Pregenerated sensors for GNPTAB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035311Ensembl transcript IDs: ENSMUST00000020251.10, ENSMUST00000127615.8, ENSMUST00000130301.8, ENSMUST00000151273.8
Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCAGCGTGGAAAGATGGATAAAGGGTTGGCAGATCCTTCAGGGTaGAGTTGGCTGGCAGGGGCGGGTCCAGAACAAGCATGGGCACCT | + |
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Preference number: 1 (lower is better) Translates to: WQRGKMDKGLADPSG*SWLAGAGPEQAWAP Trigger: AGGTGCCCATGCTTGTTCTGGACCCGCCCCTGCCAGCCAACTGCACCCTGAAGGATCTGCCAACCCTTTATCCATCTTTCCACGCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | GTCGGTTCGGTTGTGTTCTTCCCGAGGGTTTCCCGCATGGCTCTCTaGTCTTCCTCCATGTGCTCTCGGACCTGCTGTAGCTCCTTTAGC | + |
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Preference number: 1 (lower is better) Translates to: VGSVVFFPRVSRMAL*SSSMCSRTCCSSFS Trigger: GCTAAAGGAGCTACAGCAGGTCCGAGAGCACATGGAGGAAGAGCAGAGAGCCATGCGGGAAACCCTCGGGAAGAACACAACCGAACCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | GCCAATCTTGCATTGGTCTCCAACACCGGGGGTGGATTCAAAGCGTaGTCACGGCCTTTCACGGTCACTGTCTCTGCTGGGGCAGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: ANLALVSNTGGGFKA*SRPFTVTVSAGAVH Trigger: ATGGACTGCCCCAGCAGAGACAGTGACCGTGAAAGGCCGTGACCACGCTTTGAATCCACCCCCGGTGTTGGAGACCAATGCAAGATTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | GCTGGCAGGGGCGGGTCCAGAACAAGCATGGGCACCTTAATGCAGTaGGTCAGCAGACATTCCAGCTGCTTCTCACTCTTCTTTGTCGGT | + |
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Preference number: 1 (lower is better) Translates to: AGRGGSRTSMGTLMQ*VSRHSSCFSLFFVG Trigger: ACCGACAAAGAAGAGTGAGAAGCAGCTGGAATGTCTGCTGACGCACTGCATTAAGGTGCCCATGCTTGTTCTGGACCCGCCCCTGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | AACATTGAACATGTCGCTGGCAGCGTGGAAAGATGGATAAAGGGTTaGCAGATCCTTCAGGGTGCAGTTGGCTGGCAGGGGCGGGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: NIEHVAGSVERWIKG*QILQGAVGWQGRVQ Trigger: CTGGACCCGCCCCTGCCAGCCAACTGCACCCTGAAGGATCTGCCAACCCTTTATCCATCTTTCCACGCTGCCAGCGACATGTTCAATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | GAAAGATGGATAAAGGGTTGGCAGATCCTTCAGGGTGCAGTTGGCTaGCAGGGGCGGGTCCAGAACAAGCATGGGCACCTTAATGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: ERWIKGWQILQGAVG*QGRVQNKHGHLNAV Trigger: CACTGCATTAAGGTGCCCATGCTTGTTCTGGACCCGCCCCTGCCAGCCAACTGCACCCTGAAGGATCTGCCAACCCTTTATCCATCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | CCACAGTCACCAGCATCAAACCCGCAGGATAAGACGTTACAGGCTTaGTCACAGAACTTGTCAGCCAGCCAGGAGTTTGCACATCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: PQSPASNPQDKTLQA*SQNLSASQEFAHPW Trigger: CCAAGGATGTGCAAACTCCTGGCTGGCTGACAAGTTCTGTGACCAAGCCTGTAACGTCTTATCCTGCGGGTTTGATGCTGGTGACTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | AGCGGTGAAAGGTTCTCTTTGGACACAGTCACGCCTAGTGTAGGCTaGGCCAATCTTGCATTGGTCTCCAACACCGGGGGTGGATTCAAA | + |
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Preference number: 1 (lower is better) Translates to: SGERFSLDTVTPSVG*ANLALVSNTGGGFK Trigger: TTTGAATCCACCCCCGGTGTTGGAGACCAATGCAAGATTGGCCCAGCCTACACTAGGCGTGACTGTGTCCAAAGAGAACCTTTCACCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR TCA 90 bp | TCAGGTGTATGGTTTTCCACTTGTTTGCAATGGACGCGTGGCGGATaGTGGGGTTGTCGCTGTAGGTCCCTTCAACTCCTCTTCTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: SGVWFSTCLQWTRGG*WGCRCRSLQLLFWL Trigger: TAGCCAGAAGAGGAGTTGAAGGGACCTACAGCGACAACCCCATCATCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | ACAAGCATGGGCACCTTAATGCAGTGCGTCAGCAGACATTCCAGCTaGTTCTCACTCTTCTTTGTCGGTTCGGTTGTGTTCTTCCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: TSMGTLMQCVSRHSS*FSLFFVGSVVFFPR Trigger: CCTCGGGAAGAACACAACCGAACCGACAAAGAAGAGTGAGAAGCAGCTGGAATGTCTGCTGACGCACTGCATTAAGGTGCCCATGCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | GTTCATCCCACTGTGCATTATCAGGTGTATGGTTTTCCACTTGTTTaGAATGGACGCGTGGCGGATGATGGGGTTGTCGCTGTAGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: VHPTVHYQVYGFPLV*NGRVADDGVVAVGP Trigger: GGGACCTACAGCGACAACCCCATCATCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATGCACAGTGGGATGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | GGATGGAATCTGCCCGTTGGTGACAATGAAAATATTCCGTACCCATaGCGCGTGTCTCTCGATAGATCGCAGCGAGTACCTCAGCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: GWNLPVGDNENIPYP*RVSLDRSQRVPQLF Trigger: GAAGAGCTGAGGTACTCGCTGCGATCTATCGAGAGACACGCGCCATGGGTACGGAATATTTTCATTGTCACCAACGGGCAGATTCCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR TCA 90 bp | AGGAAAGCTTTTCTGGCAGCTTTGTCTTCAGTTGACTCGTCTCCTTaGAGGTCGGTGGGAATCCACTCAGGAACGCCAAGCCTTGCATCA | + |
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Preference number: 1 (lower is better) Translates to: RKAFLAALSSVDSSP*RSVGIHSGTPSLAS Trigger: TGATGCAAGGCTTGGCGTTCCTGAGTGGATTCCCACCGACCTTCAAGGAGACGAGTCAACTGAAGACAAAGCTGCCAGAAAAGCTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | TTGTATGTACATTTCCACGACATAATTACATCCGGTGAGCAGCACTaGTACGTGACACTAGCCCTTCGCAATCAGGCCCGCACACGAGGT | + |
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Preference number: 1 (lower is better) Translates to: LYVHFHDIITSGEQH*YVTLALRNQARTRG Trigger: ACCTCGTGTGCGGGCCTGATTGCGAAGGGCTAGTGTCACGTAGCAGTGCTGCTCACCGGATGTAATTATGTCGTGGAAATGTACATACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | ACTATGGTCACTCGAGGGTTGTCAAGGTTCAGCCAGGATGGAATCTaGCCGTTGGTGACAATGAAAATATTCCGTACCCATGGCGCGTGT | + |
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Preference number: 1 (lower is better) Translates to: TMVTRGLSRFSQDGI*PLVTMKIFRTHGAC Trigger: ACACGCGCCATGGGTACGGAATATTTTCATTGTCACCAACGGGCAGATTCCATCCTGGCTGAACCTTGACAACCCTCGAGTGACCATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | TTCAGCTTGTCTCGATATGCCCGCCATTCTTGGAGCTCATGCATGTaGAGAAAGCGGTTCCGATACTCTCTTGGCAGCTCAAACTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: FSLSRYARHSWSSCM*RKRFRYSLGSSNWE Trigger: TTCCCAGTTTGAGCTGCCAAGAGAGTATCGGAACCGCTTTCTGCACATGCATGAGCTCCAAGAATGGCGGGCATATCGAGACAAGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | CCGCACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTaGGGGAAGAAACCAGCAGCTTGTCAGGGAGGGTTTGTCAACAAG | + |
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Preference number: 1 (lower is better) Translates to: PHLLSRWTGFSVCSN*GKKPAACQGGFVNK Trigger: CTTGTTGACAAACCCTCCCTGACAAGCTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | TTTTGGTTTCGCAACATTGAACATGTCGCTGGCAGCGTGGAAAGATaGATAAAGGGTTGGCAGATCCTTCAGGGTGCAGTTGGCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: FWFRNIEHVAGSVER*IKGWQILQGAVGWQ Trigger: CTGCCAGCCAACTGCACCCTGAAGGATCTGCCAACCCTTTATCCATCTTTCCACGCTGCCAGCGACATGTTCAATGTTGCGAAACCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | GTGGGTCACTATGGTCACTCGAGGGTTGTCAAGGTTCAGCCAGGATaGAATCTGCCCGTTGGTGACAATGAAAATATTCCGTACCCATGG | + |
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Preference number: 1 (lower is better) Translates to: VGHYGHSRVVKVQPG*NLPVGDNENIPYPW Trigger: CCATGGGTACGGAATATTTTCATTGTCACCAACGGGCAGATTCCATCCTGGCTGAACCTTGACAACCCTCGAGTGACCATAGTGACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR TCA 90 bp | CCCTGCAGTATTACCAGAGCAGTCTCCGCCATCCCAGTCACAGGCTaGGTTATTACAGGCCTTATCACAATAGCCGTCTTTAATCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: PCSITRAVSAIPVTG*VITGLITIAVFNPG Trigger: TCCTGGATTAAAGACGGCTATTGTGATAAGGCCTGTAATAACTCAGCCTGTGACTGGGATGGCGGAGACTGCTCTGGTAATACTGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATaGAAAGACTGGGGCCCCTCCGCACTTGCTTTCAAGATGGACTGG | + |
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Preference number: 1 (lower is better) Translates to: SKEETSQKLCWKALE*KDWGPSALAFKMDW Trigger: CCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | GGTTGTAGAATTCAGTTTGGGCGCCTCCCTCGTGTCCACCTCTACTaGTATCTGGATCTTGAACTCTTCGTCGTTGGCGTTTTGAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: GCRIQFGRLPRVHLY*YLDLELFVVGVLKS Trigger: ACTCTTCAAAACGCCAACGACGAAGAGTTCAAGATCCAGATAGCAGTAGAGGTGGACACGAGGGAGGCGCCCAAACTGAATTCTACAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | GCTCTCCAAACCATCTGTTTGCTGCCTCCCTTAAACGGTCCAGCATaGGCGTCTTCAACATCCTTAGTAGTGTCAAAAACGACAACGGAG | + |
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Preference number: 1 (lower is better) Translates to: ALQTICLLPPLNGPA*ASSTSLVVSKTTTE Trigger: CTCCGTTGTCGTTTTTGACACTACTAAGGATGTTGAAGACGCCCATGCTGGACCGTTTAAGGGAGGCAGCAAACAGATGGTTTGGAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | GGGGACATCTTCAAAAGGGACGTCAGCCTGAGGAAGAGGTGTCACTaGGCTAACCAAACTTTCATAGGCCTTCTGGGTTGTAGAATTCAG | + |
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Preference number: 1 (lower is better) Translates to: GDIFKRDVSLRKRCH*ANQTFIGLLGCRIQ Trigger: CTGAATTCTACAACCCAGAAGGCCTATGAAAGTTTGGTTAGCCCAGTGACACCTCTTCCTCAGGCTGACGTCCCTTTTGAAGATGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR TCA 90 bp | CTTCGCAATCAGGCCCGCACACGAGGTCACAGTATTCTTGGGGAATaGGTTAAACAAGCTCAAAGCACTTTCAACGTCAATCTCGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: LRNQARTRGHSILGE*VKQAQSTFNVNLEL Trigger: GAGCTCGAGATTGACGTTGAAAGTGCTTTGAGCTTGTTTAACTCATTCCCCAAGAATACTGTGACCTCGTGTGCGGGCCTGATTGCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR TCA 90 bp | GCACTTTTGTTTGTATGTACATTTCCACGACATAATTACATCCGGTaGGCAGCACTGCTACGTGACACTAGCCCTTCGCAATCAGGCCCG | + |
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Preference number: 1 (lower is better) Translates to: ALLFVCTFPRHNYIR*AALLRDTSPSQSGP Trigger: CGGGCCTGATTGCGAAGGGCTAGTGTCACGTAGCAGTGCTGCTCACCGGATGTAATTATGTCGTGGAAATGTACATACAAACAAAAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | CTTATCACAATAGCCGTCTTTAATCCAGGAGCCCGGGCAGCCCTCTaGACAGTTTGGCACAGGCCATGTCAAATAAACCTTTTGACCTTT | + |
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Preference number: 1 (lower is better) Translates to: LITIAVFNPGARAAL*TVWHRPCQINLLTF Trigger: AAAGGTCAAAAGGTTTATTTGACATGGCCTGTGCCAAACTGTGCAGAGGGCTGCCCGGGCTCCTGGATTAAAGACGGCTATTGTGATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | GACGTTACAGGCTTGGTCACAGAACTTGTCAGCCAGCCAGGAGTTTaGACATCCTTGGTTACAGTAAGAGATGGTGTTTATTCCTCCACC | + |
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Preference number: 1 (lower is better) Translates to: DVTGLVTELVSQPGV*TSLVTVRDGVYSST Trigger: GGTGGAGGAATAAACACCATCTCTTACTGTAACCAAGGATGTGCAAACTCCTGGCTGGCTGACAAGTTCTGTGACCAAGCCTGTAACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | CTCCGAGTACAGCCGCAACAGCTTTATTTTAGAGGAAAGCTTTTCTaGCAGCTTTGTCTTCAGTTGACTCGTCTCCTTGAAGGTCGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LRVQPQQLYFRGKLF*QLCLQLTRLLEGRW Trigger: CCACCGACCTTCAAGGAGACGAGTCAACTGAAGACAAAGCTGCCAGAAAAGCTTTCCTCTAAAATAAAGCTGTTGCGGCTGTACTCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | GTTCTAGTTGCAAATCCAAGTTGCTCAGCCTCACCTGGGCCTCTTTaGGAAGGAGTGAAATATTTACCCGGGGGATTTTCACCTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: VLVANPSCSASPGPL*EGVKYLPGGFSPPL Trigger: AAGAGGAGGTGAAAATCCCCCGGGTAAATATTTCACTCCTTCCCAAAGAGGCCCAGGTGAGGCTGAGCAACTTGGATTTGCAACTAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | ATGTCTCCACGTTCTAGTTGCAAATCCAAGTTGCTCAGCCTCACCTaGGCCTCTTTGGGAAGGAGTGAAATATTTACCCGGGGGATTTTC | + |
