Pregenerated sensors for GNPTG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035521Ensembl transcript IDs: ENSMUST00000038973.7, ENSMUST00000115154.11
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCACCCTGGGTCCCATCCCATGCGGGGAGCTTTCCTGAGCATCTaGTCTTCTGGAATCAGGCTGAGCTCTGAGGACAGGTGTGCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: VHPGSHPMRGAFLSI*SSGIRLSSEDRCAG Trigger: CCCTGCACACCTGTCCTCAGAGCTCAGCCTGATTCCAGAAGAGCAGATGCTCAGGAAAGCTCCCCGCATGGGATGGGACCCAGGGTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR TCA 90 bp | GGGAGCTTTCCTGAGCATCTGCTCTTCTGGAATCAGGCTGAGCTCTaGGGACAGGTGTGCAGGGGAGGACCAAAGAACGTCCCAGAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: GSFPEHLLFWNQAEL*GQVCRGGPKNVPEG Trigger: CCCTTCTGGGACGTTCTTTGGTCCTCCCCTGCACACCTGTCCTCAGAGCTCAGCCTGATTCCAGAAGAGCAGATGCTCAGGAAAGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR CCA 90 bp | ATTCCAGACCTCTTAGGAGCTGAGGCTTCTAGGATCTACCCTGGGTaGGAAGGGCCAAGAAGGGGAGAGAGAGCCTTAAGGCCCGTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: IPDLLGAEASRIYPG*EGPRRGERALRPVC Trigger: ACACACGGGCCTTAAGGCTCTCTCTCCCCTTCTTGGCCCTTCCCACCCAGGGTAGATCCTAGAAGCCTCAGCTCCTAAGAGGTCTGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR CCA 90 bp | ACTTTGAATCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTaGCCAGCAGGTCCCTCTTGTTTGTCAGTGACACTGTCTGATCTA | + |
|
Preference number: 1 (lower is better) Translates to: TLNLYFVWIFGHNKG*PAGPSCLSVTLSDL Trigger: TAGATCAGACAGTGTCACTGACAAACAAGAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGATTCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| 3UTR TCA 90 bp | TCCCATGTCAGGCTTTTGGTCTCTGTGGTAACAGGACAGTGTTTGTaGTTGATAGCTCATCGGGACAATTTCAAGTTGTATACAGTTACA | + |
|
Preference number: 1 (lower is better) Translates to: SHVRLLVSVVTGQCL*LIAHRDNFKLYTVT Trigger: TGTAACTGTATACAACTTGAAATTGTCCCGATGAGCTATCAATCACAAACACTGTCCTGTTACCACAGAGACCAAAAGCCTGACATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTCCTGAGCATCTGCTCTTCTGGAATCAGGCTGAGCTCTGAGGACAGGTGTCTTAAGGCCCGTGTGTaGGTAATGGAGGTGGGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: AFLSICSSGIRLSSEDRCLKARV*VMEVGP Trigger: TGGCCCCACCTCCATTACCCACACACGGGCCTTAAG...ACACCTGTCCTCAGAGCTCAGCCTGATTCCAGAAGAGCAGATGCTCAGGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR-3UTR CCA 90 bp | GATTTATTAGCTCAGTACCTAGATCATGTGTATTTTGTGCTACTGTTATCATGGGCTGACATTCCAGGCTaGGGCTGGGCAGTTCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: DLLAQYLDHVYFVLLLSWADIPG*GWAVLG Trigger: CCCCAGAACTGCCCAGCCCCAGCCTGGAATGTCAGC...CCATGATAACAGTAGCACAAAATACACATGATCTAGGTACTGAGCTAATAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR-3UTR TCA 90 bp | ATCATTTTAAAGGAAATGGATCTTCAACATTCCACAGCTAGCCCACTACTTAATTGCGGGGAGCTTTCCTaGGCATCTGCTCTTCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: IILKEMDLQHSTASPLLNCGELS*ASALLE Trigger: TTCCAGAAGAGCAGATGCTCAGGAAAGCTCCCCGCA...ATTAAGTAGTGGGCTAGCTGTGGAATGTTGAAGATCCATTTCCTTTAAAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTGAATCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGTTTTGTTCACTCTGTaGAAGGACACTCAAAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TLNLYFVWIFGHNKGWPAVLFTL*KDTQSS Trigger: TGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAAC...TGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGATTCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| 3UTR-3UTR TCA 90 bp | TGGATGCGCATGTGGATTAACTTATGGAAGCCTTTGTGTTCATTTGTTCTCAGAGTTTTGTTCACTCTGTaGAAGGACACTCAAAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: WMRMWINLWKPLCSFVLRVLFTL*KDTQSS Trigger: TGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAAC...TCTGAGAACAAATGAACACAAAGGCTTCCATAAGTTAATCCACATGCGCATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCCCCAGTATGGATGCGCATGTGGATTAACTTATGGAAGCCTTTGTGTTCAATAGCATTTATGCAATaGTTTACAGAAGTCATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LPPVWMRMWINLWKPLCSIAFMQ*FTEVME Trigger: CTCCATGACTTCTGTAAACCATTGCATAAATGCTAT...TGAACACAAAGGCTTCCATAAGTTAATCCACATGCGCATCCATACTGGGGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR CCA 72 bp | GTTGTGATGGCTGGGGAGGCAGGCGGTAGTGCACCCTaGGTCCCATCCCATGCGGGGAGCTTTCCTGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VVMAGEAGGSAP*VPSHAGSFPEH Trigger: ATGCTCAGGAAAGCTCCCCGCATGGGATGGGACCCAGGGTGCACTACCGCCTGCCTCCCCAGCCATCACAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR TCA 72 bp | GGCCATGGGTCTAGGAACTGGGACCCACCACTGTCCTaGTGCCTGTTGTCGTCTAACTCTCTAGTGTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: