number: 2 (lower is better)
Translates to: EYPPAANPSSWTPLPMQPSNNSH*YLRQGL
Trigger: AAGCCCCTGTCTCAAATATCAGTGAGAGTTGTTACT...AGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAGGATACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR TCA 90 bp GTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCGGCCTAACTCTAATGTaGCAGTGTTCGTTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: VLGHQQETPSLICCSFLCGLTLM*QCSLVL
Trigger: CAGCACCAACGAACACTGTCACATTAGAGTTAGGCC...GCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CAA 90 bp TGTAGGTTTTGTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTaGCTGCTCATTCCTCTGCTGGTCTTGTCACTGGTGTGCTGTGAC +
Preference number: 2 (lower is better)
Translates to: CRFCSWPPARDPILD*LLIPLLVLSLVCCD
Trigger: GTCACAGCACACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAACAAAACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR GCA 90 bp TGGTGGAATCAAGTGTGTGCAGGAGTGATGAGCTACTTAATATCTGTGGACAGAGCTGTGGCCAGCAGCTaGCCTCAGTCTACTCTGTCT +
Preference number: 2 (lower is better)
Translates to: WWNQVCAGVMSYLISVDRAVASS*PQSTLS
Trigger: AGACAGAGTAGACTGAGGGCAGCTGCTGGCCACAGC...TCTGTCCACAGATATTAAGTAGCTCATCACTCCTGCACACACTTGATTCCACCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR GCA 90 bp GAAACAACCCACGTCTGCCATAGGGGTTTAAATGTGTGCTTTAAAGAGGCACAGGGCTGGCTCAGAACTTaGAGCAATCTCCTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: ETTHVCHRGLNVCFKEAQGWLRT*SNLLPQ
Trigger: CTGAGGCAGGAGATTGCTGCAAGTTCTGAGCCAGCC...CTGTGCCTCTTTAAAGCACACATTTAAACCCCTATGGCAGACGTGGGTTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR GCA 90 bp GCTGTTTTAAAGTGGTTTATTGTACTCCATGGGGTAACTGGGCTGGAATGCATTTGCAGGGTGAGGAGGTaGTGCTGCCTAGACAGGACA +
Preference number: 2 (lower is better)
Translates to: AVLKWFIVLHGVTGLECICRVRR*CCLDRT
Trigger: TGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCA...AATGCATTCCAGCCCAGTTACCCCATGGAGTACAATAAACCACTTTAAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
3UTR-3UTR CCA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGGTCATGCATGGCTATTaGTACCCTGGAATCTTAGAA +
Preference number: 2 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPVMHGY*YPGILE
Trigger: TTCTAAGATTCCAGGGTACCAATAGCCATGCATGAC...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CCA 90 bp GCGTTACCCAGAGTCTGCAGGTGTAAGCCTCTACTCCCAAGCTCTGAGGCTTGCACTCTAAGATTTCAGTaGCCTAACTCTAATGTGACA +
Preference number: 2 (lower is better)
Translates to: ALPRVCRCKPLLPSSEACTLRFQ*PNSNVT
Trigger: TGTCACATTAGAGTTAGGCCACTGAAATCTTAGAGT...GCAAGCCTCAGAGCTTGGGAGTAGAGGCTTACACCTGCAGACTCTGGGTAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
3UTR-3UTR GCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGTGCAGGGTGAGGAGGTaGTGCTGCCTAGACAGGACA +
Preference number: 2 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKCRVRR*CCLDRT
Trigger: TGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCA...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR GCA 90 bp AGTTACCCTCAGCTATGTACTATGTTTGAGGCCCACCTTGGCTACACGAGATTGCCATCCTTGATTTGCTaGTCATTCCTCTGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: SYPQLCTMFEAHLGYTRLPSLIC*SFLCWS
Trigger: AGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGG...CAATCTCGTGTAGCCAAGGTGGGCCTCAAACATAGTACATAGCTGAGGGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
3UTR-3UTR TCA 90 bp GTCTGCAATCAGAAGCTGCTGATCGGAATCAAGACTTACGATGCATTACCATCACGTAGGAATCCAGCTTaGAACCTGAGTATCCTCCAG +
Preference number: 2 (lower is better)
Translates to: VCNQKLLIGIKTYDALPSRRNPA*NLSILQ
Trigger: CTGGAGGATACTCAGGTTTCAAGCTGGATTCCTACG...TGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CAA 90 bp GAACTGACTAGTGGTGTTTATGCTGACGGTAAGAGCTCTAGGCCATaGATGGTGGAATCAAGTGTGTGCAGGAGTGATGAGCTACTTAAT +
Preference number: 2 (lower is better)
Translates to: ELTSGVYADGKSSRP*MVESSVCRSDELLN
Trigger: ATTAAGTAGCTCATCACTCCTGCACACACTTGATTCCACCATCAATGGCCTAGAGCTCTTACCGTCAGCATAAACACCACTAGTCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR TCA 90 bp CTCAGCTATGTACTATGTTTGAGGCCCACCTTGGCTACACGAGATTGTGTCTTAGTGCTTTTAGCAGAGTaGGCCACCCTGAAATTCAAT +
Preference number: 2 (lower is better)
Translates to: LSYVLCLRPTLATRDCVLVLLAE*ATLKFN
Trigger: ATTGAATTTCAGGGTGGCTCACTCTGCTAAAAGCAC...TAAGACACAATCTCGTGTAGCCAAGGTGGGCCTCAAACATAGTACATAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
3UTR-3UTR CCA 90 bp GCTGTTTTAAAGTGGTTTATTGTACTCCATGGGGTAACTGGGCTGGAATGCATTTGCTCATTCCTCTGCTaGTCTTGTCACTGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: AVLKWFIVLHGVTGLECICSFLC*SCHWCA
Trigger: AGCACACCAGTGACAAGACCAGCAGAGGAATGAGCA...AATGCATTCCAGCCCAGTTACCCCATGGAGTACAATAAACCACTTTAAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
3UTR-3UTR TCA 90 bp GAAACAACCCACGTCTGCCATAGGGGTTTAAATGTGTGCTTTAAAGAGGCACAGAGTAACAACTCTCACTaGTATTTGAGACAGGGGCTT +
Preference number: 2 (lower is better)
Translates to: ETTHVCHRGLNVCFKEAQSNNSH*YLRQGL
Trigger: AAGCCCCTGTCTCAAATATCAGTGAGAGTTGTTACT...CTGTGCCTCTTTAAAGCACACATTTAAACCCCTATGGCAGACGTGGGTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR TCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGCGTAGGAATCCAGCTTaGAACCTGAGTATCCTCCAG +
Preference number: 2 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKRRNPA*NLSILQ
Trigger: CTGGAGGATACTCAGGTTTCAAGCTGGATTCCTACG...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CCA 90 bp TTTGAGGCCCACCTTGGCTACACGAGATTGTGTCTTAAACACCAAACAACCCTATATGTTGCTTTAGGCTaGCTCAGAACTTGCAGCAAT +
Preference number: 2 (lower is better)
Translates to: FEAHLGYTRLCLKHQTTLYVALG*LRTCSN
Trigger: ATTGCTGCAAGTTCTGAGCCAGCCTAAAGCAACATA...TAGGGTTGTTTGGTGTTTAAGACACAATCTCGTGTAGCCAAGGTGGGCCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
3UTR-3UTR CCA 90 bp GAAACAACCCACGTCTGCCATAGGGGTTTAAATGTGTGCTTTAAAGAGGCACAGTATGTTGCTTTAGGCTaGCTCAGAACTTGCAGCAAT +
Preference number: 2 (lower is better)
Translates to: ETTHVCHRGLNVCFKEAQYVALG*LRTCSN
Trigger: ATTGCTGCAAGTTCTGAGCCAGCCTAAAGCAACATA...CTGTGCCTCTTTAAAGCACACATTTAAACCCCTATGGCAGACGTGGGTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGTGCTGGTCTTGTCACTaGTGTGCTGTGACAACTGTC +
Preference number: 2 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKCWSCH*CAVTTV
Trigger: GACAGTTGTCACAGCACACCAGTGACAAGACCAGCA...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR TCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGGCAATCAGAAGCTGCTaGTCGGAATCAAGACTTACG +
Preference number: 2 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKAIRSC*SESRLT
Trigger: CGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGC...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR GCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGAAAACCACATCACACTaGAGTGTCTGCTGCTGGTAT +
