Pregenerated sensors for GNS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034707Ensembl transcript IDs: ENSMUST00000040344.7, ENSMUST00000219249.2, ENSMUST00000219505.2, ENSMUST00000219851.2
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGTTTCTCCACAAGGTCGTCAACTGAGAGCAGGGTTTGCCACCTaGAGGACACAGGTGGAAGGCCCGTCAGGGGCAACGGCCACACAG | + |
|
Preference number: 1 (lower is better) Translates to: PVSPQGRQLRAGFAT*RTQVEGPSGATATQ Trigger: CTGTGTGGCCGTTGCCCCTGACGGGCCTTCCACCTGTGTCCTCCAGGTGGCAAACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| 3UTR GCA 90 bp | CTCTTCACCAGTTTCTCCACAAGGTCGTCAACTGAGAGCAGGGTTTaGCACCTGGAGGACACAGGTGGAAGGCCCGTCAGGGGCAACGGC | + |
|
Preference number: 1 (lower is better) Translates to: LFTSFSTRSSTESRV*HLEDTGGRPVRGNG Trigger: GCCGTTGCCCCTGACGGGCCTTCCACCTGTGTCCTCCAGGTGGCAAACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| 3UTR CCA 90 bp | CGACGACAGGCTGGAACCGAGTTTCGCCACTCCGTGCTGCCTCTGTaGACGTCAGGGTGGAACTGGACTTTAAGGAACAGAGTGCCGTCC | + |
|
Preference number: 1 (lower is better) Translates to: RRQAGTEFRHSVLPL*TSGWNWTLRNRVPS Trigger: GGACGGCACTCTGTTCCTTAAAGTCCAGTTCCACCCTGACGTCCACAGAGGCAGCACGGAGTGGCGAAACTCGGTTCCAGCCTGTCGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR TCA 90 bp | GGTCGAGTCCAGTCTCTTCACCAGTTTCTCCACAAGGTCGTCAACTaGGAGCAGGGTTTGCCACCTGGAGGACACAGGTGGAAGGCCCGT | + |
|
Preference number: 1 (lower is better) Translates to: GRVQSLHQFLHKVVN*EQGLPPGGHRWKAR Trigger: ACGGGCCTTCCACCTGTGTCCTCCAGGTGGCAAACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAGACTGGACTCGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| 3UTR GCA 90 bp | CAAGTTAAAGCTGGGCAGAGGCTGTGTAAAGCTAAACCCGCTCACTaGCGACGACAGGCTGGAACCGAGTTTCGCCACTCCGTGCTGCCT | + |
|
Preference number: 1 (lower is better) Translates to: QVKAGQRLCKAKPAH*RRQAGTEFRHSVLP Trigger: AGGCAGCACGGAGTGGCGAAACTCGGTTCCAGCCTGTCGTCGGCAGTGAGCGGGTTTAGCTTTACACAGCCTCTGCCCAGCTTTAACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR TCA 90 bp | CCAGACTCGACCACGTGGGGACTCATATACTGTGCCCAGCCAAGATaGAGGGACAAGGAGAGGACAAAGACCTCAGGAGTGGTGGTTGTC | + |
|
Preference number: 1 (lower is better) Translates to: PDSTTWGLIYCAQPR*RDKERTKTSGVVVV Trigger: GACAACCACCACTCCTGAGGTCTTTGTCCTCTCCTTGTCCCTTCATCTTGGCTGGGCACAGTATATGAGTCCCCACGTGGTCGAGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR GCA 90 bp | ACCGACTTGAGGATGGCCGGGAAGGTGTACGGCTCCTGGATCTTCTaGCAGGCCTTGCTACTGCAGTTCCCTTCCAAAGTGTTGTTAACG | + |
|
Preference number: 1 (lower is better) Translates to: TDLRMAGKVYGSWIF*QALLLQFPSKVLLT Trigger: CGTTAACAACACTTTGGAAGGGAACTGCAGTAGCAAGGCCTGGCAGAAGATCCAGGAGCCGTACACCTTCCCGGCCATCCTCAAGTCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR CCA 90 bp | GCCTTGCTACTGCAGTTCCCTTCCAAAGTGTTGTTAACGACGTGGTaGTTGTGGGGGTACTTTCCAGTCAGGATGCTGGCTCTGCTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: ALLLQFPSKVLLTTW*LWGYFPVRMLALLG Trigger: CCCCAGCAGAGCCAGCATCCTGACTGGAAAGTACCCCCACAACCACCACGTCGTTAACAACACTTTGGAAGGGAACTGCAGTAGCAAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR CCA 90 bp | CAGGCCTTGCTACTGCAGTTCCCTTCCAAAGTGTTGTTAACGACGTaGTGGTTGTGGGGGTACTTTCCAGTCAGGATGCTGGCTCTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: QALLLQFPSKVLLTT*WLWGYFPVRMLALL Trigger: CAGCAGAGCCAGCATCCTGACTGGAAAGTACCCCCACAACCACCACGTCGTTAACAACACTTTGGAAGGGAACTGCAGTAGCAAGGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR TCA 90 bp | CAGGCTCCACCACTGAGCATCCCAGAACACAGTAAGTCCTCCTCCTaGAGGCGTCATCTAAGAACCGTATTGACGAGTTCGTCATGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: QAPPLSIPEHSKSSS*RRHLRTVLTSSSWE Trigger: CTCCCATGACGAACTCGTCAATACGGTTCTTAGATGACGCCTTCAGGAGGAGGACTTACTGTGTTCTGGGATGCTCAGTGGTGGAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| 3UTR GCA 90 bp | AACCCAGGACACCCATCAGTCCCGCGGCCATCAGCTGATACCCCTTaGTTTGTCTTGAGGATTCTGGGCTGCCATCTTCCATTAGAAAAC | + |
|
Preference number: 1 (lower is better) Translates to: NPGHPSVPRPSADTP*FVLRILGCHLPLEN Trigger: GTTTTCTAATGGAAGATGGCAGCCCAGAATCCTCAAGACAAAGCAAGGGGTATCAGCTGATGGCCGCGGGACTGATGGGTGTCCTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR TCA 90 bp | AGGAGTGGTGGTTGTCATCTGAGGAGAAACAGGGTCAGCCACTTCTaGCAGGGGCGGATTCACAGTACTGGAAGTCAGCTGACTGGATTA | + |
|
Preference number: 1 (lower is better) Translates to: RSGGCHLRRNRVSHF*QGRIHSTGSQLTGL Trigger: TAATCCAGTCAGCTGACTTCCAGTACTGTGAATCCGCCCCTGTCAGAAGTGGCTGACCCTGTTTCTCCTCAGATGACAACCACCACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR CCA 90 bp | CCAGGGAATCATGTGACTCAGGCCACTAATGGCAGGAGAACCACCTaGGACGAGGTGACTCACCAGCCTTTCGTTAGAGACAAATCATCT | + |
|
Preference number: 1 (lower is better) Translates to: PGNHVTQATNGRRTT*DEVTHQPFVRDKSS Trigger: AGATGATTTGTCTCTAACGAAAGGCTGGTGAGTCACCTCGTCCCAGGTGGTTCTCCTGCCATTAGTGGCCTGAGTCACATGATTCCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR TCA 90 bp | GTCAGTTTTAATTCATTGAGAAGTGCAGCAGTGAACAGGGTCCGTTaGAGGGCACTTTCTAAGGGAGCGGCTGAGATGACAGCTCCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: VSFNSLRSAAVNRVR*RALSKGAAEMTAPG Trigger: GCCTGGAGCTGTCATCTCAGCCGCTCCCTTAGAAAGTGCCCTTCAACGGACCCTGTTCACTGCTGCACTTCTCAATGAATTAAAACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR GCA 90 bp | AACATCTGTCAGGTAGTCCACGCTGTAGTTCTCGCCGTGCTTCCGTaGCTTCCCGTTGATGGAGAGGGTGTAGTTATAGTATTTAGAATT | + |
|
Preference number: 1 (lower is better) Translates to: NICQVVHAVVLAVLP*LPVDGEGVVIVFRI Trigger: AATTCTAAATACTATAACTACACCCTCTCCATCAACGGGAAGGCACGGAAGCACGGCGAGAACTACAGCGTGGACTACCTGACAGATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219249.2 |
||
| 3UTR TCA 90 bp | CGGGCGCTGGCAATTCAGAAGGTGTTTGCAACAGTACCAACTTGTTaGACTCAAAGACACTCTAATGTGTACCCTACTTTGAAATTGTAT | + |
|
Preference number: 1 (lower is better) Translates to: RALAIQKVFATVPTC*TQRHSNVYPTLKLY Trigger: ATACAATTTCAAAGTAGGGTACACATTAGAGTGTCTTTGAGTTCAACAAGTTGGTACTGTTGCAAACACCTTCTGAATTGCCAGCGCCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR TCA 90 bp | CAGCTTTCACTATTTCACTGGTCATGTTTAGAATCCAAGTGGGGGTaGATGAAGCCGGTATCCACATTCAATTCTGTAACTTTTAGTTTA | + |
|
Preference number: 1 (lower is better) Translates to: QLSLFHWSCLESKWG*MKPVSTFNSVTFSL Trigger: TAAACTAAAAGTTACAGAATTGAATGTGGATACCGGCTTCATTCACCCCCACTTGGATTCTAAACATGACCAGTGAAATAGTGAAAGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR TCA 90 bp | AGGAACAGAGTGCCGTCCAGGGCATCTGGGAAGCCGGCCAGGGGAATACTGACTTGTGCCCAGCCAAGATaGAGGGACAAGGAGAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: RNRVPSRASGKPARGILTCAQPR*RDKERT Trigger: TGTCCTCTCCTTGTCCCTTCATCTTGGCTGGGCACA...AGTCAGTATTCCCCTGGCCGGCTTCCCAGATGCCCTGGACGGCACTCTGTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR CCA 90 bp | CCGTCCAGGGCATCTGGGAAGCCGGCCAGGGGAATACTGACTGGAGCCCTAGTTCAAAGACCTCAGGAGTaGTGGTTGTCATCTGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: PSRASGKPARGILTGALVQRPQE*WLSSEE Trigger: CTCCTCAGATGACAACCACCACTCCTGAGGTCTTTG...AACTAGGGCTCCAGTCAGTATTCCCCTGGCCGGCTTCCCAGATGCCCTGGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGCCTTCAAAGGAGATGTCAAAATGCTGAGTACAGAGAACAGGGCCGGCCTTGTGAGATCAGGGAGTaGGGTGAGGCAGCCGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PGLQRRCQNAEYREQGRPCEIRE*GEAAGP Trigger: AGGACCGGCTGCCTCACCCCACTCCCTGATCTCACA...AGGCCGGCCCTGTTCTCTGTACTCAGCATTTTGACATCTCCTTTGAAGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR CCA 90 bp | GGGGGATGTGCTCCAGTCCGCCTGCGTCTGGGGCTCCATACTCGTTTAAATACTTTCCAGTCAGGATGCTaGCTCTGCTGGGGCAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GGCAPVRLRLGLHTRLNTFQSGC*LCWGSK Trigger: TTTGCTGCCCCAGCAGAGCCAGCATCCTGACTGGAA...AGTATTTAAACGAGTATGGAGCCCCAGACGCAGGCGGACTGGAGCACATCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTAGTTCTCGCCGTGCTTCCGTGCCTTCCCGTTGATGGAGAGGGTGTAGTTAAGGTGTACGGCTCCTaGATCTTCTGCCAGGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: AVVLAVLPCLPVDGEGVVKVYGS*IFCQAL Trigger: CAAGGCCTGGCAGAAGATCCAGGAGCCGTACACCTT...AACTACACCCTCTCCATCAACGGGAAGGCACGGAAGCACGGCGAGAACTACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219249.2 |
||
