Pregenerated sensors for GOLGA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021192Ensembl transcript IDs: ENSMUST00000021609.10, ENSMUST00000179218.9, ENSMUST00000222744.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCCCAGCTCTGGACAATaGCAGGCACTCATGGGAACC | + |
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Preference number: 2 (lower is better) Translates to: PALDNGRHSWEPVALFTCPSSGQ*QALMGT Trigger: GGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGG...GCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| 3UTR-3UTR CCA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGCCCAGCTCTGGACAATaGCAGGCACTCATGGGAACC | + |
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Preference number: 2 (lower is better) Translates to: YCLHLETLMGIGESQTPEPSSGQ*QALMGT Trigger: GGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGG...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAATGCAGATCCCAGCTCTaGACAATGGCAGGCACTCAT | + |
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Preference number: 2 (lower is better) Translates to: PQIAFSLSLYISRELNSECRSQL*TMAGTH Trigger: ATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCA...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| 3UTR CCA 72 bp | CAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTaGCTCTGTTCACTTGCCGTACGGTTGGTCATGGTG | + |
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Preference number: 3 (lower is better) Translates to: QLWTMAGTHGNQ*LCSLAVRLVMV Trigger: CACCATGACCAACCGTACGGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| 3UTR CCA 72 bp | CTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATaGGAACCAGTGGCTCTGTTCACTTGCCGTACGGTT | + |
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Preference number: 3 (lower is better) Translates to: LQIPALDNGRHS*EPVALFTCRTV Trigger: AACCGTACGGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR TCA 90 bp | CTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGGGCCGTGCTCTCCTCTaGGGGTTCCTTATGAACTTC | + |
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Preference number: 4 (lower is better) Translates to: LQIPALDNGRHSWEPVALGRALL*GFLMNF Trigger: GAAGTTCATAAGGAACCCTCAGAGGAGAGCACGGCC...CAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CCA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACAGACGCATGCTCGGTaGGATGGGTGGCATCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: VLIFLQIPALDNGRHSWEQTHAR*DGWHPR Trigger: TCGGGGATGCCACCCATCCCACCGAGCATGCGTCTG...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CCA 90 bp | CAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCTGGCAGATCCACTGTTaGGCCCCGAGGAGGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QLWTMAGTHGNQWLCSLAWQIHC*APRRQN Trigger: ATTCTGCCTCCTCGGGGCCCAACAGTGGATCTGCCA...GGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR TCA 90 bp | CTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTGGTATTCTCCTTTCTaGGAGCTGTTGCAGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIPALDNGRHSWEPVALWYSPF*ELLQPP Trigger: AGGGGGCTGCAACAGCTCTCAGAAAGGAGAATACCA...CAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CCA 90 bp | AGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCGTCAAGGCGCTCCAGCTaGAAGACCAGGGAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGQWQALMGTSGSVHLPSRRSS*KTREFF Trigger: AAAGAACTCCCTGGTCTTCCAGCTGGAGCGCCTTGA...CGGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGATGGCAGATCCACTGTTaGGCCCCGAGGAGGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SADLSADPSSGQWQALMGWQIHC*APRRQN Trigger: ATTCTGCCTCCTCGGGGCCCAACAGTGGATCTGCCA...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | CTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGACTGGACTTCATTCCTaGGCAACTGATTCTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LQIPALDNGRHSWEPVALTGLHS*ATDSPV Trigger: GACTGGAGAATCAGTTGCTCAGGAATGAAGTCCAGT...CAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR GCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAGATTGGACAGCTCCTaGGACCTGCTGCTACCGTCA | + |
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Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDRLDSS*DLLLPS Trigger: TGACGGTAGCAGCAGGTCGCAGGAGCTGTCCAATCT...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR GCA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAAGTCCTTTGCGGCCACTaGTTCGGTGAGGTCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLIFLQIPALDNGRHSWEVLCGH*FGEVIY Trigger: GTAGATGACCTCACCGAAGCAGTGGCCGCAAAGGAC...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR GCA 90 bp | AGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCGTGGATCTCCTCCTTCTaGATCTCCTTCTCATGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSGQWQALMGTSGSVHLPWISSF*ISFSCR Trigger: TCGGCATGAGAAGGAGATGCAGAAGGAGGAGATCCA...CGGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR CCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACCATCCCCGACTGTCCTaGATCCGACTTTCACGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDHPRLS*IRLSRS Trigger: CGAACGTGAAAGTCGGATCCAGGACAGTCGGGGATG...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | TCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCGTACAGTTCTTTTCTGTGCTaGGGCTCTCCAGCATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGQWQALMGTSGSVHLPYSSFLC*GSPAWS Trigger: AGACCATGCTGGAGAGCCTCAGCACAGAAAAGAACT...GTACGGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR GCA 90 bp | TGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCGTACGGTCCGTCTCCAGCTCTTaGTTAGATGTCCTCTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: WTMAGTHGNQWLCSLAVRSVSSS*LDVLCL Trigger: TAAGCAGAGGACATCTAAGCAAGAGCTGGAGACGGA...CCGTACGGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR CCA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAATCAAGGCGCTCCAGCTaGAAGACCAGGGAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLIFLQIPALDNGRHSWESRRSS*KTREFF Trigger: AAAGAACTCCCTGGTCTTCCAGCTGGAGCGCCTTGA...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACTCAAGGCGCTCCAGCTaGAAGACCAGGGAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDSRRSS*KTREFF Trigger: AAAGAACTCCCTGGTCTTCCAGCTGGAGCGCCTTGA...