GHGSRNWDPPLS*CLLSSNSLVLN Trigger: ATTCAACACTAGAGAGTTAGACGACAACAGGCATCAGGACAGTGGTGGGTCCCAGTTCCTAGACCCATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR CCA 72 bp | CAGTATATGGTAGTGTCAGAGTCTTGTGTACCTGGTTaGCAGGCCTTCCCCCAGTATGGATGCGCATGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QYMVVSESCVPG*QAFPQYGCACG Trigger: TCCACATGCGCATCCATACTGGGGGAAGGCCTGCCAACCAGGTACACAAGACTCTGACACTACCATATACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR CCA 72 bp | GTCTTGTGTACCTGGTTGGCAGGCCTTCCCCCAGTATaGATGCGCATGTGGATTAACTTATGGAAGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VLCTWLAGLPPV*MRMWINLWKPL Trigger: CAAAGGCTTCCATAAGTTAATCCACATGCGCATCCATACTGGGGGAAGGCCTGCCAACCAGGTACACAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR GCA 72 bp | TGTGTACCTGGTTGGCAGGCCTTCCCCCAGTATGGATaGGCATGTGGATTAACTTATGGAAGCCTTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CVPGWQAFPQYG*ACGLTYGSLCV Trigger: AACACAAAGGCTTCCATAAGTTAATCCACATGCGCATCCATACTGGGGGAAGGCCTGCCAACCAGGTACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAGTATGGATGCGCATGTGGATTAACTTATGGAAGCCTTTGTGTTCATTTGATTTTGTCTGGATCTTaGGGCACAACAAAGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PQYGCACGLTYGSLCVHLILSGS*GTTKAG Trigger: GCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAAT...CAAATGAACACAAAGGCTTCCATAAGTTAATCCACATGCGCATCCATACTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR TCA 72 bp | AGCCGTGTCTACACCACACCAGTTTTGTTCACTCTGTaGAAGGACACTCAAAGCTCAGGATATTTCTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SRVYTTPVLFTL*KDTQSSGYFYS Trigger: AGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACTGGTGTGGTGTAGACACGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| 3UTR TCA 72 bp | AGGCTTTTGGTCTCTGTGGTAACAGGACAGTGTTTGTaGTTGATAGCTCATCGGGACAATTTCAAGTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RLLVSVVTGQCL*LIAHRDNFKLY Trigger: ATACAACTTGAAATTGTCCCGATGAGCTATCAATCACAAACACTGTCCTGTTACCACAGAGACCAAAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR-3UTR CAA 90 bp | GATTTATTAGCTCAGTACCTAGATCATGTGTATTTTGTGCTACTGTTATCATGGAACTTATGGAAGCCTTaGTGTTCATTTGTTCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DLLAQYLDHVYFVLLLSWNLWKP*CSFVLR Trigger: TCTGAGAACAAATGAACACAAAGGCTTCCATAAGTT...CCATGATAACAGTAGCACAAAATACACATGATCTAGGTACTGAGCTAATAAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| 3UTR-3UTR CAA 90 bp | GATTTATTAGCTCAGTACCTAGATCATGTGTATTTTGTGCTACTGTTATCATGGCGGGACAATTTCAAGTaGTATACAGTTACATTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: DLLAQYLDHVYFVLLLSWRDNFK*YTVTLS Trigger: GCTTAATGTAACTGTATACAACTTGAAATTGTCCCG...CCATGATAACAGTAGCACAAAATACACATGATCTAGGTACTGAGCTAATAAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR TCA 90 bp | GGAGGTGGGGCCATGGGTCTAGGAACTGGGACCCACCACTGTCCTGATGCCTGTGGCTCTCTCTTGGGCTaGAGGCGGCTTGCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGAMGLGTGTHHCPDACGSLLG*RRLAWG Trigger: GCCCCAGGCAAGCCGCCTTCAGCCCAAGAGAGAGCC...ACAGGCATCAGGACAGTGGTGGGTCCCAGTTCCTAGACCCATGGCCCCACCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | GCACCCTGGGTCCCATCCCATGCGGGGAGCTTTCCTGAGCATCTGCTCTTCTGGCAAGCCCCAGGCCCTTaGAACCTCCTGCCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: APWVPSHAGSFPEHLLFWQAPGP*NLLPAG Trigger: CCCAGCTGGCAGGAGGTTCCAAGGGCCTGGGGCTTG...CCAGAAGAGCAGATGCTCAGGAAAGCTCCCCGCATGGGATGGGACCCAGGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | GCACCCTGGGTCCCATCCCATGCGGGGAGCTTTCCTGAGCATCTGCTCTTCTGGAGAAGAGAGCCTGAGTaGCTTGCTCTGCCGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: APWVPSHAGSFPEHLLFWRREPE*LALPAP Trigger: CGGAGCCGGCAGAGCAAGCCACTCAGGCTCTCTTCT...CCAGAAGAGCAGATGCTCAGGAAAGCTCCCCGCATGGGATGGGACCCAGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | CACAACAAAGGCTGGCCAGCAGGTCCCTCTTGTTTGTCAGTGACACTGTCTGATAGCTCCACCTTGCTCTaGCGGCTCCGGGAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HNKGWPAGPSCLSVTLSDSSTLL*RLREWQ Trigger: CTGCCACTCCCGGAGCCGGCAGAGCAAGGTGGAGCT...ATCAGACAGTGTCACTGACAAACAAGAGGGACCTGCTGGCCAGCCTTTGTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038973.7 |
||
