Pregenerated sensors for GOLGA7B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042532Ensembl transcript IDs: ENSMUST00000087123.6, ENSMUST00000122375.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGGACAGGGAACAGCGGGCAGGCACCCTCCCTTCCGCACCACATaGCAGGGTGGGCCCAGAGAAAGACTCAGAAGCGGGTGCTCTGGT | + |
|
Preference number: 1 (lower is better) Translates to: WGQGTAGRHPPFRTT*QGGPRERLRSGCSG Trigger: ACCAGAGCACCCGCTTCTGAGTCTTTCTCTGGGCCCACCCTGCCATGTGGTGCGGAAGGGAGGGTGCCTGCCCGCTGTTCCCTGTCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR GCA 90 bp | CCAACCTTCCCAACAGGCTGTGCAAAGTCAGACAGGACGCCTGGCTaGACAGCAGGCTACAGAGGGCACAGGCTTCTGCAGGGGATCGGG | + |
|
Preference number: 1 (lower is better) Translates to: PTFPTGCAKSDRTPG*TAGYRGHRLLQGIG Trigger: CCCGATCCCCTGCAGAAGCCTGTGCCCTCTGTAGCCTGCTGTGCAGCCAGGCGTCCTGTCTGACTTTGCACAGCCTGTTGGGAAGGTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR GCA 90 bp | GCGTCAGGGGCTTGGCCAGCCCTCTCCATCCGCAGCACAGTCTCCTaGTGTAGAGAGACAGGCCCTTTCAGCTCCAGGAAGCTGCTGATA | + |
|
Preference number: 1 (lower is better) Translates to: ASGAWPALSIRSTVS*CRETGPFSSRKLLI Trigger: TATCAGCAGCTTCCTGGAGCTGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGATGGAGAGGGCTGGCCAAGCCCCTGACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CCA 90 bp | GGTCCAGGGTCAGAAAGAAGAAGATCCTGCCAAGGAGCAAAGGTCTaGGGACAGGGAACAGCGGGCAGGCACCCTCCCTTCCGCACCACA | + |
|
Preference number: 1 (lower is better) Translates to: GPGSERRRSCQGAKV*GQGTAGRHPPFRTT Trigger: TGTGGTGCGGAAGGGAGGGTGCCTGCCCGCTGTTCCCTGTCCCCAGACCTTTGCTCCTTGGCAGGATCTTCTTCTTTCTGACCCTGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR TCA 90 bp | AAGCTTCATCTACAAGGGCCTCAGGGTCCTGACACCTGGGCAGGCTaGATATGCAGCATCTGTGGCCCCACTGTGCCATGGGGGCTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: KLHLQGPQGPDTWAG*ICSICGPTVPWGLG Trigger: TCCCAGCCCCCATGGCACAGTGGGGCCACAGATGCTGCATATTCAGCCTGCCCAGGTGTCAGGACCCTGAGGCCCTTGTAGATGAAGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CCA 90 bp | CTTCCCAACCTTCCCAACAGGCTGTGCAAAGTCAGACAGGACGCCTaGCTGCACAGCAGGCTACAGAGGGCACAGGCTTCTGCAGGGGAT | + |
|
Preference number: 1 (lower is better) Translates to: LPNLPNRLCKVRQDA*LHSRLQRAQASAGD Trigger: ATCCCCTGCAGAAGCCTGTGCCCTCTGTAGCCTGCTGTGCAGCCAGGCGTCCTGTCTGACTTTGCACAGCCTGTTGGGAAGGTTGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR TCA 90 bp | ACAGAGGGCCAGGAGGGACTCACAGAGAGGCTCTGCAGACCAATGTaGGACAGGATGGGGCAGGACTCAGTAGTCATTAGCCCAGCAGCC | + |
|
Preference number: 1 (lower is better) Translates to: TEGQEGLTERLCRPM*DRMGQDSVVISPAA Trigger: GGCTGCTGGGCTAATGACTACTGAGTCCTGCCCCATCCTGTCTCACATTGGTCTGCAGAGCCTCTCTGTGAGTCCCTCCTGGCCCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR TCA 90 bp | ATAGTGGCTGGTGATTCCTGTCTAGTTCTAGCACCTCCTGCCCGCTaGGGTAGGCAGCCCCTTTCTGTCCATCTTAAGGCCCCAGGATGC | + |
|
Preference number: 1 (lower is better) Translates to: IVAGDSCLVLAPPAR*GRQPLSVHLKAPGC Trigger: GCATCCTGGGGCCTTAAGATGGACAGAAAGGGGCTGCCTACCTCAGCGGGCAGGAGGTGCTAGAACTAGACAGGAATCACCAGCCACTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR TCA 90 bp | AAGGCCAAGAGGAAGAGCCAAGCTGACAGCCCAGCTTTAGAACATTaGCTTACAGAGGGCCAGGAGGGACTCACAGAGAGGCTCTGCAGA | + |
|
Preference number: 1 (lower is better) Translates to: KAKRKSQADSPALEH*LTEGQEGLTERLCR Trigger: TCTGCAGAGCCTCTCTGTGAGTCCCTCCTGGCCCTCTGTAAGTCAATGTTCTAAAGCTGGGCTGTCAGCTTGGCTCTTCCTCTTGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCAGGGCTCATGGGGCTCGGGCACCCTGAGGCGTCAGGGGCTTGGCCAGCCCCACCACATGGCAGGGTaGGCCCAGAGAAAGACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: HQGSWGSGTLRRQGLGQPHHMAG*AQRKTQ Trigger: CTGAGTCTTTCTCTGGGCCCACCCTGCCATGTGGTG...GGGCTGGCCAAGCCCCTGACGCCTCAGGGTGCCCGAGCCCCATGAGCCCTGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCAGGGCTCATGGGGCTCGGGCACCCTGAGGCGTCAGGGGCTTGGCCAGCCCCCAGCTTTAGAACATTaGCTTACAGAGGGCCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HQGSWGSGTLRRQGLGQPPALEH*LTEGQE