Preference number: 2 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKKTTSH*SVCCWY
Trigger: ATACCAGCAGCAGACACTGCAGTGTGATGTGGTTTT...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGCCAAAGGGTAGAATGTaGCCCTTACCTATTGTACTT +
Preference number: 2 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKPKGRM*PLPIVL
Trigger: AAGTACAATAGGTAAGGGCCACATTCTACCCTTTGG...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGGTCATGCATGGCTATTaGTACCCTGGAATCTTAGAA +
Preference number: 2 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKVMHGY*YPGILE
Trigger: TTCTAAGATTCCAGGGTACCAATAGCCATGCATGAC...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp CAGCAGCCAACCCTTCCTCTTGGACACCTCTGCCCATaGAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCC +
Preference number: 3 (lower is better)
Translates to: QQPTLPLGHLCP*SLCPERSAGTA
Trigger: GGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp ATCCTCCAGCAGCCAACCCTTCCTCTTGGACACCTCTaGCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGC +
Preference number: 3 (lower is better)
Translates to: ILQQPTLPLGHL*PCSLCPERSAG
Trigger: GCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp GGCCAGCAGCTGCCCTCAGTCTACTCTGTCTTACACTaGAGGGTGAGGAGGTGCTGCTGCCTAGACAGGACA +
Preference number: 3 (lower is better)
Translates to: GQQLPSVYSVLH*RVRRCCCLDRT
Trigger: TGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGACTGAGGGCAGCTGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CCA 72 bp AAACTGGCAAGCGGCAGCACAAGGAGGGAGCCGCTGTaGCCAGCAGCTGCCCTCAGTCTACTCTGTCTTACA +
Preference number: 3 (lower is better)
Translates to: KLASGSTRREPL*PAAALSLLCLT
Trigger: TGTAAGACAGAGTAGACTGAGGGCAGCTGCTGGCCACAGCGGCTCCCTCCTTGTGCTGCCGCTTGCCAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CCA 72 bp AAACCTGAGTATCCTCCAGCAGCCAACCCTTCCTCTTaGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCG +
Preference number: 3 (lower is better)
Translates to: KPEYPPAANPSS*TPLPMQPLSRA
Trigger: CGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAGGATACTCAGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CCA 72 bp GGAGTGATGAGCTACTTAATATCTGTGGACAGAAACTaGCAAGCGGCAGCACAAGGAGGGAGCCGCTGTGGC +
Preference number: 3 (lower is better)
Translates to: GVMSYLISVDRN*QAAAQGGSRCG
Trigger: GCCACAGCGGCTCCCTCCTTGTGCTGCCGCTTGCCAGTTTCTGTCCACAGATATTAAGTAGCTCATCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp TTGCTGCTCATTCCTCTGCTGGTCTTGTCACTGGTGTaGTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCA +
Preference number: 3 (lower is better)
Translates to: LLLIPLLVLSLV*CDNCLSPWGFP
Trigger: TGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp CTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTaGTCATTCCTCTGCTGGTCTTGTCACTGGTGTGCT +
Preference number: 3 (lower is better)
Translates to: LGHQQETPSLIC*SFLCWSCHWCA
Trigger: AGCACACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CAA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGCTGTCCATTTCACAGTaGAGTCACAGTGAACCCCCG +
Preference number: 3 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPLSISQ*SHSEPP
Trigger: CGGGGGTTCACTGTGACTCAACTGTGAAATGGACAG...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CAA 90 bp ACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAAAGAGCTCTAGGCCATaGATGGTGGAATCAAGTGTG +
Preference number: 3 (lower is better)
Translates to: TSAHAAFVQSAVQALPFLKSSRP*MVESSV
Trigger: CACACTTGATTCCACCATCAATGGCCTAGAGCTCTT...TAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CAA 90 bp GTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTAGGCTGGCTCAGAACTaGCAGCAATCTCCTGCCTCA +
Preference number: 3 (lower is better)
Translates to: VLSLVCCDNCLSPWGFPFRLAQN*QQSPAS
Trigger: TGAGGCAGGAGATTGCTGCAAGTTCTGAGCCAGCCT...AAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR TCA 72 bp GCTCATTCCTCTGCTGGTCTTGTCACTGGTGTGCTGTaGCAACTGTCTAAGCCCGTGGGGTTTCCCATTTGT +
Preference number: 3 (lower is better)
Translates to: AHSSAGLVTGVL*QLSKPVGFPIC
Trigger: ACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCAGAGGAATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp GAAACAACCCACGTCTGCCATAGGGGTTTAAATGTGTaGTTTAAAGAGGCACAGACAGCTGGACCACCCGGC +
Preference number: 3 (lower is better)
Translates to: ETTHVCHRGLNV*FKEAQTAGPPG
Trigger: GCCGGGTGGTCCAGCTGTCTGTGCCTCTTTAAAGCACACATTTAAACCCCTATGGCAGACGTGGGTTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp GTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTaGTGCTCATTCCTCTGCTGGTCTTGTCACTGGTGT +
Preference number: 3 (lower is better)
Translates to: VLGHQQETPSLI*CSFLCWSCHWC
Trigger: ACACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CAA 90 bp TCTAGTGCTGCTGCTTCCTATTTAGCCAGCACTTCAGAGTCAGATCAGCCACTCAGGCTGGCTCAGAACTaGCAGCAATCTCCTGCCTCA +
Preference number: 3 (lower is better)
Translates to: SSAAASYLASTSESDQPLRLAQN*QQSPAS
Trigger: TGAGGCAGGAGATTGCTGCAAGTTCTGAGCCAGCCT...GAGTGGCTGATCTGACTCTGAAGTGCTGGCTAAATAGGAAGCAGCAGCACTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CAA 90 bp CAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCTTTCTCTTTTTGGTGTaGACCTGCTTAAGAAATACC +
Preference number: 3 (lower is better)
Translates to: QPTLPLGHLCPCSLCPERFLFLV*TCLRNT
Trigger: GGTATTTCTTAAGCAGGTCAACACCAAAAAGAGAAA...GCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CAA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGAAAGTCCCCTTGAGTTaGGGACCTAGGAGCAGAAAA +
Preference number: 3 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPKVPLS*GPRSRK
Trigger: TTTTCTGCTCCTAGGTCCCAAACTCAAGGGGACTTT...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp TACTCTGTCTTACACTGCAGGGTGAGGAGGTGCTGCTaGCTAGACAGGACAGCCTCATTTCTCTTTTTGGTG +
Preference number: 3 (lower is better)
Translates to: YSVLHCRVRRCC*LDRTASFLFLV
Trigger: CACCAAAAAGAGAAATGAGGCTGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp GTCTACTCTGTCTTACACTGCAGGGTGAGGAGGTGCTaGTGCCTAGACAGGACAGCCTCATTTCTCTTTTTG +
Preference number: 3 (lower is better)
Translates to: VYSVLHCRVRRC*CLDRTASFLFL
Trigger: CAAAAAGAGAAATGAGGCTGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp CAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTaGTGGTCTTGTCACTGGTGTGCTGTGACAACTGTC +
Preference number: 3 (lower is better)
Translates to: QETPSLICCSFL*WSCHWCAVTTV
Trigger: GACAGTTGTCACAGCACACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CCA 72 bp GTAGGAGTTTGTAGGCCGCTGAGTTTCAGGTCTTGTTaGAAAGTGGTGCATCCCTTTGTTCCAGCTGAAGTC +
Preference number: 3 (lower is better)
Translates to: VGVCRPLSFRSC*KVVHPFVPAEV