| 3UTR-3UTR GCA 90 bp | CCGTCCAGGGCATCTGGGAAGCCGGCCAGGGGAATACTGACTGGAGCCCTAGTTGGGCTCGGTGTGAAATaGTATACAGTGCTTTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: PSRASGKPARGILTGALVGLGVK*YTVLLI Trigger: AATCAAAAGCACTGTATAGCATTTCACACCGAGCCC...AACTAGGGCTCCAGTCAGTATTCCCCTGGCCGGCTTCCCAGATGCCCTGGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGTATGGGGCCCCGTCTAGTCATTCAGTTCCATAGCCACTTACCAGGGCATAAGGTGTACGGCTCCTaGATCTTCTGCCAGGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: CSMGPRLVIQFHSHLPGHKVYGS*IFCQAL Trigger: CAAGGCCTGGCAGAAGATCCAGGAGCCGTACACCTT...ATGCCCTGGTAAGTGGCTATGGAACTGAATGACTAGACGGGGCCCCATACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTGGAACACTTGTGCAGTATGGGGCCCCGTCTAGTCATTCAGTTCCATAGCTCTTCTGCCAGGCCTTaGTACTGCAGTTCCCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LVEHLCSMGPRLVIQFHSSSARP*YCSSLP Trigger: TGGAAGGGAACTGCAGTAGCAAGGCCTGGCAGAAGA...GCTATGGAACTGAATGACTAGACGGGGCCCCATACTGCACAAGTGTTCCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGATGTCAAAATGCTGAGTACAGAGAACAGGGCCGGCCTCCTGCAGTGCATCCACTCTACTGCCTGCTaGCCTCTCAGTATCACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GDVKMLSTENRAGLLQCIHSTAC*PLSITK Trigger: TTTGGTGATACTGAGAGGCCAGCAGGCAGTAGAGTG...GATGCACTGCAGGAGGCCGGCCCTGTTCTCTGTACTCAGCATTTTGACATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCCAGACCTGAGTTTCGCCACTCCGTaGTGCCTCTGTGGACGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LSGAGYKTEDSNISIPDLSFATP*CLCGRQ Trigger: CTGACGTCCACAGAGGCAGCACGGAGTGGCGAAACT...CAGGTCTGGGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTGTTAATCCGTGCTGTTTTAAAAGCCAGACGTGGCTCAAGAAGACCAGGGACGACGTGGTGGTTGTaGGGGTACTTTCCAGTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ALLIRAVLKARRGSRRPGTTWWL*GYFPVR Trigger: CCTGACTGGAAAGTACCCCCACAACCACCACGTCGT...CCCTGGTCTTCTTGAGCCACGTCTGGCTTTTAAAACAGCACGGATTAACAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAACAGAGTGCCGTCCAGGGCATCTGGGAAGCCGGCCAGGGGAATACTGACTTCTGCCCTAAAGTATTaGCATTATCAGAAGAGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RNRVPSRASGKPARGILTSALKY*HYQKSF Trigger: AAAACTCTTCTGATAATGGCAATACTTTAGGGCAGA...AGTCAGTATTCCCCTGGCCGGCTTCCCAGATGCCCTGGACGGCACTCTGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR TCA 90 bp | CTGCATTCCATGTTGGTTTTAATGGTTCTCCCTTTGAAGAGCACTGGTACACATAGGGTCAGCCACTTCTaGCAGGGGCGGATTCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: LHSMLVLMVLPLKSTGTHRVSHF*QGRIHS Trigger: ACTGTGAATCCGCCCCTGTCAGAAGTGGCTGACCCT...ATGTGTACCAGTGCTCTTCAAAGGGAGAACCATTAAAACCAACATGGAATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR TCA 90 bp | CTGCATTCCATGTTGGTTTTAATGGTTCTCCCTTTGAAGAGCACTGGTACACATTGTGTTACCTCCATCTaGGGGCCTCGAGGTAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: LHSMLVLMVLPLKSTGTHCVTSI*GPRGRT Trigger: TGTCCTACCTCGAGGCCCTCAGATGGAGGTAACACA...ATGTGTACCAGTGCTCTTCAAAGGGAGAACCATTAAAACCAACATGGAATGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCCAGACCTGGGGACTCATATACTGTaGCCAGCCAAGATGAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSGAGYKTEDSNISIPDLGTHIL*PAKMKG Trigger: TCCCTTCATCTTGGCTGGGCACAGTATATGAGTCCC...CAGGTCTGGGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR TCA 90 bp | ATGACAGCTCCAGGCAGAGGAACTTCTACAACAGCTGATGAGAATTTACAAAGTCCAAGTGGGGGTGAATaGAGCCGGTATCCACATTCA | + |
|
Preference number: 2 (lower is better) Translates to: MTAPGRGTSTTADENLQSPSGGE*SRYPHS Trigger: TGAATGTGGATACCGGCTTCATTCACCCCCACTTGG...ACTTTGTAAATTCTCATCAGCTGTTGTAGAAGTTCCTCTGCCTGGAGCTGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCCAGACCTGGTTGCTGGGGTCACATaGGGTAAAGGAATAAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSGAGYKTEDSNISIPDLVAGVT*GKGINS Trigger: TGAGTTTATTCCTTTACCTCATGTGACCCCAGCAAC...CAGGTCTGGGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR CCA 90 bp | AACTGTGGTCAGCTTTCACTATTTCACTGGTCATGTTTAGAATCCAAGTGGGGGACGTCAGGGTGGAACTaGACTTTAAGGAACAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NCGQLSLFHWSCLESKWGTSGWN*TLRNRV Trigger: CACTCTGTTCCTTAAAGTCCAGTTCCACCCTGACGT...CCCCCACTTGGATTCTAAACATGACCAGTGAAATAGTGAAAGCTGACCACAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR GCA 72 bp | GCCGACGACAGGCTGGAACCGAGTTTCGCCACTCCGTaGTGCCTCTGTGGACGTCAGGGTGGAACTGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: ADDRLEPSFATP*CLCGRQGGTGL Trigger: AAGTCCAGTTCCACCCTGACGTCCACAGAGGCAGCACGGAGTGGCGAAACTCGGTTCCAGCCTGTCGTCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGCATACCAGTAACTCCAGCCCAGGGGGATGTGCTCCAGTCCGCCTGCGTTTAACGACGTGGTGGTaGTGGGGGTACTTTCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PGHTSNSSPGGCAPVRLRLTTWW*WGYFPV Trigger: GACTGGAAAGTACCCCCACAACCACCACGTCGTTAA...ACGCAGGCGGACTGGAGCACATCCCCCTGGGCTGGAGTTACTGGTATGCCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR TCA 72 bp | GCAGCCAGGCAGGATGACTTGTGTGGCGCTGACACTTaGGAACCCTCCAGACAGGCACTTGTAAGTGCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: AARQDDLCGADT*EPSRQALVSAA Trigger: GGCCGCACTTACAAGTGCCTGTCTGGAGGGTTCTCAAGTGTCAGCGCCACACAAGTCATCCTGCCTGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR CCA 72 bp | AGGACTGGAAACTCGCACTTTTGTGAGATCAGGGAGTaGGGTGAGGCAGCCGGTCCTTCCCCTCCACCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RTGNSHFCEIRE*GEAAGPSPPPG Trigger: TCCTGGTGGAGGGGAAGGACCGGCTGCCTCACCCCACTCCCTGATCTCACAAAAGTGCGAGTTTCCAGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR GCA 72 bp | AGGATGGCCGGGAAGGTGTACGGCTCCTGGATCTTCTaGCAGGCCTTGCTACTGCAGTTCCCTTCCAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RMAGKVYGSWIF*QALLLQFPSKV Trigger: CACTTTGGAAGGGAACTGCAGTAGCAAGGCCTGGCAGAAGATCCAGGAGCCGTACACCTTCCCGGCCATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219249.2 ENSMUST00000219851.2 |
||
| 3UTR CCA 72 bp | CACTCCGTGCTGCCTCTGTGGACGTCAGGGTGGAACTaGACTTTAAGGAACAGAGTGCCGTCCAGGGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: HSVLPLWTSGWN*TLRNRVPSRAS Trigger: AGATGCCCTGGACGGCACTCTGTTCCTTAAAGTCCAGTTCCACCCTGACGTCCACAGAGGCAGCACGGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR GCA 72 bp | CACCCATCAGTCCCGCGGCCATCAGCTGATACCCCTTaGTTTGTCTTGAGGATTCTGGGCTGCCATCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HPSVPRPSADTP*FVLRILGCHLP Trigger: TGGAAGATGGCAGCCCAGAATCCTCAAGACAAAGCAAGGGGTATCAGCTGATGGCCGCGGGACTGATGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR CCA 72 bp | GCTGGAACCGAGTTTCGCCACTCCGTGCTGCCTCTGTaGACGTCAGGGTGGAACTGGACTTTAAGGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: AGTEFRHSVLPL*TSGWNWTLRNR Trigger: TCTGTTCCTTAAAGTCCAGTTCCACCCTGACGTCCACAGAGGCAGCACGGAGTGGCGAAACTCGGTTCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR CCA 72 bp | AGAGAACAGGGCCGGCCTCCTGCAGTGCATCTCTTGTaGGTAGAGGCCATGCACGCTGCAGTCTGTTATAGA | + |
|
Preference number: 3 (lower is better) Translates to: REQGRPPAVHLL*VEAMHAAVCYR Trigger: TCTATAACAGACTGCAGCGTGCATGGCCTCTACCCACAAGAGATGCACTGCAGGAGGCCGGCCCTGTTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR TCA 72 bp | GAGAGGACAAAGACCTCAGGAGTGGTGGTTGTCATCTaGGGAGAAACAGGGTCAGCCACTTCTGACAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ERTKTSGVVVVI*GETGSATSDRG Trigger: GCCCCTGTCAGAAGTGGCTGACCCTGTTTCTCCTCAGATGACAACCACCACTCCTGAGGTCTTTGTCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR TCA 72 bp | CAGTCTCTTCACCAGTTTCTCCACAAGGTCGTCAACTaGGAGCAGGGTTTGCCACCTGGAGGACACAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QSLHQFLHKVVN*EQGLPPGGHRW Trigger: CCACCTGTGTCCTCCAGGTGGCAAACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| 3UTR TCA 72 bp | GGTTGTCATCTGAGGAGAAACAGGGTCAGCCACTTCTaGCAGGGGCGGATTCACAGTACTGGAAGTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GCHLRRNRVSHF*QGRIHSTGSQL Trigger: CAGCTGACTTCCAGTACTGTGAATCCGCCCCTGTCAGAAGTGGCTGACCCTGTTTCTCCTCAGATGACAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR TCA 72 bp | ACCACGTGGGGACTCATATACTGTGCCCAGCCAAGATaGAGGGACAAGGAGAGGACAAAGACCTCAGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TTWGLIYCAQPR*RDKERTKTSGV Trigger: CACTCCTGAGGTCTTTGTCCTCTCCTTGTCCCTTCATCTTGGCTGGGCACAGTATATGAGTCCCCACGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR TCA 72 bp | TCCGTTGAAGGGCACTTTCTAAGGGAGCGGCTGAGATaGCAGCTCCAGGCAGAGGAACTTCTACAACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SVEGHFLRERLR*QLQAEELLQQL Trigger: CAGCTGTTGTAGAAGTTCCTCTGCCTGGAGCTGTCATCTCAGCCGCTCCCTTAGAAAGTGCCCTTCAACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR GCA 72 bp | CAGGTAGTCCACGCTGTAGTTCTCGCCGTGCTTCCGTaGCTTCCCGTTGATGGAGAGGGTGTAGTTATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QVVHAVVLAVLP*LPVDGEGVVIV Trigger: TACTATAACTACACCCTCTCCATCAACGGGAAGGCACGGAAGCACGGCGAGAACTACAGCGTGGACTACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219249.2 |
||