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | AGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCTGGTATTCTCCTTTCTaGGAGCTGTTGCAGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSADLSADPSSGQWQALWYSPF*ELLQPP Trigger: AGGGGGCTGCAACAGCTCTCAGAAAGGAGAATACCA...GAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | CAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCTGGTCTGTTTCTGGATaGGTGTTTCCGTTAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: QIPALDNGRHSWEPVALFWSVSG*VFPLAD Trigger: ATCAGCTAACGGAAACACTCATCCAGAAACAGACCA...GAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR TCA 90 bp | AGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCTCAGCAGTACGATCATaGCCCAGAGGTGCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSADLSADPSSGQWQALSAVRS*PRGAAK Trigger: CTTTGCTGCACCTCTGGGTCATGATCGTACTGCTGA...GAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR GCA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGTGGCACTTGGGGCCGTaGTCTCCTCTGAGGGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: YCLHLETLMGIGESQTPEWHLGP*SPLRVP Trigger: AGGAACCCTCAGAGGAGAGCACGGCCCCAAGTGCCA...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR GCA 90 bp | TGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCGTACGGTGCATCTCCTTCTCATaGCGAAGTTCTTCCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: WTMAGTHGNQWLCSLAVRCISFS*RSSSNS Trigger: GGAATTGGAAGAACTTCGGCATGAGAAGGAGATGCA...CCGTACGGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR GCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACTGGATCTCCTCCTTCTaGATCTCCTTCTCATGCCGA | + |
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Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDWISSF*ISFSCR Trigger: TCGGCATGAGAAGGAGATGCAGAAGGAGGAGATCCA...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACCTTCCACTCTCCCAGTaGGCTCTTTTTGGGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDLPLSQ*ALFGNC Trigger: ACAGTTCCCAAAAAGAGCCCACTGGGAGAGTGGAAG...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CCA 90 bp | AGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCTTCCTCCCATGGCCTTaGTGGTGGTTACACTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SLSADLSADPSSGQWQALFLPWP*WWLHWC Trigger: ACACCAGTGTAACCACCACCAAGGCCATGGGAGGAA...GAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CCA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAGCTCTCTCTTTAGAGTaGCATCAGCTTCATGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SADLSADPSSGQWQALMGALSLE*HQLHAA Trigger: GGCTGCATGAAGCTGATGCCACTCTAAAGAGAGAGC...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAAAGGATCGTGGCTTTCTaGTGTCGGATGTTATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VLIFLQIPALDNGRHSWERIVAF*CRMLSA Trigger: TGCTGATAACATCCGACATCAGAAAGCCACGATCCT...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAAGGATCGTGGCTTTCTaGTGTCGGATGTTATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SADLSADPSSGQWQALMGRIVAF*CRMLSA Trigger: TGCTGATAACATCCGACATCAGAAAGCCACGATCCT...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGATCTGAGGGTTCCTTATaGACTTCAGGCACAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: SADLSADPSSGQWQALMGSEGSL*TSGTES Trigger: GGATTCTGTGCCTGAAGTTCATAAGGAACCCTCAGA...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACTCATTCCTGAGCAACTaGTTCTCCAGTCGGAGATTG | + |
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Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDSFLSN*FSSRRL Trigger: CAATCTCCGACTGGAGAATCAGTTGCTCAGGAATGA...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | CTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGAATGAGGCCATTTCCTaGTTTAAAGACTGGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LQIPALDNGRHSWEPVALNEAIS*FKDWTS Trigger: TGAAGTCCAGTCTTTAAATCAGGAAATGGCCTCATT...CAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | AGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCAGTTCTTTTCTGTGCTaGGGCTCTCCAGCATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLSADLSADPSSGQWQALSSFLC*GSPAWS Trigger: AGACCATGCTGGAGAGCCTCAGCACAGAAAAGAACT...GAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR GCA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGACTGTGTAGCTTGACTTaGTGCTGGAGTTCATCAACC | + |
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Preference number: 4 (lower is better) Translates to: SADLSADPSSGQWQALMGLCSLT*CWSSST Trigger: GGTTGATGAACTCCAGCAGCAAGTCAAGCTACACAG...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CCA 90 bp | CCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCTTTCTAGCTCTGACTaGCTGCTGTTGCTTAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: PALDNGRHSWEPVALFTCLSSSD*LLLLKV Trigger: AACTTTAAGCAACAGCAGCCAGTCAGAGCTAGAAAG...GCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR CCA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGTGGCAGATCCACTGTTaGGCCCCGAGGAGGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: YCLHLETLMGIGESQTPEWQIHC*APRRQN Trigger: ATTCTGCCTCCTCGGGGCCCAACAGTGGATCTGCCA...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CCA 90 bp | TCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCGTACCAGCAAAGCCTAAATTaGTCAATGGAGCTAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SGQWQALMGTSGSVHLPYQQSLN*SMELAA Trigger: AGCTGCTAGCTCCATTGACCAATTTAGGCTTTGCTG...GTACGGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR TCA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAATCCGGTCTGGTAATTTaGATCTGTGTTTTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VLIFLQIPALDNGRHSWESGLVI*ICVLLL Trigger: CAGCAGCAAAACACAGATTCAAATTACCAGACCGGA...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGACTACTACCTTCCTTGTaGTCCTGCATTATTCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SADLSADPSSGQWQALMGLLPSL*SCIIRD Trigger: GTCACGAATAATGCAGGATCACAAGGAAGGTAGTAG...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR TCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACTGGTCTGTTTCTGGATaGGTGTTTCCGTTAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDWSVSG*VFPLAD Trigger: ATCAGCTAACGGAAACACTCATCCAGAAACAGACCA...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR GCA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGAGATTGGACAGCTCCTaGGACCTGCTGCTACCGTCA | + |