Trigger: CTCCTGGCCCTCTGTAAGTCAATGTTCTAAAGCTGG...GGGCTGGCCAAGCCCCTGACGCCTCAGGGTGCCCGAGCCCCATGAGCCCTGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAGGAGCAAAGGTCTGGGGACAGGGAACAGCGGGCAGGCACCCTCCCTTCCGCAGACTCAGAAGCGGGTaGTCTGGTAGCGCAGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QGAKVWGQGTAGRHPPFRRLRSG*SGSAAS Trigger: GGAGGCTGCGCTACCAGAGCACCCGCTTCTGAGTCT...GCGGAAGGGAGGGTGCCTGCCCGCTGTTCCCTGTCCCCAGACCTTTGCTCCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCAGGGCTCATGGGGCTCGGGCACCCTGAGGCGTCAGGGGCTTGGCCAGCCCATCAGAGTCCTAGGCTaGACCCCTAAAATCAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: HQGSWGSGTLRRQGLGQPIRVLG*TPKISS Trigger: GGAACTGATTTTAGGGGTTCAGCCTAGGACTCTGAT...GGGCTGGCCAAGCCCCTGACGCCTCAGGGTGCCCGAGCCCCATGAGCCCTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | CACCAGGGCTCATGGGGCTCGGGCACCCTGAGGCGTCAGGGGCTTGGCCAGCCCCATTTGCGCACACAGTaGACTCCACATGTATGCACA | + |
|
Preference number: 2 (lower is better) Translates to: HQGSWGSGTLRRQGLGQPHLRTQ*TPHVCT Trigger: TGTGCATACATGTGGAGTGCACTGTGTGCGCAAATG...GGGCTGGCCAAGCCCCTGACGCCTCAGGGTGCCCGAGCCCCATGAGCCCTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCCTCTCCATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCATGCCTTTGGAGCGGCTaGATAGCTCCCAGGGCACCC | + |
|
Preference number: 2 (lower is better) Translates to: QPSPSAAQSPAVERQALSCLWSG*IAPRAP Trigger: GGGTGCCCTGGGAGCTATTCAGCCGCTCCAAAGGCA...TGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGATGGAGAGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGGGCTGGGAGAGGGGCACCAAAGACCACCTAAACGCTGGCTTGGTTCTCCTGCTCTGCAGACCAATGTaGGACAGGATGGGGCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GGWERGTKDHLNAGLVLLLCRPM*DRMGQD Trigger: GTCCTGCCCCATCCTGTCTCACATTGGTCTGCAGAG...CAGGAGAACCAAGCCAGCGTTTAGGTGGTCTTTGGTGCCCCTCTCCCAGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCAGCTCCATCTGTGGCCCCACTGTaGCATGGGGGCTGGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SPSAAQSPAVERQALSAPSVAPL*HGGWER Trigger: CCTCTCCCAGCCCCCATGGCACAGTGGGGCCACAGA...TGGAGCTGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGATGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGGGCTGGGAGAGGGGCACCAAAGACCACCTAAACGCTGGCTTGGTTCTCCTGGAGAACTTTCGGCTCTaGGGACAGGAAAGTCACTGC | + |
|
Preference number: 2 (lower is better) Translates to: GGWERGTKDHLNAGLVLLENFRL*GQESHC Trigger: GCAGTGACTTTCCTGTCCTCAGAGCCGAAAGTTCTC...CAGGAGAACCAAGCCAGCGTTTAGGTGGTCTTTGGTGCCCCTCTCCCAGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTGCTGATAGTGGCTGGTGATTCCTGTCTAGTTCTAGCACCTCCTGCCCGCAGGGCCTCAGGGTCCTaGCACCTGGGCAGGCTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: KLLIVAGDSCLVLAPPARRASGS*HLGRLN Trigger: ATTCAGCCTGCCCAGGTGTCAGGACCCTGAGGCCCT...GCGGGCAGGAGGTGCTAGAACTAGACAGGAATCACCAGCCACTATCAGCAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCAGCTCCCACCACATGGCAGGGTaGGCCCAGAGAAAGACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LSIRSTVSCCRETGPFSSHHMAG*AQRKTQ Trigger: CTGAGTCTTTCTCTGGGCCCACCCTGCCATGTGGTG...GGAGCTGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGATGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCAGCTCCAGGAAGCAAGGAGCAAAGGTCTaGGGACAGGGAACAGCGGGC | + |
|