| 3UTR GCA 72 bp | AGATCCAGACTCGACCACGTGGGGACTCATATACTGTaGCCAGCCAAGATGAAGGGACAAGGAGAGGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSRLDHVGTHIL*PAKMKGQGEDK Trigger: TTTGTCCTCTCCTTGTCCCTTCATCTTGGCTGGGCACAGTATATGAGTCCCCACGTGGTCGAGTCTGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR CCA 72 bp | CTGCAGTTCCCTTCCAAAGTGTTGTTAACGACGTGGTaGTTGTGGGGGTACTTTCCAGTCAGGATGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LQFPSKVLLTTW*LWGYFPVRMLA Trigger: AGCCAGCATCCTGACTGGAAAGTACCCCCACAACCACCACGTCGTTAACAACACTTTGGAAGGGAACTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR TCA 72 bp | CCACTGAGCATCCCAGAACACAGTAAGTCCTCCTCCTaGAGGCGTCATCTAAGAACCGTATTGACGAGTTCG | + |
|
Preference number: 3 (lower is better) Translates to: PLSIPEHSKSSS*RRHLRTVLTSS Trigger: CGAACTCGTCAATACGGTTCTTAGATGACGCCTTCAGGAGGAGGACTTACTGTGTTCTGGGATGCTCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| 3UTR CCA 72 bp | CTACTGCAGTTCCCTTCCAAAGTGTTGTTAACGACGTaGTGGTTGTGGGGGTACTTTCCAGTCAGGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLQFPSKVLLTT*WLWGYFPVRML Trigger: CAGCATCCTGACTGGAAAGTACCCCCACAACCACCACGTCGTTAACAACACTTTGGAAGGGAACTGCAGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR TCA 72 bp | AATTCATTGAGAAGTGCAGCAGTGAACAGGGTCCGTTaGAGGGCACTTTCTAAGGGAGCGGCTGAGATGACA | + |
|
Preference number: 3 (lower is better) Translates to: NSLRSAAVNRVR*RALSKGAAEMT Trigger: TGTCATCTCAGCCGCTCCCTTAGAAAGTGCCCTTCAACGGACCCTGTTCACTGCTGCACTTCTCAATGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR CAA 90 bp | GCTGATACCCCTTGCTTTGTCTTGAGGATTCTGGGCTGCCATCTTCCATTAGAAGGTTCAGAGAGGATCTaGTGTCCCACAATCCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: ADTPCFVLRILGCHLPLEGSERI*CPTILM Trigger: CATTAGGATTGTGGGACACAAGATCCTCTCTGAACC...TTCTAATGGAAGATGGCAGCCCAGAATCCTCAAGACAAAGCAAGGGGTATCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR GCA 72 bp | CTTTCGTTAGAGACAAATCATCTGGTGGAACACTTGTaGAGTATGGGGCCCCGTCTAGTCATTCAGTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSLETNHLVEHL*SMGPRLVIQFH Trigger: ATGGAACTGAATGACTAGACGGGGCCCCATACTGCACAAGTGTTCCACCAGATGATTTGTCTCTAACGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR GCA 72 bp | CATAAAAACCCGGGCGCTGGCAATTCAGAAGGTGTTTaGAACAGTACCAACTTGTTGAACTCAAAGACACTC | + |
|
Preference number: 3 (lower is better) Translates to: HKNPGAGNSEGV*NSTNLLNSKTL Trigger: GAGTGTCTTTGAGTTCAACAAGTTGGTACTGTTGCAAACACCTTCTGAATTGCCAGCGCCCGGGTTTTTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCCAGACCTGTGCTATACAGTGCTTTaGATTTGGGGGCTAGCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSGAGYKTEDSNISIPDLCYTVL*IWGLAK Trigger: TTTAGCTAGCCCCCAAATCAAAAGCACTGTATAGCA...CAGGTCTGGGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR TCA 72 bp | CTTCTACAACAGCTGATGAGAATTTACAAAGTCCATTaGGCGCAAAGTGCTGGTGAGCTAAAGAACCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLQQLMRIYKVH*AQSAGELKNPG Trigger: TCCTGGGTTCTTTAGCTCACCAGCACTTTGCGCTCAATGGACTTTGTAAATTCTCATCAGCTGTTGTAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR-3UTR CAA 90 bp | CATTATCAGAAGAGTTTTACAGATCCAGACTCGACCACGTGGGGACTCATATACTTTTTCAAACAAGACTaGAAAGAGCAAGGCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HYQKSFTDPDSTTWGLIYFFKQD*KEQGQS Trigger: GCTCTGGCCTTGCTCTTTCAAGTCTTGTTTGAAAAA...GTATATGAGTCCCCACGTGGTCGAGTCTGGATCTGTAAAACTCTTCTGATAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR CCA 72 bp | CATGTTGGTTTTAATGGTTCTCCCTTTGAAGAGCACTaGTACACATATACCTGGCCTTCAAAGGAGATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HVGFNGSPFEEH*YTYTWPSKEMS Trigger: TGACATCTCCTTTGAAGGCCAGGTATATGTGTACCAGTGCTCTTCAAAGGGAGAACCATTAAAACCAACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR TCA 72 bp | GCAATTCAGAAGGTGTTTGCAACAGTACCAACTTGTTaGACTCAAAGACACTCTAATGTGTACCCTACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: AIQKVFATVPTC*TQRHSNVYPTL Trigger: CAAAGTAGGGTACACATTAGAGTGTCTTTGAGTTCAACAAGTTGGTACTGTTGCAAACACCTTCTGAATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR TCA 90 bp | AGTAACTCCAGCCCAGGGGGATGTGCTCCAGTCCGCCTGCGTCTGGGGCTCCATTGCAGGGCTGGGGATTaGACCCAGGGCCTTGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: SNSSPGGCAPVRLRLGLHCRAGD*TQGLAY Trigger: GTATGCAAGGCCCTGGGTTCAATCCCCAGCCCTGCA...ATGGAGCCCCAGACGCAGGCGGACTGGAGCACATCCCCCTGGGCTGGAGTTACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGTGCTCCAGTCCGCCTGCGTCTGGGGCTCCATACTCGTTTAAATACTGCAGCAGCAGCACGTTaGGCCTGCGAGCCGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGCAPVRLRLGLHTRLNTAAAAR*ACEPPP Trigger: TGGGGGCGGCTCGCAGGCCCAACGTGCTGCTGCTGC...AGTATTTAAACGAGTATGGAGCCCCAGACGCAGGCGGACTGGAGCACATCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000219249.2 ENSMUST00000219851.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCATACCAGTAACTCCAGCCCAGGGGGATGTGCTCCAGTCCGCCTGCGTCCGTCTGTTGCAGGGCTaGGGATTGAACCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGIPVTPAQGDVLQSACVRLLQG*GLNPGP Trigger: AGGCCCTGGGTTCAATCCCCAGCCCTGCAACAGACG...GACGCAGGCGGACTGGAGCACATCCCCCTGGGCTGGAGTTACTGGTATGCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS-3UTR TCA 90 bp | ACGTCAGGGTGGAACTGGACTTTAAGGAACAGAGTGCCGTCCAGGGCATCTGGGAGCAGCCGTCCACGGTaGGTGGGGCGCTGGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGWNWTLRNRVPSRASGSSRPR*VGRWSG Trigger: TCCACTCCAGCGCCCCACTCACCGTGGACGGCTGCT...CCCAGATGCCCTGGACGGCACTCTGTTCCTTAAAGTCCAGTTCCACCCTGACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | GGGATGTGCTCCAGTCCGCCTGCGTCTGGGGCTCCATACTCGTTTAAATACTTCGCAGCAGCAGCACGTTaGGCCTGCGAGCCGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GMCSSPPASGAPYSFKYFAAAAR*ACEPPP Trigger: TGGGGGCGGCTCGCAGGCCCAACGTGCTGCTGCTGC...GAAGTATTTAAACGAGTATGGAGCCCCAGACGCAGGCGGACTGGAGCACATCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000219249.2 ENSMUST00000219851.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCCAGGGGGATGTGCTCCAGTCCGCCTGCGTCTGGGGCTCCATACTCGTACGACGTGGTGGTTGTaGGGGTACTTTCCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPGGCAPVRLRLGLHTRTTWWL*GYFPVR Trigger: CCTGACTGGAAAGTACCCCCACAACCACCACGTCGT...ACGAGTATGGAGCCCCAGACGCAGGCGGACTGGAGCACATCCCCCTGGGCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219249.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCATACCAGTAACTCCAGCCCAGGGGGATGTGCTCCAGTCCGCCTGCGTCCTTGGTTTTCTTCAGTaGCGTCATGCCGCCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGIPVTPAQGDVLQSACVLGFLQ*RHAAEL Trigger: GAGCTCGGCGGCATGACGCCACTGAAGAAAACCAAG...GACGCAGGCGGACTGGAGCACATCCCCCTGGGCTGGAGTTACTGGTATGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219249.2 |
||
| CDS-3UTR GCA 90 bp | AGTAACTCCAGCCCAGGGGGATGTGCTCCAGTCCGCCTGCGTCTGGGGCTCCATCCACTGAGCCACATGTaGAGGCCTGTCAGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNSSPGGCAPVRLRLGLHPLSHM*RPVSVF Trigger: AAACACACTGACAGGCCTGCACATGTGGCTCAGTGG...ATGGAGCCCCAGACGCAGGCGGACTGGAGCACATCCCCCTGGGCTGGAGTTACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGCATACCAGTAACTCCAGCCCAGGGGGATGTGCTCCAGTCCGCCTGCGTCTTGCATACTCAGGCATaGACTCTCCCACTGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGIPVTPAQGDVLQSACVLHTQA*TLPLSH Trigger: GTGGCTCAGTGGGAGAGTGCATGCCTGAGTATGCAA...GACGCAGGCGGACTGGAGCACATCCCCCTGGGCTGGAGTTACTGGTATGCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTGAGATCAGGGAGTGGGGTGAGGCAGCCGGTCCTTCCCCTCCACCAGGAGTCCGTGCCTTCCCGTTaGTGGAGAGGGTGTAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FVRSGSGVRQPVLPLHQESVPSR*WRGCSY Trigger: ATAACTACACCCTCTCCATCAACGGGAAGGCACGGA...CTCCTGGTGGAGGGGAAGGACCGGCTGCCTCACCCCACTCCCTGATCTCACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR GCA 90 bp | TTTGTGAGATCAGGGAGTGGGGTGAGGCAGCCGGTCCTTCCCCTCCACCAGGAGTCTTCTGCCAGGCCTTaGTACTGCAGTTCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FVRSGSGVRQPVLPLHQESSARP*YCSSLP Trigger: TGGAAGGGAACTGCAGTAGCAAGGCCTGGCAGAAGA...CTCCTGGTGGAGGGGAAGGACCGGCTGCCTCACCCCACTCCCTGATCTCACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | TTTGTGAGATCAGGGAGTGGGGTGAGGCAGCCGGTCCTTCCCCTCCACCAGGAGAGCATCTTGCTGGTCTaGTTTGGTTTGATGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVRSGSGVRQPVLPLHQESILLV*FGLMPG Trigger: GCCCGGCATCAAACCAAACCAGACCAGCAAGATGCT...CTCCTGGTGGAGGGGAAGGACCGGCTGCCTCACCCCACTCCCTGATCTCACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | AGGAACAGAGTGCCGTCCAGGGCATCTGGGAAGCCGGCCAGGGGAATACTGACTCGAGGTCCAGGATGGTaGGACCCAAGTCGATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNRVPSRASGKPARGILTRGPGW*DPSRCL Trigger: CAAACATCGACTTGGGTCCCACCATCCTGGACCTCG...AGTCAGTATTCCCCTGGCCGGCTTCCCAGATGCCCTGGACGGCACTCTGTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR GCA 90 bp | GGGATGTGCTCCAGTCCGCCTGCGTCTGGGGCTCCATACTCGTTTAAATACTTCTTTTGTGCATCCCCATaGCGCCGAGCTCCGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GMCSSPPASGAPYSFKYFFCASP*RRAPRP Trigger: AGGACGCGGAGCTCGGCGGCATGGGGATGCACAAAA...GAAGTATTTAAACGAGTATGGAGCCCCAGACGCAGGCGGACTGGAGCACATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS-3UTR