| CDS-3UTR GCA 90 bp | GCTTTCCTGAGCATCTGCTCTTCTGGAATCAGGCTGAGCTCTGAGGACAGGTGTACCTGGTCCCAGCGCTaGTGCAGGGCCTCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFLSICSSGIRLSSEDRCTWSQR*CRASDR Trigger: TCTGTCAGAGGCCCTGCAGCAGCGCTGGGACCAGGT...ACACCTGTCCTCAGAGCTCAGCCTGATTCCAGAAGAGCAGATGCTCAGGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | TGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTTGTTTGTCGCCCTTGGAACCTCCTaGCAGCTGGGTGGGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLDLWAQQRLASRSLLFVALGTS*QLGGMG Trigger: ACCCATCCCACCCAGCTGGCAGGAGGTTCCAAGGGC...GACAAACAAGAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | TGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTTGTTTGTCTTCCAGCGGAAGGTCTaGTCGTGCTGGGTGACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLDLWAQQRLASRSLLFVFQRKV*SCWVTL Trigger: CAACGTCACCCAGCACGAGCAGACCTTCCGCTGGAA...GACAAACAAGAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTTGTGTACCTGGTTGGCAGGCCTTCCCCCAGTATGGATGCGCATGTGGATGCATAGACACAGGTaGTTGGCTCAGACACGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLCTWLAGLPPVWMRMWMHRHR*LAQTRG Trigger: CCCACGTGTCTGAGCCAAGCACCTGTGTCTATGCAT...CCACATGCGCATCCATACTGGGGGAAGGCCTGCCAACCAGGTACACAAGACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCGCCCTTGGAACCTCCTaGCAGCTGGGTGGGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLFCLDLWAQQRLASRSLALGTS*QLGGMG Trigger: ACCCATCCCACCCAGCTGGCAGGAGGTTCCAAGGGC...GAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | TGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTTGTTTGTCGTGTGGGGGATTCCATaGTGTTGCAGCAGACTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLDLWAQQRLASRSLLFVVWGIP*CCSRLV Trigger: GACGAGTCTGCTGCAACAGCATGGAATCCCCCACAC...GACAAACAAGAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | AAGCCGTGTCTACACCACACCAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCAAGCCCCAGGCCCTTaGAACCTCCTGCCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPCLHHTSFVHSVKGHSKQAPGP*NLLPAG Trigger: CCCAGCTGGCAGGAGGTTCCAAGGGCCTGGGGCTTG...CTTTGAGTGTCCTTTCACAGAGTGAACAAAACTGGTGTGGTGTAGACACGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR TCA 90 bp | TGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTCGTGGCGGCTCTCTCTTGGGCTaGAGGCGGCTTGCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCERTLKAQDISILRGGSLLG*RRLAWG Trigger: GCCCCAGGCAAGCCGCCTTCAGCCCAAGAGAGAGCC...GCCACGAAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR TCA 90 bp | TCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCGTGGTTTCTGTGGGCTaGGTGTGGGGGATTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLFCLDLWAQQRLASRSLVVSVG*VWGIPC Trigger: GCATGGAATCCCCCACACTCAGCCCACAGAAACCAC...GAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR TCA 90 bp | GCCGTGTCTACACCACACCAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGTGAGCTCCACCTaGGAAGAGAGCCTGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVSTPHQFCSLCERTLKAQVSST*EESLSG Trigger: GCCACTCAGGCTCTCTTCTCAGGTGGAGCTCACCTG...AGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACTGGTGTGGTGTAGACACGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTTCCAGCGGAAGGTCTaGTCGTGCTGGGTGACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFCLDLWAQQRLASRSLFQRKV*SCWVTL Trigger: CAACGTCACCCAGCACGAGCAGACCTTCCGCTGGAA...GAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | CACAACAAAGGCTGGCCAGCAGGTCCCTCTTGTTTGTCAGTGACACTGTCTGATAAGGTCTGCTCGTGCTaGGTGACGTTGTGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HNKGWPAGPSCLSVTLSDKVCSC*VTLWKG Trigger: CCCTTTCCACAACGTCACCCAGCACGAGCAGACCTT...ATCAGACAGTGTCACTGACAAACAAGAGGGACCTGCTGGCCAGCCTTTGTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| 3UTR CAA 72 bp | ACAGTATATGGTAGTGTCAGAGTCTTGTGTACCTGGTaGGCAGGCCTTCCCCCAGTATGGATGCGCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVYGSVRVLCTW*AGLPPVWMRMW Trigger: CCACATGCGCATCCATACTGGGGGAAGGCCTGCCAACCAGGTACACAAGACTCTGACACTACCATATACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR TCA 90 bp | AAGCCGTGTCTACACCACACCAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGACTTGCCAGCAAGTCTaGAGAGATGCAGGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPCLHHTSFVHSVKGHSKTCQQV*RDAGAR Trigger: CCGGGCCCCTGCATCTCTTCAGACTTGCTGGCAAGT...CTTTGAGTGTCCTTTCACAGAGTGAACAAAACTGGTGTGGTGTAGACACGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR TCA 90 bp | TTGAATCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTACTTGCCAGCAAGTCTaGAGAGATGCAGGGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LNLYFVWIFGHNKGWPAGTCQQV*RDAGAR Trigger: CCGGGCCCCTGCATCTCTTCAGACTTGCTGGCAAGT...ACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGATTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR TCA 90 bp | TGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTCGTGGCCCTGAGAAGAGAGCCTaGGTGGCTTGCTCTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCERTLKAQDISILRGPEKRA*VACSAG