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Preference number: 1 (lower is better) Translates to: MSPRSSCKSKLLSLT*ASLGRSEIFTRGIF Trigger: GAAAATCCCCCGGGTAAATATTTCACTCCTTCCCAAAGAGGCCCAGGTGAGGCTGAGCAACTTGGATTTGCAACTAGAACGTGGAGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | GGGGTTGTCGCTGTAGGTCCCTTCAACTCCTCTTCTGGCTATGTTTaGAAAGCTGAAATAAGACAGGTATTCACCTTTGGGGACAACATA | + |
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Preference number: 1 (lower is better) Translates to: GVVAVGPFNSSSGYV*KAEIRQVFTFGDNI Trigger: TATGTTGTCCCCAAAGGTGAATACCTGTCTTATTTCAGCTTTGCAAACATAGCCAGAAGAGGAGTTGAAGGGACCTACAGCGACAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | GGGAACATATCTTGGAGTTCTTGCATAACGATCCTGTCAATCATGTaGGGCATGTGTGCAGGGACTTTCCTGGATGTGAATCCAAACTTG | + |
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Preference number: 1 (lower is better) Translates to: GNISWSSCITILSIM*GMCAGTFLDVNPNL Trigger: CAAGTTTGGATTCACATCCAGGAAAGTCCCTGCACACATGCCGCACATGATTGACAGGATCGTTATGCAAGAACTCCAAGATATGTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | TTCCCATCGATGGTCATGTTCTTCTTGGTCTGCTTGTTCAGCTCTTaGAAACCCTTGGGATTATTCAATTTCAGAAGAGCGACACTGGCC | + |
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Preference number: 1 (lower is better) Translates to: FPSMVMFFLVCLFSS*KPLGLFNFRRATLA Trigger: GGCCAGTGTCGCTCTTCTGAAATTGAATAATCCCAAGGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAACATGACCATCGATGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | TTGGGAAGGAGTGAAATATTTACCCGGGGGATTTTCACCTCCTCTTaGAATCTCCCTGTTGCATTTACATCATGTCTCCTGATCTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LGRSEIFTRGIFTSS*NLPVAFTSCLLILG Trigger: CCCCAAGATCAGGAGACATGATGTAAATGCAACAGGGAGATTCCAAGAGGAGGTGAAAATCCCCCGGGTAAATATTTCACTCCTTCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | AACCTGTCAAATCCTGCAAGCTTAAAGGTAGGTCGTGAATTCTCGTaGCCAGTGTTCGGATTTCCCTATCAGACAAGACACCAGATTGGT | + |
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Preference number: 1 (lower is better) Translates to: NLSNPASLKVGREFS*PVFGFPYQTRHQIG Trigger: ACCAATCTGGTGTCTTGTCTGATAGGGAAATCCGAACACTGGCCACGAGAATTCACGACCTACCTTTAAGCTTGCAGGATTTGACAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR TCA 90 bp | CGCTGTAGGTCCCTTCAACTCCTCTTCTGGCTATGTTTGCAAAGCTaGAATAAGACAGGTATTCACCTTTGGGGACAACATAGTGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: RCRSLQLLFWLCLQS*NKTGIHLWGQHSES Trigger: AGACTCACTATGTTGTCCCCAAAGGTGAATACCTGTCTTATTTCAGCTTTGCAAACATAGCCAGAAGAGGAGTTGAAGGGACCTACAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR TCA 90 bp | AAGACCTTAGCAGGGCTGACTTGGACAAGTTATATCCTTTCAGAGTaGTGTCTCCACGTTCTAGTTGCAAATCCAAGTTGCTCAGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: KTLAGLTWTSYILSE*CLHVLVANPSCSAS Trigger: TGAGGCTGAGCAACTTGGATTTGCAACTAGAACGTGGAGACATCACTCTGAAAGGATATAACTTGTCCAAGTCAGCCCTGCTAAGGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR TCA 90 bp | ATGTGTTCCAAACCTGTCAAATCCTGCAAGCTTAAAGGTAGGTCGTaGATTCTCGTGGCCAGTGTTCGGATTTCCCTATCAGACAAGACA | + |
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Preference number: 1 (lower is better) Translates to: MCSKPVKSCKLKGRS*ILVASVRISLSDKT Trigger: TGTCTTGTCTGATAGGGAAATCCGAACACTGGCCACGAGAATTCACGACCTACCTTTAAGCTTGCAGGATTTGACAGGTTTGGAACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | TTGGAGTTCTTGCATAACGATCCTGTCAATCATGTGCGGCATGTGTaGAGGGACTTTCCTGGATGTGAATCCAAACTTGCTGTTGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: LEFLHNDPVNHVRHV*RDFPGCESKLAVEN Trigger: ATTCTCAACAGCAAGTTTGGATTCACATCCAGGAAAGTCCCTGCACACATGCCGCACATGATTGACAGGATCGTTATGCAAGAACTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR TCA 90 bp | GGAGAAGGCAAACTGCATGTCCTCAGAGTGACGCACCTTGTGAAATaGAGTCTTGTCAAATTCTTCAGGGAACATATCTTGGAGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: GEGKLHVLRVTHLVK*SLVKFFREHILEFL Trigger: CAAGAACTCCAAGATATGTTCCCTGAAGAATTTGACAAGACTTCATTTCACAAGGTGCGTCACTCTGAGGACATGCAGTTTGCCTTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | CTGATGGTCAGTTCCTTCCCATCGATGGTCATGTTCTTCTTGGTCTaGTTGTTCAGCTCTTGGAAACCCTTGGGATTATTCAATTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: LMVSSFPSMVMFFLV*LFSSWKPLGLFNFR Trigger: TCTGAAATTGAATAATCCCAAGGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAACATGACCATCGATGGGAAGGAACTGACCATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR GCA 90 bp | ATTTTATTGACGTATCGGAGGGAGTCTGCAAATGTATCTTTTAGTTaGCTCCCGGTATGTTTGCTGTCTGTAAAGTACGCCAACTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: ILLTYRRESANVSFS*LPVCLLSVKYANWV Trigger: GACCCAGTTGGCGTACTTTACAGACAGCAAACATACCGGGAGGCAACTAAAAGATACATTTGCAGACTCCCTCCGATACGTCAATAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | TTTAGTTGCCTCCCGGTATGTTTGCTGTCTGTAAAGTACGCCAACTaGGTCTTCAATGACTCTTCCTCATCAAGAAGGTCTTGGAAATAC | + |
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Preference number: 1 (lower is better) Translates to: FSCLPVCLLSVKYAN*VFNDSSSSRRSWKY Trigger: GTATTTCCAAGACCTTCTTGATGAGGAAGAGTCATTGAAGACCCAGTTGGCGTACTTTACAGACAGCAAACATACCGGGAGGCAACTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CCA 90 bp | GTATTTGTTCTTGTCTTTATAGGCTTTGTGGATCTTGTCAGTTACTaGCTTACAGTTGGTGACAAGACTCTTAGTGACCGGAGGCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: VFVLVFIGFVDLVSY*LTVGDKTLSDRRQV Trigger: AACCTGCCTCCGGTCACTAAGAGTCTTGTCACCAACTGTAAGCCAGTAACTGACAAGATCCACAAAGCCTATAAAGACAAGAACAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR TCA 90 bp | AAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTCTaGAGTGAGGCACTTTTGTTTGTATGTACATTTCCACGACATAAT | + |
|
Preference number: 1 (lower is better) Translates to: KWTPSLAGAISTTHF*SEALLFVCTFPRHN Trigger: ATTATGTCGTGGAAATGTACATACAAACAAAAGTGCCTCACTTCAGAAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR CCA 90 bp | ATAAGACAGGTATTCACCTTTGGGGACAACATAGTGAGTCTGGTTTaGGAGAAGTGTTACTTTATACAATTCATGAAAATGATCTTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: IRQVFTFGDNIVSLV*EKCYFIQFMKMILS Trigger: GGACAAGATCATTTTCATGAATTGTATAAAGTAACACTTCTCCCAAACCAGACTCACTATGTTGTCCCCAAAGGTGAATACCTGTCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCCGGGCAGCCCTCTGCACAGTTTGGCACAGGCCATGTCAAATAAACCTTTTGCCTGCTTGGACTGGCTaGTGGCACTCAGGTCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: ARAALCTVWHRPCQINLLPAWTG*WHSGPT Trigger: TGTGGGACCTGAGTGCCATCAGCCAGTCCAAGCAGG...CAAAAGGTTTATTTGACATGGCCTGTGCCAAACTGTGCAGAGGGCTGCCCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | TCTTCATTATCCTCAAAGCGGCTGGCAGACACGTCCTCATCCTGCTaGGACTGGCTGATGGCACTCAGGTCCCACAGCAGATACGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SSLSSKRLADTSSSC*DWLMALRSHSRYAG Trigger: CCCTGCGTATCTGCTGTGGGACCTGAGTGCCATCAGCCAGTCCAAGCAGGATGAGGACGTGTCTGCCAGCCGCTTTGAGGATAATGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | TCTTTGGACACAGTCACGCCTAGTGTAGGCTGGGCCAATCTTGCATaGGTCTCCAACACCGGGGGTGGATTCAAAGCGTGGTCACGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SLDTVTPSVGWANLA*VSNTGGGFKAWSRP Trigger: AGGCCGTGACCACGCTTTGAATCCACCCCCGGTGTTGGAGACCAATGCAAGATTGGCCCAGCCTACACTAGGCGTGACTGTGTCCAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGCCCTCTGCACAGTTTGGCACAGGCCATGTCAAATAAACCTTTTGACCTTACGAGGCTGCCTCTGTaGCACATCACAGGGACTCCG | + |
|
Preference number: 2 (lower is better) Translates to: GSPLHSLAQAMSNKPFDLTRLPL*HITGTP Trigger: CGGAGTCCCTGTGATGTGGCACAGAGGCAGCCTCGT...AAGGTCAAAAGGTTTATTTGACATGGCCTGTGCCAAACTGTGCAGAGGGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTCTGAAGGCAGATCCTTCAGGGTaGAGTTGGCTGGCAGGGGCG | + |
|
Preference number: 2 (lower is better) Translates to: FQMDTITRWCHQHYSFLKADPSG*SWLAGA Trigger: CGCCCCTGCCAGCCAACTGCACCCTGAAGGATCTGC...CTTCAGAAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | TCAGCAGACATTCCAGCTGCTTCTCACTCTTCTTTGTCGGTTCGGTaGTGTTCTTCCCGAGGGTTTCCCGCATGGCTCTCTGCTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SADIPAASHSSLSVR*CSSRGFPAWLSALP Trigger: AGGAAGAGCAGAGAGCCATGCGGGAAACCCTCGGGAAGAACACAACCGAACCGACAAAGAAGAGTGAGAAGCAGCTGGAATGTCTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | GTCACTCGAGGGTTGTCAAGGTTCAGCCAGGATGGAATCTGCCCGTaGGTGACAATGAAAATATTCCGTACCCATGGCGCGTGTCTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: VTRGLSRFSQDGICP*VTMKIFRTHGACLS Trigger: CGAGAGACACGCGCCATGGGTACGGAATATTTTCATTGTCACCAACGGGCAGATTCCATCCTGGCTGAACCTTGACAACCCTCGAGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCCGGGCAGCCCTCTGCACAGTTTGGCACAGGCCATGTCAAATAAACCTTTTGAAGCAGGGTGGGCATTaGAAGGTATCATGGGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ARAALCTVWHRPCQINLLKQGGH*KVSWVS Trigger: GGAAACCCATGATACCTTCCAATGCCCACCCTGCTT...CAAAAGGTTTATTTGACATGGCCTGTGCCAAACTGTGCAGAGGGCTGCCCGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | CGGAGGGAGTCTGCAAATGTATCTTTTAGTTGCCTCCCGGTATGTTTGCTGTCTCCCGGGGGTCAAGTCTaGCTGAGGCCTGCTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RRESANVSFSCLPVCLLSPGGQV*LRPAAF Trigger: AAAAGCAGCAGGCCTCAGCCAGACTTGACCCCCGGG...AGACAGCAAACATACCGGGAGGCAACTAAAAGATACATTTGCAGACTCCCTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTGCTGTCTGTAAAGTACGCCAACTGGGTCTTCAATGACTCTTCCTCATCACCTTCAGGGTGCAGTTaGCTGGCAGGGGCGGGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: CLLSVKYANWVFNDSSSSPSGCS*LAGAGP Trigger: TGGACCCGCCCCTGCCAGCCAACTGCACCCTGAAGG...TGATGAGGAAGAGTCATTGAAGACCCAGTTGGCGTACTTTACAGACAGCAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAAGCAGAGGCAGGTGAATCTCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGGACACCATCACTCGCTaGTGCCATCAGCACTACTCA | + |
|
Preference number: 2 (lower is better) Translates to: QEAEAGESLSSRPAWSLEDTITR*CHQHYS Trigger: TGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTC...CTCTAAAGACCAGGCTGGCCTTGAACTTAGAGATTCACCTGCCTCTGCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | TTACAGGTACAGCATTGCCTTCTGCCCTGTCACTCTCCTCTTCTTTaGGCAAGTGGCTTTCTGGGGGAACGATCAGCGGTGAAAGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LQVQHCLLPCHSPLL*ASGFLGERSAVKGS Trigger: AGAACCTTTCACCGCTGATCGTTCCCCCAGAAAGCCACTTGCCAAAAGAAGAGGAGAGTGACAGGGCAGAAGGCAATGCTGTACCTGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCACCAGCAAAGCCATGTGGACGTCTGTGAGAAGGGTTTTCCTGTGGGACCTGCCTGGTCTTTAGAGTaGATTACCAAACAGCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VHQQSHVDVCEKGFPVGPAWSLE*ITKQPE Trigger: CTCTGGCTGTTTGGTAATTCACTCTAAAGACCAGGC...AGGTCCCACAGGAAAACCCTTCTCACAGACGTCCACATGGCTTTGCTGGTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | CGTTCTAGTTGCAAATCCAAGTTGCTCAGCCTCACCTGGGCCTCTTaGGGAAGGAGTGAAATATTTACCCGGGGGATTTTCACCTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: RSSCKSKLLSLTWAS*GRSEIFTRGIFTSS Trigger: AGAGGAGGTGAAAATCCCCCGGGTAAATATTTCACTCCTTCCCAAAGAGGCCCAGGTGAGGCTGAGCAACTTGGATTTGCAACTAGAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTCCACCAAACTGCCAGTGCTGTCCAGCTCCAATATTCCCGGTACCCCCACGCAAGGAAGACTATTTaGCAAAGATGGATGTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: FLHQTASAVQLQYSRYPHARKTI*QRWMYL Trigger: GAGATACATCCATCTTTGTCAAATAGTCTTCCTTGC...GTGGGGGTACCGGGAATATTGGAGCTGGACAGCACTGGCAGTTTGGTGGAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGTGAATTACCAAACAGCCAGAGCTGGGCTCTCTTCCCATTaGAGAAGAACCCGGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SKFKASLVFRVNYQTARAGLSSH*RRTRSA Trigger: TGCAGACCGGGTTCTTCTGCAATGGGAAGAGAGCCC...AGCTCTGGCTGTTTGGTAATTCACTCTAAAGACCAGGCTGGCCTTGAACTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTATCAGGTGTATGGTTTTCCACTTGTTTGCAATGGACGCGTGGCGGATGATTTGGAATGCAAAGACTaGGGCCCCTCCGCACTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HYQVYGFPLVCNGRVADDLECKD*GPSALA Trigger: AGCAAGTGCGGAGGGGCCCCAGTCTTTGCATTCCAA...ATCATCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAAGCAGAGGCAGGTGAATCTCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGAGATGGATAAAGGGTTaGCAGATCCTTCAGGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QEAEAGESLSSRPAWSLERWIKG*QILQGA Trigger: TGCACCCTGAAGGATCTGCCAACCCTTTATCCATCT...CTCTAAAGACCAGGCTGGCCTTGAACTTAGAGATTCACCTGCCTCTGCTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTGGGAAGGAGTGAAATATTTACCCGGGGGATTTTCACCTCCTCTTGGAATGGGGTCAAGTCTGGCTaGGGCCTGCTGCTTTTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SLGRSEIFTRGIFTSSWNGVKSG*GLLLLY Trigger: ATACAAAAGCAGCAGGCCTCAGCCAGACTTGACCCC...ATTCCAAGAGGAGGTGAAAATCCCCCGGGTAAATATTTCACTCCTTCCCAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR TCA 90 bp | CGGAGGGAGTCTGCAAATGTATCTTTTAGTTGCCTCCCGGTATGTTTGCTGTCTCTGCTATCTGGATCTTaGACTCTTCGTCGTTGGCGT | + |