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Preference number: 4 (lower is better) Translates to: YCLHLETLMGIGESQTPERLDSS*DLLLPS Trigger: TGACGGTAGCAGCAGGTCGCAGGAGCTGTCCAATCT...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR GCA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAAGGAGTACTTTCTTTCTaGCAGAGTAACTGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VLIFLQIPALDNGRHSWEGVLSF*QSNCFC Trigger: GCAGAAGCAGTTACTCTGGCAGAAAGAAAGTACTCC...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR GCA 90 bp | AGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCTCCGTCTCCAGCTCTTaGTTAGATGTCCTCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLSADLSADPSSGQWQALSVSSS*LDVLCL Trigger: TAAGCAGAGGACATCTAAGCAAGAGCTGGAGACGGA...GAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCGTACCTAGCTCTGACTGGCTaGTGTTGCTTAAAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGQWQALMGTSGSVHLPYLALTG*CCLKFC Trigger: ACAAAACTTTAAGCAACAGCAGCCAGTCAGAGCTAG...GTACGGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAAGCTTGACTTGCTGCTaGAGTTCATCAACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SADLSADPSSGQWQALMGSLTCC*SSSTFF Trigger: GAAGAAGGTTGATGAACTCCAGCAGCAAGTCAAGCT...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTCGGCCACTGCTTCGGTaGGGTCATCTACTTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRLKALHEETILCTVPSSRPLLR*GHLLAL Trigger: GAGCGCAAGTAGATGACCTCACCGAAGCAGTGGCCG...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAACGGCCACTGCTTCGGTaGGGTCATCTACTTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSERPLLR*GHLLAL Trigger: GAGCGCAAGTAGATGACCTCACCGAAGCAGTGGCCG...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAATGGCACTTGGGGCCGTaGTCTCCTCTGAGGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSEWHLGP*SPLRVP Trigger: AGGAACCCTCAGAGGAGAGCACGGCCCCAAGTGCCA...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | AGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCTGTAGCTTGACTTGCTaGTGGAGTTCATCAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSADLSADPSSGQWQALCSLTC*WSSSTF Trigger: GAAGGTTGATGAACTCCAGCAGCAAGTCAAGCTACA...GAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTCTTTAATCCTGCTTTaGAGTGTGTTCTTTGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LQIPALDNGRHSWEPVALSLILL*SVFFVL Trigger: TAGAACAAAGAACACACTGCAAAGCAGGATTAAAGA...CAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
||
| CDS-3UTR GCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACCTAGCTCTGACTGGCTaGTGTTGCTTAAAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDLALTG*CCLKFC Trigger: ACAAAACTTTAAGCAACAGCAGCCAGTCAGAGCTAG...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACGATTACAAACACTCGTaGTATGGGGTATCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDDYKHS*YGVSSE Trigger: CTCAGAAGATACCCCATAGCACGAGTGTTTGTAATC...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAGTTTCTTTGGATCTCTaGAGTAATGAGGCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SADLSADPSSGQWQALMGVSLDL*SNEAIS Trigger: GGAAATGGCCTCATTACTCCAGAGATCCAAAGAAAC...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACCTTTCTAGCTCTGACTaGCTGCTGTTGCTTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDLSSSD*LLLLKV Trigger: AACTTTAAGCAACAGCAGCCAGTCAGAGCTAGAAAG...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGAGTTCTTTTCTGTGCTaGGGCTCTCCAGCATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YCLHLETLMGIGESQTPESSFLC*GSPAWS Trigger: AGACCATGCTGGAGAGCCTCAGCACAGAAAAGAACT...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CCA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACCCAGTGGGCTCTTTTTaGGAACTGTTAAGAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: ARFLAVLVLIFLQIPALDPVGSF*ELLRKS Trigger: TGATTTTCTTAACAGTTCCCAAAAAGAGCCCACTGG...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CCA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGCTTCCACTCTCCCAGTaGGCTCTTTTTGGGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YCLHLETLMGIGESQTPELPLSQ*ALFGNC Trigger: ACAGTTCCCAAAAAGAGCCCACTGGGAGAGTGGAAG...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGTCTGAGGGTTCCTTATaGACTTCAGGCACAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: YCLHLETLMGIGESQTPESEGSL*TSGTES Trigger: GGATTCTGTGCCTGAAGTTCATAAGGAACCCTCAGA...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGTCATTCCTGAGCAACTaGTTCTCCAGTCGGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: YCLHLETLMGIGESQTPESFLSN*FSSRRL Trigger: CAATCTCCGACTGGAGAATCAGTTGCTCAGGAATGA...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTGTCCTTTGCGGCCACTaGTTCGGTGAGGTCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KRLKALHEETILCTVPSSVLCGH*FGEVIY Trigger: GTAGATGACCTCACCGAAGCAGTGGCCGCAAAGGAC...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTCTTTAATCCTGCTTTaGAGTGTGTTCTTTGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IPALDNGRHSWEPVALFTSLILL*SVFFVL Trigger: TAGAACAAAGAACACACTGCAAAGCAGGATTAAAGA...AGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
||
| CDS-3UTR TCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAATTGCCCTGTGTAGCTTaGCTTGCTGCTGGAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSELPCVA*LAAGVH Trigger: ATGAACTCCAGCAGCAAGTCAAGCTACACAGGGCAA...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAAGTGAGGTCATCTACTTaGGCTCGCAGTTCTCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSEVRSST*ARSSRV Trigger: AACTCGAGAACTGCGAGCGCAAGTAGATGACCTCAC...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAATGGATCTCCTCCTTCTaGATCTCCTTCTCATGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSEWISSF*ISFSCR Trigger: TCGGCATGAGAAGGAGATGCAGAAGGAGGAGATCCA...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGGATTACAAACACTCGTaGTATGGGGTATCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YCLHLETLMGIGESQTPEDYKHS*YGVSSE Trigger: CTCAGAAGATACCCCATAGCACGAGTGTTTGTAATC...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CCA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGCATCCCCGACTGTCCTaGATCCGACTTTCACGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNLSNYCLHLETLMGIGEHPRLS*IRLSRS Trigger: CGAACGTGAAAGTCGGATCCAGGACAGTCGGGGATG...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAAACTGGACTTCATTCCTaGGCAACTGATTCTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSETGLHS*ATDSPV Trigger: GACTGGAGAATCAGTTGCTCAGGAATGAAGTCCAGT...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGAATGAGGCCATTTCCTaGTTTAAAGACTGGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YCLHLETLMGIGESQTPENEAIS*FKDWTS Trigger: TGAAGTCCAGTCTTTAAATCAGGAAATGGCCTCATT...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGTCAGCAGTACGATCATaGCCCAGAGGTGCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNLSNYCLHLETLMGIGESAVRS*PRGAAK Trigger: CTTTGCTGCACCTCTGGGTCATGATCGTACTGCTGA...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTTTCTGCCAGAGTAACTaGTTCTGCCAAGTTCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: KRLKALHEETILCTVPSSFCQSN*FCQVLT Trigger: CGTCAGAACTTGGCAGAAGCAGTTACTCTGGCAGAA...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAACTGTGTAGCTTGACTTaGTGCTGGAGTTCATCAACC | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSELCSLT*CWSSST Trigger: GGTTGATGAACTCCAGCAGCAAGTCAAGCTACACAG...