Preference number: 2 (lower is better) Translates to: IRSTVSCCRETGPFSSRKQGAKV*GQGTAG Trigger: GCCCGCTGTTCCCTGTCCCCAGACCTTTGCTCCTTG...CTTCCTGGAGCTGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CAA 90 bp | CATGGGGGCTGGGAGAGGGGCACCAAAGACCACCTAAACGCTGGCTaGGTTCTCCTGGGAGCCCAACAATCCCTCCATCAGAATGTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: HGGWERGTKDHLNAG*VLLGAQQSLHQNVY Trigger: GTACACATTCTGATGGAGGGATTGTTGGGCTCCCAGGAGAACCAAGCCAGCGTTTAGGTGGTCTTTGGTGCCCCTCTCCCAGCCCCCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCAGCTCCAGGAAGAGGCCCTCCTTAGAGTaGGGAAGGAGGCAGGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IRSTVSCCRETGPFSSRKRPSLE*GRRQER Trigger: TCTTTCCTGCCTCCTTCCTCACTCTAAGGAGGGCCT...CTTCCTGGAGCTGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGGGCTGGGAGAGGGGCACCAAAGACCACCTAAACGCTGGCTTGGTTCTCCTGATCAGAGTCCTAGGCTaGACCCCTAAAATCAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GGWERGTKDHLNAGLVLLIRVLG*TPKISS Trigger: GGAACTGATTTTAGGGGTTCAGCCTAGGACTCTGAT...CAGGAGAACCAAGCCAGCGTTTAGGTGGTCTTTGGTGCCCCTCTCCCAGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCCCGCTGAGGTAGGCAGCCCCTTTCTGTCCATCTTAAGGCCCCAGGATGCACCAGCTTTAGAACATTaGCTTACAGAGGGCCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LPAEVGSPFLSILRPQDAPALEH*LTEGQE Trigger: CTCCTGGCCCTCTGTAAGTCAATGTTCTAAAGCTGG...TGCATCCTGGGGCCTTAAGATGGACAGAAAGGGGCTGCCTACCTCAGCGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGGGCTGGGAGAGGGGCACCAAAGACCACCTAAACGCTGGCTTGGTTCTCCTGTGCACTCCACATGTATaGACACGATGCAGGAATTGG | + |
|
Preference number: 2 (lower is better) Translates to: GGWERGTKDHLNAGLVLLCTPHV*TRCRNW Trigger: CCAATTCCTGCATCGTGTGCATACATGTGGAGTGCA...CAGGAGAACCAAGCCAGCGTTTAGGTGGTCTTTGGTGCCCCTCTCCCAGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGGGCTGGGAGAGGGGCACCAAAGACCACCTAAACGCTGGCTTGGTTCTCCTGCATGTATGCACACGATaGAGGAATTGGATCCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GGWERGTKDHLNAGLVLLHVCTR*RNWIQF Trigger: GAACTGGATCCAATTCCTGCATCGTGTGCATACATG...CAGGAGAACCAAGCCAGCGTTTAGGTGGTCTTTGGTGCCCCTCTCCCAGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTGCCTTGAATGTCCGGGGAAGCTTCATCTACAAGGGCCTCAGGGTCCTGAGGCCCTCCTTAGAGTaGGGAAGGAGGCAGGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: TFALNVRGSFIYKGLRVLRPSLE*GRRQER Trigger: TCTTTCCTGCCTCCTTCCTCACTCTAAGGAGGGCCT...CAGGACCCTGAGGCCCTTGTAGATGAAGCTTCCCCGGACATTCAAGGCAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCAGCTCCAGGAAGGAGGGTGAAGTATCATaGAGGGTGGGAATTCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: IRSTVSCCRETGPFSSRKEGEVS*RVGILQ Trigger: CTGGAGAATTCCCACCCTGCATGATACTTCACCCTC...CTTCCTGGAGCTGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCCTCTCCATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCATGCACTCCACATGTATaGACACGATGCAGGAATTGG | + |
|
Preference number: 2 (lower is better) Translates to: QPSPSAAQSPAVERQALSCTPHV*TRCRNW Trigger: CCAATTCCTGCATCGTGTGCATACATGTGGAGTGCA...TGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGATGGAGAGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCCATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCAGCTCCCATTTGCGCACACAGTaGACTCCACATGTATGCACA | + |
|
Preference number: 2 (lower is better) Translates to: LSIRSTVSCCRETGPFSSHLRTQ*TPHVCT Trigger: TGTGCATACATGTGGAGTGCACTGTGTGCGCAAATG...GGAGCTGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGATGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGGACTCACAGAGAGGCTCTGCAGACCAATGTGAGACAGGATGGGGCAGGACTGAAAGAAGAAGATCCTaGCAAGGAGCAAAGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RDSQRGSADQCETGWGRTERRRS*QGAKVW Trigger: CCAGACCTTTGCTCCTTGGCAGGATCTTCTTCTTTC...AGTCCTGCCCCATCCTGTCTCACATTGGTCTGCAGAGCCTCTCTGTGAGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGGCCAGGAGGGACTCACAGAGAGGCTCTGCAGACCAATGTGAGACAGGATGGCATGTATGCACACGATaGAGGAATTGGATCCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: RARRDSQRGSADQCETGWHVCTR*RNWIQF Trigger: GAACTGGATCCAATTCCTGCATCGTGTGCATACATG...CCATCCTGTCTCACATTGGTCTGCAGAGCCTCTCTGTGAGTCCCTCCTGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGGACTCACAGAGAGGCTCTGCAGACCAATGTGAGACAGGATGGGGCAGGACTCACGTGTTGCACACATaGACTTACCTTCTCCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RDSQRGSADQCETGWGRTHVLHT*TYLLPH Trigger: ATGAGGGAGAAGGTAAGTGCATGTGTGCAACACGTG...AGTCCTGCCCCATCCTGTCTCACATTGGTCTGCAGAGCCTCTCTGTGAGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTTCTCCCTCATTCACTCAGATAAACATAGGTTCACGCACATGTGCACATACTGCCTTTGGAGCGGCTaGATAGCTCCCAGGGCACCC | + |