|
Preference number: 2 (lower is better) Translates to: RRESANVSFSCLPVCLLSLLSGS*TLRRWR Trigger: ACGCCAACGACGAAGAGTTCAAGATCCAGATAGCAG...AGACAGCAAACATACCGGGAGGCAACTAAAAGATACATTTGCAGACTCCCTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTATCAGGTGTATGGTTTTCCACTTGTTTGCAATGGACGCGTGGCGGATGATGGCACCTTAATGCAGTaGGTCAGCAGACATTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: HYQVYGFPLVCNGRVADDGTLMQ*VSRHSS Trigger: GCTGGAATGTCTGCTGACGCACTGCATTAAGGTGCC...ATCATCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCGTGGCCAGTGTTCGGATTTCCCTATCAGACAAGACACCAGATTGGTCTGTAGCCAGGATGGAATCTaGCCGTTGGTGACAATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SRGQCSDFPIRQDTRLVCSQDGI*PLVTMK Trigger: TTTCATTGTCACCAACGGGCAGATTCCATCCTGGCT...ACAGACCAATCTGGTGTCTTGTCTGATAGGGAAATCCGAACACTGGCCACGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | TCGGTCTGGACTAGCTTCTTTGTGTATCCTCCTCCTGGGAAATATCTTTCGCTTGTGGGACCTCCAGGTTaGCTTTTGTTTCATCGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SVWTSFFVYPPPGKYLSLVGPPG*LLFHRS Trigger: GGACCGATGAAACAAAAGGCAACCTGGAGGTCCCAC...AAGCGAAAGATATTTCCCAGGAGGAGGATACACAAAGAAGCTAGTCCAGACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGGTCTGGACTAGCTTCTTTGTGTATCCTCCTCCTGGGAAATATCTTTCGCTTGACACCATCACTCGCTaGTGCCATCAGCACTACTCA | + |
|
Preference number: 2 (lower is better) Translates to: SVWTSFFVYPPPGKYLSLDTITR*CHQHYS Trigger: TGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTC...AAGCGAAAGATATTTCCCAGGAGGAGGATACACAAAGAAGCTAGTCCAGACCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGCATTATCAGGTGTATGGTTTTCCACTTGTTTGCAATGGACGCGTGGCGGAATATTCCGTACCCATaGCGCGTGTCTCTCGATAGA | + |
|
Preference number: 2 (lower is better) Translates to: LCIIRCMVFHLFAMDAWRNIPYP*RVSLDR Trigger: TCTATCGAGAGACACGCGCCATGGGTACGGAATATT...CCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | CAGCTTTATTTTAGAGGAAAGCTTTTCTGGCAGCTTTGTCTTCAGTaGACTCGTCTCCTTGAAGGTCGGTGGGAATCCACTCAGGAACGC | + |
|
Preference number: 2 (lower is better) Translates to: QLYFRGKLFWQLCLQ*TRLLEGRWESTQER Trigger: GCGTTCCTGAGTGGATTCCCACCGACCTTCAAGGAGACGAGTCAACTGAAGACAAAGCTGCCAGAAAAGCTTTCCTCTAAAATAAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | GCAGGGCTGATGGTCAGTTCCTTCCCATCGATGGTCATGTTCTTCTaGGTCTGCTTGTTCAGCTCTTGGAAACCCTTGGGATTATTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: AGLMVSSFPSMVMFF*VCLFSSWKPLGLFN Trigger: ATTGAATAATCCCAAGGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAACATGACCATCGATGGGAAGGAACTGACCATCAGCCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | AGACGTTACAGGCTTGGTCACAGAACTTGTCAGCCAGCCAGGAGTTaGCACATCCTTGGTTACAGTAAGAGATGGTGTTTATTCCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: RRYRLGHRTCQPARS*HILGYSKRWCLFLH Trigger: GTGGAGGAATAAACACCATCTCTTACTGTAACCAAGGATGTGCAAACTCCTGGCTGGCTGACAAGTTCTGTGACCAAGCCTGTAACGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | CGGAGGGAGTCTGCAAATGTATCTTTTAGTTGCCTCCCGGTATGTTaGCTGTCTGTAAAGTACGCCAACTGGGTCTTCAATGACTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RRESANVSFSCLPVC*LSVKYANWVFNDSS Trigger: GGAAGAGTCATTGAAGACCCAGTTGGCGTACTTTACAGACAGCAAACATACCGGGAGGCAACTAAAAGATACATTTGCAGACTCCCTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCACGAGGCTGCCTCTGTaGCACATCACAGGGACTCCG | + |
|
Preference number: 2 (lower is better) Translates to: RKCVPFWRNTTEIMTEDITRLPL*HITGTP Trigger: CGGAGTCCCTGTGATGTGGCACAGAGGCAGCCTCGT...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACTGCTCTTCCTCCATGTaGTCTCGGACCTGCTGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: SKEETSQKLCWKALECKDCSSSM*SRTCCS Trigger: GCTACAGCAGGTCCGAGAGCACATGGAGGAAGAGCA...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAGGTCGTGAATTCTCGTGGCCAGTGTTCGGATTTCCCTATCAGACAAGACACTCTCCACGTTCTAGTTaGAAATCCAAGTTGCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VGREFSWPVFGFPYQTRHSPRSS*KSKLLS Trigger: GCTGAGCAACTTGGATTTGCAACTAGAACGTGGAGA...GTGTCTTGTCTGATAGGGAAATCCGAACACTGGCCACGAGAATTCACGACCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGATCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAATTGGAATGCAAAGACTaGGGCCCCTCCGCACTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: WIKGGDKPEIMLESFGMQLECKD*GPSALA Trigger: AGCAAGTGCGGAGGGGCCCCAGTCTTTGCATTCCAA...TTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTGCTGTCTGTAAAGTACGCCAACTGGGTCTTCAATGACTCTTCCTCATCAAAGGTTCAGCCAGGATaGAATCTGCCCGTTGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: CLLSVKYANWVFNDSSSSKVQPG*NLPVGD Trigger: GTCACCAACGGGCAGATTCCATCCTGGCTGAACCTT...TGATGAGGAAGAGTCATTGAAGACCCAGTTGGCGTACTTTACAGACAGCAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCGTGGCCAGTGTTCGGATTTCCCTATCAGACAAGACACCAGATTGGTCTGTAAGTGGCTCAGATTTTaGAAAATGTCCTGGTGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SRGQCSDFPIRQDTRLVCKWLRF*KMSWWV Trigger: GACCCACCAGGACATTTTCCAAAATCTGAGCCACTT...ACAGACCAATCTGGTGTCTTGTCTGATAGGGAAATCCGAACACTGGCCACGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | ATGGTCATGTTCTTCTTGGTCTGCTTGTTCAGCTCTTGGAAACCCTaGGGATTATTCAATTTCAGAAGAGCGACACTGGCCTCCGAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: MVMFFLVCLFSSWKP*GLFNFRRATLASEY Trigger: GTACTCGGAGGCCAGTGTCGCTCTTCTGAAATTGAATAATCCCAAGGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAACATGACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | TCTCGTGGCCAGTGTTCGGATTTCCCTATCAGACAAGACACCAGATaGGTCTGTGTCTACTTCATGAAAGACTTGGGAAATATTGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SRGQCSDFPIRQDTR*VCVYFMKDLGNIEG Trigger: CCCCTCAATATTTCCCAAGTCTTTCATGAAGTAGACACAGACCAATCTGGTGTCTTGTCTGATAGGGAAATCCGAACACTGGCCACGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 90 bp | AATATAATCAACGTTGCTAGTACGCAGTGGGTCCAAAACTTCAGCTaGTCTCGATATGCCCGCCATTCTTGGAGCTCATGCATGTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: NIINVASTQWVQNFS*SRYARHSWSSCMCR Trigger: TCTGCACATGCATGAGCTCCAAGAATGGCGGGCATATCGAGACAAGCTGAAGTTTTGGACCCACTGCGTACTAGCAACGTTGATTATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTCTGAAGAGGTTCTTAGTGTGCTaGATAATTCCAGGTCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: FQMDTITRWCHQHYSFLKRFLVC*IIPGQW Trigger: CCACTGACCTGGAATTATTCAGCACACTAAGAACCT...CTTCAGAAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACTGGGGCAGGTTCTTAGTGTGCTaGATAATTCCAGGTCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: EETSQKLCWKALECKDWGRFLVC*IIPGQW Trigger: CCACTGACCTGGAATTATTCAGCACACTAAGAACCT...GCCCCAGTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTCACCAGCAAAGCCATGTGGACGTCTGTGAGAAGGGTTTTCCTGTGGGACCTTCTTCTGGCTATGTTTaGAAAGCTGAAATAAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: VHQQSHVDVCEKGFPVGPSSGYV*KAEIRQ Trigger: CTGTCTTATTTCAGCTTTGCAAACATAGCCAGAAGA...AGGTCCCACAGGAAAACCCTTCTCACAGACGTCCACATGGCTTTGCTGGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGGGTTTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTCACTTGCTTTCAAGATaGACTGGTTTCTCAGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: MGFQMDTITRWCHQHYSFHLLSR*TGFSVC Trigger: GCAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTG...AAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAAACCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTACTGGCTTACAGTTGGTGACAAGACTCTTAGTGACCGGAGGCAGGTTGGGGAGCCAGAAATTATGCTaGAAAGCTTTGGAATGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VTGLQLVTRLLVTGGRLGSQKLC*KALECK Trigger: TTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCT...CCCCAACCTGCCTCCGGTCACTAAGAGTCTTGTCACCAACTGTAAGCCAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGATCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAACCTGGTGGGTCACTATaGTCACTCGAGGGTTGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: WIKGGDKPEIMLESFGMQPGGSL*SLEGCQ Trigger: TTGACAACCCTCGAGTGACCATAGTGACCCACCAGG...TTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTACTGGCTTACAGTTGGTGACAAGACTCTTAGTGACCGGAGGCAGGTTGGGGAAACCTTTTGACCTTTaGAGTGGCTGTAAAAATCGT | + |
|
Preference number: 2 (lower is better) Translates to: VTGLQLVTRLLVTGGRLGKPFDL*SGCKNR Trigger: ACGATTTTTACAGCCACTCCAAAGGTCAAAAGGTTT...CCCCAACCTGCCTCCGGTCACTAAGAGTCTTGTCACCAACTGTAAGCCAGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCGGAGGGAGTCTGCAAATGTATCTTTTAGTTGCCTCCCGGTATGTTTGCTGTAAGACGTTACAGGCTTaGTCACAGAACTTGTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: IGGSLQMYLLVASRYVCCKTLQA*SQNLSA Trigger: GGCTGACAAGTTCTGTGACCAAGCCTGTAACGTCTT...ACAGCAAACATACCGGGAGGCAACTAAAAGATACATTTGCAGACTCCCTCCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CAA 90 bp | CACCTCTACTGCTATCTGGATCTTGAACTCTTCGTCGTTGGCGTTTaGAAGAGTGAGGTTAAAATAGATCGTGGTTGCGTTCATCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: HLYCYLDLELFVVGV*KSEVKIDRGCVHPT Trigger: AGTGGGATGAACGCAACCACGATCTATTTTAACCTCACTCTTCAAAACGCCAACGACGAAGAGTTCAAGATCCAGATAGCAGTAGAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | AATTCTTCAGGGAACATATCTTGGAGTTCTTGCATAACGATCCTGTCAATCATGGGGCTCTCTTCCCATTaGAGAAGAACCCGGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: NSSGNISWSSCITILSIMGLSSH*RRTRSA Trigger: TGCAGACCGGGTTCTTCTGCAATGGGAAGAGAGCCC...CATGATTGACAGGATCGTTATGCAAGAACTCCAAGATATGTTCCCTGAAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTGCTGTCTGTAAAGTACGCCAACTGGGTCTTCAATGACTCTTCCTCATCAAGCCAGCCAGGAGTTTaGACATCCTTGGTTACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: CLLSVKYANWVFNDSSSSSQPGV*TSLVTV Trigger: TACTGTAACCAAGGATGTGCAAACTCCTGGCTGGCT...TGATGAGGAAGAGTCATTGAAGACCCAGTTGGCGTACTTTACAGACAGCAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTTGCTGTCTGTAAAGTACGCCAACTGGGTCTTCAATGACTCTTCCTCATCACGTGTCCACCTCTACTaGTATCTGGATCTTGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: CLLSVKYANWVFNDSSSSRVHLY*YLDLEL Trigger: GAGTTCAAGATCCAGATAGCAGTAGAGGTGGACACG...TGATGAGGAAGAGTCATTGAAGACCCAGTTGGCGTACTTTACAGACAGCAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGCAGAGGCAGGTGAATCTCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGGCTCTTGGAAACCCTTaGGATTATTCAATTTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QEAEAGESLSSRPAWSLEALGNP*DYSISE Trigger: TTCTGAAATTGAATAATCCCAAGGGTTTCCAAGAGC...CTCTAAAGACCAGGCTGGCCTTGAACTTAGAGATTCACCTGCCTCTGCTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCGGTTCCGATACTCTCTTGGCAGCTCAAACTGGGAAGGTATGGGAAACATTGGTCATGTTCTTCTTaGTCTGCTTGTTCAGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: KAVPILSWQLKLGRYGKHWSCSS*SACSAL Trigger: AAGAGCTGAACAAGCAGACCAAGAAGAACATGACCA...ATGTTTCCCATACCTTCCCAGTTTGAGCTGCCAAGAGAGTATCGGAACCGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTCGTGAATTCTCGTGGCCAGTGTTCGGATTTCCCTATCAGACAAGACACCTGAAAGTAGGCAAGTaGCTCAGATTTTGGAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: VGREFSWPVFGFPYQTRHLKVGK*LRFWKM Trigger: CATTTTCCAAAATCTGAGCCACTTGCCTACTTTCAG...GTGTCTTGTCTGATAGGGAAATCCGAACACTGGCCACGAGAATTCACGACCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGCAAACTGCATGTCCTCAGAGTGACGCACCTTGTGAAATGAAGTCTTGTACCTCTACTGCTATCTaGATCTTGAACTCTTCGTCG | + |