Trigger: GACTTCAGCTGGAACAAAGGGATGCACCACTTTCCAACAAGACCTGAAACTCAGCGGCCTACAAACTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CAA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGGCCTCATTTCTCTTTTaGGTGTTGACCTGCTTAAGA +
Preference number: 3 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPASFLF*VLTCLR
Trigger: TCTTAAGCAGGTCAACACCAAAAAGAGAAATGAGGC...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp CTGTGGCACCTTCCATTTCCTAGAAACACTGAAGCATaGCTGACTGGACTTGATCAAGATGCTAGCGAAGAC +
Preference number: 3 (lower is better)
Translates to: LWHLPFPRNTEA*LTGLDQDASED
Trigger: GTCTTCGCTAGCATCTTGATCAAGTCCAGTCAGGCATGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CAA 90 bp GTCTGCAATCAGAAGCTGCTGATCGGAATCAAGACTTACGATGCATTACCATCACTGTCCATTTCACAGTaGAGTCACAGTGAACCCCCG +
Preference number: 3 (lower is better)
Translates to: VCNQKLLIGIKTYDALPSLSISQ*SHSEPP
Trigger: CGGGGGTTCACTGTGACTCAACTGTGAAATGGACAG...TGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR-3UTR CAA 90 bp GTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCTTTCTCTTTTTGGTGTaGACCTGCTTAAGAAATACC +
Preference number: 3 (lower is better)
Translates to: VLGHQQETPSLICCSFLCFLFLV*TCLRNT
Trigger: GGTATTTCTTAAGCAGGTCAACACCAAAAAGAGAAA...GCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR TCA 72 bp CATTTGTACTCTGAAGGGGCAGTGCTTTTAGCAGAGTaGGCCACCCTGAAATTCAATCTGGCTTTGTGGTTT +
Preference number: 3 (lower is better)
Translates to: HLYSEGAVLLAE*ATLKFNLALWF
Trigger: AAACCACAAAGCCAGATTGAATTTCAGGGTGGCTCACTCTGCTAAAAGCACTGCCCCTTCAGAGTACAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp AAGAGCTCTAGGCCATTGATGGTGGAATCAAGTGTGTaGAGGAGTGATGAGCTACTTAATATCTGTGGACAG +
Preference number: 3 (lower is better)
Translates to: KSSRPLMVESSV*RSDELLNICGQ
Trigger: CTGTCCACAGATATTAAGTAGCTCATCACTCCTGCACACACTTGATTCCACCATCAATGGCCTAGAGCTCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR GCA 72 bp TCATTCTTGCTCATCTTAGCTTGGCACTCACTATGTTaGTTTAGGCTGGCTCAGAACTTGCAGCAATCTCCT +
Preference number: 3 (lower is better)
Translates to: SFLLILAWHSLC*FRLAQNLQQSP
Trigger: AGGAGATTGCTGCAAGTTCTGAGCCAGCCTAAAGCAACATAGTGAGTGCCAAGCTAAGATGAGCAAGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR TCA 72 bp GGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTaGCACAGATTTCTAAGGGTCTTTAGTCATGCAGTT +
Preference number: 3 (lower is better)
Translates to: GSLKYMRIVTVL*HRFLRVFSHAV
Trigger: AACTGCATGACTAAAGACCCTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CCA 72 bp ATTTGGCTTACAGCAAAAATGACTCTAAGATTTCAGTaGCCTAACTCTAATGTGACAGTGTTCGTTGGTGCT +
Preference number: 3 (lower is better)
Translates to: IWLTAKMTLRFQ*PNSNVTVFVGA
Trigger: AGCACCAACGAACACTGTCACATTAGAGTTAGGCCACTGAAATCTTAGAGTCATTTTTGCTGTAAGCCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp GAGTATCCTCCAGCAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTTCTCTGCAGCCGCCCTaGGGACCCGGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EYPPAANPSSWTPLPMQPSLQPP*GPGLPA
Trigger: AGCTGGAAGGCCGGGTCCGCAGGGCGGCTGCAGAGA...AGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAGGATACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp CAGCTGCCCTCAGTCTACTCTGTCTTACACTGCAGGGTGAGGAGGTGCTGCTGCTCTCTGCAGCCGCCCTaGGGACCCGGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QLPSVYSVLHCRVRRCCCSLQPP*GPGLPA
Trigger: AGCTGGAAGGCCGGGTCCGCAGGGCGGCTGCAGAGA...GCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGACTGAGGGCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp CAGCTGCCCTCAGTCTACTCTGTCTTACACTGCAGGGTGAGGAGGTGCTGCTGCGCCTCCCCCTTCCTCTaGTGCACGCTGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QLPSVYSVLHCRVRRCCCASPFL*CTLLLL
Trigger: CAGGAGCAGCAGCGTGCATCAGAGGAAGGGGGAGGC...GCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGACTGAGGGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp GAGTATCCTCCAGCAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTTACAGCACCTCTCTCTaGAGCCGCCCTGCGGACCCG +
Preference number: 4 (lower is better)
Translates to: EYPPAANPSSWTPLPMQPYSTSL*SRPADP
Trigger: CGGGTCCGCAGGGCGGCTGCAGAGAGAGGTGCTGTA...AGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAGGATACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp CCTCTTGGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCACCGCCTGCCCTTaGATGGATGCCTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PLGHLCPCSLCPERSAGTATACP*MDACWC
Trigger: GCACCAACAGGCATCCATCCAAGGGCAGGCGGTGGC...AGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp GCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGTGAGAGCCTCCCCCTTCCTCTaGTGCACGCTGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AHAAFVQSAVQALPFLVRASPFL*CTLLLL
Trigger: CAGGAGCAGCAGCGTGCATCAGAGGAAGGGGGAGGC...TCTCACTAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp ACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTATCCCGCTCAGGGTACTaGGAGTCCTCCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TSAHAAFVQSAVQALPFLSRSGY*ESSSGL
Trigger: CAGGCCTGAGGAGGACTCTCAGTACCCTGAGCGGGA...TAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp GAGTATCCTCCAGCAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTCCGCCTGCCCTTGGATaGATGCCTGTTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: EYPPAANPSSWTPLPMQPPPALG*MPVGAP
Trigger: AGGAGCACCAACAGGCATCCATCCAAGGGCAGGCGG...AGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAGGATACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp GCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGTGAGAAGTCCTCCTCAGGCCTaGCCAACAGGCCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: AHAAFVQSAVQALPFLVRSPPQA*PTGQLV
Trigger: TACCAGCTGGCCTGTTGGCCAGGCCTGAGGAGGACT...TCTCACTAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp CCTCTTGGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTCCTCGGTCATCTGGCTaGTACACTGGTTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: PLGHLCPCSLCPERSAGTPRSSG*YTGSGH
Trigger: ATGACCTGAACCAGTGTATCAGCCAGATGACCGAGG...AGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp GCGTTACCCAGAGTCTGCAGGTGTAAGCCTCTACTCCCAAGCTCTGAGGCTTGCCTGCCCTTGGATGGATaGCTGTTGGTGCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: ALPRVCRCKPLLPSSEACLPLDG*LLVLLT
Trigger: GGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAG...GCAAGCCTCAGAGCTTGGGAGTAGAGGCTTACACCTGCAGACTCTGGGTAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
CDS-3UTR GCA 90 bp GAGTATCCTCCAGCAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTATTCCCTGCAAGGGCTaGCTGCTTCTCCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: EYPPAANPSSWTPLPMQPIPCKG*LLLPLR