|
Preference number: 2 (lower is better) Translates to: TFSLIHSDKHRFTHMCTYCLWSG*IAPRAP Trigger: GGGTGCCCTGGGAGCTATTCAGCCGCTCCAAAGGCA...GTATGTGCACATGTGCGTGAACCTATGTTTATCTGAGTGAATGAGGGAGAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CAA 90 bp | AAATCAGTTCCTGGTGGGGTGCAAAGTCTCAGAGTTGGGTGCTTCTaGGCAAGGCTGAGAGAACTTTCGGCTCTGAGGACAGGAAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: KSVPGGVQSLRVGCF*ARLRELSALRTGKS Trigger: TGACTTTCCTGTCCTCAGAGCCGAAAGTTCTCTCAGCCTTGCCAAGAAGCACCCAACTCTGAGACTTTGCACCCCACCAGGAACTGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | ACATTTGCCTTGAATGTCCGGGGAAGCTTCATCTACAAGGGCCTCAGGGTCCTGCACGTGTTGCACACATaGACTTACCTTCTCCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: TFALNVRGSFIYKGLRVLHVLHT*TYLLPH Trigger: ATGAGGGAGAAGGTAAGTGCATGTGTGCAACACGTG...CAGGACCCTGAGGCCCTTGTAGATGAAGCTTCCCCGGACATTCAAGGCAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAATACATACATACATTTGCGCACACAGTGCACTCCACATGTATGCACACGATAGACTCAGAAGCGGGTaGTCTGGTAGCGCAGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QIHTYICAHSALHMYAHDRLRSG*SGSAAS Trigger: GGAGGCTGCGCTACCAGAGCACCCGCTTCTGAGTCT...ATCGTGTGCATACATGTGGAGTGCACTGTGTGCGCAAATGTATGTATGTATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTGCTGATAGTGGCTGGTGATTCCTGTCTAGTTCTAGCACCTCCTGCCCGCATACATACATACATTTaGGCACACAGTGCACTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: KLLIVAGDSCLVLAPPARIHTYI*AHSALH Trigger: GTGGAGTGCACTGTGTGCGCAAATGTATGTATGTAT...GCGGGCAGGAGGTGCTAGAACTAGACAGGAATCACCAGCCACTATCAGCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTGCCTTGAATGTCCGGGGAAGCTTCATCTACAAGGGCCTCAGGGTCCTGTGCACATACACACATTaGCTTGTGCAGTCATACATA | + |
|
Preference number: 2 (lower is better) Translates to: TFALNVRGSFIYKGLRVLCTYTH*LVQSYI Trigger: TATGTATGACTGCACAAGTCAATGTGTGTATGTGCA...CAGGACCCTGAGGCCCTTGTAGATGAAGCTTCCCCGGACATTCAAGGCAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCTTCTCCCTCATTCACTCAGATAAACATAGGTTCACGCACATGTGCACATACAGTCTCAGAGTTGGGTaGTTCTTGGCAAGGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: TFSLIHSDKHRFTHMCTYSLRVG*FLARLR Trigger: TCTCAGCCTTGCCAAGAAGCACCCAACTCTGAGACT...GTATGTGCACATGTGCGTGAACCTATGTTTATCTGAGTGAATGAGGGAGAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCGCTTTTCCTCGCAAGGCACATTTGCCTTGAATGTCCGGGGAAGCTTCATCATACATACATACATTTaGGCACACAGTGCACTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: IRFSSQGTFALNVRGSFIIHTYI*AHSALH Trigger: GTGGAGTGCACTGTGTGCGCAAATGTATGTATGTAT...GATGAAGCTTCCCCGGACATTCAAGGCAAATGTGCCTTGCGAGGAAAAGCGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CAA 90 bp | GACATGTATACTCACGCAATACACTTGTGCACACGCATACATAATTaGCATGCACGTGTTGCACACATGCACTTACCTTCTCCCTCATTC | + |
|
Preference number: 2 (lower is better) Translates to: DMYTHAIHLCTRIHN*HARVAHMHLPSPSF Trigger: GAATGAGGGAGAAGGTAAGTGCATGTGTGCAACACGTGCATGCAAATTATGTATGCGTGTGCACAAGTGTATTGCGTGAGTATACATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGCAGTCATACATATACAGGCACTCATATTCATACCCTTGTTTGCTCACATGGAAAGAAGAAGATCCTaGCAAGGAGCAAAGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CAVIHIQALIFIPLFAHMERRRS*QGAKVW Trigger: CCAGACCTTTGCTCCTTGGCAGGATCTTCTTCTTTC...CATGTGAGCAAACAAGGGTATGAATATGAGTGCCTGTATATGTATGACTGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR TCA 72 bp | GTTCATTGCACCAGGGCTCATGGGGCTCGGGCACCCTaGGGCGTCAGGGGCTTGGCCAGCCCTCTCCATCCG | + |
|