Trigger: GCCGGCAGAGCAAGCCACTCAGGCTCTCTTCTCAGG...GCCACGAAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTTCGGAAGGTCTGCTCGTaGTGGGTGACGTTGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FILSGSLGTTKAGQQVPLRKVCS*WVTLWK Trigger: TTTCCACAACGTCACCCAGCACGAGCAGACCTTCCG...AAGAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | ACTTTGAATCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAACCTGGTCCCAGCGCTaGTGCAGGGCCTCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLNLYFVWIFGHNKGWPATWSQR*CRASDR Trigger: TCTGTCAGAGGCCCTGCAGCAGCGCTGGGACCAGGT...TGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGATTCAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCAGTGAGTGGTTTCTGTaGGCTGAGTGTGGGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SLFCLDLWAQQRLASRSLSEWFL*AECGGF Trigger: GAATCCCCCACACTCAGCCCACAGAAACCACTCACT...GAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | AAAGGCTGGCCAGCAGGTCCCTCTTGTTTGTCAGTGACACTGTCTGATCTAGAAGGTGCTGAGAGTGAGTaGTTTCTGTGGGCTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGWPAGPSCLSVTLSDLEGAESE*FLWAEC Trigger: ACACTCAGCCCACAGAAACCACTCACTCTCAGCACC...TTCTAGATCAGACAGTGTCACTGACAAACAAGAGGGACCTGCTGGCCAGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR TCA 90 bp | TCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTCTTTGTACCTCCTGTaGCAGCTCTGCATGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLFCLDLWAQQRLASRSLSLYLL*QLCMCL Trigger: AAGGCACATGCAGAGCTGTCACAGGAGGTACAAAGA...GAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTTATGCATAGACACAGGTaGTTGGCTCAGACACGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FILSGSLGTTKAGQQVPLMHRHR*LAQTRG Trigger: CCCACGTGTCTGAGCCAAGCACCTGTGTCTATGCAT...AAGAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | AAGCCGTGTCTACACCACACCAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGGTGTGGGGGATTCCATaGTGTTGCAGCAGACTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KPCLHHTSFVHSVKGHSKVWGIP*CCSRLV Trigger: GACGAGTCTGCTGCAACAGCATGGAATCCCCCACAC...CTTTGAGTGTCCTTTCACAGAGTGAACAAAACTGGTGTGGTGTAGACACGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | TCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTCGTGGCCACCTTGGAACCTCCTGCCAGCTaGGTGGGATGGGTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVKGHSKLRIFLFFVATLEPPAS*VGWVSP Trigger: AGGAGAAACCCATCCCACCCAGCTGGCAGGAGGTTC...CAAGGTGGCCACGAAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | CCACACCAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTAAGGTCTGCTCGTGCTaGGTGACGTTGTGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQFCSLCERTLKAQDISKVCSC*VTLWKG Trigger: CCCTTTCCACAACGTCACCCAGCACGAGCAGACCTT...AGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACTGGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | TCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTCGTGGCCACCTTGAGTGAGTGGTTTCTGTaGGCTGAGTGTGGGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SVKGHSKLRIFLFFVATLSEWFL*AECGGF Trigger: GAATCCCCCACACTCAGCCCACAGAAACCACTCACT...CAAGGTGGCCACGAAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | TTGAATCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTATGATTTCCCACTCATaGCAGATGCCAAGGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNLYFVWIFGHNKGWPAGMISHS*QMPRIP Trigger: CGGGATCCTTGGCATCTGGCATGAGTGGGAAATCAT...ACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGATTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTTTACACTAACAAAGAGTaGGGATGGCAAACAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FILSGSLGTTKAGQQVPLYTNKE*GWQTRG Trigger: CCCTCTTGTTTGCCATCCCCACTCTTTGTTAGTGTA...AAGAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTCGTGGTTTCTGTGGGCTaGGTGTGGGGGATTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SFVHSVKGHSKLRIFLFFVVSVG*VWGIPC Trigger: GCATGGAATCCCCCACACTCAGCCCACAGAAACCAC...GAAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | AGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTCCGGAAGGTCTGCTCGTaGTGGGTGACGTTGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFVHSVKGHSKLRIFLFFRKVCS*WVTLWK Trigger: TTTCCACAACGTCACCCAGCACGAGCAGACCTTCCG...GAAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | CCACACCAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTTACACTAACAAAGAGTaGGGATGGCAAACAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQFCSLCERTLKAQDISYTNKE*GWQTRG Trigger: CCCTCTTGTTTGCCATCCCCACTCTTTGTTAGTGTA...AGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACTGGTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CCA 