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAATCCGTCTCCAGCTCTTaGTTAGATGTCCTCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSESVSSS*LDVLCL Trigger: TAAGCAGAGGACATCTAAGCAAGAGCTGGAGACGGA...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CCA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGTTCCTCCGAACAAACTaGGATGAAGGCCTAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNLSNYCLHLETLMGIGEFLRTN*DEGLGA Trigger: TGCCCCTAGGCCTTCATCCCAGTTTGTTCGGAGGAA...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTTCCGGTCTGGTAATTTaGATCTGTGTTTTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRLKALHEETILCTVPSSSGLVI*ICVLLL Trigger: CAGCAGCAAAACACAGATTCAAATTACCAGACCGGA...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGTTGCCCTGTGTAGCTTaGCTTGCTGCTGGAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNLSNYCLHLETLMGIGELPCVA*LAAGVH Trigger: ATGAACTCCAGCAGCAAGTCAAGCTACACAGGGCAA...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAATGGTCTGTTTCTGGATaGGTGTTTCCGTTAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSEWSVSG*VFPLAD Trigger: ATCAGCTAACGGAAACACTCATCCAGAAACAGACCA...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAAGGAGTACTTTCTTTCTaGCAGAGTAACTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSEGVLSF*QSNCFC Trigger: GCAGAAGCAGTTACTCTGGCAGAAAGAAAGTACTCC...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAATGCATCTCCTTCTCATaGCGAAGTTCTTCCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSECISFS*RSSSNS Trigger: GGAATTGGAAGAACTTCGGCATGAGAAGGAGATGCA...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTTGCATCTCCTTCTCATaGCGAAGTTCTTCCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRLKALHEETILCTVPSSCISFS*RSSSNS Trigger: GGAATTGGAAGAACTTCGGCATGAGAAGGAGATGCA...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CCA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGGCTCTCTCTTTAGAGTaGCATCAGCTTCATGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNLSNYCLHLETLMGIGEALSLE*HQLHAA Trigger: GGCTGCATGAAGCTGATGCCACTCTAAAGAGAGAGC...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTAGCTTGACTTGCTGCTaGAGTTCATCAACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRLKALHEETILCTVPSSSLTCC*SSSTFF Trigger: GAAGAAGGTTGATGAACTCCAGCAGCAAGTCAAGCT...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGTTCTGCCAGAGTAACTaGTTCTGCCAAGTTCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LNLSNYCLHLETLMGIGEFCQSN*FCQVLT Trigger: CGTCAGAACTTGGCAGAAGCAGTTACTCTGGCAGAA...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAAGTTTCTTTGGATCTCTaGAGTAATGAGGCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSEVSLDL*SNEAIS Trigger: GGAAATGGCCTCATTACTCCAGAGATCCAAAGAAAC...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTCTTTCTAGCTCTGACTaGCTGCTGTTGCTTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLKALHEETILCTVPSSLSSSD*LLLLKV Trigger: AACTTTAAGCAACAGCAGCCAGTCAGAGCTAGAAAG...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGCTACTACCTTCCTTGTaGTCCTGCATTATTCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNLSNYCLHLETLMGIGELLPSL*SCIIRD Trigger: GTCACGAATAATGCAGGATCACAAGGAAGGTAGTAG...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGTGTAGCTTGACTTGCTaGTGGAGTTCATCAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNLSNYCLHLETLMGIGECSLTC*WSSSTF Trigger: GAAGGTTGATGAACTCCAGCAGCAAGTCAAGCTACA...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| 3UTR CAA 72 bp | GTTAAAAGATTAAAAGCTCTCCATGAAGAAACCATCTaGTGCACGGTTCCTAGCAGTCTTAGTGCTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKRLKALHEETI*CTVPSSLSADL Trigger: AAGATCAGCACTAAGACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR GCA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGCTAGCTCTGACTGGCTaGTGTTGCTTAAAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNLSNYCLHLETLMGIGELALTG*CCLKFC Trigger: ACAAAACTTTAAGCAACAGCAGCCAGTCAGAGCTAG...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR GCA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAATCTTTAATCCTGCTTTaGAGTGTGTTCTTTGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PQIAFSLSLYISRELNSESLILL*SVFFVL Trigger: TAGAACAAAGAACACACTGCAAAGCAGGATTAAAGA...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR TCA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGGATGTTATCAGCAGCTaGGGAAATATAGTTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNLSNYCLHLETLMGIGEDVISS*GNIVSF Trigger: AAAGCTAACTATATTTCCTCAGCTGCTGATAACATC...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS GCA 90 bp | GACAGCTCCTGCGACCTGCTGCTACCGTCACTAGGTGTAGAGCTGTaGTCCTCGCTGGTGGCACTTGGGGCCGTGCTCTCCTCTGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DSSCDLLLPSLGVEL*SSLVALGAVLSSEG Trigger: ACCCTCAGAGGAGAGCACGGCCCCAAGTGCCACCAGCGAGGAGCACAGCTCTACACCTAGTGACGGTAGCAGCAGGTCGCAGGAGCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS CCA 90 bp | GGCCCCGAGGAGGCAGAATGCACCTGCTGCTCAAGGCGCTCCAGCTaGAAGACCAGGGAGTTCTTTTCTGTGCTGAGGCTCTCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GPEEAECTCCSRRSS*KTREFFSVLRLSSM Trigger: CATGCTGGAGAGCCTCAGCACAGAAAAGAACTCCCTGGTCTTCCAGCTGGAGCGCCTTGAGCAGCAGGTGCATTCTGCCTCCTCGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
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| CDS GCA 90 bp | AGCCTCCTGCAGTCGCACTTTGAGGACAGCCAGCTGGGAGTCCTTTaGGGCCACTGCTTCGGTGAGGTCATCTACTTGCGCTCGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLQSHFEDSQLGVL*GHCFGEVIYLRSQF Trigger: GAACTGCGAGCGCAAGTAGATGACCTCACCGAAGCAGTGGCCGCAAAGGACTCCCAGCTGGCTGTCCTCAAAGTGCGACTGCAGGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 90 bp | GCTTCTAGTGCTTCTGTGCGGGAACTTAGCACCTGGTCAGCCTCCTaGAGTCGCACTTTGAGGACAGCCAGCTGGGAGTCCTTTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASSASVRELSTWSAS*SRTLRTASWESFAA Trigger: GGCCGCAAAGGACTCCCAGCTGGCTGTCCTCAAAGTGCGACTGCAGGAGGCTGACCAGGTGCTAAGTTCCCGCACAGAAGCACTAGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 90 bp | ATGGCAGATCCACTGTTGGGCCCCGAGGAGGCAGAATGCACCTGCTaGTCAAGGCGCTCCAGCTGGAAGACCAGGGAGTTCTTTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MADPLLGPEEAECTC*SRRSSWKTREFFSV Trigger: CACAGAAAAGAACTCCCTGGTCTTCCAGCTGGAGCGCCTTGAGCAGCAGGTGCATTCTGCCTCCTCGGGGCCCAACAGTGGATCTGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
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| CDS GCA 90 bp | GACATGTTAATGGCAGATCCACTGTTGGGCCCCGAGGAGGCAGAATaGACCTGCTGCTCAAGGCGCTCCAGCTGGAAGACCAGGGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DMLMADPLLGPEEAE*TCCSRRSSWKTREF Trigger: GAACTCCCTGGTCTTCCAGCTGGAGCGCCTTGAGCAGCAGGTGCATTCTGCCTCCTCGGGGCCCAACAGTGGATCTGCCATTAACATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