|
Preference number: 2 (lower is better) Translates to: RRQTACPQSDAPCEMKSCTSTAI*ILNSSS Trigger: CGACGAAGAGTTCAAGATCCAGATAGCAGTAGAGGT...ACAAGACTTCATTTCACAAGGTGCGTCACTCTGAGGACATGCAGTTTGCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CAA 90 bp | CTGGTGCCATCAGCACTACTCATTTCTGAAGTGAGGCACTTTTGTTaGTATGTACATTTCCACGACATAATTACATCCGGTGAGCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LVPSALLISEVRHFC*YVHFHDIITSGEQH Trigger: GTGCTGCTCACCGGATGTAATTATGTCGTGGAAATGTACATACAAACAAAAGTGCCTCACTTCAGAAATGAGTAGTGCTGATGGCACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR CAA 90 bp | AAACCACCACATAATGACATAACACAGCATGACCAATATCAGGGTTaGCTTACCCACGTCAAAAATGATTCTCCCGTGGGCCAACAATGG | + |
|
Preference number: 2 (lower is better) Translates to: KPPHNDITQHDQYQG*LTHVKNDSPVGQQW Trigger: CCATTGTTGGCCCACGGGAGAATCATTTTTGACGTGGGTAAGCAAACCCTGATATTGGTCATGCTGTGTTATGTCATTATGTGGTGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR CAA 90 bp | GGCATGTGTGCAGGGACTTTCCTGGATGTGAATCCAAACTTGCTGTaGAGAATTTTATTGACGTATCGGAGGGAGTCTGCAAATGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: GMCAGTFLDVNPNLL*RILLTYRRESANVS Trigger: AGATACATTTGCAGACTCCCTCCGATACGTCAATAAAATTCTCAACAGCAAGTTTGGATTCACATCCAGGAAAGTCCCTGCACACATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTTCAGTCTGCAGTAACTaGGGGAAGAAACCAGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: GCISSSLLFFDRSWLTPASVCSN*GKKPAA Trigger: AGCTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGA...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTACTGCTATCTGGATCTTGAACTCTTCGTCGTTGGCGTTTTGAAGAGTGAGAGAGGAAAGCTTTTCTaGCAGCTTTGTCTTCAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LYCYLDLELFVVGVLKSERGKLF*QLCLQL Trigger: CAACTGAAGACAAAGCTGCCAGAAAAGCTTTCCTCT...CTCACTCTTCAAAACGCCAACGACGAAGAGTTCAAGATCCAGATAGCAGTAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTGCTGTCTGTAAAGTACGCCAACTGGGTCTTCAATGACTCTTCCTCATCAGTTCCTTCCCATCGATaGTCATGTTCTTCTTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: CLLSVKYANWVFNDSSSSVPSHR*SCSSWS Trigger: AGACCAAGAAGAACATGACCATCGATGGGAAGGAAC...TGATGAGGAAGAGTCATTGAAGACCCAGTTGGCGTACTTTACAGACAGCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | AAAATAGATCGTGGTTGCGTTCATCCCACTGTGCATTATCAGGTGTATGGTTTTGCCCTCTGCACAGTTTaGCACAGGCCATGTCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: KIDRGCVHPTVHYQVYGFALCTV*HRPCQI Trigger: TATTTGACATGGCCTGTGCCAAACTGTGCAGAGGGC...AAAACCATACACCTGATAATGCACAGTGGGATGAACGCAACCACGATCTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CAA 90 bp | ATGGTCAGTTCCTTCCCATCGATGGTCATGTTCTTCTTGGTCTGCTaGTTCAGCTCTTGGAAACCCTTGGGATTATTCAATTTCAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: MVSSFPSMVMFFLVC*FSSWKPLGLFNFRR Trigger: TCTTCTGAAATTGAATAATCCCAAGGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAACATGACCATCGATGGGAAGGAACTGACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CAA 90 bp | CAAATGAAGATCTTCTACACCCTGATTCGGTCTGGACTAGCTTCTTaGTGTATCCTCCTCCTGGGAAATATCTTTCGCTTCAGAGCAATT | + |
|
Preference number: 2 (lower is better) Translates to: QMKIFYTLIRSGLAS*CILLLGNIFRFRAI Trigger: AATTGCTCTGAAGCGAAAGATATTTCCCAGGAGGAGGATACACAAAGAAGCTAGTCCAGACCGAATCAGGGTGTAGAAGATCTTCATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR TCA 90 bp | AATTCTTCAGGGAACATATCTTGGAGTTCTTGCATAACGATCCTGTCAATCATGCATAATTACATCCGGTaGGCAGCACTGCTACGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: NSSGNISWSSCITILSIMHNYIR*AALLRD Trigger: GTCACGTAGCAGTGCTGCTCACCGGATGTAATTATG...CATGATTGACAGGATCGTTATGCAAGAACTCCAAGATATGTTCCCTGAAGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAATTTTATTGACGTATCGGAGGGAGTCTGCAAATGTATCTTTTAGTTGCGGAAGCAGAGGCAGGTaGATCTCTAAGTTCAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LRILLTYRRESANVSFSCGSRGR*ISKFKA Trigger: GGCCTTGAACTTAGAGATTCACCTGCCTCTGCTTCC...GCAACTAAAAGATACATTTGCAGACTCCCTCCGATACGTCAATAAAATTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACACTGGTTTCTCAGTCTaGAGTAACTGGGGGAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SKEETSQKLCWKALECKDTGFSV*SNWGKK Trigger: TTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGT...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR-3UTR GCA 90 bp | TTGAGAATTTTATTGACGTATCGGAGGGAGTCTGCAAATGTATCTTTTAGTTGCTGGAAAGCTTTGGAATaGAAAGACTGGGGCCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LRILLTYRRESANVSFSCWKALE*KDWGPS Trigger: GGAGGGGCCCCAGTCTTTGCATTCCAAAGCTTTCCA...GCAACTAAAAGATACATTTGCAGACTCCCTCCGATACGTCAATAAAATTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAGGAAGCGTTTCTCTTTaGGGACATCTTCAAAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: WIKGGDKPEIMLESFGMQGSVSL*GHLQKG Trigger: TCCCTTTTGAAGATGTCCCCAAAGAGAAACGCTTCC...TTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CAA 90 bp | GGGACTTTCCTGGATGTGAATCCAAACTTGCTGTTGAGAATTTTATaGACGTATCGGAGGGAGTCTGCAAATGTATCTTTTAGTTGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GTFLDVNPNLLLRIL*TYRRESANVSFSCL Trigger: GAGGCAACTAAAAGATACATTTGCAGACTCCCTCCGATACGTCAATAAAATTCTCAACAGCAAGTTTGGATTCACATCCAGGAAAGTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR TCA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCGCCTGGTCTTTAGAGTaGATTACCAAACAGCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RKCVPFWRNTTEIMTEDIAWSLE*ITKQPE Trigger: CTCTGGCTGTTTGGTAATTCACTCTAAAGACCAGGC...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGCAAACTGCATGTCCTCAGAGTGACGCACCTTGTGAAATGAAGTCTTGTATACTACTGAGATCATaGCTGAAGATATCTTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RRQTACPQSDAPCEMKSCILLRS*LKISSR Trigger: TCTGGAAGATATCTTCAGTCATGATCTCAGTAGTAT...ACAAGACTTCATTTCACAAGGTGCGTCACTCTGAGGACATGCAGTTTGCCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR GCA 90 bp | CATTATCAGGTGTATGGTTTTCCACTTGTTTGCAATGGACGCGTGGCGGATGATCTGCTTTTGTATAGCTaGAAACTAAAGCAGGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: HYQVYGFPLVCNGRVADDLLLYS*KLKQVF Trigger: GAAAACCTGCTTTAGTTTGCAGCTATACAAAAGCAG...ATCATCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAGCAGGGCTGACTTGGACAAGTTATATCCTTTCAGAGTGATGTCTCCACGTGCATTATCAGGTGTATaGTTTTCCACTTGTTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LSRADLDKLYPFRVMSPRALSGV*FSTCLQ Trigger: TTGCAAACAAGTGGAAAACCATACACCTGATAATGC...ACGTGGAGACATCACTCTGAAAGGATATAACTTGTCCAAGTCAGCCCTGCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR TCA 90 bp | TGGATCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGTATTCTTGGGGAATaGGTTAAACAAGCTCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: WIKGGDKPEIMLESFGMQSILGE*VKQAQS Trigger: GCTTTGAGCTTGTTTAACTCATTCCCCAAGAATACT...TTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR-3UTR TCA 90 bp | TGGATCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAGCAAGGAAGACTATTTaGCAAAGATGGATGTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: WIKGGDKPEIMLESFGMQARKTI*QRWMYL Trigger: GAGATACATCCATCTTTGTCAAATAGTCTTCCTTGC...TTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGCAAACTGCATGTCCTCAGAGTGACGCACCTTGTGAAATGAAGTCTTGTATAGTGAGTCTGGTTTaGGAGAAGTGTTACTTTATA | + |
|
Preference number: 2 (lower is better) Translates to: RRQTACPQSDAPCEMKSCIVSLV*EKCYFI Trigger: TATAAAGTAACACTTCTCCCAAACCAGACTCACTAT...ACAAGACTTCATTTCACAAGGTGCGTCACTCTGAGGACATGCAGTTTGCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR TCA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTAGCACTACTCATTTCTaGAGTGAGGCACTTTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: GCISSSLLFFDRSWLTPASTTHF*SEALLF Trigger: AAACAAAAGTGCCTCACTTCAGAAATGAGTAGTGCT...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
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| 3UTR-3UTR CCA 90 bp | AATTCTTCAGGGAACATATCTTGGAGTTCTTGCATAACGATCCTGTCAATCATGTCACCTGGGCCTCTTTaGGAAGGAGTGAAATATTTA | + |
|
Preference number: 2 (lower is better) Translates to: NSSGNISWSSCITILSIMSPGPL*EGVKYL Trigger: TAAATATTTCACTCCTTCCCAAAGAGGCCCAGGTGA...CATGATTGACAGGATCGTTATGCAAGAACTCCAAGATATGTTCCCTGAAGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAATTTTATTGACGTATCGGAGGGAGTCTGCAAATGTATCTTTTAGTTGCTATATCCTTTCAGAGTaGTGTCTCCACGTTCTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LRILLTYRRESANVSFSCYILSE*CLHVLV Trigger: AACTAGAACGTGGAGACATCACTCTGAAAGGATATA...GCAACTAAAAGATACATTTGCAGACTCCCTCCGATACGTCAATAAAATTCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| 3UTR CAA 90 bp | AATAAGACAGGTATTCACCTTTGGGGACAACATAGTGAGTCTGGTTaGGGAGAAGTGTTACTTTATACAATTCATGAAAATGATCTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: NKTGIHLWGQHSESG*GEVLLYTIHENDLV Trigger: GACAAGATCATTTTCATGAATTGTATAAAGTAACACTTCTCCCAAACCAGACTCACTATGTTGTCCCCAAAGGTGAATACCTGTCTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | ACCCGGTCTGCACGATGTCCCTTCTCCCCACGAGGCTaGCTCTGTGCCACATCACAGGGACTCCGCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TRSARCPFSPRG*LCATSQGLRCG Trigger: ACCACAGCGGAGTCCCTGTGATGTGGCACAGAGGCAGCCTCGTGGGGAGAAGGGACATCGTGCAGACCGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | TGCACGATGTCCCTTCTCCCCACGAGGCTGCCTCTGTaGCACATCACAGGGACTCCGCTGTGGTGTCGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CTMSLLPTRLPL*HITGTPLWCRG Trigger: TCCTCGACACCACAGCGGAGTCCCTGTGATGTGGCACAGAGGCAGCCTCGTGGGGAGAAGGGACATCGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGACTGGGGCCCCTCCGCACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGTCCTTCAGGGTGCAGTaGGCTGGCAGGGGCGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KDWGPSALAFKMDWFLSLSFRVQ*AGRGGS Trigger: GGACCCGCCCCTGCCAGCCAACTGCACCCTGAAGGA...CAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | AGGCTGCCTCTGTGCCACATCACAGGGACTCCGCTGTaGTGTCGAGGAGGGAGATGTTCACAGATGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RLPLCHITGTPL*CRGGRCSQMLR Trigger: CCTCAGCATCTGTGAACATCTCCCTCCTCGACACCACAGCGGAGTCCCTGTGATGTGGCACAGAGGCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | GCATTGGTCTCCAACACCGGGGGTGGATTCAAAGCGTaGTCACGGCCTTTCACGGTCACTGTCTCTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALVSNTGGGFKA*SRPFTVTVSAG Trigger: CCCAGCAGAGACAGTGACCGTGAAAGGCCGTGACCACGCTTTGAATCCACCCCCGGTGTTGGAGACCAATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | GTTGTGTTCTTCCCGAGGGTTTCCCGCATGGCTCTCTaGTCTTCCTCCATGTGCTCTCGGACCTGCTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VVFFPRVSRMAL*SSSMCSRTCCS Trigger: GCTACAGCAGGTCCGAGAGCACATGGAGGAAGAGCAGAGAGCCATGCGGGAAACCCTCGGGAAGAACACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | TTATCCTCAAAGCGGCTGGCAGACACGTCCTCATCCTaGTTGGACTGGCTGATGGCACTCAGGTCCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSSKRLADTSSS*LDWLMALRSHS Trigger: GCTGTGGGACCTGAGTGCCATCAGCCAGTCCAAGCAGGATGAGGACGTGTCTGCCAGCCGCTTTGAGGATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | ATAAAGGGTTGGCAGATCCTTCAGGGTGCAGTTGGCTaGCAGGGGCGGGTCCAGAACAAGCATGGGCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: IKGWQILQGAVG*QGRVQNKHGHL Trigger: AAGGTGCCCATGCTTGTTCTGGACCCGCCCCTGCCAGCCAACTGCACCCTGAAGGATCTGCCAACCCTTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | GGAAAGATGGATAAAGGGTTGGCAGATCCTTCAGGGTaGAGTTGGCTGGCAGGGGCGGGTCCAGAACAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GKMDKGLADPSG*SWLAGAGPEQA Trigger: TGCTTGTTCTGGACCCGCCCCTGCCAGCCAACTGCACCCTGAAGGATCTGCCAACCCTTTATCCATCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | CACGGTCACTGTCTCTGCTGGGGCAGTCCATCTCTCTaGTCTGTGTTCACCAGCAAAGCCATGTGGACGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HGHCLCWGSPSL*SVFTSKAMWTS Trigger: AGACGTCCACATGGCTTTGCTGGTGAACACAGATCAGAGAGATGGACTGCCCCAGCAGAGACAGTGACCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | GGCGGGTCCAGAACAAGCATGGGCACCTTAATGCAGTaGGTCAGCAGACATTCCAGCTGCTTCTCACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GGSRTSMGTLMQ*VSRHSSCFSLF Trigger: GAAGAGTGAGAAGCAGCTGGAATGTCTGCTGACGCACTGCATTAAGGTGCCCATGCTTGTTCTGGACCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | CTGTCCAGCTCCAATATTCCCGGTACCCCCACCTCCTaGAACAAACCGGTTCCCTGCAGTATTACCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSSSNIPGTPTS*NKPVPCSITRA Trigger: TGCTCTGGTAATACTGCAGGGAACCGGTTTGTTGCAGGAGGTGGGGGTACCGGGAATATTGGAGCTGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | TGGTTTTCCACTTGTTTGCAATGGACGCGTGGCGGATaGTGGGGTTGTCGCTGTAGGTCCCTTCAACTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: WFSTCLQWTRGG*WGCRCRSLQLL Trigger: GAGGAGTTGAAGGGACCTACAGCGACAACCCCATCATCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | GATCTGTGTTCACCAGCAAAGCCATGTGGACGTCTGTaGGAAGGGTTTTCCTGTGGGACCTCCAGGTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: DLCSPAKPCGRL*EGFSCGTSRLP Trigger: AGGCAACCTGGAGGTCCCACAGGAAAACCCTTCTCACAGACGTCCACATGGCTTTGCTGGTGAACACAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | CATTTCCACGACATAATTACATCCGGTGAGCAGCACTaGTACGTGACACTAGCCCTTCGCAATCAGGCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: HFHDIITSGEQH*YVTLALRNQAR Trigger: GCGGGCCTGATTGCGAAGGGCTAGTGTCACGTAGCAGTGCTGCTCACCGGATGTAATTATGTCGTGGAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | AAGGTCGGTGGGAATCCACTCAGGAACGCCAAGCCTTaGATCAGCACTAAGCCAGGGGCTTCTTTGTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KVGGNPLRNAKP*ISTKPGASLSV Trigger: AACAGACAAAGAAGCCCCTGGCTTAGTGCTGATGCAAGGCTTGGCGTTCCTGAGTGGATTCCCACCGACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CCTTCTGCCCTGTCACTCTCCTCTTCTTTTGGCAAGTaGCTTTCTGGGGGAACGATCAGCGGTGAAAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSALSLSSSFGK*LSGGTISGERF Trigger: GAACCTTTCACCGCTGATCGTTCCCCCAGAAAGCCACTTGCCAAAAGAAGAGGAGAGTGACAGGGCAGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCACCAGCAAAGCCATGTGGACGTCTGTGAGAAGGGTTTTCCTGTGGGACCTTGGTTTTCCACTTGTTaGCAATGGACGCGTGGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: VHQQSHVDVCEKGFPVGPWFSTC*QWTRGG Trigger: TCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCA...AGGTCCCACAGGAAAACCCTTCTCACAGACGTCCACATGGCTTTGCTGGTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | TTTCTGGCAGCTTTGTCTTCAGTTGACTCGTCTCCTTaGAGGTCGGTGGGAATCCACTCAGGAACGCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: FLAALSSVDSSP*RSVGIHSGTPS Trigger: GCTTGGCGTTCCTGAGTGGATTCCCACCGACCTTCAAGGAGACGAGTCAACTGAAGACAAAGCTGCCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | ATAGCCGTCTTTAATCCAGGAGCCCGGGCAGCCCTCTaGACAGTTTGGCACAGGCCATGTCAAATAAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: IAVFNPGARAAL*TVWHRPCQINL Trigger: AAGGTTTATTTGACATGGCCTGTGCCAAACTGTGCAGAGGGCTGCCCGGGCTCCTGGATTAAAGACGGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | ATTCAGTTTGGGCGCCTCCCTCGTGTCCACCTCTACTaGTATCTGGATCTTGAACTCTTCGTCGTTGGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: IQFGRLPRVHLY*YLDLELFVVGV Trigger: AACGCCAACGACGAAGAGTTCAAGATCCAGATAGCAGTAGAGGTGGACACGAGGGAGGCGCCCAAACTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | TCTCGATATGCCCGCCATTCTTGGAGCTCATGCATGTaGAGAAAGCGGTTCCGATACTCTCTTGGCAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRYARHSWSSCM*RKRFRYSLGSS Trigger: TGAGCTGCCAAGAGAGTATCGGAACCGCTTTCTGCACATGCATGAGCTCCAAGAATGGCGGGCATATCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CTTTGTCTTCAGTTGACTCGTCTCCTTGAAGGTCGGTaGGAATCCACTCAGGAACGCCAAGCCTTGCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LCLQLTRLLEGR*ESTQERQALHQ Trigger: CTGATGCAAGGCTTGGCGTTCCTGAGTGGATTCCCACCGACCTTCAAGGAGACGAGTCAACTGAAGACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CTGCCCGTTGGTGACAATGAAAATATTCCGTACCCATaGCGCGTGTCTCTCGATAGATCGCAGCGAGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: LPVGDNENIPYP*RVSLDRSQRVP Trigger: AGGTACTCGCTGCGATCTATCGAGAGACACGCGCCATGGGTACGGAATATTTTCATTGTCACCAACGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CCAGCATCAAACCCGCAGGATAAGACGTTACAGGCTTaGTCACAGAACTTGTCAGCCAGCCAGGAGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PASNPQDKTLQA*SQNLSASQEFA Trigger: TGCAAACTCCTGGCTGGCTGACAAGTTCTGTGACCAAGCCTGTAACGTCTTATCCTGCGGGTTTGATGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCGGGCAGCCCTCTGCACAGTTTGGCACAGGCCATGTCAAATAAACCTTTTGTTCTTCTTGGTCTGCTaGTTCAGCTCTTGGAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: ARAALCTVWHRPCQINLLFFLVC*FSSWKP Trigger: GGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAA...CAAAAGGTTTATTTGACATGGCCTGTGCCAAACTGTGCAGAGGGCTGCCCGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTACTGGCTTACAGTTGGTGACAAGACTCTTAGTGACCGGAGGCAGGTTGGGGGGTGAAAGGTTCTCTTaGGACACAGTCACGCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: VTGLQLVTRLLVTGGRLGGERFS*DTVTPS Trigger: ACTAGGCGTGACTGTGTCCAAAGAGAACCTTTCACC...CCCCAACCTGCCTCCGGTCACTAAGAGTCTTGTCACCAACTGTAAGCCAGTAAC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGGTCTGGACTAGCTTCTTTGTGTATCCTCCTCCTGGGAAATATCTTTCGCTTACGTCCTCATCCTGCTaGGACTGGCTGATGGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: SVWTSFFVYPPPGKYLSLTSSSC*DWLMAL Trigger: GAGTGCCATCAGCCAGTCCAAGCAGGATGAGGACGT...AAGCGAAAGATATTTCCCAGGAGGAGGATACACAAAGAAGCTAGTCCAGACCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | CCGCACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTaGAGTAACTGGGGGAAGAAACCAGCAGCTTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PHLLSRWTGFSV*SNWGKKPAACQ Trigger: CTGACAAGCTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | AGCTTTGGAATGCAAAGACTGGGGCCCCTCCGCACTTaGTTTCAAGATGGACTGGTTTCTCAGTCTGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SFGMQRLGPLRT*FQDGLVSQSAV Trigger: TACTGCAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTTGCATTCCAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | GGCACCTTAATGCAGTGCGTCAGCAGACATTCCAGCTaGTTCTCACTCTTCTTTGTCGGTTCGGTTGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GTLMQCVSRHSS*FSLFFVGSVVF Trigger: GAACACAACCGAACCGACAAAGAAGAGTGAGAAGCAGCTGGAATGTCTGCTGACGCACTGCATTAAGGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | GTCTGCCAGGCACTAACTCCTTTACAGGTACAGCATTaGCTTCTGCCCTGTCACTCTCCTCTTCTTTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VCQALTPLQVQH*LLPCHSPLLLA Trigger: TGCCAAAAGAAGAGGAGAGTGACAGGGCAGAAGGCAATGCTGTACCTGTAAAGGAGTTAGTGCCTGGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CGCAACATTGAACATGTCGCTGGCAGCGTGGAAAGATaGATAAAGGGTTGGCAGATCCTTCAGGGTGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RNIEHVAGSVER*IKGWQILQGAV Trigger: AACTGCACCCTGAAGGATCTGCCAACCCTTTATCCATCTTTCCACGCTGCCAGCGACATGTTCAATGTTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | ACTGTGCATTATCAGGTGTATGGTTTTCCACTTGTTTaGAATGGACGCGTGGCGGATGATGGGGTTGTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: TVHYQVYGFPLV*NGRVADDGVVA Trigger: AGCGACAACCCCATCATCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATGCACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | TACGCAGTGGGTCCAAAACTTCAGCTTGTCTCGATATaGCCGCCATTCTTGGAGCTCATGCATGTGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: YAVGPKLQLVSI*PPFLELMHVQK Trigger: TTTCTGCACATGCATGAGCTCCAAGAATGGCGGGCATATCGAGACAAGCTGAAGTTTTGGACCCACTGCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CTTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTaGGGGAAGAAACCAGCAGCTTGTCAGGGAGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSRWTGFSVCSN*GKKPAACQGGF Trigger: AAACCCTCCCTGACAAGCTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | TGGTTGCGTTCATCCCACTGTGCATTATCAGGTGTATaGTTTTCCACTTGTTTGCAATGGACGCGTGGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: WLRSSHCALSGV*FSTCLQWTRGG Trigger: TCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATGCACAGTGGGATGAACGCAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | TTCAAAAGGGACGTCAGCCTGAGGAAGAGGTGTCACTaGGCTAACCAAACTTTCATAGGCCTTCTGGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: FKRDVSLRKRCH*ANQTFIGLLGC Trigger: ACAACCCAGAAGGCCTATGAAAGTTTGGTTAGCCCAGTGACACCTCTTCCTCAGGCTGACGTCCCTTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | GCAAATCCAAGTTGCTCAGCCTCACCTGGGCCTCTTTaGGAAGGAGTGAAATATTTACCCGGGGGATTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ANPSCSASPGPL*EGVKYLPGGFS Trigger: TGAAAATCCCCCGGGTAAATATTTCACTCCTTCCCAAAGAGGCCCAGGTGAGGCTGAGCAACTTGGATTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CGTTCTAGTTGCAAATCCAAGTTGCTCAGCCTCACCTaGGCCTCTTTGGGAAGGAGTGAAATATTTACCCGG | + |
|
Preference number: 3 (lower is better) Translates to: RSSCKSKLLSLT*ASLGRSEIFTR Trigger: CCGGGTAAATATTTCACTCCTTCCCAAAGAGGCCCAGGTGAGGCTGAGCAACTTGGATTTGCAACTAGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTCTGAAGGAAGAAACCAGCAGCTaGTCAGGGAGGGTTTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FQMDTITRWCHQHYSFLKEETSS*SGRVCQ Trigger: TTGACAAACCCTCCCTGACAAGCTGCTGGTTTCTTC...CTTCAGAAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGCCCTCTGCACAGTTTGGCACAGGCCATGTCAAATAAACCTTTTGACCTTTTATGCTGGAAAGCTTaGGAATGCAAAGACTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSPLHSLAQAMSNKPFDLLCWKA*ECKDWG Trigger: GCCCCAGTCTTTGCATTCCAAAGCTTTCCAGCATAA...AAGGTCAAAAGGTTTATTTGACATGGCCTGTGCCAAACTGTGCAGAGGGCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGCATTATCAGGTGTATGGTTTTCCACTTGTTTGCAATGGACGCGTGGCGGGCTTCTCACTCTTCTTaGTCGGTTCGGTTGTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LCIIRCMVFHLFAMDAWRASHSS*SVRLCS Trigger: AGAACACAACCGAACCGACAAAGAAGAGTGAGAAGC...CCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCACCAGCAAAGCCATGTGGACGTCTGTGAGAAGGGTTTTCCTGTGGGACCTGATGGAATCTGCCCGTaGGTGACAATGAAAATATTC | + |
|
Preference number: 3 (lower is better) Translates to: VHQQSHVDVCEKGFPVGPDGICP*VTMKIF Trigger: GAATATTTTCATTGTCACCAACGGGCAGATTCCATC...AGGTCCCACAGGAAAACCCTTCTCACAGACGTCCACATGGCTTTGCTGGTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | ATTACCAGAGCAGTCTCCGCCATCCCAGTCACAGGCTaGGTTATTACAGGCCTTATCACAATAGCCGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ITRAVSAIPVTG*VITGLITIAVF Trigger: AAAGACGGCTATTGTGATAAGGCCTGTAATAACTCAGCCTGTGACTGGGATGGCGGAGACTGCTCTGGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | ACTCGAGGGTTGTCAAGGTTCAGCCAGGATGGAATCTaGCCGTTGGTGACAATGAAAATATTCCGTACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TRGLSRFSQDGI*PLVTMKIFRTH Trigger: ATGGGTACGGAATATTTTCATTGTCACCAACGGGCAGATTCCATCCTGGCTGAACCTTGACAACCCTCGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | ACCATCTGTTTGCTGCCTCCCTTAAACGGTCCAGCATaGGCGTCTTCAACATCCTTAGTAGTGTCAAAAACG | + |