GCA 90 bp | CACGTGGGGACTCATATACTGTGCCCAGCCAAGATGAAGGGACAAGGAGAGGACAAAGCCTTCTGGTACTaGGGAGCAGCCGTCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: HVGTHILCPAKMKGQGEDKAFWY*GAAVHG Trigger: ACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTT...GTCCTCTCCTTGTCCCTTCATCTTGGCTGGGCACAGTATATGAGTCCCCACGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | CTCCGGTCGAGTCCAGTCTCTTCACCAGTTTCTCCACAAGGTCGTCAACTGAGAGCCGTCCACGGTGAGTaGGGCGCAGAACATCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSSPVSSPVSPQGRQLRAVHGE*GAEHLS Trigger: TGACAGATGTTCTGCGCCCCACTCACCGTGGACGGC...TCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAGACTGGACTCGACCGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| 3UTR CAA 72 bp | TACAGAGAACAGGGCCGGCCTCCTGCAGTGCATCTCTaGTGGGTAGAGGCCATGCACGCTGCAGTCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YREQGRPPAVHL*WVEAMHAAVCY Trigger: ATAACAGACTGCAGCGTGCATGGCCTCTACCCACAAGAGATGCACTGCAGGAGGCCGGCCCTGTTCTCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGTGCTCCAGTCCGCCTGCGTCTGGGGCTCCATACTCGTTTAAATACTTTGAACCCAGGGCCTTaGATACTCAGGCATGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GGCAPVRLRLGLHTRLNTLNPGP*ILRHAL Trigger: GAGTGCATGCCTGAGTATGCAAGGCCCTGGGTTCAA...AGTATTTAAACGAGTATGGAGCCCCAGACGCAGGCGGACTGGAGCACATCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS-3UTR CCA 90 bp | AAACGCTCATCCCAGGAAAGCAAACAGCTAATGCTCAACCCGGTCCCCCAGGCTTTCCAGTCAGGATGCTaGCTCTGCTGGGGCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRSSQESKQLMLNPVPQAFQSGC*LCWGSK Trigger: TTTGCTGCCCCAGCAGAGCCAGCATCCTGACTGGAA...AGCCTGGGGGACCGGGTTGAGCATTAGCTGTTTGCTTTCCTGGGATGAGCGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGTTTCTCCACAAGGTCGTCAACTGAGAGCAGGGTTTGCCACCTGGAGGACACGACGTGGTGGTTGTaGGGGTACTTTCCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSFSTRSSTESRVCHLEDTTWWL*GYFPVR Trigger: CCTGACTGGAAAGTACCCCCACAACCACCACGTCGT...GTCCTCCAGGTGGCAAACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR CCA 90 bp | AAACGCTCATCCCAGGAAAGCAAACAGCTAATGCTCAACCCGGTCCCCCAGGCTAAGGTGTACGGCTCCTaGATCTTCTGCCAGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRSSQESKQLMLNPVPQAKVYGS*IFCQAL Trigger: CAAGGCCTGGCAGAAGATCCAGGAGCCGTACACCTT...AGCCTGGGGGACCGGGTTGAGCATTAGCTGTTTGCTTTCCTGGGATGAGCGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTGAGATCAGGGAGTGGGGTGAGGCAGCCGGTCCTTCCCCTCCACCAGGAGAGAATGGCTCAGAGTTaGACTTGTAGTCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FVRSGSGVRQPVLPLHQERMAQS*TCSPGS Trigger: ACTTCCTGGACTACAAGTCCAACTCTGAGCCATTCT...CTCCTGGTGGAGGGGAAGGACCGGCTGCCTCACCCCACTCCCTGATCTCACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR TCA 90 bp | CACGTGGGGACTCATATACTGTGCCCAGCCAAGATGAAGGGACAAGGAGAGGACTTCCGGCCTTCTCCTTaGTATTCCACCAGCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HVGTHILCPAKMKGQGEDFRPSP*YSTSTS Trigger: AGACGTGCTGGTGGAATATCAAGGAGAAGGCCGGAA...GTCCTCTCCTTGTCCCTTCATCTTGGCTGGGCACAGTATATGAGTCCCCACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR GCA 90 bp | GAGTCCAGTCTCTTCACCAGTTTCTCCACAAGGTCGTCAACTGAGAGCAGGGTTACTTTCCAGTCAGGATaGTGGCTCTGCTGGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESSLFTSFSTRSSTESRVTFQSG*WLCWGS Trigger: GCTGCCCCAGCAGAGCCAGCATCCTGACTGGAAAGT...AACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAGACTGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR CCA 90 bp | ATGACAGCTCCAGGCAGAGGAACTTCTACAACAGCTGATGAGAATTTACAAAGTGCAGCAGCAGCACGTTaGGCCTGCGAGCCGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MTAPGRGTSTTADENLQSAAAAR*ACEPPP Trigger: TGGGGGCGGCTCGCAGGCCCAACGTGCTGCTGCTGC...ACTTTGTAAATTCTCATCAGCTGTTGTAGAAGTTCCTCTGCCTGGAGCTGTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR TCA 90 bp | TCGAGTCCAGTCTCTTCACCAGTTTCTCCACAAGGTCGTCAACTGAGAGCAGGGTCCGTGCCTTCCCGTTaGTGGAGAGGGTGTAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPVSSPVSPQGRQLRAGSVPSR*WRGCSY Trigger: ATAACTACACCCTCTCCATCAACGGGAAGGCACGGA...CCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAGACTGGACTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR TCA 90 bp | ACGTCAGGGTGGAACTGGACTTTAAGGAACAGAGTGCCGTCCAGGGCATCTGGGTCGTCCCGTGGATGTTaGAGTTCTTGTTTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSGWNWTLRNRVPSRASGSSRGC*SSCFLV Trigger: CACCAAGAAACAAGAACTTCAACATCCACGGGACGA...CCCAGATGCCCTGGACGGCACTCTGTTCCTTAAAGTCCAGTTCCACCCTGACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR GCA 90 bp | ATGTCCTTTCTCTACGTGTCCACAGACAGCAGCTCTTCTCGCAACTGTGTGAGTACTTTCCAGTCAGGATaGTGGCTCTGCTGGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSFLYVSTDSSSSRNCVSTFQSG*WLCWGS Trigger: GCTGCCCCAGCAGAGCCAGCATCCTGACTGGAAAGT...ACTCACACAGTTGCGAGAAGAGCTGCTGTCTGTGGACACGTAGAGAAAGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTCTTCACCAGTTTCTCCACAAGGTCGTCAACTGAGAGCAGGGTTTGCCTCTTCTGCCAGGCCTTaGTACTGCAGTTCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSSPVSPQGRQLRAGFASSARP*YCSSLP Trigger: TGGAAGGGAACTGCAGTAGCAAGGCCTGGCAGAAGA...GGCAAACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR GCA 90 bp | CCGTCCAGGGCATCTGGGAAGCCGGCCAGGGGAATACTGACTGGAGCCCTAGTTTCAAACTCATACAGCTaGCGTTTGTCTATTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSRASGKPARGILTGALVSNSYS*RLSIGK Trigger: TTTGCCAATAGACAAACGGCAGCTGTATGAGTTTGA...AACTAGGGCTCCAGTCAGTATTCCCCTGGCCGGCTTCCCAGATGCCCTGGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | CTTCAAAGGAGATGTCAAAATGCTGAGTACAGAGAACAGGGCCGGCCTCCTGCACTTGGTTTTCTTCAGTaGCGTCATGCCGCCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQRRCQNAEYREQGRPPALGFLQ*RHAAEL Trigger: GAGCTCGGCGGCATGACGCCACTGAAGAAAACCAAG...TGCAGGAGGCCGGCCCTGTTCTCTGTACTCAGCATTTTGACATCTCCTTTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | AACTGTGGTCAGCTTTCACTATTTCACTGGTCATGTTTAGAATCCAAGTGGGGGGCCGTCCACGGTGAGTaGGGCGCTGGAGTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NCGQLSLFHWSCLESKWGAVHGE*GAGVEI Trigger: GATCTCCACTCCAGCGCCCCACTCACCGTGGACGGC...CCCCCACTTGGATTCTAAACATGACCAGTGAAATAGTGAAAGCTGACCACAGTT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCCAGACCTGAGGGTCAAAGACCCCTaGAGTGCGACAGGTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGAGYKTEDSNISIPDLRVKDP*SATGRP Trigger: GGGCCGACCTGTCGCACTCCAGGGGTCTTTGACCCT...CAGGTCTGGGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | AATTCTTTTCCAGGGCATACCAGTAACTCCAGCCCAGGGGGATGTGCTCCAGTCTTCCAGTCAGGATGCTaGCTGGCGCTAGAGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NSFPGHTSNSSPGGCAPVFQSGC*LALEKV Trigger: GACTTTCTCTAGCGCCAGCCAGCATCCTGACTGGAA...GACTGGAGCACATCCCCCTGGGCTGGAGTTACTGGTATGCCCTGGAAAAGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219249.2 |
||
| 3UTR CAA 72 bp | GTCCCGCGGCCATCAGCTGATACCCCTTGCTTTGTCTaGAGGATTCTGGGCTGCCATCTTCCATTAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPRPSADTPCFV*RILGCHLPLEN Trigger: GTTTTCTAATGGAAGATGGCAGCCCAGAATCCTCAAGACAAAGCAAGGGGTATCAGCTGATGGCCGCGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR CAA 72 bp | CAGTTCCCTTCCAAAGTGTTGTTAACGACGTGGTGGTaGTGGGGGTACTTTCCAGTCAGGATGCTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QFPSKVLLTTWW*WGYFPVRMLAL Trigger: CAGAGCCAGCATCCTGACTGGAAAGTACCCCCACAACCACCACGTCGTTAACAACACTTTGGAAGGGAACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| 3UTR CAA 72 bp | TGCCAGGCCTTGCTACTGCAGTTCCCTTCCAAAGTGTaGTTAACGACGTGGTGGTTGTGGGGGTACTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQALLLQFPSKV*LTTWWLWGYFP Trigger: TGGAAAGTACCCCCACAACCACCACGTCGTTAACAACACTTTGGAAGGGAACTGCAGTAGCAAGGCCTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS-3UTR TCA 90 bp | GGAGATGTCAAAATGCTGAGTACAGAGAACAGGGCCGGCCTCCTGCAGTGCATCGAGTGGAGATCATCATaGAGAATGGCTCAGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDVKMLSTENRAGLLQCIEWRSS*RMAQSW Trigger: CCAACTCTGAGCCATTCTTCATGATGATCTCCACTC...GATGCACTGCAGGAGGCCGGCCCTGTTCTCTGTACTCAGCATTTTGACATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR TCA 90 bp | ATGTCCTTTCTCTACGTGTCCACAGACAGCAGCTCTTCTCGCAACTGTGTGAGTCACAAGGTCGTCAACTaGGAGCAGGGTTTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: MSFLYVSTDSSSSRNCVSHKVVN*EQGLPP Trigger: AGGTGGCAAACCCTGCTCTCAGTTGACGACCTTGTG...ACTCACACAGTTGCGAGAAGAGCTGCTGTCTGTGGACACGTAGAGAAAGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAAGCAAACAGCTAATGCTCAACCCGGTCCCCCAGGCTCCACCACTGAGGTTCTTGTTTCTTGGTaGGATGACATTCTGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGKQTANAQPGPPGSTTEVLVSW*DDILES Trigger: GCTTTCCAGAATGTCATCGCACCAAGAAACAAGAAC...CTCAGTGGTGGAGCCTGGGGGACCGGGTTGAGCATTAGCTGTTTGCTTTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR GCA 90 bp | GTCGCCTGCTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCACTGAGAGCAGGGTTTaGCACCTCCTCCTGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VACFQEPAIKLKTLTSQSTESRV*HLLLKA Trigger: CGCCTTCAGGAGGAGGTGGCAAACCCTGCTCTCAGT...GGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAGCAGGCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | GAAGATATACGTGTTGTCCAGCTCTCCGGTCGAGTCCAGTCTCTTCACCAGTTTTTCTGGAAAGCCTTCTaGTACTGCGGAGCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: EDIRVVQLSGRVQSLHQFFWKAF*YCGAAV Trigger: GACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAA...AAACTGGTGAAGAGACTGGACTCGACCGGAGAGCTGGACAACACGTATATCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGGCAACGGCCACACAGAAACGCTCATCCCAGGAAAGCAAACAGCTAATGGTGCGATGACATTCTaGAAAGCCTTCTGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRGNGHTETLIPGKQTANGAMTF*KAFWYC Trigger: GCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACC...ATTAGCTGTTTGCTTTCCTGGGATGAGCGTTTCTGTGTGGCCGTTGCCCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR TCA 90 bp | AATGTCCTTTCTCTACGTGTCCACAGACAGCAGCTCTTCTCGCAACTGTGTGAGTTTGCCACCTCCTCCTaGAGGCGTCATCTAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: NVLSLRVHRQQLFSQLCEFATSS*RRHLRT Trigger: GGTTCTTAGATGACGCCTTCAGGAGGAGGTGGCAAA...CTCACACAGTTGCGAGAAGAGCTGCTGTCTGTGGACACGTAGAGAAAGGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR GCA 90 bp | GGAGATGTCAAAATGCTGAGTACAGAGAACAGGGCCGGCCTCCTGCAGTGCATCGATCTGGTCTGGATCTaGAGTGATATTGTAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDVKMLSTENRAGLLQCIDLVWI*SDIVDF Trigger: GAAGTCTACAATATCACTGCAGATCCAGACCAGATC...GATGCACTGCAGGAGGCCGGCCCTGTTCTCTGTACTCAGCATTTTGACATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | ACGTCAGGGTGGAACTGGACTTTAAGGAACAGAGTGCCGTCCAGGGCATCTGGGGATCATCATGAAGAATaGCTCAGAGTTGGACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSGWNWTLRNRVPSRASGDHHEE*LRVGLV Trigger: TACAAGTCCAACTCTGAGCCATTCTTCATGATGATC...CCCAGATGCCCTGGACGGCACTCTGTTCCTTAAAGTCCAGTTCCACCCTGACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | AATGTCCTTTCTCTACGTGTCCACAGACAGCAGCTCTTCTCGCAACTGTGTGAGGGTGCGATGACATTCTaGAAAGCCTTCTGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NVLSLRVHRQQLFSQLCEGAMTF*KAFWYC Trigger: GCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACC...CTCACACAGTTGCGAGAAGAGCTGCTGTCTGTGGACACGTAGAGAAAGGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR TCA 90 bp | AAGATATACGTGTTGTCCAGCTCTCCGGTCGAGTCCAGTCTCTTCACCAGTTTCTCGTCCCGTGGATGTTaGAGTTCTTGTTTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KIYVLSSSPVESSLFTSFSSRGC*SSCFLV Trigger: CACCAAGAAACAAGAACTTCAACATCCACGGGACGA...GAAACTGGTGAAGAGACTGGACTCGACCGGAGAGCTGGACAACACGTATATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR TCA 90 bp | AACTGTGGTCAGCTTTCACTATTTCACTGGTCATGTTTAGAATCCAAGTGGGGGGTTCTGACGCTGCCGTaGCTGTTGAACATGAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: NCGQLSLFHWSCLESKWGVLTLP*LLNMRR Trigger: GCGTCTCATGTTCAACAGTCACGGCAGCGTCAGAAC...CCCCCACTTGGATTCTAAACATGACCAGTGAAATAGTGAAAGCTGACCACAGTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | AACTGTGGTCAGCTTTCACTATTTCACTGGTCATGTTTAGAATCCAAGTGGGGGACGACGTGGTGGTTGTaGGGGTACTTTCCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NCGQLSLFHWSCLESKWGTTWWL*GYFPVR Trigger: CCTGACTGGAAAGTACCCCCACAACCACCACGTCGT...CCCCCACTTGGATTCTAAACATGACCAGTGAAATAGTGAAAGCTGACCACAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | CATTATCAGAAGAGTTTTACAGATCCAGACTCGACCACGTGGGGACTCATATACTTCTGGAAAGCCTTCTaGTACTGCGGAGCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HYQKSFTDPDSTTWGLIYFWKAF*YCGAAV Trigger: GACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAA...GTATATGAGTCCCCACGTGGTCGAGTCTGGATCTGTAAAACTCTTCTGATAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | ACACAGAAACGCTCATCCCAGGAAAGCAAACAGCTAATGCTCAACCCGGTCCCCTGCTTGTTCGTCCCGTaGATGTTGAAGTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQKRSSQESKQLMLNPVPCLFVP*MLKFLF Trigger: AAACAAGAACTTCAACATCCACGGGACGAACAAGCA...GGGGACCGGGTTGAGCATTAGCTGTTTGCTTTCCTGGGATGAGCGTTTCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTTAGAATCCAAGTGGGGGTGAATGAAGCCGGTATCCACATTCAATTCTGTCAGCGAGGTCCAGGATaGTGGGACCCAAGTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: MFRIQVGVNEAGIHIQFCQRGPG*WDPSRC Trigger: ACATCGACTTGGGTCCCACCATCCTGGACCTCGCTG...ACAGAATTGAATGTGGATACCGGCTTCATTCACCCCCACTTGGATTCTAAACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR TCA 90 bp | AATGTCCTTTCTCTACGTGTCCACAGACAGCAGCTCTTCTCGCAACTGTGTGAGTGTTTCTTGGTGCGATaGCATTCTGGAAAGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVLSLRVHRQQLFSQLCECFLVR*HSGKPS Trigger: AGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACA...CTCACACAGTTGCGAGAAGAGCTGCTGTCTGTGGACACGTAGAGAAAGGACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR TCA 90 bp | CCTGGCCTTCAAAGGAGATGTCAAAATGCTGAGTACAGAGAACAGGGCCGGCCTCCAACAGTGGAACTTTaGTATCAAACTCATACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLQRRCQNAEYREQGRPPTVEL*YQTHTA Trigger: AGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGG...AGGCCGGCCCTGTTCTCTGTACTCAGCATTTTGACATCTCCTTTGAAGGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCCAGACCTGATGGGAGTCTTGGCTTaGCTGATTAGCCAGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGAGYKTEDSNISIPDLMGVLA*LISQCL Trigger: CAAGCACTGGCTAATCAGGCAAGCCAAGACTCCCAT...CAGGTCTGGGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | ATGTTTAGAATCCAAGTGGGGGTGAATGAAGCCGGTATCCACATTCAATTCTGTTTCCAGTCAGGATGCTaGCTCTGCTGGGGCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MFRIQVGVNEAGIHIQFCFQSGC*LCWGSK Trigger: TTTGCTGCCCCAGCAGAGCCAGCATCCTGACTGGAA...ACAGAATTGAATGTGGATACCGGCTTCATTCACCCCCACTTGGATTCTAAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | ATGACAGCTCCAGGCAGAGGAACTTCTACAACAGCTGATGAGAATTTACAAAGTAAGGTGTACGGCTCCTaGATCTTCTGCCAGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MTAPGRGTSTTADENLQSKVYGS*IFCQAL Trigger: CAAGGCCTGGCAGAAGATCCAGGAGCCGTACACCTT...ACTTTGTAAATTCTCATCAGCTGTTGTAGAAGTTCCTCTGCCTGGAGCTGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR GCA 90 bp | AATGTCCTTTCTCTACGTGTCCACAGACAGCAGCTCTTCTCGCAACTGTGTGAGGTTCTTGTTTCTTGGTaGGATGACATTCTGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVLSLRVHRQQLFSQLCEVLVSW*DDILES Trigger: GCTTTCCAGAATGTCATCGCACCAAGAAACAAGAAC...CTCACACAGTTGCGAGAAGAGCTGCTGTCTGTGGACACGTAGAGAAAGGACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR TCA 90 bp | ATGACAGCTCCAGGCAGAGGAACTTCTACAACAGCTGATGAGAATTTACAAAGTTCTTGGCAATGTTGGTaGTCTGGTCTGGATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MTAPGRGTSTTADENLQSSWQCW*SGLDLQ Trigger: CTGCAGATCCAGACCAGATCACCAACATTGCCAAGA...ACTTTGTAAATTCTCATCAGCTGTTGTAGAAGTTCCTCTGCCTGGAGCTGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR CAA 72 bp | ACGCTGCAGTCTGTTATAGAAGGTCTACTTGAATGTTaGCAGGAACGTTCCTTAACCAGGAGGTTCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLQSVIEGLLEC*QERSLTRRFRE Trigger: CTCTCTGAACCTCCTGGTTAAGGAACGTTCCTGCAAACATTCAAGTAGACCTTCTATAACAGACTGCAGCGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCCAGACCTGCCCTCGAACCAACAGTaGAACTTTGATATCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSGAGYKTEDSNISIPDLPSNQQ*NFDIKL Trigger: GAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGG...CAGGTCTGGGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCCAGACCTGGTTGGTGATCTGGTCTaGATCTGCAGTGATATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSGAGYKTEDSNISIPDLVGDLV*ICSDIV Trigger: TACAATATCACTGCAGATCCAGACCAGATCACCAAC...CAGGTCTGGGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR TCA 90 bp | ATGACAGCTCCAGGCAGAGGAACTTCTACAACAGCTGATGAGAATTTACAAAGTGTGGTAGCCGTTGTCTaGGGTATAGAAGATATACGT | + |
|
Preference number: 4 (lower is better) Translates to: MTAPGRGTSTTADENLQSVVAVV*GIEDIR Trigger: ACGTATATCTTCTATACCTCAGACAACGGCTACCAC...ACTTTGTAAATTCTCATCAGCTGTTGTAGAAGTTCCTCTGCCTGGAGCTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CCA 90 bp | ATGACAGCTCCAGGCAGAGGAACTTCTACAACAGCTGATGAGAATTTACAAAGTTGCTTGTTCGTCCCGTaGATGTTGAAGTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MTAPGRGTSTTADENLQSCLFVP*MLKFLF Trigger: AAACAAGAACTTCAACATCCACGGGACGAACAAGCA...ACTTTGTAAATTCTCATCAGCTGTTGTAGAAGTTCCTCTGCCTGGAGCTGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| 3UTR CAA 72 bp | TCCATTAGAAAACATAAGATAAAGATACCCCTACGTTaGAGAATACTTCCCACAGATGAAGGTGTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIRKHKIKIPLR*RILPTDEGVTS Trigger: GGAAGTTACACCTTCATCTGTGGGAAGTATTCTCAAACGTAGGGGTATCTTTATCTTATGTTTTCTAATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | CCAGTAACTCCAGCCCAGGGGGATGTGCTCCAGTCCGCCTGCGTCTGGGGCTCCAGCAGCAGCAGCACGTaGGGCCTGCGAGCCGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PVTPAQGDVLQSACVWGSSSSST*GLRAAP Trigger: GGGGGCGGCTCGCAGGCCCAACGTGCTGCTGCTGCT...GGAGCCCCAGACGCAGGCGGACTGGAGCACATCCCCCTGGGCTGGAGTTACTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000219249.2 ENSMUST00000219851.2 |