||
| CDS TCA 90 bp | AGAGCTGTGCTCCTCGCTGGTGGCACTTGGGGCCGTGCTCTCCTCTaGGGGTTCCTTATGAACTTCAGGCACAGAATCCGAACTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RAVLLAGGTWGRALL*GFLMNFRHRIRTVH Trigger: GTGAACAGTTCGGATTCTGTGCCTGAAGTTCATAAGGAACCCTCAGAGGAGAGCACGGCCCCAAGTGCCACCAGCGAGGAGCACAGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 90 bp | GGGTGGCATCCCCGACTGTCCTGGATCCGACTTTCACGTTCGCTGTaGCAGCTAGGATCGTGGCTTTCTGATGTCGGATGTTATCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GWHPRLSWIRLSRSL*QLGSWLSDVGCYQQ Trigger: CTGCTGATAACATCCGACATCAGAAAGCCACGATCCTAGCTGGCACAGCGAACGTGAAAGTCGGATCCAGGACAGTCGGGGATGCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 90 bp | CAGTCGCACTTTGAGGACAGCCAGCTGGGAGTCCTTTGCGGCCACTaGTTCGGTGAGGTCATCTACTTGCGCTCGCAGTTCTCGAGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: QSHFEDSQLGVLCGH*FGEVIYLRSQFSSY Trigger: ATAACTCGAGAACTGCGAGCGCAAGTAGATGACCTCACCGAAGCAGTGGCCGCAAAGGACTCCCAGCTGGCTGTCCTCAAAGTGCGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 90 bp | TTAATGGCAGATCCACTGTTGGGCCCCGAGGAGGCAGAATGCACCTaGTGCTCAAGGCGCTCCAGCTGGAAGACCAGGGAGTTCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LMADPLLGPEEAECT*CSRRSSWKTREFFS Trigger: AGAAAAGAACTCCCTGGTCTTCCAGCTGGAGCGCCTTGAGCAGCAGGTGCATTCTGCCTCCTCGGGGCCCAACAGTGGATCTGCCATTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
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| CDS TCA 90 bp | TCGCTGGTGGCACTTGGGGCCGTGCTCTCCTCTGAGGGTTCCTTATaGACTTCAGGCACAGAATCCGAACTGTTCACTCCAGGACTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLVALGAVLSSEGSL*TSGTESELFTPGLW Trigger: CCAAAGTCCTGGAGTGAACAGTTCGGATTCTGTGCCTGAAGTTCATAAGGAACCCTCAGAGGAGAGCACGGCCCCAAGTGCCACCAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAAGTTCACTCCAGGACTTaGGCTCCCAGCGTTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLIFLQIPALDNGRHSWEVHSRT*APSVSS Trigger: GGAGGAAACGCTGGGAGCCAAAGTCCTGGAGTGAAC...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAAGGTGAGGTCATCTACTaGCGCTCGCAGTTCTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VLIFLQIPALDNGRHSWEGEVIY*RSQFSS Trigger: ACTCGAGAACTGCGAGCGCAAGTAGATGACCTCACC...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | CTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGCAGGCGAATACTAAATaGGTCAATGGAGCTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQIPALDNGRHSWEPVALQANTK*VNGASS Trigger: GCTGCTAGCTCCATTGACCAATTTAGTATTCGCCTG...CAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS GCA 90 bp | AGCTGGGAGTCCTTTGCGGCCACTGCTTCGGTGAGGTCATCTACTTaGGCTCGCAGTTCTCGAGTTATGCGATCGCTCTTTGAATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWESFAATASVRSST*ARSSRVMRSLFELS Trigger: TGACAATTCAAAGAGCGATCGCATAACTCGAGAACTGCGAGCGCAAGTAGATGACCTCACCGAAGCAGTGGCCGCAAAGGACTCCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | CTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGGTCCGGTCTGGTAATTaGAATCTGTGTTTTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQIPALDNGRHSWEPVALVRSGN*NLCFAA Trigger: AGCAGCAAAACACAGATTCAAATTACCAGACCGGAC...CAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | CTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGCCCAGTGGGCTCTTTTaGGGAACTGTTAAGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LQIPALDNGRHSWEPVALPSGLF*GTVKKI Trigger: GATTTTCTTAACAGTTCCCAAAAAGAGCCCACTGGG...CAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACCTGCCCTTCTCTTTCTaGACTTCCACTCTCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARFLAVLVLIFLQIPALDLPFSF*TSTLPV Trigger: CACTGGGAGAGTGGAAGTCAAGAAAGAGAAGGGCAG...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | AGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCCTGCCCTTCTCTTTCTaGACTTCCACTCTCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSADLSADPSSGQWQALLPFSF*TSTLPV Trigger: CACTGGGAGAGTGGAAGTCAAGAAAGAGAAGGGCAG...GAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACGTGGTTACACTGGTGTaGACAGAACTGACACCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARFLAVLVLIFLQIPALDVVTLV*TELTPD Trigger: GTCAGGTGTCAGTTCTGTCAACACCAGTGTAACCAC...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAAGTGGTTACACTGGTGTaGACAGAACTGACACCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLIFLQIPALDNGRHSWEVVTLV*TELTPD Trigger: GTCAGGTGTCAGTTCTGTCAACACCAGTGTAACCAC...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGACGGTCCACTTCCATTTaGTTAAGGCGTGCAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SADLSADPSSGQWQALMGRSTSI*LRRAAN Trigger: GTTTGCTGCACGCCTTAACAAAATGGAAGTGGACCG...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS TCA 90 bp | AGGCTCTCCAGCATGGTCTGTTTCTGGATGAGTGTTTCCGTTAGCTaGTGGAGCCGGCTTTCTAGCTCTGACTGGCTGCTGTTGCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: RLSSMVCFWMSVSVS*WSRLSSSDWLLLLK Trigger: TTTAAGCAACAGCAGCCAGTCAGAGCTAGAAAGCCGGCTCCATCAGCTAACGGAAACACTCATCCAGAAACAGACCATGCTGGAGAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
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| CDS-3UTR CAA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGATTCATGCAGCCTCTCTaGAAGAGTTTGCAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SADLSADPSSGQWQALMGFMQPL*KSLQSL Trigger: CAAGCTCTGCAAACTCTTCAAGAGAGGCTGCATGAA...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | CAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCTTTGCAGTGTGTTCTTaGTTCTATGCAGATCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QIPALDNGRHSWEPVALFFAVCS*FYADPP Trigger: AGGAGGATCTGCATAGAACAAAGAACACACTGCAAA...GAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS-3UTR CAA 90 bp | CAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTTGCCTCTGACTGGCTGCTGTaGCTTAAAGTTTTGTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QLWTMAGTHGNQWLCSLASDWLL*LKVLLV Trigger: TACCAACAAAACTTTAAGCAACAGCAGCCAGTCAGA...GGCAAGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