Trigger: TCTGAGAGGGAGAAGCAGGCAGCCCTTGCAGGGAAT...AGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAGGATACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp CCTCTTGGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTTCCAGCTGGAAGCTGTaGCTAGACTGGATCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PLGHLCPCSLCPERSAGTSSWKL*LDWILS
Trigger: TGACAGGATCCAGTCTAGCCACAGCTTCCAGCTGGA...AGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp CCTCTTGGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTTTGGGGGCTGGAATCTaGGACTTGTTTCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: PLGHLCPCSLCPERSAGTLGAGI*DLFLGT
Trigger: TGTGCCCAGAAACAAGTCCCAGATTCCAGCCCCCAA...AGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp GTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCGCCACCGCCTGCCCTTaGATGGATGCCTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: VLGHQQETPSLICCSFLCATACP*MDACWC
Trigger: GCACCAACAGGCATCCATCCAAGGGCAGGCGGTGGC...GCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp CAGCTGCCCTCAGTCTACTCTGTCTTACACTGCAGGGTGAGGAGGTGCTGCTGCTCTCCTGGGTTCTTCTaGCCTCCCCCTTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: QLPSVYSVLHCRVRRCCCSPGFF*PPPSSD
Trigger: ATCAGAGGAAGGGGGAGGCCAGAAGAACCCAGGAGA...GCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGACTGAGGGCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp CAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCTGGATCCTGTCAAGTTaGTCTCTCTGCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QPTLPLGHLCPCSLCPERWILSS*SLCFCS
Trigger: GCTGCAGAAGCAGAGAGAGCAACTTGACAGGATCCA...GCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp CAGCTGCCCTCAGTCTACTCTGTCTTACACTGCAGGGTGAGGAGGTGCTGCTGCCCAAGCTCTCTGAATTaGGGGCTGGAATCTGGGACT +
Preference number: 4 (lower is better)
Translates to: QLPSVYSVLHCRVRRCCCPSSLN*GLESGT
Trigger: AGTCCCAGATTCCAGCCCCCAATTCAGAGAGCTTGG...GCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGACTGAGGGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGCCGCCTGCCCTTGGATaGATGCCTGTTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPPPALG*MPVGAP
Trigger: AGGAGCACCAACAGGCATCCATCCAAGGGCAGGCGG...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGAGTCCTCCTCAGGCCTaGCCAACAGGCCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPSPPQA*PTGQLV
Trigger: TACCAGCTGGCCTGTTGGCCAGGCCTGAGGAGGACT...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp GCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGTGAGACCTGGTGTAGCTTGTTaGCATTCTCCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AHAAFVQSAVQALPFLVRPGVAC*HSPAGS
Trigger: GCTTCCAGCTGGAGAATGTCAACAAGCTACACCAGG...TCTCACTAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp ACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTACCTGGTGTAGCTTGTTaGCATTCTCCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TSAHAAFVQSAVQALPFLPGVAC*HSPAGS
Trigger: GCTTCCAGCTGGAGAATGTCAACAAGCTACACCAGG...TAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp ACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGGTAGCTGTGTGTGCTaGTCGAGTTTCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TSAHAAFVQSAVQALPFLGSCVC*SSFSAP
Trigger: AGGAGCTGAGAAACTCGATCAGCACACACAGCTACC...TAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp GTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCTCTGATGCACGCTGCTaGTCCTGCCTATCCCGGATG +
Preference number: 4 (lower is better)
Translates to: VLGHQQETPSLICCSFLCSDARC*SCLSRM
Trigger: CATCCGGGATAGGCAGGAGCAGCAGCGTGCATCAGA...GCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp CCTCTTGGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTTCTGGGACTTGTTTCTaGGCACATCCCCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PLGHLCPCSLCPERSAGTSGTCF*AHPLSL
Trigger: AAGAGAAAGGGGATGTGCCCAGAAACAAGTCCCAGA...AGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp GCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGTGAGATGGATCCTGTCAAGTTaGTCTCTCTGCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AHAAFVQSAVQALPFLVRWILSS*SLCFCS
Trigger: GCTGCAGAAGCAGAGAGAGCAACTTGACAGGATCCA...TCTCACTAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp GCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGTGAGATTCTGCAGCTCGCCCTaGAACTCATTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: AHAAFVQSAVQALPFLVRFCSSP*NSFFLS
Trigger: GCTCAAGAAGAATGAGTTCCAGGGCGAGCTGCAGAA...TCTCACTAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGTCTCCTGGGTTCTTCTaGCCTCCCCCTTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPSPGFF*PPPSSD
Trigger: ATCAGAGGAAGGGGGAGGCCAGAAGAACCCAGGAGA...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp GCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGTGAGAGCTTCTCGCCTGTGGTaGTGTTATTCACTAAAACCG +
Preference number: 4 (lower is better)
Translates to: AHAAFVQSAVQALPFLVRASRLW*CYSLKP
Trigger: CGGTTTTAGTGAATAACATCACCACAGGCGAGAAGC...TCTCACTAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CAA 72 bp CCCATCCTTGATTTGCTGCTCATTCCTCTGCTGGTCTaGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCG +
Preference number: 4 (lower is better)
Translates to: PILDLLLIPLLV*SLVCCDNCLSP
Trigger: CGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CAA 72 bp TGTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTaGCTGCTCATTCCTCTGCTGGTCTTGTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: CSWPPARDPILD*LLIPLLVLSLV
Trigger: CACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGTGGCATCTGTTCCTCTaGTGGGACTTCTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPWHLFL*WDFFLK
Trigger: CTTCAGGAAGAAGTCCCATCAGAGGAACAGATGCCA...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp TCTAGTGCTGCTGCTTCCTATTTAGCCAGCACTTCAGAGTCAGATCAGCCACTCATTCCCTGCAAGGGCTaGCTGCTTCTCCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSAAASYLASTSESDQPLIPCKG*LLLPLR
Trigger: TCTGAGAGGGAGAAGCAGGCAGCCCTTGCAGGGAAT...GAGTGGCTGATCTGACTCTGAAGTGCTGGCTAAATAGGAAGCAGCAGCACTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp GCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTAGTGAGATGGTTCTTCTGGAATTaGAAGATATCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AHAAFVQSAVQALPFLVRWFFWN*KISCCR
Trigger: CCTGCAGCAGGATATCTTCCAATTCCAGAAGAACCA...TCTCACTAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp ACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCAGTGCAGGCACTGCCTTTCTTATGGTTCTTCTGGAATTaGAAGATATCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TSAHAAFVQSAVQALPFLWFFWN*KISCCR
Trigger: CCTGCAGCAGGATATCTTCCAATTCCAGAAGAACCA...TAAGAAAGGCAGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp GTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCGCTGATGTTGGTTGTTaGTTTCAGCCAGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VLGHQQETPSLICCSFLCADVGC*FQPGLW