||
| CDS GCA 90 bp | TGTGCAGGCCTGTCAGTGTGTTTCATCTGCACTCGCCATCTTTTGTaGATCCCCATGCCGCCGAGCTCCGCGTCCTGGTCGTCGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CAGLSVCFICTRHLL*IPMPPSSASWSSVS Trigger: GCTCACCGACGACCAGGACGCGGAGCTCGGCGGCATGGGGATGCACAAAAGATGGCGAGTGCAGATGAAACACACTGACAGGCCTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS TCA 90 bp | GAGCAGCCGTCCACGGTGAGTGGGGCGCTGGAGTGGAGATCATCATaGAGAATGGCTCAGAGTTGGACTTGTAGTCCAGGAAGTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EQPSTVSGALEWRSS*RMAQSWTCSPGSPG Trigger: CCCTGGACTTCCTGGACTACAAGTCCAACTCTGAGCCATTCTTCATGATGATCTCCACTCCAGCGCCCCACTCACCGTGGACGGCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCCAGACCTGAGCAGCAGCAGCACGTaGGGCCTGCGAGCCGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSGAGYKTEDSNISIPDLSSSST*GLRAAP Trigger: GGGGGCGGCTCGCAGGCCCAACGTGCTGCTGCTGCT...CAGGTCTGGGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | CAGGTAGTCCACGCTGTAGTTCTCGCCGTGCTTCCGTGCCTTCCCGTTGATGGATCTCCGATGAGGGCCTaGGTTTTCTTCAGTGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QVVHAVVLAVLPCLPVDGSPMRA*VFFSGV Trigger: GACGCCACTGAAGAAAACCAAGGCCCTCATCGGAGA...TCCATCAACGGGAAGGCACGGAAGCACGGCGAGAACTACAGCGTGGACTACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219249.2 |
||
| CDS TCA 90 bp | GACATTCTGGAAAGCCTTCTGGTACTGCGGAGCAGCCGTCCACGGTaGGTGGGGCGCTGGAGTGGAGATCATCATGAAGAATGGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DILESLLVLRSSRPR*VGRWSGDHHEEWLR Trigger: TCTGAGCCATTCTTCATGATGATCTCCACTCCAGCGCCCCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 90 bp | TTCTTGTTTCTTGGTGCGATGACATTCTGGAAAGCCTTCTGGTACTaGGGAGCAGCCGTCCACGGTGAGTGGGGCGCTGGAGTGGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: FLFLGAMTFWKAFWY*GAAVHGEWGAGVEI Trigger: GATCTCCACTCCAGCGCCCCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 90 bp | TTCTGGAAAGCCTTCTGGTACTGCGGAGCAGCCGTCCACGGTGAGTaGGGCGCTGGAGTGGAGATCATCATGAAGAATGGCTCAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FWKAFWYCGAAVHGE*GAGVEIIMKNGSEL Trigger: CAACTCTGAGCCATTCTTCATGATGATCTCCACTCCAGCGCCCCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 90 bp | TTGAAGTTCTTGTTTCTTGGTGCGATGACATTCTGGAAAGCCTTCTaGTACTGCGGAGCAGCCGTCCACGGTGAGTGGGGCGCTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LKFLFLGAMTFWKAF*YCGAAVHGEWGAGV Trigger: CACTCCAGCGCCCCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAAGAACTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | CACGTGGGGACTCATATACTGTGCCCAGCCAAGATGAAGGGACAAGGAGAGGACTCTCCGATGAGGGCCTaGGTTTTCTTCAGTGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: HVGTHILCPAKMKGQGEDSPMRA*VFFSGV Trigger: GACGCCACTGAAGAAAACCAAGGCCCTCATCGGAGA...GTCCTCTCCTTGTCCCTTCATCTTGGCTGGGCACAGTATATGAGTCCCCACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS TCA 90 bp | AACATTGAGACACTCCAGGACTCAAAGAAGGGCAGGTCGGGTCGGTaGCATTCCGGCCTTCTCCTTGATATTCCACCAGCACGTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: NIETLQDSKKGRSGR*HSGLLLDIPPARLT Trigger: GGTCAGACGTGCTGGTGGAATATCAAGGAGAAGGCCGGAATGTCACCGACCCGACCTGCCCTTCTTTGAGTCCTGGAGTGTCTCAATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 90 bp | AGGGCCTTGCATACTCAGGCATGCACTCTCCCACTGAGCCACATGTaGAGGCCTGTCAGTGTGTTTCATCTGCACTCGCCATCTTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RALHTQACTLPLSHM*RPVSVFHLHSPSFV Trigger: CACAAAAGATGGCGAGTGCAGATGAAACACACTGACAGGCCTGCACATGTGGCTCAGTGGGAGAGTGCATGCCTGAGTATGCAAGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS CCA 90 bp | GTCCCGTGGATGTTGAAGTTCTTGTTTCTTGGTGCGATGACATTCTaGAAAGCCTTCTGGTACTGCGGAGCAGCCGTCCACGGTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPWMLKFLFLGAMTF*KAFWYCGAAVHGEW Trigger: CCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAAGAACTTCAACATCCACGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040344.7 ENSMUST00000219505.2 |
||
| CDS CCA 90 bp | CCATCTGTGTCTTGTTCAGGTCATAGCCAGCGAGGTCCAGGATGGTaGGACCCAAGTCGATGTTTGAGACCAGCATCTTGCTGGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSVSCSGHSQRGPGW*DPSRCLRPASCWSG Trigger: ACCAGACCAGCAAGATGCTGGTCTCAAACATCGACTTGGGTCCCACCATCCTGGACCTCGCTGGCTATGACCTGAACAAGACACAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | CTCTACTGCCTGCTGGCCTCTCAGTATCACCAAAGTTGCTGGGGTCACATGAGGTTAACGACGTGGTGGTaGTGGGGGTACTTTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LYCLLASQYHQSCWGHMRLTTWW*WGYFPV Trigger: GACTGGAAAGTACCCCCACAACCACCACGTCGTTAA...CCTCATGTGACCCCAGCAACTTTGGTGATACTGAGAGGCCAGCAGGCAGTAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | CACGTGGGGACTCATATACTGTGCCCAGCCAAGATGAAGGGACAAGGAGAGGACATTCCGGCCTTCTCCTaGATATTCCACCAGCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: HVGTHILCPAKMKGQGEDIPAFS*IFHQHV Trigger: GACGTGCTGGTGGAATATCAAGGAGAAGGCCGGAAT...GTCCTCTCCTTGTCCCTTCATCTTGGCTGGGCACAGTATATGAGTCCCCACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | ACCACCTGGGACGAGGTGACTCACCAGCCTTTCGTTAGAGACAAATCATCTGGTTTGCAGGGCTGGGGATaGAACCCAGGGCCTTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: TTWDEVTHQPFVRDKSSGLQGWG*NPGPCI Trigger: TATGCAAGGCCCTGGGTTCAATCCCCAGCCCTGCAA...ACCAGATGATTTGTCTCTAACGAAAGGCTGGTGAGTCACCTCGTCCCAGGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS TCA 90 bp | CTCAAAGAAGGGCAGGTCGGGTCGGTGACATTCCGGCCTTCTCCTTaGTATTCCACCAGCACGTCTGACCTCCAGGTTAAGTTTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKEGQVGSVTFRPSP*YSTSTSDLQVKFLS Trigger: AGACAGAAACTTAACCTGGAGGTCAGACGTGCTGGTGGAATATCAAGGAGAAGGCCGGAATGTCACCGACCCGACCTGCCCTTCTTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 90 bp | CATCCATCTGTGTCTTGTTCAGGTCATAGCCAGCGAGGTCCAGGATaGTGGGACCCAAGTCGATGTTTGAGACCAGCATCTTGCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HPSVSCSGHSQRGPG*WDPSRCLRPASCWS Trigger: AGACCAGCAAGATGCTGGTCTCAAACATCGACTTGGGTCCCACCATCCTGGACCTCGCTGGCTATGACCTGAACAAGACACAGATGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 90 bp | TTGAAGTTCTTGTTTCTTGGTGCGATGACATTCTGGAAAGCCTTCTaGTACTGCGGAGCAGCCGTCCACGGTGAGTGGGGCGCAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: LKFLFLGAMTFWKAF*YCGAAVHGEWGAEH Trigger: ATGTTCTGCGCCCCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAAGAACTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTGAGATCAGGGAGTGGGGTGAGGCAGCCGGTCCTTCCCCTCCACCAGGAGACCAACAGTGGAACTTaGATATCAAACTCATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FVRSGSGVRQPVLPLHQETNSGT*ISNSYS Trigger: GCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGT...CTCCTGGTGGAGGGGAAGGACCGGCTGCCTCACCCCACTCCCTGATCTCACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 90 bp | CCAGTGCTTGTTCGTCCCGTGGATGTTGAAGTTCTTGTTTCTTGGTaGGATGACATTCTGGAAAGCCTTCTGGTACTGCGGAGCAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PVLVRPVDVEVLVSW*DDILESLLVLRSSR Trigger: ACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAAGAACTTCAACATCCACGGGACGAACAAGCACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040344.7 ENSMUST00000219505.2 |
||