|
Preference number: 3 (lower is better) Translates to: TICLLPPLNGPA*ASSTSLVVSKT Trigger: CGTTTTTGACACTACTAAGGATGTTGAAGACGCCCATGCTGGACCGTTTAAGGGAGGCAGCAAACAGATGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | TGGTCAGTTCCTTCCCATCGATGGTCATGTTCTTCTTaGTCTGCTTGTTCAGCTCTTGGAAACCCTTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: WSVPSHRWSCSS*SACSALGNPWD Trigger: ATCCCAAGGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAACATGACCATCGATGGGAAGGAACTGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTATCAGGTGTATGGTTTTCCACTTGTTTGCAATGGACGCGTGGCGGATGATAAGATGGATAAAGGGTaGGCAGATCCTTCAGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HYQVYGFPLVCNGRVADDKMDKG*ADPSGC Trigger: GCACCCTGAAGGATCTGCCAACCCTTTATCCATCTT...ATCATCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTGGGAAGGAGTGAAATATTTACCCGGGGGATTTTCACCTCCTCTTGGAATATGGTCACTCGAGGGTaGTCAAGGTTCAGCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SLGRSEIFTRGIFTSSWNMVTRG*SRFSQD Trigger: ATCCTGGCTGAACCTTGACAACCCTCGAGTGACCAT...ATTCCAAGAGGAGGTGAAAATCCCCCGGGTAAATATTTCACTCCTTCCCAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAACGTCAATCTCGAGCTCTTCAGTAGTTGTTAGCGATTCAAGACCACTTGACCTCCAAACCATCTGTTaGCTGCCTCCCTTAAACGGT | + |
|
Preference number: 3 (lower is better) Translates to: STSISSSSVVVSDSRPLDLQTIC*LPPLNG Trigger: ACCGTTTAAGGGAGGCAGCAAACAGATGGTTTGGAG...GTCAAGTGGTCTTGAATCGCTAACAACTACTGAAGAGCTCGAGATTGACGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGAGGGAGTCTGCAAATGTATCTTTTAGTTGCCTCCCGGTATGTTTGCTGTCTGGAGTTTGCACATCCTaGGTTACAGTAAGAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: RRESANVSFSCLPVCLLSGVCTS*VTVRDG Trigger: ACCATCTCTTACTGTAACCAAGGATGTGCAAACTCC...AGACAGCAAACATACCGGGAGGCAACTAAAAGATACATTTGCAGACTCCCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGAGGGAGTCTGCAAATGTATCTTTTAGTTGCCTCCCGGTATGTTTGCTGTCTCTTAGCAGGGCTGACTaGGACAAGTTATATCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RRESANVSFSCLPVCLLSLSRAD*DKLYPF Trigger: GAAAGGATATAACTTGTCCAAGTCAGCCCTGCTAAG...AGACAGCAAACATACCGGGAGGCAACTAAAAGATACATTTGCAGACTCCCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | CAGGCCCGCACACGAGGTCACAGTATTCTTGGGGAATaGGTTAAACAAGCTCAAAGCACTTTCAACGTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: QARTRGHSILGE*VKQAQSTFNVN Trigger: ATTGACGTTGAAAGTGCTTTGAGCTTGTTTAACTCATTCCCCAAGAATACTGTGACCTCGTGTGCGGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | GGCTTGGTCACAGAACTTGTCAGCCAGCCAGGAGTTTaGACATCCTTGGTTACAGTAAGAGATGGTGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GLVTELVSQPGV*TSLVTVRDGVY Trigger: ATAAACACCATCTCTTACTGTAACCAAGGATGTGCAAACTCCTGGCTGGCTGACAAGTTCTGTGACCAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | TTGCATAACGATCCTGTCAATCATGTGCGGCATGTGTaGAGGGACTTTCCTGGATGTGAATCCAAACTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LHNDPVNHVRHV*RDFPGCESKLA Trigger: AGCAAGTTTGGATTCACATCCAGGAAAGTCCCTGCACACATGCCGCACATGATTGACAGGATCGTTATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | TCTTGGAGTTCTTGCATAACGATCCTGTCAATCATGTaGGGCATGTGTGCAGGGACTTTCCTGGATGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SWSSCITILSIM*GMCAGTFLDVN Trigger: ATTCACATCCAGGAAAGTCCCTGCACACATGCCGCACATGATTGACAGGATCGTTATGCAAGAACTCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CTCCCGGTATGTTTGCTGTCTGTAAAGTACGCCAACTaGGTCTTCAATGACTCTTCCTCATCAAGAAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPVCLLSVKYAN*VFNDSSSSRRS Trigger: AGACCTTCTTGATGAGGAAGAGTCATTGAAGACCCAGTTGGCGTACTTTACAGACAGCAAACATACCGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | AATCCTGCAAGCTTAAAGGTAGGTCGTGAATTCTCGTaGCCAGTGTTCGGATTTCCCTATCAGACAAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: NPASLKVGREFS*PVFGFPYQTRH Trigger: GTGTCTTGTCTGATAGGGAAATCCGAACACTGGCCACGAGAATTCACGACCTACCTTTAAGCTTGCAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | AGGACAGCCTTCACTGTCCGGGCATCTTTATGGTTGTaGTCAATGTTGTCATTCAGACAAACGAACTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RTAFTVRASLWL*SMLSFRQTNFL Trigger: CAGGAAGTTCGTTTGTCTGAATGACAACATTGACCACAACCATAAAGATGCCCGGACAGTGAAGGCTGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACGAAGAAACCAGCAGCTaGTCAGGGAGGGTTTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SKEETSQKLCWKALECKDEETSS*SGRVCQ Trigger: TTGACAAACCCTCCCTGACAAGCTGCTGGTTTCTTC...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | TTTGTATGTACATTTCCACGACATAATTACATCCGGTaGGCAGCACTGCTACGTGACACTAGCCCTTCGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FVCTFPRHNYIR*AALLRDTSPSQ Trigger: TTGCGAAGGGCTAGTGTCACGTAGCAGTGCTGCTCACCGGATGTAATTATGTCGTGGAAATGTACATACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | GCAGGGCTGACTTGGACAAGTTATATCCTTTCAGAGTaGTGTCTCCACGTTCTAGTTGCAAATCCAAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: AGLTWTSYILSE*CLHVLVANPSC Trigger: GCAACTTGGATTTGCAACTAGAACGTGGAGACATCACTCTGAAAGGATATAACTTGTCCAAGTCAGCCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | AAACCTGTCAAATCCTGCAAGCTTAAAGGTAGGTCGTaGATTCTCGTGGCCAGTGTTCGGATTTCCCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: KPVKSCKLKGRS*ILVASVRISLS Trigger: TGATAGGGAAATCCGAACACTGGCCACGAGAATTCACGACCTACCTTTAAGCTTGCAGGATTTGACAGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR GCA 72 bp | AGTTCCTTCCCATCGATGGTCATGTTCTTCTTGGTCTaGTTGTTCAGCTCTTGGAAACCCTTGGGATTATTC | + |
|
Preference number: 3 (lower is better) Translates to: SSFPSMVMFFLV*LFSSWKPLGLF Trigger: GAATAATCCCAAGGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAACATGACCATCGATGGGAAGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCGGTTCCGATACTCTCTTGGCAGCTCAAACTGGGAAGGTATGGGAAACATTTCAGGGAACATATCTaGGAGTTCTTGCATAACGAT | + |
|
Preference number: 3 (lower is better) Translates to: KAVPILSWQLKLGRYGKHFREHI*EFLHND Trigger: ATCGTTATGCAAGAACTCCAAGATATGTTCCCTGAA...ATGTTTCCCATACCTTCCCAGTTTGAGCTGCCAAGAGAGTATCGGAACCGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | ACTCGCTGGTGCCATCAGCACTACTCATTTCTGAAGTaGGGCACTTTTGTTTGTATGTACATTTCCACGACA | + |
|
Preference number: 3 (lower is better) Translates to: TRWCHQHYSFLK*GTFVCMYISTT Trigger: TGTCGTGGAAATGTACATACAAACAAAAGTGCCTCACTTCAGAAATGAGTAGTGCTGATGGCACCAGCGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | CCATCACTCGCTGGTGCCATCAGCACTACTCATTTCTaGAGTGAGGCACTTTTGTTTGTATGTACATTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PSLAGAISTTHF*SEALLFVCTFP Trigger: TGGAAATGTACATACAAACAAAAGTGCCTCACTTCAGAAATGAGTAGTGCTGATGGCACCAGCGAGTGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CAGCCGCAACAGCTTTATTTTAGAGGAAAGCTTTTCTaGCAGCTTTGTCTTCAGTTGACTCGTCTCCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QPQQLYFRGKLF*QLCLQLTRLLE Trigger: TTCAAGGAGACGAGTCAACTGAAGACAAAGCTGCCAGAAAAGCTTTCCTCTAAAATAAAGCTGTTGCGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | AGTGAAATATTTACCCGGGGGATTTTCACCTCCTCTTaGAATCTCCCTGTTGCATTTACATCATGTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SEIFTRGIFTSS*NLPVAFTSCLL Trigger: CAGGAGACATGATGTAAATGCAACAGGGAGATTCCAAGAGGAGGTGAAAATCCCCCGGGTAAATATTTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CTTGTCTTTATAGGCTTTGTGGATCTTGTCAGTTACTaGCTTACAGTTGGTGACAAGACTCTTAGTGACCGG | + |
|
Preference number: 3 (lower is better) Translates to: LVFIGFVDLVSY*LTVGDKTLSDR Trigger: CCGGTCACTAAGAGTCTTGTCACCAACTGTAAGCCAGTAACTGACAAGATCCACAAAGCCTATAAAGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CTTTCAAATGAAGATCTTCTACACCCTGATTCGGTCTaGACTAGCTTCTTTGTGTATCCTCCTCCTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSNEDLLHPDSV*TSFFVYPPPGK Trigger: TTTCCCAGGAGGAGGATACACAAAGAAGCTAGTCCAGACCGAATCAGGGTGTAGAAGATCTTCATTTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | TCCCTTCAACTCCTCTTCTGGCTATGTTTGCAAAGCTaGAATAAGACAGGTATTCACCTTTGGGGACAACAT | + |
|
Preference number: 3 (lower is better) Translates to: SLQLLFWLCLQS*NKTGIHLWGQH Trigger: ATGTTGTCCCCAAAGGTGAATACCTGTCTTATTTCAGCTTTGCAAACATAGCCAGAAGAGGAGTTGAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | ATGGTCATGTTCTTCTTGGTCTGCTTGTTCAGCTCTTaGAAACCCTTGGGATTATTCAATTTCAGAAGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: MVMFFLVCLFSS*KPLGLFNFRRA Trigger: CGCTCTTCTGAAATTGAATAATCCCAAGGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAACATGACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCTTATGCTGGAAAGCTTaGGAATGCAAAGACTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RKCVPFWRNTTEIMTEDILCWKA*ECKDWG Trigger: GCCCCAGTCTTTGCATTCCAAAGCTTTCCAGCATAA...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGCAGGGCTGACTTGGACAAGTTATATCCTTTCAGAGTGATGTCTCCACGTCAGAGAATCCCCGTCTaGAAAAATAACAAAGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: LSRADLDKLYPFRVMSPRQRIPV*KNNKAI Trigger: TATTGCTTTGTTATTTTTCAAGACGGGGATTCTCTG...ACGTGGAGACATCACTCTGAAAGGATATAACTTGTCCAAGTCAGCCCTGCTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | TTTGCTGTCTGTAAAGTACGCCAACTGGGTCTTCAATaGCTCTTCCTCATCAAGAAGGTCTTGGAAATACTT | + |
|
Preference number: 3 (lower is better) Translates to: FAVCKVRQLGLQ*LFLIKKVLEIL Trigger: AAGTATTTCCAAGACCTTCTTGATGAGGAAGAGTCATTGAAGACCCAGTTGGCGTACTTTACAGACAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR TCA 72 bp | AAACTGCATGTCCTCAGAGTGACGCACCTTGTGAAATaGAGTCTTGTCAAATTCTTCAGGGAACATATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KLHVLRVTHLVK*SLVKFFREHIL Trigger: CAAGATATGTTCCCTGAAGAATTTGACAAGACTTCATTTCACAAGGTGCGTCACTCTGAGGACATGCAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | AATATAGTAAATATAATCAACGTTGCTAGTACGCAGTaGGTCCAAAACTTCAGCTTGTCTCGATATGCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: NIVNIINVASTQ*VQNFSLSRYAR Trigger: GCGGGCATATCGAGACAAGCTGAAGTTTTGGACCCACTGCGTACTAGCAACGTTGATTATATTTACTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | GTATTCACCTTTGGGGACAACATAGTGAGTCTGGTTTaGGAGAAGTGTTACTTTATACAATTCATGAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: VFTFGDNIVSLV*EKCYFIQFMKM Trigger: CATTTTCATGAATTGTATAAAGTAACACTTCTCCCAAACCAGACTCACTATGTTGTCCCCAAAGGTGAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CCA 72 bp | CATTTCAAGTTCTTATTACGAAAATGTGTGCCATTTTaGAGGAATACTACTGAGATCATGACTGAAGATATC | + |
|