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| CDS CCA 90 bp | CTGTCCTGGATCCGACTTTCACGTTCGCTGTGCCAGCTAGGATCGTaGCTTTCTGATGTCGGATGTTATCAGCAGCTGAGGAAATATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSWIRLSRSLCQLGS*LSDVGCYQQLRKYS Trigger: ACTATATTTCCTCAGCTGCTGATAACATCCGACATCAGAAAGCCACGATCCTAGCTGGCACAGCGAACGTGAAAGTCGGATCCAGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS-3UTR CAA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCCAGTGGGCTCTTTTaGGGAACTGTTAAGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: VLIFLQIPALDNGRHSWEPSGLF*GTVKKI Trigger: GATTTTCTTAACAGTTCCCAAAAAGAGCCCACTGGG...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGGGTGAGGTCATCTACTaGCGCTCGCAGTTCTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YCLHLETLMGIGESQTPEGEVIY*RSQFSS Trigger: ACTCGAGAACTGCGAGCGCAAGTAGATGACCTCACC...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 90 bp | CTTCTTCTCCTCGGAGTACTTTCTTTCTGCCAGAGTAACTGCTTCTaGCAAGTTCTGACGGTCCACTTCCATTTTGTTAAGGCGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLGVLSFCQSNCF*QVLTVHFHFVKACS Trigger: GCTGCACGCCTTAACAAAATGGAAGTGGACCGTCAGAACTTGGCAGAAGCAGTTACTCTGGCAGAAAGAAAGTACTCCGAGGAGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGCTTGCCCTGTGTAGCTaGACTTGCTGCTGGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YCLHLETLMGIGESQTPELALCS*TCCWSS Trigger: TGAACTCCAGCAGCAAGTCAAGCTACACAGGGCAAG...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS TCA 90 bp | TCGGAGTACTTTCTTTCTGCCAGAGTAACTGCTTCTGCCAAGTTCTaGCGGTCCACTTCCATTTTGTTAAGGCGTGCAGCAAACTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SEYFLSARVTASAKF*RSTSILLRRAANSL Trigger: GAGTGAGTTTGCTGCACGCCTTAACAAAATGGAAGTGGACCGTCAGAACTTGGCAGAAGCAGTTACTCTGGCAGAAAGAAAGTACTCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 90 bp | CTGGAGTTCATCAACCTTCTTCTTCTCCTCGGAGTACTTTCTTTCTaGCAGAGTAACTGCTTCTGCCAAGTTCTGACGGTCCACTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LEFINLLLLLGVLSF*QSNCFCQVLTVHFH Trigger: ATGGAAGTGGACCGTCAGAACTTGGCAGAAGCAGTTACTCTGGCAGAAAGAAAGTACTCCGAGGAGAAGAAGAAGGTTGATGAACTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTCACCTGACGGAGAACTaGGAGAGACAGGAGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KRLKALHEETILCTVPSSHLTEN*ERQELC Trigger: GCAGAGCTCCTGTCTCTCCAAGTTCTCCGTCAGGTG...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAACACCTGACGGAGAACTaGGAGAGACAGGAGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQIAFSLSLYISRELNSEHLTEN*ERQELC Trigger: GCAGAGCTCCTGTCTCTCCAAGTTCTCCGTCAGGTG...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGCGGTCCACTTCCATTTaGTTAAGGCGTGCAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YCLHLETLMGIGESQTPERSTSI*LRRAAN Trigger: GTTTGCTGCACGCCTTAACAAAATGGAAGTGGACCG...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACCAGTGGCTCTGTTCACTATCTTTAATCCTGCTTaGCAGTGTGTTCTTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IPALDNGRHSWEPVALFTIFNPA*QCVLCS Trigger: AGAACAAAGAACACACTGCAAAGCAGGATTAAAGAT...AGTGAACAGAGCCACTGGTTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222744.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCTCTGACTGGCTGCTGTaGCTTAAAGTTTTGTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLSADLSADPSSGQWQALSDWLL*LKVLLV Trigger: TACCAACAAAACTTTAAGCAACAGCAGCCAGTCAGA...GAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | GCACGGTTCCTAGCAGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACTTATGCGATCGCTCTTaGAATTGTCAACATTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: ARFLAVLVLIFLQIPALDLCDRS*NCQHSI Trigger: AATGGAATGTTGACAATTCAAAGAGCGATCGCATAA...GTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACTGCTAGGAACCGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGTTCATGCAGCCTCTCTaGAAGAGTTTGCAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YCLHLETLMGIGESQTPEFMQPL*KSLQSL Trigger: CAAGCTCTGCAAACTCTTCAAGAGAGGCTGCATGAA...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAACAGTTTTTCTTTAGATaGGAGTATCCGTGTAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLIFLQIPALDNGRHSWEQFFFR*EYPCSF Trigger: AAAGCTACACGGATACTCCAATCTAAAGAAAAACTG...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGCTAGGCCTTCAAAGCTaGAGCCTTCCTTTAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YCLHLETLMGIGESQTPELGLQS*SLPLSC Trigger: ACAGCTTAAAGGAAGGCTCAAGCTTTGAAGGCCTAG...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAATCTTTAATCCTGCTTaGCAGTGTGTTCTTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SADLSADPSSGQWQALMGIFNPA*QCVLCS Trigger: AGAACAAAGAACACACTGCAAAGCAGGATTAAAGAT...TCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | GTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCATGGGAAATCTTTAATCCTGCTTaGCAGTGTGTTCTTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLIFLQIPALDNGRHSWEIFNPA*QCVLCS Trigger: AGAACAAAGAACACACTGCAAAGCAGGATTAAAGAT...TTCCCATGAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS CCA 90 bp | ACTCACTCTGCATTTGTTTGTAGCTCTCTTGCTCTCTCTTTAGAGTaGCATCAGCTTCATGCAGCCTCTCTTGAAGAGTTTGCAGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: THSAFVCSSLALSLE*HQLHAASLEEFAEL Trigger: AAGCTCTGCAAACTCTTCAAGAGAGGCTGCATGAAGCTGATGCCACTCTAAAGAGAGAGCAAGAGAGCTACAAACAAATGCAGAGTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS CCA 90 bp | AGCTCCGTCTCCAGCTCTTGCTTAGATGTCCTCTGCTTAGCTATCTaGTCTTGCAGATCTTGTAATTGTTCTCTTGCTGATTCAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVSSSCLDVLCLAI*SCRSCNCSLADSAS Trigger: TGAAGCTGAATCAGCAAGAGAACAATTACAAGATCTGCAAGACCAGATAGCTAAGCAGAGGACATCTAAGCAAGAGCTGGAGACGGAGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
||
| CDS-3UTR CAA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGGTTCACTCCAGGACTTaGGCTCCCAGCGTTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNLSNYCLHLETLMGIGEVHSRT*APSVSS Trigger: GGAGGAAACGCTGGGAGCCAAAGTCCTGGAGTGAAC...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | AGTCTTAGTGCTGATCTTTCTGCAGATCCCAGCTCTGGACAATGGCAGGCACTCTTATGCGATCGCTCTTaGAATTGTCAACATTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SLSADLSADPSSGQWQALLCDRS*NCQHSI Trigger: AATGGAATGTTGACAATTCAAAGAGCGATCGCATAA...GAGTGCCTGCCATTGTCCAGAGCTGGGATCTGCAGAAAGATCAGCACTAAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTCTTGCCCTGTGTAGCTaGACTTGCTGCTGGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRLKALHEETILCTVPSSLALCS*TCCWSS Trigger: TGAACTCCAGCAGCAAGTCAAGCTACACAGGGCAAG...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 90 bp | GTCTCCAGCTCTTGCTTAGATGTCCTCTGCTTAGCTATCTGGTCTTaGAGATCTTGTAATTGTTCTCTTGCTGATTCAGCTTCACTAACC | + |
|