| CDS GCA 90 bp | CTCTTCACCAGTTTCTCCACAAGGTCGTCAACTGAGAGCAGGGTTTaGCACCTCCTCCTGAAGGCGTCATCTAAGAACCGTATTGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFTSFSTRSSTESRV*HLLLKASSKNRIDE Trigger: CTCGTCAATACGGTTCTTAGATGACGCCTTCAGGAGGAGGTGGCAAACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | ATGTCCTTTCTCTACGTGTCCACAGACAGCAGCTCTTCTCGCAACTGTGTGAGTAAGTCCAGGGAGAGGTaGGCCAGAACATCTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MSFLYVSTDSSSSRNCVSKSRER*ARTSVR Trigger: CCTGACAGATGTTCTGGCCAACCTCTCCCTGGACTT...ACTCACACAGTTGCGAGAAGAGCTGCTGTCTGTGGACACGTAGAGAAAGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | ACGTCAGGGTGGAACTGGACTTTAAGGAACAGAGTGCCGTCCAGGGCATCTGGGTTCGTCCCGTGGATGTaGAAGTTCTTGTTTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSGWNWTLRNRVPSRASGFVPWM*KFLFLG Trigger: ACCAAGAAACAAGAACTTCAACATCCACGGGACGAA...CCCAGATGCCCTGGACGGCACTCTGTTCCTTAAAGTCCAGTTCCACCCTGACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | CTCTACTGCCTGCTGGCCTCTCAGTATCACCAAAGTTGCTGGGGTCACATGAGGTTTGAGACCAGCATCTaGCTGGTCTGGTTTGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LYCLLASQYHQSCWGHMRFETSI*LVWFGL Trigger: CAAACCAAACCAGACCAGCAAGATGCTGGTCTCAAA...CCTCATGTGACCCCAGCAACTTTGGTGATACTGAGAGGCCAGCAGGCAGTAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 90 bp | CCAGCACGTCTGACCTCCAGGTTAAGTTTCTGTCTCCTTTCAGAATaGGCAGCAGGGACATCCCATCCATCTGTGTCTTGTTCAGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PARLTSRLSFCLLSE*AAGTSHPSVSCSGH Trigger: ATGACCTGAACAAGACACAGATGGATGGGATGTCCCTGCTGCCCATTCTGAAAGGAGACAGAAACTTAACCTGGAGGTCAGACGTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | ACGTCAGGGTGGAACTGGACTTTAAGGAACAGAGTGCCGTCCAGGGCATCTGGGTGGATGTTGAAGTTCTaGTTTCTTGGTGCGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: TSGWNWTLRNRVPSRASGWMLKF*FLGAMT Trigger: TGTCATCGCACCAAGAAACAAGAACTTCAACATCCA...CCCAGATGCCCTGGACGGCACTCTGTTCCTTAAAGTCCAGTTCCACCCTGACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | ATGTCCTTTCTCTACGTGTCCACAGACAGCAGCTCTTCTCGCAACTGTGTGAGTTTCGTCATGGGAGTCTaGGCTTGCCTGATTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MSFLYVSTDSSSSRNCVSFVMGV*ACLISQ Trigger: CTGGCTAATCAGGCAAGCCAAGACTCCCATGACGAA...ACTCACACAGTTGCGAGAAGAGCTGCTGTCTGTGGACACGTAGAGAAAGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | CTCTACTGCCTGCTGGCCTCTCAGTATCACCAAAGTTGCTGGGGTCACATGAGGATACTCTTGGCAATGTaGGTGATCTGGTCTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: LYCLLASQYHQSCWGHMRILLAM*VIWSGS Trigger: AGATCCAGACCAGATCACCAACATTGCCAAGAGTAT...CCTCATGTGACCCCAGCAACTTTGGTGATACTGAGAGGCCAGCAGGCAGTAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | GTCGCCTGCTTTCAGGAGCCGGCTATAAAACTGAAGACTCTAACATCTCAATCCGCTGCCGTTTGTCTATaGGCAAAGAGAACTGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VACFQEPAIKLKTLTSQSAAVCL*AKRTAL Trigger: CAGGGCAGTTCTCTTTGCCAATAGACAAACGGCAGC...GGATTGAGATGTTAGAGTCTTCAGTTTTATAGCCGGCTCCTGAAAGCAGGCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 90 bp | TCATCTAAGAACCGTATTGACGAGTTCGTCATGGGAGTCTTGGCTTaGCTGATTAGCCAGTGCTTGTTCGTCCCGTGGATGTTGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSKNRIDEFVMGVLA*LISQCLFVPWMLKF Trigger: GAACTTCAACATCCACGGGACGAACAAGCACTGGCTAATCAGGCAAGCCAAGACTCCCATGACGAACTCGTCAATACGGTTCTTAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 90 bp | CTTGCTGGTCTGGTTTGGTTTGATGCCGGGCCCTCGAACCAACAGTaGAACTTTGATATCAAACTCATACAGCTGCCGTTTGTCTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAGLVWFDAGPSNQQ*NFDIKLIQLPFVYW Trigger: CCAATAGACAAACGGCAGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGGCCCGGCATCAAACCAAACCAGACCAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | GAGTCCAGTCTCTTCACCAGTTTCTCCACAAGGTCGTCAACTGAGAGCAGGGTTTGGATGTTGAAGTTCTaGTTTCTTGGTGCGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: ESSLFTSFSTRSSTESRVWMLKF*FLGAMT Trigger: TGTCATCGCACCAAGAAACAAGAACTTCAACATCCA...AACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAGACTGGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS-3UTR CAA 90 bp | AAGATATACGTGTTGTCCAGCTCTCCGGTCGAGTCCAGTCTCTTCACCAGTTTCTTCGTCCCGTGGATGTaGAAGTTCTTGTTTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KIYVLSSSPVESSLFTSFFVPWM*KFLFLG Trigger: ACCAAGAAACAAGAACTTCAACATCCACGGGACGAA...GAAACTGGTGAAGAGACTGGACTCGACCGGAGAGCTGGACAACACGTATATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS GCA 90 bp | CTCAGGGTCTATACTCTTGGCAATGTTGGTGATCTGGTCTGGATCTaGAGTGATATTGTAGACTTCGACAAATACCTCCTGGTCGTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRVYTLGNVGDLVWI*SDIVDFDKYLLVVE Trigger: TTCGACGACCAGGAGGTATTTGTCGAAGTCTACAATATCACTGCAGATCCAGACCAGATCACCAACATTGCCAAGAGTATAGACCCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS-3UTR CAA 90 bp | ATGACAGCTCCAGGCAGAGGAACTTCTACAACAGCTGATGAGAATTTACAAAGTTCATACAGCTGCCGTTaGTCTATTGGCAAAGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: MTAPGRGTSTTADENLQSSYSCR*SIGKEN Trigger: GTTCTCTTTGCCAATAGACAAACGGCAGCTGTATGA...ACTTTGTAAATTCTCATCAGCTGTTGTAGAAGTTCCTCTGCCTGGAGCTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 90 bp | TGGCTGGCGCTAGAGAAAGTCATCCCCTTCTCTCCGATGAGGGCCTaGGTTTTCTTCAGTGGCGTCATGCCGCCGAGCTCCGCGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WLALEKVIPFSPMRA*VFFSGVMPPSSASW Trigger: CCAGGACGCGGAGCTCGGCGGCATGACGCCACTGAAGAAAACCAAGGCCCTCATCGGAGAGAAGGGGATGACTTTCTCTAGCGCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219249.2 |
||
| CDS GCA 72 bp | CTTGGTGCGATGACATTCTGGAAAGCCTTCTGGTACTaGGGAGCAGCCGTCCACGGTGAGTGGGGCGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGAMTFWKAFWY*GAAVHGEWGAG Trigger: TCCAGCGCCCCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 72 bp | GCCTTCTGGTACTGCGGAGCAGCCGTCCACGGTGAGTaGGGCGCTGGAGTGGAGATCATCATGAAGAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: AFWYCGAAVHGE*GAGVEIIMKNG Trigger: GCCATTCTTCATGATGATCTCCACTCCAGCGCCCCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 72 bp | ACGCAGGTCAAACCTGTACCCAGGGTCAAAGACCCCTaGAGTGCGACAGGTCGGCCCAGAACAGGACTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TQVKPVPRVKDP*SATGRPRTGLQ Trigger: CTGCAGTCCTGTTCTGGGCCGACCTGTCGCACTCCAGGGGTCTTTGACCCTGGGTACAGGTTTGACCTGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 72 bp | GGCCTGTCAGTGTGTTTCATCTGCACTCGCCATCTTTaGTGCATCCCCATGCCGCCGAGCTCCGCGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLSVCFICTRHL*CIPMPPSSASW Trigger: CCAGGACGCGGAGCTCGGCGGCATGGGGATGCACAAAAGATGGCGAGTGCAGATGAAACACACTGACAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS CAA 90 bp | ACATGTGCAGGCCTGTCAGTGTGTTTCATCTGCACTCGCCATCTTTaGTGCATCCCCATGCCGCCGAGCTCCGCGTCCTGGTCGTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TCAGLSVCFICTRHL*CIPMPPSSASWSSV Trigger: CACCGACGACCAGGACGCGGAGCTCGGCGGCATGGGGATGCACAAAAGATGGCGAGTGCAGATGAAACACACTGACAGGCCTGCACATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS GCA 72 bp | GGTCAAACCTGTACCCAGGGTCAAAGACCCCTGGAGTaGGACAGGTCGGCCCAGAACAGGACTGCAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: GQTCTQGQRPLE*DRSAQNRTAAS Trigger: TGATGCTGCAGTCCTGTTCTGGGCCGACCTGTCGCACTCCAGGGGTCTTTGACCCTGGGTACAGGTTTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 72 bp | CTTGGTGCGATGACATTCTGGAAAGCCTTCTGGTACTaGGGAGCAGCCGTCCACGGTGAGTGGGGCGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LGAMTFWKAFWY*GAAVHGEWGAE Trigger: TTCTGCGCCCCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219505.2 |
||
| CDS GCA 72 bp | CTGTCAGTGTGTTTCATCTGCACTCGCCATCTTTTGTaGATCCCCATGCCGCCGAGCTCCGCGTCCTGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LSVCFICTRHLL*IPMPPSSASWS Trigger: CGACCAGGACGCGGAGCTCGGCGGCATGGGGATGCACAAAAGATGGCGAGTGCAGATGAAACACACTGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS GCA 72 bp | CTGGGGATTGAACCCAGGGCCTTGCATACTCAGGCATaGACTCTCCCACTGAGCCACATGTGCAGGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGIEPRALHTQA*TLPLSHMCRPV Trigger: GACAGGCCTGCACATGTGGCTCAGTGGGAGAGTGCATGCCTGAGTATGCAAGGCCCTGGGTTCAATCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS TCA 72 bp | GAAAGCCTTCTGGTACTGCGGAGCAGCCGTCCACGGTaGGTGGGGCGCTGGAGTGGAGATCATCATGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ESLLVLRSSRPR*VGRWSGDHHEE Trigger: TTCTTCATGATGATCTCCACTCCAGCGCCCCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS TCA 72 bp | GGGCAGGTCGGGTCGGTGACATTCCGGCCTTCTCCTTaGTATTCCACCAGCACGTCTGACCTCCAGGTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: GQVGSVTFRPSP*YSTSTSDLQVK Trigger: CTTAACCTGGAGGTCAGACGTGCTGGTGGAATATCAAGGAGAAGGCCGGAATGTCACCGACCCGACCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 72 bp | CGACGTGGTGGTTGTGGGGGTACTTTCCAGTCAGGATaGTGGCTGGCGCTAGAGAAAGTCATCCCCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRGGCGGTFQSG*WLALEKVIPFS Trigger: AGAGAAGGGGATGACTTTCTCTAGCGCCAGCCAGCATCCTGACTGGAAAGTACCCCCACAACCACCACGTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219249.2 |
||
| CDS CCA 72 bp | TTGTTTCTTGGTGCGATGACATTCTGGAAAGCCTTCTaGTACTGCGGAGCAGCCGTCCACGGTGAGTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LFLGAMTFWKAF*YCGAAVHGEWG Trigger: GCCCCACTCACCGTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040344.7 ENSMUST00000219505.2 |
||
| CDS CAA 72 bp | CTAGAGAAAGTCATCCCCTTCTCTCCGATGAGGGCCTaGGTTTTCTTCAGTGGCGTCATGCCGCCGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LEKVIPFSPMRA*VFFSGVMPPSS Trigger: GGAGCTCGGCGGCATGACGCCACTGAAGAAAACCAAGGCCCTCATCGGAGAGAAGGGGATGACTTTCTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040344.7 ENSMUST00000219249.2 |
||