Trigger: CCAGAGACCTGGCTGAAACCAACAACCAACATCAGC...GCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGTACAGCACCTCTCTCTaGAGCCGCCCTGCGGACCCG +
Preference number: 4 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKYSTSL*SRPADP
Trigger: CGGGTCCGCAGGGCGGCTGCAGAGAGAGGTGCTGTA...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp GTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTGTAACTCCTCTGCAGTaGCTTCAACTGGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VLSLVCCDNCLSPWGFPFVTPLQ*LQLVLQ
Trigger: CTGCAAGACCAGTTGAAGGCACTGCAGAGGAGTTAC...AAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp GTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCTTGGTTTCCTCATTCTaGACCTGTGGCTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: VLGHQQETPSLICCSFLCLVSSF*TCGFKP
Trigger: GGGTTTGAAGCCACAGGTGCAGAATGAGGAAACCAA...GCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp TCTAGTGCTGCTGCTTCCTATTTAGCCAGCACTTCAGAGTCAGATCAGCCACTCTCCTCACCGACAGCCTaGATCTCATTGGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSAAASYLASTSESDQPLSSPTA*ISLVSS
Trigger: TGAGGAAACCAATGAGATTCAGGCTGTCGGTGAGGA...GAGTGGCTGATCTGACTCTGAAGTGCTGGCTAAATAGGAAGCAGCAGCACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGTCCCGCTCAGGGTACTaGGAGTCCTCCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKSRSGY*ESSSGL
Trigger: CAGGCCTGAGGAGGACTCTCAGTACCCTGAGCGGGA...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp GTCTGCAATCAGAAGCTGCTGATCGGAATCAAGACTTACGATGCATTACCATCAGCGGAGACTTCATGCTaGGACGCCCATTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: VCNQKLLIGIKTYDALPSAETSC*DAHSPI
Trigger: GATTGGGGAATGGGCGTCGCAGCATGAAGTCTCCGC...TGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp CTCAGCTATGTACTATGTTTGAGGCCCACCTTGGCTACACGAGATTGTGTCTTATCAAGTTGCTCTCTCTaGTTCTGCAGCTCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSYVLCLRPTLATRDCVLSSCSL*FCSSPW
Trigger: CCAGGGCGAGCTGCAGAAGCAGAGAGAGCAACTTGA...TAAGACACAATCTCGTGTAGCCAAGGTGGGCCTCAAACATAGTACATAGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
CDS-3UTR GCA 90 bp GTCTGCAATCAGAAGCTGCTGATCGGAATCAAGACTTACGATGCATTACCATCACTGCCCTTGGATGGATaGCTGTTGGTGCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: VCNQKLLIGIKTYDALPSLPLDG*LLVLLT
Trigger: GGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAG...TGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp TCTAGTGCTGCTGCTTCCTATTTAGCCAGCACTTCAGAGTCAGATCAGCCACTCCTCATTCTGCACCTGTaGCTTCAAACCCAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSAAASYLASTSESDQPLLILHL*LQTQAL
Trigger: GAGAGCTTGGGTTTGAAGCCACAGGTGCAGAATGAG...GAGTGGCTGATCTGACTCTGAAGTGCTGGCTAAATAGGAAGCAGCAGCACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp TTTGAGGCCCACCTTGGCTACACGAGATTGTGTCTTAAACACCAAACAACCCTAGGTAGCTGTGTGTGCTaGTCGAGTTTCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FEAHLGYTRLCLKHQTTLGSCVC*SSFSAP
Trigger: AGGAGCTGAGAAACTCGATCAGCACACACAGCTACC...TAGGGTTGTTTGGTGTTTAAGACACAATCTCGTGTAGCCAAGGTGGGCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
CDS-3UTR GCA 90 bp TGGTGGAATCAAGTGTGTGCAGGAGTGATGAGCTACTTAATATCTGTGGACAGATCAAGTTGCTCTCTCTaGTTCTGCAGCTCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WWNQVCAGVMSYLISVDRSSCSL*FCSSPW
Trigger: CCAGGGCGAGCTGCAGAAGCAGAGAGAGCAACTTGA...TCTGTCCACAGATATTAAGTAGCTCATCACTCCTGCACACACTTGATTCCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp TTTGAGGCCCACCTTGGCTACACGAGATTGTGTCTTAAACACCAAACAACCCTATATCCTGCTGCAGGCTaGTGTAACTCCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: FEAHLGYTRLCLKHQTTLYPAAG*CNSSAV
Trigger: CACTGCAGAGGAGTTACAGCAGCCTGCAGCAGGATA...TAGGGTTGTTTGGTGTTTAAGACACAATCTCGTGTAGCCAAGGTGGGCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
CDS-3UTR GCA 90 bp TCTAGTGCTGCTGCTTCCTATTTAGCCAGCACTTCAGAGTCAGATCAGCCACTCTTGGTTTCCTCATTCTaGACCTGTGGCTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: SSAAASYLASTSESDQPLLVSSF*TCGFKP
Trigger: GGGTTTGAAGCCACAGGTGCAGAATGAGGAAACCAA...GAGTGGCTGATCTGACTCTGAAGTGCTGGCTAAATAGGAAGCAGCAGCACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp AGTTACCCTCAGCTATGTACTATGTTTGAGGCCCACCTTGGCTACACGAGATTGTTGACATTCTCCAGCTaGAAGCTGTGGCTAGACTGG +
Preference number: 4 (lower is better)
Translates to: SYPQLCTMFEAHLGYTRLLTFSS*KLWLDW
Trigger: CCAGTCTAGCCACAGCTTCCAGCTGGAGAATGTCAA...CAATCTCGTGTAGCCAAGGTGGGCCTCAAACATAGTACATAGCTGAGGGTAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
CDS-3UTR CCA 90 bp GAAACAACCCACGTCTGCCATAGGGGTTTAAATGTGTGCTTTAAAGAGGCACAGCCAAGCTCTCTGAATTaGGGGCTGGAATCTGGGACT +
Preference number: 4 (lower is better)
Translates to: ETTHVCHRGLNVCFKEAQPSSLN*GLESGT
Trigger: AGTCCCAGATTCCAGCCCCCAATTCAGAGAGCTTGG...CTGTGCCTCTTTAAAGCACACATTTAAACCCCTATGGCAGACGTGGGTTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CAA 72 bp AGTGGTGTTTATGCTGACGGTAAGAGCTCTAGGCCATaGATGGTGGAATCAAGTGTGTGCAGGAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: SGVYADGKSSRP*MVESSVCRSDE
Trigger: CTCATCACTCCTGCACACACTTGATTCCACCATCAATGGCCTAGAGCTCTTACCGTCAGCATAAACACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR GCA 90 bp CTCAGCTATGTACTATGTTTGAGGCCCACCTTGGCTACACGAGATTGTGTCTTAGTAACTCCTCTGCAGTaGCTTCAACTGGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LSYVLCLRPTLATRDCVLVTPLQ*LQLVLQ
Trigger: CTGCAAGACCAGTTGAAGGCACTGCAGAGGAGTTAC...TAAGACACAATCTCGTGTAGCCAAGGTGGGCCTCAAACATAGTACATAGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
CDS-3UTR GCA 90 bp GTCTGCAATCAGAAGCTGCTGATCGGAATCAAGACTTACGATGCATTACCATCATATCCTGCTGCAGGCTaGTGTAACTCCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VCNQKLLIGIKTYDALPSYPAAG*CNSSAV
Trigger: CACTGCAGAGGAGTTACAGCAGCCTGCAGCAGGATA...TGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp GTCTGCAATCAGAAGCTGCTGATCGGAATCAAGACTTACGATGCATTACCATCATCCAGCTGGAAGCTGTaGCTAGACTGGATCCTGTCA +
Preference number: 4 (lower is better)
Translates to: VCNQKLLIGIKTYDALPSSSWKL*LDWILS
Trigger: TGACAGGATCCAGTCTAGCCACAGCTTCCAGCTGGA...TGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp TCTAGTGCTGCTGCTTCCTATTTAGCCAGCACTTCAGAGTCAGATCAGCCACTCCAGCCTGAATCTCATTaGTTTCCTCATTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SSAAASYLASTSESDQPLQPESH*FPHSAP
Trigger: AGGTGCAGAATGAGGAAACCAATGAGATTCAGGCTG...GAGTGGCTGATCTGACTCTGAAGTGCTGGCTAAATAGGAAGCAGCAGCACTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp GAAACAACCCACGTCTGCCATAGGGGTTTAAATGTGTGCTTTAAAGAGGCACAGGCTTCTCGCCTGTGGTaGTGTTATTCACTAAAACCG +
Preference number: 4 (lower is better)
Translates to: ETTHVCHRGLNVCFKEAQASRLW*CYSLKP