Preference number: 5 (lower is better) Translates to: VSSSCLDVLCLAIWS*RSCNCSLADSASLT Trigger: GGTTAGTGAAGCTGAATCAGCAAGAGAACAATTACAAGATCTGCAAGACCAGATAGCTAAGCAGAGGACATCTAAGCAAGAGCTGGAGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTCTAGGCCTTCAAAGCTaGAGCCTTCCTTTAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KRLKALHEETILCTVPSSLGLQS*SLPLSC Trigger: ACAGCTTAAAGGAAGGCTCAAGCTTTGAAGGCCTAG...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAACAGGCGAATACTAAATaGGTCAATGGAGCTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQIAFSLSLYISRELNSEQANTK*VNGASS Trigger: GCTGCTAGCTCCATTGACCAATTTAGTATTCGCCTG...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAGTCAGACACCAGAGCAGTTTTTCTTTAGATaGGAGTATCCGTGTAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YCLHLETLMGIGESQTPEQFFFR*EYPCSF Trigger: AAAGCTACACGGATACTCCAATCTAAAGAAAAACTG...CTCTGGTGTCTGACTCTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTAAACTCACTCTGCATTaGTTTGTAGCTCTCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KRLKALHEETILCTVPSSKLTLH*FVALLL Trigger: GAGCAAGAGAGCTACAAACAAATGCAGAGTGAGTTT...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAATTTGCAGTGTGTTCTTaGTTCTATGCAGATCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PQIAFSLSLYISRELNSEFAVCS*FYADPP Trigger: AGGAGGATCTGCATAGAACAAAGAACACACTGCAAA...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTTCTGACTGGCTGCTGTaGCTTAAAGTTTTGTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KRLKALHEETILCTVPSSSDWLL*LKVLLV Trigger: TACCAACAAAACTTTAAGCAACAGCAGCCAGTCAGA...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGATTAAAAGCTCTCCATGAAGAAACCATCTTGTGCACGGTTCCTAGCAGTCGATCGCTCTTTGAATaGTCAACATTCCATTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRLKALHEETILCTVPSSRSLFE*STFHFS Trigger: TGAAAAATGGAATGTTGACAATTCAAAGAGCGATCG...ACTGCTAGGAACCGTGCACAAGATGGTTTCTTCATGGAGAGCTTTTAATCTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | CCCCAAATCGCCTTTTCTCTTTCTCTATACATATCTAGGGAACTGAACTCAGAACGATCGCTCTTTGAATaGTCAACATTCCATTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PQIAFSLSLYISRELNSERSLFE*STFHFS Trigger: TGAAAAATGGAATGTTGACAATTCAAAGAGCGATCG...TTCTGAGTTCAGTTCCCTAGATATGTATAGAGAAAGAGAAAAGGCGATTTGGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS-3UTR CAA 90 bp | CTTAATTTGTCAAATTACTGTCTGCATTTAGAGACTCTTATGGGAATAGGGGAGAAACTCACTCTGCATTaGTTTGTAGCTCTCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LNLSNYCLHLETLMGIGEKLTLH*FVALLL Trigger: GAGCAAGAGAGCTACAAACAAATGCAGAGTGAGTTT...CTCCCCTATTCCCATAAGAGTCTCTAAATGCAGACAGTAATTTGACAAATTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 72 bp | GATCCACTGTTGGGCCCCGAGGAGGCAGAATGCACCTaGTGCTCAAGGCGCTCCAGCTGGAAGACCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DPLLGPEEAECT*CSRRSSWKTRE Trigger: CTCCCTGGTCTTCCAGCTGGAGCGCCTTGAGCAGCAGGTGCATTCTGCCTCCTCGGGGCCCAACAGTGGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
||
| CDS GCA 72 bp | ATGGCAGATCCACTGTTGGGCCCCGAGGAGGCAGAATaGACCTGCTGCTCAAGGCGCTCCAGCTGGAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: MADPLLGPEEAE*TCCSRRSSWKT Trigger: GGTCTTCCAGCTGGAGCGCCTTGAGCAGCAGGTGCATTCTGCCTCCTCGGGGCCCAACAGTGGATCTGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
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| CDS CCA 72 bp | GATGAAGGCCTAGGGGCAGACGCATGCTCGGTGGGATaGGTGGCATCCCCGACTGTCCTGGATCCGACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: DEGLGADACSVG*VASPTVLDPTF Trigger: GAAAGTCGGATCCAGGACAGTCGGGGATGCCACCCATCCCACCGAGCATGCGTCTGCCCCTAGGCCTTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS CAA 90 bp | TCTGTGCGGGAACTTAGCACCTGGTCAGCCTCCTGCAGTCGCACTTaGAGGACAGCCAGCTGGGAGTCCTTTGCGGCCACTGCTTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SVRELSTWSASCSRT*RTASWESFAATASV Trigger: CACCGAAGCAGTGGCCGCAAAGGACTCCCAGCTGGCTGTCCTCAAAGTGCGACTGCAGGAGGCTGACCAGGTGCTAAGTTCCCGCACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS GCA 72 bp | GCTTCTGTGCGGGAACTTAGCACCTGGTCAGCCTCCTaGAGTCGCACTTTGAGGACAGCCAGCTGGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASVRELSTWSAS*SRTLRTASWES Trigger: GGACTCCCAGCTGGCTGTCCTCAAAGTGCGACTGCAGGAGGCTGACCAGGTGCTAAGTTCCCGCACAGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS CCA 72 bp | TCAGCCTCCTGCAGTCGCACTTTGAGGACAGCCAGCTaGGAGTCCTTTGCGGCCACTGCTTCGGTGAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SASCSRTLRTAS*ESFAATASVRS Trigger: TGACCTCACCGAAGCAGTGGCCGCAAAGGACTCCCAGCTGGCTGTCCTCAAAGTGCGACTGCAGGAGGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS TCA 72 bp | AACTTAGCACCTGGTCAGCCTCCTGCAGTCGCACTTTaGGGACAGCCAGCTGGGAGTCCTTTGCGGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: NLAPGQPPAVAL*GQPAGSPLRPL Trigger: CAGTGGCCGCAAAGGACTCCCAGCTGGCTGTCCTCAAAGTGCGACTGCAGGAGGCTGACCAGGTGCTAAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS CAA 72 bp | GAACTTAGCACCTGGTCAGCCTCCTGCAGTCGCACTTaGAGGACAGCCAGCTGGGAGTCCTTTGCGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: ELSTWSASCSRT*RTASWESFAAT Trigger: AGTGGCCGCAAAGGACTCCCAGCTGGCTGTCCTCAAAGTGCGACTGCAGGAGGCTGACCAGGTGCTAAGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS TCA 72 bp | CTCCTCGCTGGTGGCACTTGGGGCCGTGCTCTCCTCTaGGGGTTCCTTATGAACTTCAGGCACAGAATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LLAGGTWGRALL*GFLMNFRHRIR Trigger: TCGGATTCTGTGCCTGAAGTTCATAAGGAACCCTCAGAGGAGAGCACGGCCCCAAGTGCCACCAGCGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS TCA 72 bp | CAGCCAGCTGGGAGTCCTTTGCGGCCACTGCTTCGGTaGGGTCATCTACTTGCGCTCGCAGTTCTCGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: QPAGSPLRPLLR*GHLLALAVLEL Trigger: TAACTCGAGAACTGCGAGCGCAAGTAGATGACCTCACCGAAGCAGTGGCCGCAAAGGACTCCCAGCTGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 72 bp | TTTGAGGACAGCCAGCTGGGAGTCCTTTGCGGCCACTaGTTCGGTGAGGTCATCTACTTGCGCTCGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FEDSQLGVLCGH*FGEVIYLRSQF Trigger: GAACTGCGAGCGCAAGTAGATGACCTCACCGAAGCAGTGGCCGCAAAGGACTCCCAGCTGGCTGTCCTCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS CCA 72 bp | AAGGCTTCTAGTGCTTCTGTGCGGGAACTTAGCACCTaGTCAGCCTCCTGCAGTCGCACTTTGAGGACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KASSASVRELST*SASCSRTLRTA Trigger: GGCTGTCCTCAAAGTGCGACTGCAGGAGGCTGACCAGGTGCTAAGTTCCCGCACAGAAGCACTAGAAGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS CAA 72 bp | TTCAGGCACAGAATCCGAACTGTTCACTCCAGGACTTaGGCTCCCAGCGTTTCCTCCCATGGCCTTGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FRHRIRTVHSRT*APSVSSHGLGG Trigger: ACCACCAAGGCCATGGGAGGAAACGCTGGGAGCCAAAGTCCTGGAGTGAACAGTTCGGATTCTGTGCCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS CAA 72 bp | GTCCTTTGCGGCCACTGCTTCGGTGAGGTCATCTACTaGCGCTCGCAGTTCTCGAGTTATGCGATCGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLCGHCFGEVIY*RSQFSSYAIAL Trigger: AAGAGCGATCGCATAACTCGAGAACTGCGAGCGCAAGTAGATGACCTCACCGAAGCAGTGGCCGCAAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS TCA 72 bp | GCACTTGGGGCCGTGCTCTCCTCTGAGGGTTCCTTATaGACTTCAGGCACAGAATCCGAACTGTTCACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALGAVLSSEGSL*TSGTESELFTP Trigger: TGGAGTGAACAGTTCGGATTCTGTGCCTGAAGTTCATAAGGAACCCTCAGAGGAGAGCACGGCCCCAAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 72 bp | TCCTTTGCGGCCACTGCTTCGGTGAGGTCATCTACTTaGGCTCGCAGTTCTCGAGTTATGCGATCGCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SFAATASVRSST*ARSSRVMRSLF Trigger: AAAGAGCGATCGCATAACTCGAGAACTGCGAGCGCAAGTAGATGACCTCACCGAAGCAGTGGCCGCAAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS TCA 72 bp | AGCATGGTCTGTTTCTGGATGAGTGTTTCCGTTAGCTaGTGGAGCCGGCTTTCTAGCTCTGACTGGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SMVCFWMSVSVS*WSRLSSSDWLL Trigger: CAGCAGCCAGTCAGAGCTAGAAAGCCGGCTCCATCAGCTAACGGAAACACTCATCCAGAAACAGACCATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