Preference number: 3 (lower is better) Translates to: HFKFLLRKCVPF*RNTTEIMTEDI Trigger: GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCGTAATAAGAACTTGAAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | TCCTCAAAGCGGCTGGCAGACACGTCCTCATCCTGCTaGGACTGGCTGATGGCACTCAGGTCCCACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSKRLADTSSSC*DWLMALRSHSR Trigger: TCTGCTGTGGGACCTGAGTGCCATCAGCCAGTCCAAGCAGGATGAGGACGTGTCTGCCAGCCGCTTTGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR GCA 90 bp | CATTGCAGAAGAACCCGGTCTGCACGATGTCCCTTCTCCCCACGAGGCTGCCTCGGCACCTTAATGCAGTaGGTCAGCAGACATTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCRRTRSARCPFSPRGCLGTLMQ*VSRHSS Trigger: GCTGGAATGTCTGCTGACGCACTGCATTAAGGTGCC...GAGGCAGCCTCGTGGGGAGAAGGGACATCGTGCAGACCGGGTTCTTCTGCAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | AAAGACTGGGGCCCCTCCGCACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGCCTGCTTGGACTGGCTaGTGGCACTCAGGTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KDWGPSALAFKMDWFLSLPAWTG*WHSGPT Trigger: TGTGGGACCTGAGTGCCATCAGCCAGTCCAAGCAGG...CAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| 3UTR CAA 72 bp | ACATGTCGCTGGCAGCGTGGAAAGATGGATAAAGGGTaGGCAGATCCTTCAGGGTGCAGTTGGCTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCRWQRGKMDKG*ADPSGCSWLAG Trigger: CCCTGCCAGCCAACTGCACCCTGAAGGATCTGCCAACCCTTTATCCATCTTTCCACGCTGCCAGCGACATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | ACAGTCACGCCTAGTGTAGGCTGGGCCAATCTTGCATaGGTCTCCAACACCGGGGGTGGATTCAAAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVTPSVGWANLA*VSNTGGGFKAW Trigger: CCACGCTTTGAATCCACCCCCGGTGTTGGAGACCAATGCAAGATTGGCCCAGCCTACACTAGGCGTGACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR GCA 90 bp | AGGGACTCCGCTGTGGTGTCGAGGAGGGAGATGTTCACAGATGCTGAGGTAGGTGTGGGACCTCCAGGTTaGCTTTTGTTTCATCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSAVVSRREMFTDAEVGVGPPG*LLFHRS Trigger: GGACCGATGAAACAAAAGGCAACCTGGAGGTCCCAC...ACCTACCTCAGCATCTGTGAACATCTCCCTCCTCGACACCACAGCGGAGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | ACCCCTGCTCTGTATAAAGTAAGCAGGGTGGGCATTGGAAGGTATCATGGGTTTCCTTCAGGGTGCAGTTaGCTGGCAGGGGCGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPALYKVSRVGIGRYHGFPSGCS*LAGAGP Trigger: TGGACCCGCCCCTGCCAGCCAACTGCACCCTGAAGG...AAACCCATGATACCTTCCAATGCCCACCCTGCTTACTTTATACAGAGCAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| 3UTR CAA 72 bp | CAGCATTGCCTTCTGCCCTGTCACTCTCCTCTTCTTTaGGCAAGTGGCTTTCTGGGGGAACGATCAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QHCLLPCHSPLL*ASGFLGERSAV Trigger: CACCGCTGATCGTTCCCCCAGAAAGCCACTTGCCAAAAGAAGAGGAGAGTGACAGGGCAGAAGGCAATGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGTGAATTACCAAACAGCCAGAGCTGCCCGGGCAGCCCTCTaGACAGTTTGGCACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKFKASLVFRVNYQTARAARAAL*TVWHRP Trigger: TGGCCTGTGCCAAACTGTGCAGAGGGCTGCCCGGGC...AGCTCTGGCTGTTTGGTAATTCACTCTAAAGACCAGGCTGGCCTTGAACTTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | AGGGACTCCGCTGTGGTGTCGAGGAGGGAGATGTTCACAGATGCTGAGGTAGGTTACAGCATTGCCTTCTaGCCTGTCACTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDSAVVSRREMFTDAEVGYSIAF*PVTLLF Trigger: GAAGAGGAGAGTGACAGGGCAGAAGGCAATGCTGTA...ACCTACCTCAGCATCTGTGAACATCTCCCTCCTCGACACCACAGCGGAGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | AAAGACTGGGGCCCCTCCGCACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGCTCCTTGAAGGTCGGTaGGAATCCACTCAGGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: KDWGPSALAFKMDWFLSLLLEGR*ESTQER Trigger: GCGTTCCTGAGTGGATTCCCACCGACCTTCAAGGAG...CAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | CATTGCAGAAGAACCCGGTCTGCACGATGTCCCTTCTCCCCACGAGGCTGCCTCACCTCTACTGCTATCTaGATCTTGAACTCTTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HCRRTRSARCPFSPRGCLTSTAI*ILNSSS Trigger: CGACGAAGAGTTCAAGATCCAGATAGCAGTAGAGGT...GAGGCAGCCTCGTGGGGAGAAGGGACATCGTGCAGACCGGGTTCTTCTGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| 3UTR CAA 72 bp | GCGTCAGCAGACATTCCAGCTGCTTCTCACTCTTCTTaGTCGGTTCGGTTGTGTTCTTCCCGAGGGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASADIPAASHSS*SVRLCSSRGFP Trigger: GGGAAACCCTCGGGAAGAACACAACCGAACCGACAAAGAAGAGTGAGAAGCAGCTGGAATGTCTGCTGACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGAAGCCGAGACGATGGTaGCAACGACGCCCACGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FQDGLVSQSAVTGGRNQQKPRRW*QRRPRS Trigger: GCTTCGTGGGCGTCGTTGTCACCATCGTCTCGGCTT...CTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| CDS-3UTR GCA 90 bp | AGGGACTCCGCTGTGGTGTCGAGGAGGGAGATGTTCACAGATGCTGAGGTAGGTCATTCTTGGAGCTCATaGATGTGCAGAAAGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDSAVVSRREMFTDAEVGHSWSS*MCRKRF Trigger: GAACCGCTTTCTGCACATGCATGAGCTCCAAGAATG...ACCTACCTCAGCATCTGTGAACATCTCCCTCCTCGACACCACAGCGGAGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | CATTGCAGAAGAACCCGGTCTGCACGATGTCCCTTCTCCCCACGAGGCTGCCTCGATCTTGTCAGTTACTaGCTTACAGTTGGTGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCRRTRSARCPFSPRGCLDLVSY*LTVGDK Trigger: CTTGTCACCAACTGTAAGCCAGTAACTGACAAGATC...GAGGCAGCCTCGTGGGGAGAAGGGACATCGTGCAGACCGGGTTCTTCTGCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| 3UTR CAA 72 bp | ATTCCAGCTGCTTCTCACTCTTCTTTGTCGGTTCGGTaGTGTTCTTCCCGAGGGTTTCCCGCATGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPAASHSSLSVR*CSSRGFPAWLS Trigger: AGAGAGCCATGCGGGAAACCCTCGGGAAGAACACAACCGAACCGACAAAGAAGAGTGAGAAGCAGCTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | AAAATGTCCTGGTGGGTCACTATGGTCACTCGAGGGTaGTCAAGGTTCAGCCAGGATGGAATCTGCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KMSWWVTMVTRG*SRFSQDGICPL Trigger: CAACGGGCAGATTCCATCCTGGCTGAACCTTGACAACCCTCGAGTGACCATAGTGACCCACCAGGACATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR GCA 90 bp | AAAGACTGGGGCCCCTCCGCACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGATCCTGTCAATCATGTaGGGCATGTGTGCAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KDWGPSALAFKMDWFLSLILSIM*GMCAGT Trigger: AGTCCCTGCACACATGCCGCACATGATTGACAGGAT...CAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | CATTGCAGAAGAACCCGGTCTGCACGATGTCCCTTCTCCCCACGAGGCTGCCTCTCAGGGAACATATCTTaGAGTTCTTGCATAACGATC | + |
|
Preference number: 4 (lower is better) Translates to: HCRRTRSARCPFSPRGCLSGNIS*SSCITI Trigger: GATCGTTATGCAAGAACTCCAAGATATGTTCCCTGA...GAGGCAGCCTCGTGGGGAGAAGGGACATCGTGCAGACCGGGTTCTTCTGCAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | AAAGACTGGGGCCCCTCCGCACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGAGCTTTGTCTTCAGTTaGCTCGTCTCCTTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KDWGPSALAFKMDWFLSLSFVFS*LVSLKV Trigger: GACCTTCAAGGAGACGAGTCAACTGAAGACAAAGCT...CAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | CACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAAAAAGGGACGTCAGCCTaGGGAAGAGGTGTCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLSRWTGFSVCSNWGKKKGTSA*GRGVTG Trigger: CCCAGTGACACCTCTTCCTCAGGCTGACGTCCCTTT...TTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACGCAGATCCTTCAGGGTaGAGTTGGCTGGCAGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SKEETSQKLCWKALECKDADPSG*SWLAGA Trigger: CGCCCCTGCCAGCCAACTGCACCCTGAAGGATCTGC...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGTTTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTACCACCTCTCCGAACTaGAAAGCCGAGACGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MGFQMDTITRWCHQHYSFTTSPN*KAETMV Trigger: CACCATCGTCTCGGCTTTCCAGTTCGGAGAGGTGGT...AAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAAACCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGGTAAACCACGTCGATTaGCATGGGCAGACAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FQDGLVSQSAVTGGRNQQVNHVD*HGQTEP Trigger: CGGCTCTGTCTGCCCATGCCAATCGACGTGGTTTAC...CTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTCTGAAGAGAGCCTCTCCGAACTaGAAAGCCGAGACGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQMDTITRWCHQHYSFLKRASPN*KAETMV Trigger: CACCATCGTCTCGGCTTTCCAGTTCGGAGAGGCTCT...CTTCAGAAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR CCA 90 bp | CCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTACAAGCTATTGACCCACGTCGATTGGCATaGGCAGACAGAGCCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PTGPSANPLKVQAVQAIDPRRLA*ADRASP Trigger: CGGAGAGGCTCTGTCTGCCCATGCCAATCGACGTGG...GTCAATAGCTTGTACAGCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | AAGCTTTGGAATGCAAAGACTGGGGCCCCTCCGCACTaGCTTTCAAGATGGACTGGTTTCTCAGTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLWNAKTGAPPH*LSRWTGFSVCS Trigger: ACTGCAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTTGCATTCCAAAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | CCGCAGGATAAGACGTTACAGGCTTGGTCACAGAACTaGTCAGCCAGCCAGGAGTTTGCACATCCTTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PQDKTLQAWSQN*SASQEFAHPWL Trigger: TAACCAAGGATGTGCAAACTCCTGGCTGGCTGACAAGTTCTGTGACCAAGCCTGTAACGTCTTATCCTGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | AACGTTGCTAGTACGCAGTGGGTCCAAAACTTCAGCTaGTCTCGATATGCCCGCCATTCTTGGAGCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NVASTQWVQNFS*SRYARHSWSSC Trigger: GCATGAGCTCCAAGAATGGCGGGCATATCGAGACAAGCTGAAGTTTTGGACCCACTGCGTACTAGCAACGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGCTTGTCAGGGAGGGTTTAGACAGAGCCGATTCTaGAAGGATTTCCCAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FSVCSNWGKKPAACQGGFRQSRF*KDFPAM Trigger: CATTGCTGGGAAATCCTTTCAGAATCGGCTCTGTCT...AAACCCTCCCTGACAAGCTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCAGAGGCAGGTGAATCTCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGAACAAACCGGTTCCCTaGAGTATTACCAGAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEAEAGESLSSRPAWSLENKPVP*SITRAV Trigger: GACTGCTCTGGTAATACTGCAGGGAACCGGTTTGTT...CTCTAAAGACCAGGCTGGCCTTGAACTTAGAGATTCACCTGCCTCTGCTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | TTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGGTTGCAAATCCAAGTTaGTCAGCCTCACCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FQDGLVSQSAVTGGRNQQVANPS*SASPGP Trigger: AGGCCCAGGTGAGGCTGAGCAACTTGGATTTGCAAC...CTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGCTTGTCAGGGAGGGTTTAATATTCCGTACCCATaGCGCGTGTCTCTCGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSVCSNWGKKPAACQGGFNIPYP*RVSLDR Trigger: TCTATCGAGAGACACGCGCCATGGGTACGGAATATT...AAACCCTCCCTGACAAGCTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTCTGAAGAAGGTTCAGCCAGGATaGAATCTGCCCGTTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FQMDTITRWCHQHYSFLKKVQPG*NLPVGD Trigger: GTCACCAACGGGCAGATTCCATCCTGGCTGAACCTT...CTTCAGAAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | AAAGACTGGGGCCCCTCCGCACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGAAGTGGCTCAGATTTTaGAAAATGTCCTGGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KDWGPSALAFKMDWFLSLKWLRF*KMSWWV Trigger: GACCCACCAGGACATTTTCCAAAATCTGAGCCACTT...CAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCAGAGGCAGGTGAATCTCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGTGCTTCCTGAGTCGGTaGGATGTTGTTGAGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QEAEAGESLSSRPAWSLECFLSR*DVVELS Trigger: ACTCAACTCAACAACATCCCACCGACTCAGGAAGCA...CTCTAAAGACCAGGCTGGCCTTGAACTTAGAGATTCACCTGCCTCTGCTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| 3UTR CAA 72 bp | ATCCCACTGTGCATTATCAGGTGTATGGTTTTCCACTaGTTTGCAATGGACGCGTGGCGGATGATGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPLCIIRCMVFH*FAMDAWRMMGL Trigger: CAACCCCATCATCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATGCACAGTGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | TGCAAATCCAAGTTGCTCAGCCTCACCTGGGCCTCTTaGGGAAGGAGTGAAATATTTACCCGGGGGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CKSKLLSLTWAS*GRSEIFTRGIF Trigger: GAAAATCCCCCGGGTAAATATTTCACTCCTTCCCAAAGAGGCCCAGGTGAGGCTGAGCAACTTGGATTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACTCCGCTGTGGTGTCGAGGAGGGAGATGTTCACAGATGCTGAGGTAGGTTCATCGGTCCTAGCTTaGGGTTTTATTTTAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: RDSAVVSRREMFTDAEVGSSVLA*GFILVS Trigger: AGATACTAAAATAAAACCTCAAGCTAGGACCGATGA...ACCTACCTCAGCATCTGTGAACATCTCCCTCCTCGACACCACAGCGGAGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | TCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGTGAATTACCAAACAGCCAGAGCTATTCCTCCACCAAACTaGCAGTGCTGTCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKFKASLVFRVNYQTARAIPPPN*QCCPAP Trigger: TGGAGCTGGACAGCACTGGCAGTTTGGTGGAGGAAT...AGCTCTGGCTGTTTGGTAATTCACTCTAAAGACCAGGCTGGCCTTGAACTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | CTTTCAACGTCAATCTCGAGCTCTTCAGTAGTTGTTAGCGATTCAAGACCACTTCACGGTCACTGTCTCTaGTGGGGCAGTCCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTSISSSSVVVSDSRPLHGHCL*WGSPSL Trigger: GAGAGATGGACTGCCCCAGCAGAGACAGTGACCGTG...AAGTGGTCTTGAATCGCTAACAACTACTGAAGAGCTCGAGATTGACGTTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | CACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAACCTGGTGGGTCACTATaGTCACTCGAGGGTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLLSRWTGFSVCSNWGKKPGGSL*SLEGCQ Trigger: TTGACAACCCTCGAGTGACCATAGTGACCCACCAGG...TTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | ACCCCTGCTCTGTATAAAGTAAGCAGGGTGGGCATTGGAAGGTATCATGGGTTTGCCCTCTGCACAGTTTaGCACAGGCCATGTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TPALYKVSRVGIGRYHGFALCTV*HRPCQI Trigger: TATTTGACATGGCCTGTGCCAAACTGTGCAGAGGGC...AAACCCATGATACCTTCCAATGCCCACCCTGCTTACTTTATACAGAGCAGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | ACCCCTGCTCTGTATAAAGTAAGCAGGGTGGGCATTGGAAGGTATCATGGGTTTCCAGGGCAAAAAGCCTaGATAATTCTGCTGCAACCG | + |