Trigger: CGGTTTTAGTGAATAACATCACCACAGGCGAGAAGC...CTGTGCCTCTTTAAAGCACACATTTAAACCCCTATGGCAGACGTGGGTTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp TGGTGGAATCAAGTGTGTGCAGGAGTGATGAGCTACTTAATATCTGTGGACAGATGGCATCTGTTCCTCTaGTGGGACTTCTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: WWNQVCAGVMSYLISVDRWHLFL*WDFFLK
Trigger: CTTCAGGAAGAAGTCCCATCAGAGGAACAGATGCCA...TCTGTCCACAGATATTAAGTAGCTCATCACTCCTGCACACACTTGATTCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp GTCTGCAATCAGAAGCTGCTGATCGGAATCAAGACTTACGATGCATTACCATCATCCTCACCGACAGCCTaGATCTCATTGGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VCNQKLLIGIKTYDALPSSSPTA*ISLVSS
Trigger: TGAGGAAACCAATGAGATTCAGGCTGTCGGTGAGGA...TGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp GCTGTTTTAAAGTGGTTTATTGTACTCCATGGGGTAACTGGGCTGGAATGCATTTTGGGGGCTGGAATCTaGGACTTGTTTCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: AVLKWFIVLHGVTGLECILGAGI*DLFLGT
Trigger: TGTGCCCAGAAACAAGTCCCAGATTCCAGCCCCCAA...AATGCATTCCAGCCCAGTTACCCCATGGAGTACAATAAACCACTTTAAAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
CDS-3UTR TCA 90 bp TTTGAGGCCCACCTTGGCTACACGAGATTGTGTCTTAAACACCAAACAACCCTAATTATGCCTCTCTTCTaGGCGTCAGCATTAAGAACA +
Preference number: 4 (lower is better)
Translates to: FEAHLGYTRLCLKHQTTLIMPLF*ASALRT
Trigger: TGTTCTTAATGCTGACGCTCAGAAGAGAGGCATAAT...TAGGGTTGTTTGGTGTTTAAGACACAATCTCGTGTAGCCAAGGTGGGCCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
CDS-3UTR CCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGCTCATTCTGCACCTGTaGCTTCAAACCCAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKLILHL*LQTQAL
Trigger: GAGAGCTTGGGTTTGAAGCCACAGGTGCAGAATGAG...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR TCA 90 bp TGGTGGAATCAAGTGTGTGCAGGAGTGATGAGCTACTTAATATCTGTGGACAGAATTATGCCTCTCTTCTaGGCGTCAGCATTAAGAACA +
Preference number: 4 (lower is better)
Translates to: WWNQVCAGVMSYLISVDRIMPLF*ASALRT
Trigger: TGTTCTTAATGCTGACGCTCAGAAGAGAGGCATAAT...TCTGTCCACAGATATTAAGTAGCTCATCACTCCTGCACACACTTGATTCCACCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp TTTCAAACAGTATATAAACTTGGGAAAAACAGCTCGTGTTGCTCTTGCCTTCGTTTCTGCAGCTCGCCCTaGAACTCATTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: FQTVYKLGKNSSCCSCLRFCSSP*NSFFLS
Trigger: GCTCAAGAAGAATGAGTTCCAGGGCGAGCTGCAGAA...ACGAAGGCAAGAGCAACACGAGCTGTTTTTCCCAAGTTTATATACTGTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp AGGATCGCTAAAGTACATGAGGATTGTGACTGTGTTGTGACACAGATTTCTAAGTCTGGGACTTGTTTCTaGGCACATCCCCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RIAKVHEDCDCVVTQISKSGTCF*AHPLSL
Trigger: AAGAGAAAGGGGATGTGCCCAGAAACAAGTCCCAGA...CTTAGAAATCTGTGTCACAACACAGTCACAATCCTCATGTACTTTAGCGATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CAA 72 bp ACCCAAAGGGTAGAATGTGGCCCTTACCTATTGTACTaGTTAAAAAGGAAATCAGCACAGCCTGTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: TQRVECGPYLLY*LKRKSAQPVSN
Trigger: ATTGCTGACAGGCTGTGCTGATTTCCTTTTTAACAAGTACAATAGGTAAGGGCCACATTCTACCCTTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CAA 72 bp CTTAGAACCCAAAGGGTAGAATGTGGCCCTTACCTATaGTACTTGTTAAAAAGGAAATCAGCACAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LRTQRVECGPYL*YLLKRKSAQPV
Trigger: GACAGGCTGTGCTGATTTCCTTTTTAACAAGTACAATAGGTAAGGGCCACATTCTACCCTTTGGGTTCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
3UTR CAA 72 bp TGTACTATGTTTGAGGCCCACCTTGGCTACACGAGATaGTGTCTTAAACACCAAACAACCCTAAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: CTMFEAHLGYTR*CLKHQTTLKLE
Trigger: TTCAAGTTTTAGGGTTGTTTGGTGTTTAAGACACAATCTCGTGTAGCCAAGGTGGGCCTCAAACATAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
CDS-3UTR GCA 90 bp TTTCAAACAGTATATAAACTTGGGAAAAACAGCTCGTGTTGCTCTTGCCTTCGTCTCCCTCTCAGATTCTaGTTCGTTTTCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: FQTVYKLGKNSSCCSCLRLPLRF*FVFIHV
Trigger: GACATGGATGAAAACGAAGCAGAATCTGAGAGGGAG...ACGAAGGCAAGAGCAACACGAGCTGTTTTTCCCAAGTTTATATACTGTTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CCA 90 bp TTTCAAACAGTATATAAACTTGGGAAAAACAGCTCGTGTTGCTCTTGCCTTCGTCAGCCTGAATCTCATTaGTTTCCTCATTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: FQTVYKLGKNSSCCSCLRQPESH*FPHSAP
Trigger: AGGTGCAGAATGAGGAAACCAATGAGATTCAGGCTG...ACGAAGGCAAGAGCAACACGAGCTGTTTTTCCCAAGTTTATATACTGTTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 90 bp TCCTCCTCAGGCCTGGCCAACAGGCCAGCTGGTAGCTGTGTGTGCTaGTCGAGTTTCTCAGCTCCTACCCGAGTGCCATCCGCCACCGCC +
Preference number: 5 (lower is better)
Translates to: SSSGLANRPAGSCVC*SSFSAPTRVPSATA
Trigger: GGCGGTGGCGGATGGCACTCGGGTAGGAGCTGAGAAACTCGATCAGCACACACAGCTACCAGCTGGCCTGTTGGCCAGGCCTGAGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 90 bp GTTGCTCTCTCTGCTTCTGCAGCTCGCCCTGGAACTCATTCTTCTTaGGCTCTACAGCACCTCTCTCTGCAGCCGCCCTGCGGACCCGGC +
Preference number: 5 (lower is better)
Translates to: VALSASAARPGTHSS*ALQHLSLQPPCGPG
Trigger: GCCGGGTCCGCAGGGCGGCTGCAGAGAGAGGTGCTGTAGAGCTCAAGAAGAATGAGTTCCAGGGCGAGCTGCAGAAGCAGAGAGAGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS GCA 90 bp AGCTCCTACCCGAGTGCCATCCGCCACCGCCTGCCCTTGGATGGATaGCTGTTGGTGCTCCTCACCGACAGCCTGAATCTCATTGGTTTC +
Preference number: 5 (lower is better)
Translates to: SSYPSAIRHRLPLDG*LLVLLTDSLNLIGF
Trigger: GAAACCAATGAGATTCAGGCTGTCGGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAGGCGGTGGCGGATGGCACTCGGGTAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp CAGCTGCCCTCAGTCTACTCTGTCTTACACTGCAGGGTGAGGAGGTGCTGCTGCGAGGGCCTGCTGATGTaGGTTGTTGGTTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: QLPSVYSVLHCRVRRCCCEGLLM*VVGFSQ
Trigger: CTGGCTGAAACCAACAACCAACATCAGCAGGCCCTC...GCAGCAGCACCTCCTCACCCTGCAGTGTAAGACAGAGTAGACTGAGGGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 90 bp GCCTGCCCTTGGATGGATGCCTGTTGGTGCTCCTCACCGACAGCCTaGATCTCATTGGTTTCCTCATTCTGCACCTGTGGCTTCAAACCC +
Preference number: 5 (lower is better)
Translates to: ACPWMDACWCSSPTA*ISLVSSFCTCGFKP
Trigger: GGGTTTGAAGCCACAGGTGCAGAATGAGGAAACCAATGAGATTCAGGCTGTCGGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp CAGCCAACCCTTCCTCTTGGACACCTCTGCCCATGCAGCCTTTGTCCAGAGCGCCTGGTTCTTCTGGAATaGGAAGATATCCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: QPTLPLGHLCPCSLCPERLVLLE*EDILLQ
Trigger: CTGCAGCAGGATATCTTCCAATTCCAGAAGAACCAG...GCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGTTGGATGGATGCCTGTaGGTGCTCCTCACCGACAGC +
Preference number: 5 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPLDGCL*VLLTDS
Trigger: GCTGTCGGTGAGGAGCACCAACAGGCATCCATCCAA...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 90 bp TCTGTTCCTCTGATGGGACTTCTTCCTGAAGCTTGGGCTGAGGCTTaGGGGCCTGCTGATGTTGGTTGTTGGTTTCAGCCAGGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SVPLMGLLPEAWAEA*GPADVGCWFQPGLW