Preference number: 3 (lower is better) Translates to: VHCTRAHGARAP*GVRGLASPLHP Trigger: CGGATGGAGAGGGCTGGCCAAGCCCCTGACGCCTCAGGGTGCCCGAGCCCCATGAGCCCTGGTGCAATGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CCA 72 bp | GGAACAGCGGGCAGGCACCCTCCCTTCCGCACCACATaGCAGGGTGGGCCCAGAGAAAGACTCAGAAGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: GTAGRHPPFRTT*QGGPRERLRSG Trigger: CCCGCTTCTGAGTCTTTCTCTGGGCCCACCCTGCCATGTGGTGCGGAAGGGAGGGTGCCTGCCCGCTGTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR GCA 72 bp | CTGGCTGCACAGCAGGCTACAGAGGGCACAGGCTTCTaGAGGGGATCGGGGGCTGCAGCTCGGAAAGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LAAQQATEGTGF*RGSGAAARKEG Trigger: CCCTTCTTTCCGAGCTGCAGCCCCCGATCCCCTGCAGAAGCCTGTGCCCTCTGTAGCCTGCTGTGCAGCCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR GCA 72 bp | TGGCAGGGTGGGCCCAGAGAAAGACTCAGAAGCGGGTaGTCTGGTAGCGCAGCCTCCGTAGATCTGCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WQGGPRERLRSG*SGSAASVDLPA Trigger: GGCTGGCAGATCTACGGAGGCTGCGCTACCAGAGCACCCGCTTCTGAGTCTTTCTCTGGGCCCACCCTGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR GCA 72 bp | CCAACAGGCTGTGCAAAGTCAGACAGGACGCCTGGCTaGACAGCAGGCTACAGAGGGCACAGGCTTCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PTGCAKSDRTPG*TAGYRGHRLLQ Trigger: CTGCAGAAGCCTGTGCCCTCTGTAGCCTGCTGTGCAGCCAGGCGTCCTGTCTGACTTTGCACAGCCTGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CCA 72 bp | GGGCTGGGAGAGGGGCACCAAAGACCACCTAAACGCTaGCTTGGTTCTCCTGGGAGCCCAACAATCCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GLGEGHQRPPKR*LGSPGSPTIPP Trigger: TGGAGGGATTGTTGGGCTCCCAGGAGAACCAAGCCAGCGTTTAGGTGGTCTTTGGTGCCCCTCTCCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CCA 72 bp | CTTCCCAACAGGCTGTGCAAAGTCAGACAGGACGCCTaGCTGCACAGCAGGCTACAGAGGGCACAGGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPNRLCKVRQDA*LHSRLQRAQAS Trigger: AGAAGCCTGTGCCCTCTGTAGCCTGCTGTGCAGCCAGGCGTCCTGTCTGACTTTGCACAGCCTGTTGGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGCTGGGAGAGGGGCACCAAAGACCACCTAAACGCTGGCTTGGTTCTCCTGAGAGTTGGGTGCTTCTaGGCAAGGCTGAGAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: GGWERGTKDHLNAGLVLLRVGCF*ARLREL Trigger: AAGTTCTCTCAGCCTTGCCAAGAAGCACCCAACTCT...CAGGAGAACCAAGCCAGCGTTTAGGTGGTCTTTGGTGCCCCTCTCCCAGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CCA 72 bp | TCAGAAAGAAGAAGATCCTGCCAAGGAGCAAAGGTCTaGGGACAGGGAACAGCGGGCAGGCACCCTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SERRRSCQGAKV*GQGTAGRHPPF Trigger: GAAGGGAGGGTGCCTGCCCGCTGTTCCCTGTCCCCAGACCTTTGCTCCTTGGCAGGATCTTCTTCTTTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR TCA 72 bp | GGTGATTCCTGTCTAGTTCTAGCACCTCCTGCCCGCTaGGGTAGGCAGCCCCTTTCTGTCCATCTTAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GDSCLVLAPPAR*GRQPLSVHLKA Trigger: GGCCTTAAGATGGACAGAAAGGGGCTGCCTACCTCAGCGGGCAGGAGGTGCTAGAACTAGACAGGAATCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTGCTGATAGTGGCTGGTGATTCCTGTCTAGTTCTAGCACCTCCTGCCCGCGGAAAGTCACTGCCTTaGGAGCGGCTGAATAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KLLIVAGDSCLVLAPPARGKSLP*ERLNSS Trigger: GGAGCTATTCAGCCGCTCCAAAGGCAGTGACTTTCC...GCGGGCAGGAGGTGCTAGAACTAGACAGGAATCACCAGCCACTATCAGCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCAGCTCCCCCAGCTTTAGAACATaGACTTACAGAGGGCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSIRSTVSCCRETGPFSSPSFRT*TYRGPG Trigger: TCCTGGCCCTCTGTAAGTCAATGTTCTAAAGCTGGG...GGAGCTGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGATGGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR TCA 72 bp | CAGGAGGGACTCACAGAGAGGCTCTGCAGACCAATGTaGGACAGGATGGGGCAGGACTCAGTAGTCATTAGC | + |
|