90 bp | CAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTGGTGCTGAGAGTGAGTaGTTTCTGTGGGCTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QFCSLCERTLKAQDISILGAESE*FLWAEC Trigger: ACACTCAGCCCACAGAAACCACTCACTCTCAGCACC...AAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR GCA 90 bp | CAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTGGGATTCCATGCTGTTaGAGCAGACTCGTCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFCSLCERTLKAQDISILGIPCC*SRLVSL Trigger: AAGACTGACGAGTCTGCTGCAACAGCATGGAATCCC...AAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS GCA 90 bp | CCCGAATGTGTTAGGCTCCTCCACCACCTTCATCTTCCCGGCACATaGCGGCGCGGGCCCCTGCGACGCGAGCCCCAGCAACATCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PECVRLLHHLHLPGT*RRGPLRREPQQHQE Trigger: TTCCTGATGTTGCTGGGGCTCGCGTCGCAGGGGCCCGCGCCGGCATGTGCCGGGAAGATGAAGGTGGTGGAGGAGCCTAACACATTCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS TCA 90 bp | GACACGTGGGCCAGTCGGTTGATCTTTCCACAGGTGAGCTCCACCTaGGAAGAGAGCCTGAGTGGCTTGCTCTGCCGGCTCCGGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DTWASRLIFPQVSST*EESLSGLLCRLREW Trigger: CCACTCCCGGAGCCGGCAGAGCAAGCCACTCAGGCTCTCTTCTCAGGTGGAGCTCACCTGTGGAAAGATCAACCGACTGGCCCACGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS GCA 90 bp | TGGGCCAGTCGGTTGATCTTTCCACAGGTGAGCTCCACCTTGCTCTaGCGGCTCCGGGAGTGGCAGGAGTCCCCATCAGTCATCCACATG | + |
|
Preference number: 5 (lower is better) Translates to: WASRLIFPQVSSTLL*RLREWQESPSVIHM Trigger: CATGTGGATGACTGATGGGGACTCCTGCCACTCCCGGAGCCGGCAGAGCAAGGTGGAGCTCACCTGTGGAAAGATCAACCGACTGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038973.7 |
||
| CDS CCA 90 bp | GTTGATCTTTCCACAGGTGAGCTCCACCTGAGAAGAGAGCCTGAGTaGCTTGCTCTGCCGGCTCCGGGAGTGGCAGGAGTCCCCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VDLSTGELHLRREPE*LALPAPGVAGVPIS Trigger: ACTGATGGGGACTCCTGCCACTCCCGGAGCCGGCAGAGCAAGCCACTCAGGCTCTCTTCTCAGGTGGAGCTCACCTGTGGAAAGATCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS TCA 90 bp | AAGAGATGCAGGGGCCCGGATACAGCTGAAGGCTCTCTCTTGGGCTaGAGGCGGCTTGCCTGGGGCAAGAACGGGTTATTCAGCCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KRCRGPDTAEGSLLG*RRLAWGKNGLFSPN Trigger: ATTCGGGCTGAATAACCCGTTCTTGCCCCAGGCAAGCCGCCTTCAGCCCAAGAGAGAGCCTTCAGCTGTATCCGGGCCCCTGCATCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CCA 90 bp | CCAGAGTCTCAAGCCCCAGGCCCTTGGAACCTCCTGCCAGCTGGGTaGGATGGGTTTCTCCTGGGACCTTTAAGTAGCCAGCATCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PESQAPGPWNLLPAG*DGFLLGPLSSQHPQ Trigger: TTGAGGATGCTGGCTACTTAAAGGTCCCAGGAGAAACCCATCCCACCCAGCTGGCAGGAGGTTCCAAGGGCCTGGGGCTTGAGACTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CCA 90 bp | ATCTTTCCACAGGTGAGCTCCACCTTGCTCTGCCGGCTCCGGGAGTaGCAGGAGTCCCCATCAGTCATCCACATGCCCTTGAAGGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: IFPQVSSTLLCRLRE*QESPSVIHMPLKVL Trigger: CAATACCTTCAAGGGCATGTGGATGACTGATGGGGACTCCTGCCACTCCCGGAGCCGGCAGAGCAAGGTGGAGCTCACCTGTGGAAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038973.7 |
||
| CDS CCA 90 bp | CTATGGGGAGCTGCTGACCCAGGTGCTGAGAGTGAGTGGTTTCTGTaGGCTGAGTGTGGGGGATTCCATGCTGTTGCAGCAGACTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LWGAADPGAESEWFL*AECGGFHAVAADSS Trigger: TGACGAGTCTGCTGCAACAGCATGGAATCCCCCACACTCAGCCCACAGAAACCACTCACTCTCAGCACCTGGGTCAGCAGCTCCCCATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS GCA 90 bp | ATCAGTTCGTCTGCCAGGTCCTGTTCCACCTGGTCCCAGCGCTGCTaGAGGGCCTCTGACAGAGTTGGATACACTAACAAAGAGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ISSSARSCSTWSQRC*RASDRVGYTNKEWG Trigger: TCCCCACTCTTTGTTAGTGTATCCAACTCTGTCAGAGGCCCTGCAGCAGCGCTGGGACCAGGTGGAACAGGACCTGGCAGACGAACTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS GCA 90 bp | GTGATCAGTTCGTCTGCCAGGTCCTGTTCCACCTGGTCCCAGCGCTaGTGCAGGGCCTCTGACAGAGTTGGATACACTAACAAAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VISSSARSCSTWSQR*CRASDRVGYTNKEW Trigger: CCACTCTTTGTTAGTGTATCCAACTCTGTCAGAGGCCCTGCAGCAGCGCTGGGACCAGGTGGAACAGGACCTGGCAGACGAACTGATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | TCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTGGGCTGAAGGCGGCTaGCCTGGGGCAAGAACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLFCLDLWAQQRLASRSLWAEGG*PGARTG Trigger: ACCCGTTCTTGCCCCAGGCAAGCCGCCTTCAGCCCA...GAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | AAGCCGTGTCTACACCACACCAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGTGGGCTGAAGGCGGCTaGCCTGGGGCAAGAACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KPCLHHTSFVHSVKGHSKWAEGG*PGARTG