| CDS TCA 72 bp | CAGTCTCTTCACCAGTTTCTCCACAAGGTCGTCAACTaGGAGCAGGGTTTGCCACCTCCTCCTGAAGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: QSLHQFLHKVVN*EQGLPPPPEGV Trigger: GACGCCTTCAGGAGGAGGTGGCAAACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACTGGTGAAGAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS TCA 72 bp | ACACTCCAGGACTCAAAGAAGGGCAGGTCGGGTCGGTaGCATTCCGGCCTTCTCCTTGATATTCCACCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TLQDSKKGRSGR*HSGLLLDIPPA Trigger: TGCTGGTGGAATATCAAGGAGAAGGCCGGAATGTCACCGACCCGACCTGCCCTTCTTTGAGTCCTGGAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 72 bp | CATACTCAGGCATGCACTCTCCCACTGAGCCACATGTaGAGGCCTGTCAGTGTGTTTCATCTGCACTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HTQACTLPLSHM*RPVSVFHLHSP Trigger: TGGCGAGTGCAGATGAAACACACTGACAGGCCTGCACATGTGGCTCAGTGGGAGAGTGCATGCCTGAGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219851.2 |
||
| CDS TCA 72 bp | TCCACGGTGAGTGGGGCGCTGGAGTGGAGATCATCATaGAGAATGGCTCAGAGTTGGACTTGTAGTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: STVSGALEWRSS*RMAQSWTCSPG Trigger: TCCTGGACTACAAGTCCAACTCTGAGCCATTCTTCATGATGATCTCCACTCCAGCGCCCCACTCACCGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS TCA 72 bp | TTGTACGCGTCTTCACACACACAGTCCGGGAAACATTaGGACACTCCAGGACTCAAAGAAGGGCAGGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LYASSHTQSGKH*DTPGLKEGQVG Trigger: CCCGACCTGCCCTTCTTTGAGTCCTGGAGTGTCTCAATGTTTCCCGGACTGTGTGTGTGAAGACGCGTACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 72 bp | CCCAAGTCGATGTTTGAGACCAGCATCTTGCTGGTCTaGTTTGGTTTGATGCCGGGCCCTCGAACCAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: PKSMFETSILLV*FGLMPGPRTNS Trigger: ACTGTTGGTTCGAGGGCCCGGCATCAAACCAAACCAGACCAGCAAGATGCTGGTCTCAAACATCGACTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 72 bp | TCTTGTTCAGGTCATAGCCAGCGAGGTCCAGGATGGTaGGACCCAAGTCGATGTTTGAGACCAGCATCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCSGHSQRGPGW*DPSRCLRPASC Trigger: GCAAGATGCTGGTCTCAAACATCGACTTGGGTCCCACCATCCTGGACCTCGCTGGCTATGACCTGAACAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 72 bp | GTTGTACGCGTCTTCACACACACAGTCCGGGAAACATaGAGACACTCCAGGACTCAAAGAAGGGCAGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VVRVFTHTVRET*RHSRTQRRAGR Trigger: CCGACCTGCCCTTCTTTGAGTCCTGGAGTGTCTCAATGTTTCCCGGACTGTGTGTGTGAAGACGCGTACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 90 bp | GTAGGTATTGTTGTACGCGTCTTCACACACACAGTCCGGGAAACATaGAGACACTCCAGGACTCAAAGAAGGGCAGGTCGGGTCGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VGIVVRVFTHTVRET*RHSRTQRRAGRVGD Trigger: GTCACCGACCCGACCTGCCCTTCTTTGAGTCCTGGAGTGTCTCAATGTTTCCCGGACTGTGTGTGTGAAGACGCGTACAACAATACCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS TCA 72 bp | GGATGCTTCGAGAACCTTCTCGTTCTGACGCTGCCGTaGCTGTTGAACATGAGACGCAGGTCAAACCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: GCFENLLVLTLP*LLNMRRRSNLY Trigger: GTACAGGTTTGACCTGCGTCTCATGTTCAACAGTCACGGCAGCGTCAGAACGAGAAGGTTCTCGAAGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 72 bp | AACCGTATTGACGAGTTCGTCATGGGAGTCTTGGCTTaGCTGATTAGCCAGTGCTTGTTCGTCCCGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: NRIDEFVMGVLA*LISQCLFVPWM Trigger: CATCCACGGGACGAACAAGCACTGGCTAATCAGGCAAGCCAAGACTCCCATGACGAACTCGTCAATACGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 72 bp | AGTTTCTCCACAAGGTCGTCAACTGAGAGCAGGGTTTaGCACCTCCTCCTGAAGGCGTCATCTAAGAACCGT | + |
|
Preference number: 6 (lower is better) Translates to: SFSTRSSTESRV*HLLLKASSKNR Trigger: ACGGTTCTTAGATGACGCCTTCAGGAGGAGGTGGCAAACCCTGCTCTCAGTTGACGACCTTGTGGAGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 90 bp | AAGGCGTCATCTAAGAACCGTATTGACGAGTTCGTCATGGGAGTCTaGGCTTGCCTGATTAGCCAGTGCTTGTTCGTCCCGTGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KASSKNRIDEFVMGV*ACLISQCLFVPWML Trigger: CAACATCCACGGGACGAACAAGCACTGGCTAATCAGGCAAGCCAAGACTCCCATGACGAACTCGTCAATACGGTTCTTAGATGACGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 72 bp | TCTAAGAACCGTATTGACGAGTTCGTCATGGGAGTCTaGGCTTGCCTGATTAGCCAGTGCTTGTTCGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SKNRIDEFVMGV*ACLISQCLFVP Trigger: CGGGACGAACAAGCACTGGCTAATCAGGCAAGCCAAGACTCCCATGACGAACTCGTCAATACGGTTCTTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 72 bp | ATGTTTGAGACCAGCATCTTGCTGGTCTGGTTTGGTTaGATGCCGGGCCCTCGAACCAACAGTGGAACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: MFETSILLVWFG*MPGPRTNSGTL Trigger: CAAAGTTCCACTGTTGGTTCGAGGGCCCGGCATCAAACCAAACCAGACCAGCAAGATGCTGGTCTCAAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 90 bp | CCCAAGTCGATGTTTGAGACCAGCATCTTGCTGGTCTGGTTTGGTTaGATGCCGGGCCCTCGAACCAACAGTGGAACTTTGATATCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PKSMFETSILLVWFG*MPGPRTNSGTLISN Trigger: GTTTGATATCAAAGTTCCACTGTTGGTTCGAGGGCCCGGCATCAAACCAAACCAGACCAGCAAGATGCTGGTCTCAAACATCGACTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 72 bp | GTTCGTCCCGTGGATGTTGAAGTTCTTGTTTCTTGGTaGGATGACATTCTGGAAAGCCTTCTGGTACTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VRPVDVEVLVSW*DDILESLLVLR Trigger: CCGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAAGAACTTCAACATCCACGGGACGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040344.7 ENSMUST00000219505.2 |
||
| CDS CCA 72 bp | ATGTTGAAGTTCTTGTTTCTTGGTGCGATGACATTCTaGAAAGCCTTCTGGTACTGCGGAGCAGCCGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MLKFLFLGAMTF*KAFWYCGAAVH Trigger: GTGGACGGCTGCTCCGCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAAGAACTTCAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040344.7 ENSMUST00000219505.2 |
||
| CDS CCA 72 bp | CTGACCTCCAGGTTAAGTTTCTGTCTCCTTTCAGAATaGGCAGCAGGGACATCCCATCCATCTGTGTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LTSRLSFCLLSE*AAGTSHPSVSC Trigger: ACAAGACACAGATGGATGGGATGTCCCTGCTGCCCATTCTGAAAGGAGACAGAAACTTAACCTGGAGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 90 bp | TGCCTGATTAGCCAGTGCTTGTTCGTCCCGTGGATGTTGAAGTTCTaGTTTCTTGGTGCGATGACATTCTGGAAAGCCTTCTGGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: CLISQCLFVPWMLKF*FLGAMTFWKAFWYC Trigger: GCAGTACCAGAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAAGAACTTCAACATCCACGGGACGAACAAGCACTGGCTAATCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 72 bp | CTGGTTTGGTTTGATGCCGGGCCCTCGAACCAACAGTaGAACTTTGATATCAAACTCATACAGCTGCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LVWFDAGPSNQQ*NFDIKLIQLPF Trigger: AAACGGCAGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGGCCCGGCATCAAACCAAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 72 bp | AGCCAGTGCTTGTTCGTCCCGTGGATGTTGAAGTTCTaGTTTCTTGGTGCGATGACATTCTGGAAAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SQCLFVPWMLKF*FLGAMTFWKAF Trigger: GAAGGCTTTCCAGAATGTCATCGCACCAAGAAACAAGAACTTCAACATCCACGGGACGAACAAGCACTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040344.7 ENSMUST00000219505.2 |
||
| CDS CAA 72 bp | TGCCTGATTAGCCAGTGCTTGTTCGTCCCGTGGATGTaGAAGTTCTTGTTTCTTGGTGCGATGACATTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CLISQCLFVPWM*KFLFLGAMTFW Trigger: CCAGAATGTCATCGCACCAAGAAACAAGAACTTCAACATCCACGGGACGAACAAGCACTGGCTAATCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 90 bp | GTCTGGTTTGGTTTGATGCCGGGCCCTCGAACCAACAGTGGAACTTaGATATCAAACTCATACAGCTGCCGTTTGTCTATTGGCAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VWFGLMPGPRTNSGT*ISNSYSCRLSIGKE Trigger: CTCTTTGCCAATAGACAAACGGCAGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGGCCCGGCATCAAACCAAACCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CAA 72 bp | GGTTTGATGCCGGGCCCTCGAACCAACAGTGGAACTTaGATATCAAACTCATACAGCTGCCGTTTGTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: GLMPGPRTNSGT*ISNSYSCRLSI Trigger: AATAGACAAACGGCAGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGGCCCGGCATCAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS CCA 72 bp | TTTGATATCAAACTCATACAGCTGCCGTTTGTCTATTaGCAAAGAGAACTGCCCTGTGTGGTAGCCGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: FDIKLIQLPFVY*QRELPCVVAVV Trigger: GACAACGGCTACCACACAGGGCAGTTCTCTTTGCCAATAGACAAACGGCAGCTGTATGAGTTTGATATCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||
| CDS GCA 72 bp | TATACTCTTGGCAATGTTGGTGATCTGGTCTGGATCTaGAGTGATATTGTAGACTTCGACAAATACCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: YTLGNVGDLVWI*SDIVDFDKYLL Trigger: CAGGAGGTATTTGTCGAAGTCTACAATATCACTGCAGATCCAGACCAGATCACCAACATTGCCAAGAGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040344.7 |
||