Preference number: 3 (lower is better) Translates to: QEGLTERLCRPM*DRMGQDSVVIS Trigger: GCTAATGACTACTGAGTCCTGCCCCATCCTGTCTCACATTGGTCTGCAGAGCCTCTCTGTGAGTCCCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTGCTGATAGTGGCTGGTGATTCCTGTCTAGTTCTAGCACCTCCTGCCCGCTGCAAAGTCTCAGAGTaGGGTGCTTCTTGGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KLLIVAGDSCLVLAPPARCKVSE*GASWQG Trigger: GCCTTGCCAAGAAGCACCCAACTCTGAGACTTTGCA...GCGGGCAGGAGGTGCTAGAACTAGACAGGAATCACCAGCCACTATCAGCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCCAGGAGGGACTCACAGAGAGGCTCTGCAGACCAATGTGAGACAGGATGGACACGCATACATAATTaGCATGCACGTGTTGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: RARRDSQRGSADQCETGWTRIHN*HARVAH Trigger: GTGTGCAACACGTGCATGCAAATTATGTATGCGTGT...CCATCCTGTCTCACATTGGTCTGCAGAGCCTCTCTGTGAGTCCCTCCTGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTGCTGATAGTGGCTGGTGATTCCTGTCTAGTTCTAGCACCTCCTGCCCGCATTTGCATGCACGTGTaGCACACATGCACTTACCTT | + |
|
Preference number: 3 (lower is better) Translates to: KLLIVAGDSCLVLAPPARICMHV*HTCTYL Trigger: AAGGTAAGTGCATGTGTGCAACACGTGCATGCAAAT...GCGGGCAGGAGGTGCTAGAACTAGACAGGAATCACCAGCCACTATCAGCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATTTGCCTTGAATGTCCGGGGAAGCTTCATCTACAAGGGCCTCAGGGTCCTGATTTGCATGCACGTGTaGCACACATGCACTTACCTT | + |
|
Preference number: 3 (lower is better) Translates to: TFALNVRGSFIYKGLRVLICMHV*HTCTYL Trigger: AAGGTAAGTGCATGTGTGCAACACGTGCATGCAAAT...CAGGACCCTGAGGCCCTTGTAGATGAAGCTTCCCCGGACATTCAAGGCAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR GCA 72 bp | TTGCGCACACAGTGCACTCCACATGTATGCACACGATaGAGGAATTGGATCCAGTTCAGGAGTTCAAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRTQCTPHVCTR*RNWIQFRSSSS Trigger: AGAGCTTGAACTCCTGAACTGGATCCAATTCCTGCATCGTGTGCATACATGTGGAGTGCACTGTGTGCGCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR GCA 72 bp | TACATACATTTGCGCACACAGTGCACTCCACATGTATaGACACGATGCAGGAATTGGATCCAGTTCAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: YIHLRTQCTPHV*TRCRNWIQFRS Trigger: ACTCCTGAACTGGATCCAATTCCTGCATCGTGTGCATACATGTGGAGTGCACTGTGTGCGCAAATGTATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR CCA 90 bp | CACCAGGGCTCATGGGGCTCGGGCACCCTGAGGCGTCAGGGGCTTGGCCAGCCCCCGGCTATCCAGCTCTaGCGGGAATTTGGTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HQGSWGSGTLRRQGLGQPPAIQL*REFGLE Trigger: TTCCAGACCAAATTCCCGCCAGAGCTGGATAGCCGG...GGGCTGGCCAAGCCCCTGACGCCTCAGGGTGCCCGAGCCCCATGAGCCCTGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGCAAAGGTCTGGGGACAGGGAACAGCGGGCAGGCACCCTCCCTTCCGCCCTCCAGATAGGAGCTaGCCCCGATCTTCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGAKVWGQGTAGRHPPFRPPDRS*PRSSQP Trigger: AGGCTGAGAAGATCGGGGGCAGCTCCTATCTGGAGG...GCGGAAGGGAGGGTGCCTGCCCGCTGTTCCCTGTCCCCAGACCTTTGCTCCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR TCA 90 bp | CACCAGGGCTCATGGGGCTCGGGCACCCTGAGGCGTCAGGGGCTTGGCCAGCCCAACGGGAAATCTTCTTaGGAACCTTCTCATAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQGSWGSGTLRRQGLGQPNGKSS*EPSHSG Trigger: CCCACTATGAGAAGGTTCTCAAGAAGATTTCCCGTT...GGGCTGGCCAAGCCCCTGACGCCTCAGGGTGCCCGAGCCCCATGAGCCCTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR CCA 90 bp | GCGGGCAGGCACCCTCCCTTCCGCACCACATGGCAGGGTGGGCCCAGAGAAAGAGCTCTGGCGGGAATTTaGTCTGGAACTGACAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: AGRHPPFRTTWQGGPRERALAGI*SGTDRW Trigger: CCATCTGTCAGTTCCAGACCAAATTCCCGCCAGAGC...TCTTTCTCTGGGCCCACCCTGCCATGTGGTGCGGAAGGGAGGGTGCCTGCCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGCTGATAGTGGCTGGTGATTCCTGTCTAGTTCTAGCACCTCCTGCCCGCCGCTGCCGCTGCTGCTaGCGCTACTGGAACTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLLIVAGDSCLVLAPPARRCRCC*RYWNYH Trigger: GTGGTAGTTCCAGTAGCGGCAGCAGCAGCGGCAGCG...GCGGGCAGGAGGTGCTAGAACTAGACAGGAATCACCAGCCACTATCAGCAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCAGGAGGGACTCACAGAGAGGCTCTGCAGACCAATGTGAGACAGGATGGTGCTGCTGCCGCTACTaGAACTACCACTGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RARRDSQRGSADQCETGWCCCRY*NYHCCT Trigger: GGTGCAGCAGTGGTAGTTCCAGTAGCGGCAGCAGCA...CCATCCTGTCTCACATTGGTCTGCAGAGCCTCTCTGTGAGTCCCTCCTGGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCAGCTCCCTTCGCCTGAGCTCCTaGAGATTGTGGACCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSIRSTVSCCRETGPFSSLRLSS*RLWTSV