Trigger: ACCCGTTCTTGCCCCAGGCAAGCCGCCTTCAGCCCA...CTTTGAGTGTCCTTTCACAGAGTGAACAAAACTGGTGTGGTGTAGACACGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CCA 90 bp | GCAAACAAGAGGGGTCTCGAATGTCAATGCATAGACACAGGTGCTTaGCTCAGACACGTGGGCCAGTCGGTTGATCTTTCCACAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ANKRGLECQCIDTGA*LRHVGQSVDLSTGE Trigger: CTCACCTGTGGAAAGATCAACCGACTGGCCCACGTGTCTGAGCCAAGCACCTGTGTCTATGCATTGACATTCGAGACCCCTCTTGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | GGATGCGCATGTGGATTAACTTATGGAAGCCTTTGTGTTCATTTGTTCTCAGAAGAGAGCCTGAGTGGCTaGCTCTGCCGGCTCCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCACGLTYGSLCVHLFSEESLSG*LCRLRE Trigger: CTCCCGGAGCCGGCAGAGCAAGCCACTCAGGCTCTC...TTCTGAGAACAAATGAACACAAAGGCTTCCATAAGTTAATCCACATGCGCATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTCCAGGTGAGCTCCACCTaGCTCTGCCGGCTCCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SFVHSVKGHSKLRIFLFFQVSST*LCRLRE Trigger: CTCCCGGAGCCGGCAGAGCAAGGTGGAGCTCACCTG...GAAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038973.7 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTTTGTGCCTTTCTACAGTaGTCCAGAGTCTCAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FILSGSLGTTKAGQQVPLCAFLQ*SRVSSP Trigger: GGGGCTTGAGACTCTGGACAACTGTAGAAAGGCACA...AAGAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCTTACTAGGCTAAAGCACTaGCCAGCAAGTCTGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FILSGSLGTTKAGQQVPLTRLKH*PASLKR Trigger: TCTCTTCAGACTTGCTGGCAAGTGCTTTAGCCTAGT...AAGAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | TCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTCCCTCCCCTTGAAGGTATTGTaGATGATTTCCCACTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SLFCLDLWAQQRLASRSLPLKVL*MISHSC Trigger: GCATGAGTGGGAAATCATCAACAATACCTTCAAGGG...GAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | AACAAAGGCTGGCCAGCAGGTCCCTCTTGTTTGTCAGTGACACTGTCTGATCTACCCTTGAAGGTATTGTaGATGATTTCCCACTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: NKGWPAGPSCLSVTLSDLPLKVL*MISHSC Trigger: GCATGAGTGGGAAATCATCAACAATACCTTCAAGGG...TAGATCAGACAGTGTCACTGACAAACAAGAGGGACCTGCTGGCCAGCCTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | CACAACAAAGGCTGGCCAGCAGGTCCCTCTTGTTTGTCAGTGACACTGTCTGATATGCCCTTGAAGGTATaGTTGATGATTTCCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: HNKGWPAGPSCLSVTLSDMPLKV*LMISHS Trigger: TGAGTGGGAAATCATCAACAATACCTTCAAGGGCAT...ATCAGACAGTGTCACTGACAAACAAGAGGGACCTGCTGGCCAGCCTTTGTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | TGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTCGTGGCGGGCCTCTGACAGAGTaGGATACACTAACAAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CSLCERTLKAQDISILRGGPLTE*DTLTKS Trigger: ACTCTTTGTTAGTGTATCCAACTCTGTCAGAGGCCC...GCCACGAAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | TTGAATCTTTATTTTGTCTGGATCTTTGGGCACAACAAAGGCTGGCCAGCAGGTATGCCCTTGAAGGTATaGTTGATGATTTCCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: LNLYFVWIFGHNKGWPAGMPLKV*LMISHS Trigger: TGAGTGGGAAATCATCAACAATACCTTCAAGGGCAT...ACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAGATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | CAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTTGTGCCTTTCTACAGTaGTCCAGAGTCTCAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QFCSLCERTLKAQDISILCAFLQ*SRVSSP Trigger: GGGGCTTGAGACTCTGGACAACTGTAGAAAGGCACA...AAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | ATCATTTTAAAGGAAATGGATCTTCAACATTCCACAGCTAGCCCACTACTTAATGGGCCTCTGACAGAGTaGGATACACTAACAAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IILKEMDLQHSTASPLLNGPLTE*DTLTKS Trigger: ACTCTTTGTTAGTGTATCCAACTCTGTCAGAGGCCC...ATTAAGTAGTGGGCTAGCTGTGGAATGTTGAAGATCCATTTCCTTTAAAATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTCGTCATCCACATGCCCTaGAAGGTATTGTTGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: SFVHSVKGHSKLRIFLFFVIHMP*KVLLMI Trigger: AATCATCAACAATACCTTCAAGGGCATGTGGATGAC...GAAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS-3UTR CAA 90 bp | CAGTTTTGTTCACTCTGTGAAAGGACACTCAAAGCTCAGGATATTTCTATTCTTGTCATCCACATGCCCTaGAAGGTATTGTTGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: QFCSLCERTLKAQDISILVIHMP*KVLLMI Trigger: AATCATCAACAATACCTTCAAGGGCATGTGGATGAC...AAGAATAGAAATATCCTGAGCTTTGAGTGTCCTTTCACAGAGTGAACAAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CCA 72 bp | GATGCAGGGGCCCGGATACAGCTGAAGGCTCTCTCTTaGGCTGAAGGCGGCTTGCCTGGGGCAAGAACGGGT | + |