Trigger: CCAGAGACCTGGCTGAAACCAACAACCAACATCAGCAGGCCCTCAAGCCTCAGCCCAAGCTTCAGGAAGAAGTCCCATCAGAGGAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CCA 90 bp GACTGGATCCTGTCAAGTTGCTCTCTCTGCTTCTGCAGCTCGCCCTaGAACTCATTCTTCTTGAGCTCTACAGCACCTCTCTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: DWILSSCSLCFCSSP*NSFFLSSTAPLSAA
Trigger: GGCTGCAGAGAGAGGTGCTGTAGAGCTCAAGAAGAATGAGTTCCAGGGCGAGCTGCAGAAGCAGAGAGAGCAACTTGACAGGATCCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp ACCACATCACACTGCAGTGTCTGCTGCTGGTATCAGGTAGGAGTTTGTAGGCCGGAGGGCCTGCTGATGTaGGTTGTTGGTTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: TTSHCSVCCWYQVGVCRPEGLLM*VVGFSQ
Trigger: CTGGCTGAAACCAACAACCAACATCAGCAGGCCCTC...CGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAGTGTGATGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp GTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCGCTGGAATCTGGGACTaGTTTCTGGGCACATCCCCT +
Preference number: 5 (lower is better)
Translates to: VLGHQQETPSLICCSFLCAGIWD*FLGTSP
Trigger: AGGGGATGTGCCCAGAAACAAGTCCCAGATTCCAGC...GCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp GTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTTTGGATGGATGCCTGTaGGTGCTCCTCACCGACAGC +
Preference number: 5 (lower is better)
Translates to: VLSLVCCDNCLSPWGFPFLDGCL*VLLTDS
Trigger: GCTGTCGGTGAGGAGCACCAACAGGCATCCATCCAA...AAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS GCA 90 bp CTGCTGATGTTGGTTGTTGGTTTCAGCCAGGTCTCTGGAACCCGGTaGTTCGTTTCGCTTTCTGATGACCTCCTCTATCCGCTCGTCACA +
Preference number: 5 (lower is better)
Translates to: LLMLVVGFSQVSGTR*FVSLSDDLLYPLVT
Trigger: TGTGACGAGCGGATAGAGGAGGTCATCAGAAAGCGAAACGAAGCACCGGGTTCCAGAGACCTGGCTGAAACCAACAACCAACATCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CCA 90 bp AACCCAAGCTCTCTGAATTGGGGGCTGGAATCTGGGACTTGTTTCTaGGCACATCCCCTTTCTCTTGTGGCATCTGTTCCTCTGATGGGA +
Preference number: 5 (lower is better)
Translates to: NPSSLNWGLESGTCF*AHPLSLVASVPLMG
Trigger: TCCCATCAGAGGAACAGATGCCACAAGAGAAAGGGGATGTGCCCAGAAACAAGTCCCAGATTCCAGCCCCCAATTCAGAGAGCTTGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp GTTCTTGGCCACCAGCAAGAGACCCCATCCTTGATTTGCTGCTCATTCCTCTGCTCATCCTGGTGTAGCTaGTTGACATTCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VLGHQQETPSLICCSFLCSSWCS*LTFSSW
Trigger: CCAGCTGGAGAATGTCAACAAGCTACACCAGGATGA...GCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCCAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CCA 90 bp TTTCCTCATTCTGCACCTGTGGCTTCAAACCCAAGCTCTCTGAATTaGGGGCTGGAATCTGGGACTTGTTTCTGGGCACATCCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: FPHSAPVASNPSSLN*GLESGTCFWAHPLS
Trigger: AGAAAGGGGATGTGCCCAGAAACAAGTCCCAGATTCCAGCCCCCAATTCAGAGAGCTTGGGTTTGAAGCCACAGGTGCAGAATGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp AGTTACCCTCAGCTATGTACTATGTTTGAGGCCCACCTTGGCTACACGAGATTGGCTGGAATCTGGGACTaGTTTCTGGGCACATCCCCT +
Preference number: 5 (lower is better)
Translates to: SYPQLCTMFEAHLGYTRLAGIWD*FLGTSP
Trigger: AGGGGATGTGCCCAGAAACAAGTCCCAGATTCCAGC...CAATCTCGTGTAGCCAAGGTGGGCCTCAAACATAGTACATAGCTGAGGGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022039.7
CDS GCA 90 bp TCTGTCATTCCCTGCAAGGGCTGCCTGCTTCTCCCTCTCAGATTCTaGTTCGTTTTCATCCATGTCGTATTCATCTCCTGGGTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: SVIPCKGCLLLPLRF*FVFIHVVFISWVLL
Trigger: CAGAAGAACCCAGGAGATGAATACGACATGGATGAAAACGAAGCAGAATCTGAGAGGGAGAAGCAGGCAGCCCTTGCAGGGAATGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp GTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTTGGAACTCATTCTTCTaGAGCTCTACAGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: VLSLVCCDNCLSPWGFPFWNSFF*SSTAPL
Trigger: GAGAGGTGCTGTAGAGCTCAAGAAGAATGAGTTCCA...AAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp GTCTTGTCACTGGTGTGCTGTGACAACTGTCTAAGCCCGTGGGGTTTCCCATTTCTGGTTCTTCTGGAATaGGAAGATATCCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VLSLVCCDNCLSPWGFPFLVLLE*EDILLQ
Trigger: CTGCAGCAGGATATCTTCCAATTCCAGAAGAACCAG...AAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCACACCAGTGACAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp GTCTGCAATCAGAAGCTGCTGATCGGAATCAAGACTTACGATGCATTACCATCATCCTGGTGTAGCTTGTaGACATTCTCCAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: VCNQKLLIGIKTYDALPSSWCSL*TFSSWK
Trigger: CTTCCAGCTGGAGAATGTCAACAAGCTACACCAGGA...TGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp GTCTGCAATCAGAAGCTGCTGATCGGAATCAAGACTTACGATGCATTACCATCATCATCCTGGTGTAGCTaGTTGACATTCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VCNQKLLIGIKTYDALPSSSWCS*LTFSSW
Trigger: CCAGCTGGAGAATGTCAACAAGCTACACCAGGATGA...TGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS-3UTR CAA 90 bp GTCTGCAATCAGAAGCTGCTGATCGGAATCAAGACTTACGATGCATTACCATCATGGAACTCATTCTTCTaGAGCTCTACAGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: VCNQKLLIGIKTYDALPSWNSFF*SSTAPL
Trigger: GAGAGGTGCTGTAGAGCTCAAGAAGAATGAGTTCCA...TGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 90 bp CTCTGCCTTTCACTCCCGACGGGCACATTTATTATGCCTCTCTTCTaGGCGTCAGCATTAAGAACATTTATATTTCTGTCATTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LCLSLPTGTFIMPLF*ASALRTFIFLSFPA
Trigger: TGCAGGGAATGACAGAAATATAAATGTTCTTAATGCTGACGCTCAGAAGAGAGGCATAATAAATGTGCCCGTCGGGAGTGAAAGGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS GCA 90 bp GCATTAAGAACATTTATATTTCTGTCATTCCCTGCAAGGGCTGCCTaGTTCTCCCTCTCAGATTCTGCTTCGTTTTCATCCATGTCGTAT +
Preference number: 5 (lower is better)
Translates to: ALRTFIFLSFPARAA*FSLSDSASFSSMSY
Trigger: ATACGACATGGATGAAAACGAAGCAGAATCTGAGAGGGAGAAGCAGGCAGCCCTTGCAGGGAATGACAGAAATATAAATGTTCTTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CCA 72 bp GCTCCTACCCGAGTGCCATCCGCCACCGCCTGCCCTTaGATGGATGCCTGTTGGTGCTCCTCACCGACAGCC +
Preference number: 6 (lower is better)
Translates to: APTRVPSATACP*MDACWCSSPTA
Trigger: GGCTGTCGGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAGGCGGTGGCGGATGGCACTCGGGTAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CAA 72 bp AGCTCCTACCCGAGTGCCATCCGCCACCGCCTGCCCTaGGATGGATGCCTGTTGGTGCTCCTCACCGACAGC +
Preference number: 6 (lower is better)
Translates to: SSYPSAIRHRLP*DGCLLVLLTDS
Trigger: GCTGTCGGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAGGCGGTGGCGGATGGCACTCGGGTAGGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS GCA 72 bp CCGAGTGCCATCCGCCACCGCCTGCCCTTGGATGGATaGCTGTTGGTGCTCCTCACCGACAGCCTGAATCTC +
Preference number: 6 (lower is better)
Translates to: PSAIRHRLPLDG*LLVLLTDSLNL
Trigger: GAGATTCAGGCTGTCGGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAGGCGGTGGCGGATGGCACTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS GCA 72 bp TTCTCAGCTCCTACCCGAGTGCCATCCGCCACCGCCTaGCCTTGGATGGATGCCTGTTGGTGCTCCTCACCG +
Preference number: 6 (lower is better)
Translates to: FSAPTRVPSATA*PWMDACWCSSP
Trigger: CGGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAGGCGGTGGCGGATGGCACTCGGGTAGGAGCTGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS GCA 72 bp TTCTTCTGGCCTCCCCCTTCCTCTGATGCACGCTGCTaGTCCTGCCTATCCCGGATGACAAGCTGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: FFWPPPSSDARC*SCLSRMTSCSR
Trigger: GCGGGAGCAGCTTGTCATCCGGGATAGGCAGGAGCAGCAGCGTGCATCAGAGGAAGGGGGAGGCCAGAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CCA 72 bp GCTCCCGCTCAGGGTACTGAGAGTCCTCCTCAGGCCTaGCCAACAGGCCAGCTGGTAGCTGTGTGTGCTGAT +
Preference number: 6 (lower is better)
Translates to: APAQGTESPPQA*PTGQLVAVCAD
Trigger: ATCAGCACACACAGCTACCAGCTGGCCTGTTGGCCAGGCCTGAGGAGGACTCTCAGTACCCTGAGCGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 72 bp GGCCTGGCCAACAGGCCAGCTGGTAGCTGTGTGTGCTaGTCGAGTTTCTCAGCTCCTACCCGAGTGCCATCC +
Preference number: 6 (lower is better)
Translates to: GLANRPAGSCVC*SSFSAPTRVPS
Trigger: GGATGGCACTCGGGTAGGAGCTGAGAAACTCGATCAGCACACACAGCTACCAGCTGGCCTGTTGGCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 72 bp CCTCTGATGCACGCTGCTGCTCCTGCCTATCCCGGATaGCAAGCTGCTCCCGCTCAGGGTACTGAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: PLMHAAAPAYPG*QAAPAQGTESP
Trigger: AGGACTCTCAGTACCCTGAGCGGGAGCAGCTTGTCATCCGGGATAGGCAGGAGCAGCAGCGTGCATCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CAA 90 bp AGTTGCTCTCTCTGCTTCTGCAGCTCGCCCTGGAACTCATTCTTCTaGAGCTCTACAGCACCTCTCTCTGCAGCCGCCCTGCGGACCCGG +
Preference number: 6 (lower is better)
Translates to: SCSLCFCSSPWNSFF*SSTAPLSAAALRTR
Trigger: CCGGGTCCGCAGGGCGGCTGCAGAGAGAGGTGCTGTAGAGCTCAAGAAGAATGAGTTCCAGGGCGAGCTGCAGAAGCAGAGAGAGCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CAA 90 bp TACCCGAGTGCCATCCGCCACCGCCTGCCCTTGGATGGATGCCTGTaGGTGCTCCTCACCGACAGCCTGAATCTCATTGGTTTCCTCATT +
Preference number: 6 (lower is better)
Translates to: YPSAIRHRLPLDGCL*VLLTDSLNLIGFLI
Trigger: AATGAGGAAACCAATGAGATTCAGGCTGTCGGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAGGCGGTGGCGGATGGCACTCGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CAA 72 bp CTCTGCTTCTGCAGCTCGCCCTGGAACTCATTCTTCTaGAGCTCTACAGCACCTCTCTCTGCAGCCGCCCTG +
Preference number: 6 (lower is better)
Translates to: LCFCSSPWNSFF*SSTAPLSAAAL
Trigger: CAGGGCGGCTGCAGAGAGAGGTGCTGTAGAGCTCAAGAAGAATGAGTTCCAGGGCGAGCTGCAGAAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CAA 72 bp CTGAAGCTTGGGCTGAGGCTTGAGGGCCTGCTGATGTaGGTTGTTGGTTTCAGCCAGGTCTCTGGAACCCGG +
Preference number: 6 (lower is better)
Translates to: LKLGLRLEGLLM*VVGFSQVSGTR
Trigger: CCGGGTTCCAGAGACCTGGCTGAAACCAACAACCAACATCAGCAGGCCCTCAAGCCTCAGCCCAAGCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 72 bp CTGATGGGACTTCTTCCTGAAGCTTGGGCTGAGGCTTaGGGGCCTGCTGATGTTGGTTGTTGGTTTCAGCCA +
Preference number: 6 (lower is better)
Translates to: LMGLLPEAWAEA*GPADVGCWFQP
Trigger: TGGCTGAAACCAACAACCAACATCAGCAGGCCCTCAAGCCTCAGCCCAAGCTTCAGGAAGAAGTCCCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 72 bp TGGATGGATGCCTGTTGGTGCTCCTCACCGACAGCCTaGATCTCATTGGTTTCCTCATTCTGCACCTGTGGC +
Preference number: 6 (lower is better)
Translates to: WMDACWCSSPTA*ISLVSSFCTCG
Trigger: GCCACAGGTGCAGAATGAGGAAACCAATGAGATTCAGGCTGTCGGTGAGGAGCACCAACAGGCATCCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CAA 72 bp CCCAAGCTCTCTGAATTGGGGGCTGGAATCTGGGACTaGTTTCTGGGCACATCCCCTTTCTCTTGTGGCATC +
Preference number: 6 (lower is better)
Translates to: PKLSELGAGIWD*FLGTSPFSCGI
Trigger: GATGCCACAAGAGAAAGGGGATGTGCCCAGAAACAAGTCCCAGATTCCAGCCCCCAATTCAGAGAGCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS GCA 72 bp TTGGTTGTTGGTTTCAGCCAGGTCTCTGGAACCCGGTaGTTCGTTTCGCTTTCTGATGACCTCCTCTATCCG +
Preference number: 6 (lower is better)
Translates to: LVVGFSQVSGTR*FVSLSDDLLYP
Trigger: CGGATAGAGGAGGTCATCAGAAAGCGAAACGAAGCACCGGGTTCCAGAGACCTGGCTGAAACCAACAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CCA 72 bp CTGTCAAGTTGCTCTCTCTGCTTCTGCAGCTCGCCCTaGAACTCATTCTTCTTGAGCTCTACAGCACCTCTC +
Preference number: 6 (lower is better)
Translates to: LSSCSLCFCSSP*NSFFLSSTAPL
Trigger: GAGAGGTGCTGTAGAGCTCAAGAAGAATGAGTTCCAGGGCGAGCTGCAGAAGCAGAGAGAGCAACTTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CCA 72 bp TCTGCACCTGTGGCTTCAAACCCAAGCTCTCTGAATTaGGGGCTGGAATCTGGGACTTGTTTCTGGGCACAT +
Preference number: 6 (lower is better)
Translates to: SAPVASNPSSLN*GLESGTCFWAH
Trigger: ATGTGCCCAGAAACAAGTCCCAGATTCCAGCCCCCAATTCAGAGAGCTTGGGTTTGAAGCCACAGGTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CAA 90 bp GTTTCCTCATTCTGCACCTGTGGCTTCAAACCCAAGCTCTCTGAATaGGGGGCTGGAATCTGGGACTTGTTTCTGGGCACATCCCCTTTC +
Preference number: 6 (lower is better)
Translates to: VSSFCTCGFKPKLSE*GAGIWDLFLGTSPF
Trigger: GAAAGGGGATGTGCCCAGAAACAAGTCCCAGATTCCAGCCCCCAATTCAGAGAGCTTGGGTTTGAAGCCACAGGTGCAGAATGAGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS GCA 72 bp CTAGACTGGATCCTGTCAAGTTGCTCTCTCTGCTTCTaGAGCTCGCCCTGGAACTCATTCTTCTTGAGCTCT +
Preference number: 6 (lower is better)
Translates to: LDWILSSCSLCF*SSPWNSFFLSS
Trigger: AGAGCTCAAGAAGAATGAGTTCCAGGGCGAGCTGCAGAAGCAGAGAGAGCAACTTGACAGGATCCAGTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CCA 72 bp TCTCTGAATTGGGGGCTGGAATCTGGGACTTGTTTCTaGGCACATCCCCTTTCTCTTGTGGCATCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: SLNWGLESGTCF*AHPLSLVASVP
Trigger: AGGAACAGATGCCACAAGAGAAAGGGGATGTGCCCAGAAACAAGTCCCAGATTCCAGCCCCCAATTCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 72 bp GCTCGTCACACTGTTCCTTCACCTCGGTCATCTGGCTaGTACACTGGTTCAGGTCATAGGAGAACTTCTTCT +
Preference number: 6 (lower is better)
Translates to: ARHTVPSPRSSG*YTGSGHRRTSS
Trigger: AGAAGAAGTTCTCCTATGACCTGAACCAGTGTATCAGCCAGATGACCGAGGTGAAGGAACAGTGTGACGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS CCA 72 bp TTCAAACCCAAGCTCTCTGAATTGGGGGCTGGAATCTaGGACTTGTTTCTGGGCACATCCCCTTTCTCTTGT +
Preference number: 6 (lower is better)
Translates to: FKPKLSELGAGI*DLFLGTSPFSC
Trigger: ACAAGAGAAAGGGGATGTGCCCAGAAACAAGTCCCAGATTCCAGCCCCCAATTCAGAGAGCTTGGGTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10
CDS TCA 72 bp TCACTCCCGACGGGCACATTTATTATGCCTCTCTTCTaGGCGTCAGCATTAAGAACATTTATATTTCTGTCA +
Preference number: 6 (lower is better)
Translates to: SLPTGTFIMPLF*ASALRTFIFLS
Trigger: TGACAGAAATATAAATGTTCTTAATGCTGACGCTCAGAAGAGAGGCATAATAAATGTGCCCGTCGGGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022039.7
ENSMUST00000095739.10