||
| CDS CCA 72 bp | ATCCGACTTTCACGTTCGCTGTGCCAGCTAGGATCGTaGCTTTCTGATGTCGGATGTTATCAGCAGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRLSRSLCQLGS*LSDVGCYQQLR Trigger: CCTCAGCTGCTGATAACATCCGACATCAGAAAGCCACGATCCTAGCTGGCACAGCGAACGTGAAAGTCGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS CCA 72 bp | GACTCCAAGCTTGCCCTGTGTAGCTTGACTTGCTGCTaGAGTTCATCAACCTTCTTCTTCTCCTCGGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: DSKLALCSLTCC*SSSTFFFSSEY Trigger: GTACTCCGAGGAGAAGAAGAAGGTTGATGAACTCCAGCAGCAAGTCAAGCTACACAGGGCAAGCTTGGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS CAA 72 bp | GAACTTGGAGAGACAGGAGCTCTGCCCTTCTCTTTCTaGACTTCCACTCTCCCAGTGGGCTCTTTTTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ELGETGALPFSF*TSTLPVGSFWE Trigger: TTCCCAAAAAGAGCCCACTGGGAGAGTGGAAGTCAAGAAAGAGAAGGGCAGAGCTCCTGTCTCTCCAAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS CAA 90 bp | GTAGCGGAATTCCTGCTTCATTCGTTCCAGCTCCGTCTCCAGCTCTaGCTTAGATGTCCTCTGCTTAGCTATCTGGTCTTGCAGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VAEFLLHSFQLRLQL*LRCPLLSYLVLQIL Trigger: CAAGATCTGCAAGACCAGATAGCTAAGCAGAGGACATCTAAGCAAGAGCTGGAGACGGAGCTGGAACGAATGAAGCAGGAATTCCGCTAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
||
| CDS CAA 72 bp | TTCCTGCTTCATTCGTTCCAGCTCCGTCTCCAGCTCTaGCTTAGATGTCCTCTGCTTAGCTATCTGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FLLHSFQLRLQL*LRCPLLSYLVL Trigger: CAAGACCAGATAGCTAAGCAGAGGACATCTAAGCAAGAGCTGGAGACGGAGCTGGAACGAATGAAGCAGGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
||
| CDS TCA 72 bp | TTTCTTTCTGCCAGAGTAACTGCTTCTGCCAAGTTCTaGCGGTCCACTTCCATTTTGTTAAGGCGTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FLSARVTASAKF*RSTSILLRRAA Trigger: TGCTGCACGCCTTAACAAAATGGAAGTGGACCGTCAGAACTTGGCAGAAGCAGTTACTCTGGCAGAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
||
| CDS GCA 72 bp | CTTCTCCTCGGAGTACTTTCTTTCTGCCAGAGTAACTaGTTCTGCCAAGTTCTGACGGTCCACTTCCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLGVLSFCQSN*FCQVLTVHFHF Trigger: AAAATGGAAGTGGACCGTCAGAACTTGGCAGAAGCAGTTACTCTGGCAGAAAGAAAGTACTCCGAGGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS GCA 72 bp | ATCAACCTTCTTCTTCTCCTCGGAGTACTTTCTTTCTaGCAGAGTAACTGCTTCTGCCAAGTTCTGACGGTC | + |
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Preference number: 6 (lower is better) Translates to: INLLLLLGVLSF*QSNCFCQVLTV Trigger: GACCGTCAGAACTTGGCAGAAGCAGTTACTCTGGCAGAAAGAAAGTACTCCGAGGAGAAGAAGAAGGTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS GCA 72 bp | TCCAGCTCCGTCTCCAGCTCTTGCTTAGATGTCCTCTaGTTAGCTATCTGGTCTTGCAGATCTTGTAATTGT | + |
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Preference number: 6 (lower is better) Translates to: SSSVSSSCLDVL*LAIWSCRSCNC Trigger: ACAATTACAAGATCTGCAAGACCAGATAGCTAAGCAGAGGACATCTAAGCAAGAGCTGGAGACGGAGCTGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
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| CDS GCA 72 bp | CAAGTTCTGACGGTCCACTTCCATTTTGTTAAGGCGTaGAGCAAACTCACTCTGCATTTGTTTGTAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: QVLTVHFHFVKA*SKLTLHLFVAL Trigger: GAGAGCTACAAACAAATGCAGAGTGAGTTTGCTGCACGCCTTAACAAAATGGAAGTGGACCGTCAGAACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS CCA 72 bp | GCATTTGTTTGTAGCTCTCTTGCTCTCTCTTTAGAGTaGCATCAGCTTCATGCAGCCTCTCTTGAAGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: AFVCSSLALSLE*HQLHAASLEEF Trigger: AAACTCTTCAAGAGAGGCTGCATGAAGCTGATGCCACTCTAAAGAGAGAGCAAGAGAGCTACAAACAAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS CCA 72 bp | TCCAGCTCTTGCTTAGATGTCCTCTGCTTAGCTATCTaGTCTTGCAGATCTTGTAATTGTTCTCTTGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SSSCLDVLCLAI*SCRSCNCSLAD Trigger: ATCAGCAAGAGAACAATTACAAGATCTGCAAGACCAGATAGCTAAGCAGAGGACATCTAAGCAAGAGCTGGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
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| CDS CAA 72 bp | GCTCGCAGTTCTCGAGTTATGCGATCGCTCTTTGAATaGTCAACATTCCATTTTTCAACTCTTACTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: ARSSRVMRSLFE*STFHFSTLTLA Trigger: GGCAAGAGTAAGAGTTGAAAAATGGAATGTTGACAATTCAAAGAGCGATCGCATAACTCGAGAACTGCGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS GCA 72 bp | TCTTGCTTAGATGTCCTCTGCTTAGCTATCTGGTCTTaGAGATCTTGTAATTGTTCTCTTGCTGATTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SCLDVLCLAIWS*RSCNCSLADSA Trigger: AGCTGAATCAGCAAGAGAACAATTACAAGATCTGCAAGACCAGATAGCTAAGCAGAGGACATCTAAGCAAGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
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| CDS CAA 90 bp | ATTCCTCAGTTTTTGAATTTCTTCCTCCCTATCTTTAATCCTGCTTaGCAGTGTGTTCTTTGTTCTATGCAGATCCTCCTCCATGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: IPQFLNFFLPIFNPA*QCVLCSMQILLHVA Trigger: CGCTACATGGAGGAGGATCTGCATAGAACAAAGAACACACTGCAAAGCAGGATTAAAGATAGGGAGGAAGAAATTCAAAAACTGAGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 ENSMUST00000222744.2 |
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| CDS TCA 72 bp | GGAAATATAGTTAGCTTTCTGTCCGGTCTGGTAATTTaGATCTGTGTTTTGCTGCTGAAGTTCAGGATAGTC | + |
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Preference number: 6 (lower is better) Translates to: GNIVSFLSGLVI*ICVLLLKFRIV Trigger: GACTATCCTGAACTTCAGCAGCAAAACACAGATTCAAATTACCAGACCGGACAGAAAGCTAACTATATTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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| CDS CAA 72 bp | TCTAGGCCTTCAAAGCTTGAGCCTTCCTTTAAGCTGTaGATCAGTTTTTCTTTAGATTGGAGTATCCGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SRPSKLEPSFKL*ISFSLDWSIRV Trigger: TACACGGATACTCCAATCTAAAGAAAAACTGATCAACAGCTTAAAGGAAGGCTCAAGCTTTGAAGGCCTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021609.10 ENSMUST00000179218.9 |
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