|
Preference number: 6 (lower is better) Translates to: DAGARIQLKALS*AEGGLPGARTG Trigger: ACCCGTTCTTGCCCCAGGCAAGCCGCCTTCAGCCCAAGAGAGAGCCTTCAGCTGTATCCGGGCCCCTGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CCA 72 bp | CAGGTGAGCTCCACCTTGCTCTGCCGGCTCCGGGAGTaGCAGGAGTCCCCATCAGTCATCCACATGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QVSSTLLCRLRE*QESPSVIHMPL Trigger: CAAGGGCATGTGGATGACTGATGGGGACTCCTGCCACTCCCGGAGCCGGCAGAGCAAGGTGGAGCTCACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038973.7 |
||
| CDS CCA 72 bp | GAGAGCCTGAGTGGCTTGCTCTGCCGGCTCCGGGAGTaGCAGGAGTCCCCATCAGTCATCCACATGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ESLSGLLCRLRE*QESPSVIHMPL Trigger: CAAGGGCATGTGGATGACTGATGGGGACTCCTGCCACTCCCGGAGCCGGCAGAGCAAGCCACTCAGGCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS CCA 72 bp | TCCACAGGTGAGCTCCACCTGAGAAGAGAGCCTGAGTaGCTTGCTCTGCCGGCTCCGGGAGTGGCAGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: STGELHLRREPE*LALPAPGVAGV Trigger: GACTCCTGCCACTCCCGGAGCCGGCAGAGCAAGCCACTCAGGCTCTCTTCTCAGGTGGAGCTCACCTGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115154.11 |
||
| CDS CAA 90 bp | GACACGTGGGCCAGTCGGTTGATCTTTCCACAGGTGAGCTCCACCTaGCTCTGCCGGCTCCGGGAGTGGCAGGAGTCCCCATCAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: DTWASRLIFPQVSST*LCRLREWQESPSVI Trigger: GATGACTGATGGGGACTCCTGCCACTCCCGGAGCCGGCAGAGCAAGGTGGAGCTCACCTGTGGAAAGATCAACCGACTGGCCCACGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038973.7 |
||
| CDS TCA 72 bp | AGGGGCCCGGATACAGCTGAAGGCTCTCTCTTGGGCTaGAGGCGGCTTGCCTGGGGCAAGAACGGGTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: RGPDTAEGSLLG*RRLAWGKNGLF Trigger: GAATAACCCGTTCTTGCCCCAGGCAAGCCGCCTTCAGCCCAAGAGAGAGCCTTCAGCTGTATCCGGGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CCA 72 bp | GGTCACTCCGCAGATGCTCTGCTGCGATTGCACCTATaGGGAGCTGCTGACCCAGGTGCTGAGAGTGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GHSADALLRLHL*GAADPGAESEW Trigger: CCACTCACTCTCAGCACCTGGGTCAGCAGCTCCCCATAGGTGCAATCGCAGCAGAGCATCTGCGGAGTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS TCA 72 bp | AGCAAGTCTGAAGAGATGCAGGGGCCCGGATACAGCTaGAGGCTCTCTCTTGGGCTGAAGGCGGCTTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SKSEEMQGPGYS*RLSLGLKAACL Trigger: CAGGCAAGCCGCCTTCAGCCCAAGAGAGAGCCTTCAGCTGTATCCGGGCCCCTGCATCTCTTCAGACTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS GCA 72 bp | TCGTCTGCCAGGTCCTGTTCCACCTGGTCCCAGCGCTaGTGCAGGGCCTCTGACAGAGTTGGATACACTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSARSCSTWSQR*CRASDRVGYTN Trigger: GTTAGTGTATCCAACTCTGTCAGAGGCCCTGCAGCAGCGCTGGGACCAGGTGGAACAGGACCTGGCAGACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS GCA 72 bp | CAACTTCTCATAGCCCTGTGGTGTGATCAGTTCGTCTaGCAGGTCCTGTTCCACCTGGTCCCAGCGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLIALWCDQFV*QVLFHLVPALL Trigger: CAGCAGCGCTGGGACCAGGTGGAACAGGACCTGGCAGACGAACTGATCACACCACAGGGCTATGAGAAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CCA 72 bp | GCTGCTGACCCAGGTGCTGAGAGTGAGTGGTTTCTGTaGGCTGAGTGTGGGGGATTCCATGCTGTTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AADPGAESEWFL*AECGGFHAVAA Trigger: TGCTGCAACAGCATGGAATCCCCCACACTCAGCCCACAGAAACCACTCACTCTCAGCACCTGGGTCAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 72 bp | ACACAGGTGCTTGGCTCAGACACGTGGGCCAGTCGGTaGATCTTTCCACAGGTGAGCTCCACCTTGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TQVLGSDTWASR*IFPQVSSTLLC Trigger: GCAGAGCAAGGTGGAGCTCACCTGTGGAAAGATCAACCGACTGGCCCACGTGTCTGAGCCAAGCACCTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038973.7 |
||
| CDS CAA 90 bp | CCTGTTCCACCTGGTCCCAGCGCTGCTGCAGGGCCTCTGACAGAGTaGGATACACTAACAAAGAGTGGGGATGGCAAACAAGAGGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PVPPGPSAAAGPLTE*DTLTKSGDGKQEGS Trigger: AGACCCCTCTTGTTTGCCATCCCCACTCTTTGTTAGTGTATCCAACTCTGTCAGAGGCCCTGCAGCAGCGCTGGGACCAGGTGGAACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS GCA 72 bp | TCTGCCAGGTCCTGTTCCACCTGGTCCCAGCGCTGCTaGAGGGCCTCTGACAGAGTTGGATACACTAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: SARSCSTWSQRC*RASDRVGYTNK Trigger: TTTGTTAGTGTATCCAACTCTGTCAGAGGCCCTGCAGCAGCGCTGGGACCAGGTGGAACAGGACCTGGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 72 bp | ATACAGCTGAAGGCTCTCTCTTGGGCTGAAGGCGGCTaGCCTGGGGCAAGAACGGGTTATTCAGCCCGAATG | + |
|