Trigger: CACTGAGGTCCACAATCTTCAGGAGCTCAGGCGAAG...GGAGCTGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGATGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTGCCTTGAATGTCCGGGGAAGCTTCATCTACAAGGGCCTCAGGGTCCTGCCATGCAGAGGAAGATaGAGTAGGCCGTGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFALNVRGSFIYKGLRVLPCRGR*SRPWRR Trigger: CCTGCGCCACGGCCTACTTCATCTTCCTCTGCATGG...CAGGACCCTGAGGCCCTTGTAGATGAAGCTTCCCCGGACATTCAAGGCAAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CAA 72 bp | GAACTTTCGGCTCTGAGGACAGGAAAGTCACTGCCTTaGGAGCGGCTGAATAGCTCCCAGGGCACCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELSALRTGKSLP*ERLNSSQGTHL Trigger: GAGATGGGTGCCCTGGGAGCTATTCAGCCGCTCCAAAGGCAGTGACTTTCCTGTCCTCAGAGCCGAAAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTGGGTGCTTCTTGGCAAGGCTGAGAGAACTTTCGGCTCTGAGGACAGGCTTCGCCTGAGCTCCTaGAGATTGTGGACCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSWVLLGKAERTFGSEDRLRLSS*RLWTSV Trigger: CACTGAGGTCCACAATCTTCAGGAGCTCAGGCGAAG...CCTGTCCTCAGAGCCGAAAGTTCTCTCAGCCTTGCCAAGAAGCACCCAACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCCAGGAGGGACTCACAGAGAGGCTCTGCAGACCAATGTGAGACAGGATGGGGAACTGACAGATGGTaGCGTCACTGTAGTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RARRDSQRGSADQCETGWGTDRW*RHCSLS Trigger: AGAGAGACTACAGTGACGGCACCATCTGTCAGTTCC...CCATCCTGTCTCACATTGGTCTGCAGAGCCTCTCTGTGAGTCCCTCCTGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CAA 72 bp | CCTGGTGGGGTGCAAAGTCTCAGAGTTGGGTGCTTCTaGGCAAGGCTGAGAGAACTTTCGGCTCTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGGVQSLRVGCF*ARLRELSALRT Trigger: TGTCCTCAGAGCCGAAAGTTCTCTCAGCCTTGCCAAGAAGCACCCAACTCTGAGACTTTGCACCCCACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR GCA 90 bp | ATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCAGCTCCAGGAAGGGAACTGACAGATGGTaGCGTCACTGTAGTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRSTVSCCRETGPFSSRKGTDRW*RHCSLS Trigger: AGAGAGACTACAGTGACGGCACCATCTGTCAGTTCC...CTTCCTGGAGCTGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTGCTGATAGTGGCTGGTGATTCCTGTCTAGTTCTAGCACCTCCTGCCCGCAATTTGGTCTGGAACTaGCAGATGGTGCCGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KLLIVAGDSCLVLAPPARNLVWN*QMVPSL Trigger: CAGTGACGGCACCATCTGTCAGTTCCAGACCAAATT...GCGGGCAGGAGGTGCTAGAACTAGACAGGAATCACCAGCCACTATCAGCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTCTCCATCCGCAGCACAGTCTCCTGCTGTAGAGAGACAGGCCCTTTCAAACGGGAAATCTTCTTaGGAACCTTCTCATAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPSAAQSPAVERQALSNGKSS*EPSHSG Trigger: CCCACTATGAGAAGGTTCTCAAGAAGATTTCCCGTT...TGAAAGGGCCTGTCTCTCTACAGCAGGAGACTGTGCTGCGGATGGAGAGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCTGATAGTGGCTGGTGATTCCTGTCTAGTTCTAGCACCTCCTGCCCGCTCTGGAACTGACAGATaGTGCCGTCACTGTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLLIVAGDSCLVLAPPARSGTDR*CRHCSL Trigger: GAGACTACAGTGACGGCACCATCTGTCAGTTCCAGA...GCGGGCAGGAGGTGCTAGAACTAGACAGGAATCACCAGCCACTATCAGCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTGCCTTGAATGTCCGGGGAAGCTTCATCTACAAGGGCCTCAGGGTCCTGGCTCTGGCGGGAATTTaGTCTGGAACTGACAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TFALNVRGSFIYKGLRVLALAGI*SGTDRW Trigger: CCATCTGTCAGTTCCAGACCAAATTCCCGCCAGAGC...CAGGACCCTGAGGCCCTTGTAGATGAAGCTTCCCCGGACATTCAAGGCAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTGCCTTGAATGTCCGGGGAAGCTTCATCTACAAGGGCCTCAGGGTCCTGTCTGGAACTGACAGATaGTGCCGTCACTGTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFALNVRGSFIYKGLRVLSGTDR*CRHCSL Trigger: GAGACTACAGTGACGGCACCATCTGTCAGTTCCAGA...CAGGACCCTGAGGCCCTTGTAGATGAAGCTTCCCCGGACATTCAAGGCAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTCCCTCATTCACTCAGATAAACATAGGTTCACGCACATGTGCACATACCCTCCAGATAGGAGCTaGCCCCGATCTTCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TFSLIHSDKHRFTHMCTYPPDRS*PRSSQP