Preference number: 6 (lower is better) Translates to: IQLKALSWAEGG*PGARTGYSARM Trigger: CATTCGGGCTGAATAACCCGTTCTTGCCCCAGGCAAGCCGCCTTCAGCCCAAGAGAGAGCCTTCAGCTGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 90 bp | CGGCTCCGGGAGTGGCAGGAGTCCCCATCAGTCATCCACATGCCCTaGAAGGTATTGTTGATGATTTCCCACTCATGCCAGATGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLREWQESPSVIHMP*KVLLMISHSCQMPR Trigger: CCTTGGCATCTGGCATGAGTGGGAAATCATCAACAATACCTTCAAGGGCATGTGGATGACTGATGGGGACTCCTGCCACTCCCGGAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 90 bp | AGTCTTTGTACCTCCTGTGACAGCTCTGCATGTGCCTTTCTACAGTaGTCCAGAGTCTCAAGCCCCAGGCCCTTGGAACCTCCTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLCTSCDSSACAFLQ*SRVSSPRPLEPPAS Trigger: GCTGGCAGGAGGTTCCAAGGGCCTGGGGCTTGAGACTCTGGACAACTGTAGAAAGGCACATGCAGAGCTGTCACAGGAGGTACAAAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS GCA 72 bp | GTGGGGATGGCAAACAAGAGGGGTCTCGAATGTCAATaGATAGACACAGGTGCTTGGCTCAGACACGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGMANKRGLECQ*IDTGAWLRHVG Trigger: GCCCACGTGTCTGAGCCAAGCACCTGTGTCTATGCATTGACATTCGAGACCCCTCTTGTTTGCCATCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 72 bp | CCTGGTCCCAGCGCTGCTGCAGGGCCTCTGACAGAGTaGGATACACTAACAAAGAGTGGGGATGGCAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: PGPSAAAGPLTE*DTLTKSGDGKQ Trigger: TTGTTTGCCATCCCCACTCTTTGTTAGTGTATCCAACTCTGTCAGAGGCCCTGCAGCAGCGCTGGGACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 72 bp | ACCTCCTGTGACAGCTCTGCATGTGCCTTTCTACAGTaGTCCAGAGTCTCAAGCCCCAGGCCCTTGGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: TSCDSSACAFLQ*SRVSSPRPLEP Trigger: AGGTTCCAAGGGCCTGGGGCTTGAGACTCTGGACAACTGTAGAAAGGCACATGCAGAGCTGTCACAGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS GCA 72 bp | ACTAGGCTAAAGCACTTGCCAGCAAGTCTGAAGAGATaGAGGGGCCCGGATACAGCTGAAGGCTCTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TRLKHLPASLKR*RGPDTAEGSLL Trigger: CAAGAGAGAGCCTTCAGCTGTATCCGGGCCCCTGCATCTCTTCAGACTTGCTGGCAAGTGCTTTAGCCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CCA 72 bp | TTCCAGCGGAAGGTCTGCTCGTGCTGGGTGACGTTGTaGAAAGGGCAGAATTCATACTTGTACGTGGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: FQRKVCSCWVTL*KGQNSYLYVDS Trigger: GGAGTCCACGTACAAGTATGAATTCTGCCCTTTCCACAACGTCACCCAGCACGAGCAGACCTTCCGCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CCA 72 bp | AGGGGTCTCGAATGTCAATGCATAGACACAGGTGCTTaGCTCAGACACGTGGGCCAGTCGGTTGATCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGLECQCIDTGA*LRHVGQSVDLS Trigger: GGAAAGATCAACCGACTGGCCCACGTGTCTGAGCCAAGCACCTGTGTCTATGCATTGACATTCGAGACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 90 bp | GAGTGGCAGGAGTCCCCATCAGTCATCCACATGCCCTTGAAGGTATaGTTGATGATTTCCCACTCATGCCAGATGCCAAGGATCCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EWQESPSVIHMPLKV*LMISHSCQMPRIPL Trigger: CAGCGGGATCCTTGGCATCTGGCATGAGTGGGAAATCATCAACAATACCTTCAAGGGCATGTGGATGACTGATGGGGACTCCTGCCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 72 bp | TCATACTTGTACGTGGACTCCACTAGGCTAAAGCACTaGCCAGCAAGTCTGAAGAGATGCAGGGGCCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SYLYVDSTRLKH*PASLKRCRGPD Trigger: ATCCGGGCCCCTGCATCTCTTCAGACTTGCTGGCAAGTGCTTTAGCCTAGTGGAGTCCACGTACAAGTATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 90 bp | GGGCAGAATTCATACTTGTACGTGGACTCCACTAGGCTAAAGCACTaGCCAGCAAGTCTGAAGAGATGCAGGGGCCCGGATACAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GQNSYLYVDSTRLKH*PASLKRCRGPDTAE Trigger: TTCAGCTGTATCCGGGCCCCTGCATCTCTTCAGACTTGCTGGCAAGTGCTTTAGCCTAGTGGAGTCCACGTACAAGTATGAATTCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 72 bp | GAGTGGCAGGAGTCCCCATCAGTCATCCACATGCCCTaGAAGGTATTGTTGATGATTTCCCACTCATGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EWQESPSVIHMP*KVLLMISHSCQ Trigger: CTGGCATGAGTGGGAAATCATCAACAATACCTTCAAGGGCATGTGGATGACTGATGGGGACTCCTGCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CAA 72 bp | GAGTCCCCATCAGTCATCCACATGCCCTTGAAGGTATaGTTGATGATTTCCCACTCATGCCAGATGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ESPSVIHMPLKV*LMISHSCQMPR Trigger: CCTTGGCATCTGGCATGAGTGGGAAATCATCAACAATACCTTCAAGGGCATGTGGATGACTGATGGGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||
| CDS CCA 72 bp | AGGGCCTCTGACAGAGTTGGATACACTAACAAAGAGTaGGGATGGCAAACAAGAGGGGTCTCGAATGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RASDRVGYTNKE*GWQTRGVSNVN Trigger: ATTGACATTCGAGACCCCTCTTGTTTGCCATCCCCACTCTTTGTTAGTGTATCCAACTCTGTCAGAGGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038973.7 ENSMUST00000115154.11 |
||