Trigger: AGGCTGAGAAGATCGGGGGCAGCTCCTATCTGGAGG...GTATGTGCACATGTGCGTGAACCTATGTTTATCTGAGTGAATGAGGGAGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CAA 72 bp | ACAGTGCACTCCACATGTATGCACACGATGCAGGAATaGGATCCAGTTCAGGAGTTCAAGCTCTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVHSTCMHTMQE*DPVQEFKLCPA Trigger: AGCTGGACAGAGCTTGAACTCCTGAACTGGATCCAATTCCTGCATCGTGTGCATACATGTGGAGTGCACTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGTCATACATATACAGGCACTCATATTCATACCCTTGTTTGCTCACATGTGCTGCTGCCGCTACTaGAACTACCACTGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CAVIHIQALIFIPLFAHMCCCRY*NYHCCT Trigger: GGTGCAGCAGTGGTAGTTCCAGTAGCGGCAGCAGCA...CATGTGAGCAAACAAGGGTATGAATATGAGTGCCTGTATATGTATGACTGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGCAGTCATACATATACAGGCACTCATATTCATACCCTTGTTTGCTCACATAATTTGGTCTGGAACTaGCAGATGGTGCCGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LCSHTYTGTHIHTLVCSHNLVWN*QMVPSL Trigger: CAGTGACGGCACCATCTGTCAGTTCCAGACCAAATT...ATGTGAGCAAACAAGGGTATGAATATGAGTGCCTGTATATGTATGACTGCACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| 3UTR CAA 72 bp | TACTTACACATAGACATGTATACTCACGCAATACACTaGTGCACACGCATACATAATTTGCATGCACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLHIDMYTHAIH*CTRIHNLHARV Trigger: AACACGTGCATGCAAATTATGTATGCGTGTGCACAAGTGTATTGCGTGAGTATACATGTCTATGTGTAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS GCA 90 bp | CCGCCCCTCCCCCGCCAGCGCTGCTGCTGCCGCTGCCGCTGCTGCTaGCGCTACTGGAACTACCACTGCTGCACCGGTCCTCATAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PPLPRQRCCCRCRCC*RYWNYHCCTGPHRW Trigger: CCATCTATGAGGACCGGTGCAGCAGTGGTAGTTCCAGTAGCGGCAGCAGCAGCGGCAGCGGCAGCAGCAGCGCTGGCGGGGGAGGGGCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS CCA 90 bp | CCCCGCCAGCGCTGCTGCTGCCGCTGCCGCTGCTGCTGCCGCTACTaGAACTACCACTGCTGCACCGGTCCTCATAGATGGAGATCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PRQRCCCRCRCCCRY*NYHCCTGPHRWRSR Trigger: TCGAGATCTCCATCTATGAGGACCGGTGCAGCAGTGGTAGTTCCAGTAGCGGCAGCAGCAGCGGCAGCGGCAGCAGCAGCGCTGGCGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGCAAAGGTCTGGGGACAGGGAACAGCGGGCAGGCACCCTCCCTTCCGCCTCTGGATAAAGACCTaGGTGGCCAGCGAAGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGAKVWGQGTAGRHPPFRLWIKT*VASEAL Trigger: AAGCGCTTCGCTGGCCACCAAGGTCTTTATCCAGAG...GCGGAAGGGAGGGTGCCTGCCCGCTGTTCCCTGTCCCCAGACCTTTGCTCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGCACCCTCCCTTCCGCACCACATGGCAGGGTGGGCCCAGAGAAAGACTCACTCTGGATAAAGACCTaGGTGGCCAGCGAAGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGTLPSAPHGRVGPEKDSLWIKT*VASEAL Trigger: AAGCGCTTCGCTGGCCACCAAGGTCTTTATCCAGAG...TGAGTCTTTCTCTGGGCCCACCCTGCCATGTGGTGCGGAAGGGAGGGTGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS CCA 72 bp | CGCTGCTGCTGCCGCTGCCGCTGCTGCTGCCGCTACTaGAACTACCACTGCTGCACCGGTCCTCATAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: RCCCRCRCCCRY*NYHCCTGPHRW Trigger: CCATCTATGAGGACCGGTGCAGCAGTGGTAGTTCCAGTAGCGGCAGCAGCAGCGGCAGCGGCAGCAGCAGCG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS GCA 72 bp | CCGTGGCGCAGGCCAGGCAGCCCTCCAGATAGGAGCTaGCCCCGATCTTCTCAGCCTCCGCATAAAAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: PWRRPGSPPDRS*PRSSQPPHKNH Trigger: ATGGTTTTTATGCGGAGGCTGAGAAGATCGGGGGCAGCTCCTATCTGGAGGGCTGCCTGGCCTGCGCCACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||
| CDS GCA 72 bp | AAACCATTGAGGGTCTTCACCGTCTCCTCAAAGAGCTaGCGCTCAATCCGGCTATCCAGCTCTGGCGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KPLRVFTVSSKS*RSIRLSSSGGN Trigger: ATTCCCGCCAGAGCTGGATAGCCGGATTGAGCGGCAGCTCTTTGAGGAGACGGTGAAGACCCTCAATGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087123.6 ENSMUST00000122375.8 |
||