|
Preference number: 4 (lower is better) Translates to: TPALYKVSRVGIGRYHGFPGQKA*IILLQP Trigger: CGGTTGCAGCAGAATTATCCAGGCTTTTTGCCCTGG...AAACCCATGATACCTTCCAATGCCCACCCTGCTTACTTTATACAGAGCAGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGTGAATTACCAAACAGCCAGAGCTGGTCGTGAATTCTCGTaGCCAGTGTTCGGATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKFKASLVFRVNYQTARAGREFS*PVFGFP Trigger: GGGAAATCCGAACACTGGCCACGAGAATTCACGACC...AGCTCTGGCTGTTTGGTAATTCACTCTAAAGACCAGGCTGGCCTTGAACTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGTTTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTGTTCCGATACTCTCTTaGCAGCTCAAACTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MGFQMDTITRWCHQHYSFVPILS*QLKLGR Trigger: CCTTCCCAGTTTGAGCTGCCAAGAGAGTATCGGAAC...AAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAAACCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | AATTCTTCAGGGAACATATCTTGGAGTTCTTGCATAACGATCCTGTCAATCATGAAGCCGAGACGATGGTaGCAACGACGCCCACGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSSGNISWSSCITILSIMKPRRW*QRRPRS Trigger: GCTTCGTGGGCGTCGTTGTCACCATCGTCTCGGCTT...CATGATTGACAGGATCGTTATGCAAGAACTCCAAGATATGTTCCCTGAAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTTTGTCAACAAGCCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCGGCAGTCCATCTCTCTaGTCTGTGTTCACCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVCQQADRSFGKSFKSTSGSPSL*SVFTSK Trigger: TTTGCTGGTGAACACAGATCAGAGAGATGGACTGCC...GCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGGCTTGTTGACAAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | AAAGACTGGGGCCCCTCCGCACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGACGCACCTTGTGAAATaGAGTCTTGTCAAATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDWGPSALAFKMDWFLSLTHLVK*SLVKFF Trigger: GAAGAATTTGACAAGACTTCATTTCACAAGGTGCGT...CAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | CCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTACAAGCTATTGACACTCATAGAAGTCCCTaGGGACAGCCTTCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTGPSANPLKVQAVQAIDTHRSP*GQPSLS Trigger: GGACAGTGAAGGCTGTCCTCAGGGACTTCTATGAGT...GTCAATAGCTTGTACAGCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | CCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTACAAGCTATTGACCATGTGCGGCATGTGTaGAGGGACTTTCCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PTGPSANPLKVQAVQAIDHVRHV*RDFPGC Trigger: ACATCCAGGAAAGTCCCTGCACACATGCCGCACATG...GTCAATAGCTTGTACAGCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | GAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACTGGGGCAAGACGTTACAGGCTTaGTCACAGAACTTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EETSQKLCWKALECKDWGKTLQA*SQNLSA Trigger: GGCTGACAAGTTCTGTGACCAAGCCTGTAACGTCTT...GCCCCAGTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCAGAGGCAGGTGAATCTCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGCAAACTGGGAAGGTATaGGAAACATGGACTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: QEAEAGESLSSRPAWSLEQTGKV*ETWTHR Trigger: TCTATGAGTCCATGTTTCCCATACCTTCCCAGTTTG...CTCTAAAGACCAGGCTGGCCTTGAACTTAGAGATTCACCTGCCTCTGCTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | GAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACTGGGGCGTTGCTAGTACGCAGTaGGTCCAAAACTTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EETSQKLCWKALECKDWGVASTQ*VQNFSL Trigger: CAAGCTGAAGTTTTGGACCCACTGCGTACTAGCAAC...GCCCCAGTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | TTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGAACAAAACATGGTACTaGTCTCGGCTCCATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FQDGLVSQSAVTGGRNQQNKTWY*SRLHSR Trigger: TCTGGAATGGAGCCGAGATCAGTACCATGTTTTGTT...CTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | CCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTACAAGCTATTGACGGGATGTTGTTGAGTTaGGTGATATTAGCGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTGPSANPLKVQAVQAIDGMLLS*VILAGS Trigger: GCTCCCCGCTAATATCACTCAACTCAACAACATCCC...GTCAATAGCTTGTACAGCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | TCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGTGAATTACCAAACAGCCAGAGCTGCAGTTCAAGGTCAGTaGCATTCACCCAGGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKFKASLVFRVNYQTARAAVQGQ*HSPRCK Trigger: TTTACACCTGGGTGAATGGCACTGACCTTGAACTGC...AGCTCTGGCTGTTTGGTAATTCACTCTAAAGACCAGGCTGGCCTTGAACTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTTGCTCTTCCTCCATGTaGTCTCGGACCTGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GCISSSLLFFDRSWLTPACSSSM*SRTCCS Trigger: GCTACAGCAGGTCCGAGAGCACATGGAGGAAGAGCA...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | ATGGGTTTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTTCTCCACGTTCTAGTTaGAAATCCAAGTTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MGFQMDTITRWCHQHYSFSPRSS*KSKLLS Trigger: GCTGAGCAACTTGGATTTGCAACTAGAACGTGGAGA...AAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAAACCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCAGAGGCAGGTGAATCTCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGATTTTCACCTCCTCTTaGAATCTCCCTGTTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: QEAEAGESLSSRPAWSLEIFTSS*NLPVAF Trigger: AAATGCAACAGGGAGATTCCAAGAGGAGGTGAAAAT...CTCTAAAGACCAGGCTGGCCTTGAACTTAGAGATTCACCTGCCTCTGCTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | CACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAACTTGGCAGCTCAAACTaGGAAGGTATGGGAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: HLLSRWTGFSVCSNWGKKLGSSN*EGMGNM Trigger: CATGTTTCCCATACCTTCCCAGTTTGAGCTGCCAAG...TTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACGTAAACCACGTCGATTaGCATGGGCAGACAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKEETSQKLCWKALECKDVNHVD*HGQTEP Trigger: AGGCTCTGTCTGCCCATGCCAATCGACGTGGTTTAC...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | TTCGCAATCAGGCCCGCACACGAGGTCACAGTATTCTaGGGGAATGAGTTAAACAAGCTCAAAGCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FAIRPAHEVTVF*GNELNKLKALS Trigger: TGAAAGTGCTTTGAGCTTGTTTAACTCATTCCCCAAGAATACTGTGACCTCGTGTGCGGGCCTGATTGCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| CDS-3UTR GCA 90 bp | CATTTCCACGACATAATTACATCCGGTGAGCAGCACTGCTACGTGACACTAGCCATGTTCTTCTTGGTCTaGTTGTTCAGCTCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HFHDIITSGEQHCYVTLAMFFLV*LFSSWK Trigger: TTTCCAAGAGCTGAACAAGCAGACCAAGAAGAACAT...GGCTAGTGTCACGTAGCAGTGCTGCTCACCGGATGTAATTATGTCGTGGAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGTTTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTACAGGTATTCACCTTTaGGGACAACATAGTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MGFQMDTITRWCHQHYSFTGIHL*GQHSES Trigger: AGACTCACTATGTTGTCCCCAAAGGTGAATACCTGT...AAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAAACCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCAACGTCAATCTCGAGCTCTTCAGTAGTTGTTAGCGATTCAAGACCACTTACCAGCAAAGCCATGTaGACGTCTGTGAGAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSTSISSSSVVVSDSRPLTSKAM*TSVRRV Trigger: AACCCTTCTCACAGACGTCCACATGGCTTTGCTGGT...AAGTGGTCTTGAATCGCTAACAACTACTGAAGAGCTCGAGATTGACGTTGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TCAACGTCAATCTCGAGCTCTTCAGTAGTTGTTAGCGATTCAAGACCACTTGACGTGAAAGGTTCTCTTTaGACACAGTCACGCCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: STSISSSSVVVSDSRPLDVKGSL*TQSRLV Trigger: CACTAGGCGTGACTGTGTCCAAAGAGAACCTTTCAC...GTCAAGTGGTCTTGAATCGCTAACAACTACTGAAGAGCTCGAGATTGACGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | AGGGTTTGTCAACAAGCCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCGTAAAGTACGCCAACTaGGTCTTCAATGACTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVCQQADRSFGKSFKSTSVKYAN*VFNDSS Trigger: GGAAGAGTCATTGAAGACCCAGTTGGCGTACTTTAC...GCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGGCTTGTTGACAAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | ACCCCTGCTCTGTATAAAGTAAGCAGGGTGGGCATTGGAAGGTATCATGGGTTTTGTGTATCCTCCTCCTaGGAAATATCTTTCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPALYKVSRVGIGRYHGFCVSSS*EISFAS Trigger: TGAAGCGAAAGATATTTCCCAGGAGGAGGATACACA...AAACCCATGATACCTTCCAATGCCCACCCTGCTTACTTTATACAGAGCAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| 3UTR CAA 72 bp | ATCTTCTACACCCTGATTCGGTCTGGACTAGCTTCTTaGTGTATCCTCCTCCTGGGAAATATCTTTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFYTLIRSGLAS*CILLLGNIFRF Trigger: GAAGCGAAAGATATTTCCCAGGAGGAGGATACACAAAGAAGCTAGTCCAGACCGAATCAGGGTGTAGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACCGTGTCCACCTCTACTaGTATCTGGATCTTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SKEETSQKLCWKALECKDRVHLY*YLDLEL Trigger: GAGTTCAAGATCCAGATAGCAGTAGAGGTGGACACG...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | TTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGAATGTATCTTTTAGTTaGCTCCCGGTATGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQDGLVSQSAVTGGRNQQNVSFS*LPVCLL Trigger: CAGCAAACATACCGGGAGGCAACTAAAAGATACATT...CTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | ACCCCTGCTCTGTATAAAGTAAGCAGGGTGGGCATTGGAAGGTATCATGGGTTTATTGAGGGGCTGAACTaGACTCATGAGGTAATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPALYKVSRVGIGRYHGFIEGLN*THEVIK Trigger: TTTTATTACCTCATGAGTGCAGTTCAGCCCCTCAAT...AAACCCATGATACCTTCCAATGCCCACCCTGCTTACTTTATACAGAGCAGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACAGATGGATAAAGGGTTaGCAGATCCTTCAGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKEETSQKLCWKALECKDRWIKG*QILQGA Trigger: TGCACCCTGAAGGATCTGCCAACCCTTTATCCATCT...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGTGAATTACCAAACAGCCAGAGCTTCACCTGGGCCTCTTTaGGAAGGAGTGAAATATTTA | + |
|
Preference number: 4 (lower is better) Translates to: SKFKASLVFRVNYQTARASPGPL*EGVKYL Trigger: TAAATATTTCACTCCTTCCCAAAGAGGCCCAGGTGA...AGCTCTGGCTGTTTGGTAATTCACTCTAAAGACCAGGCTGGCCTTGAACTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | GAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACTGGGGCTTAGCAGGGCTGACTTaGACAAGTTATATCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EETSQKLCWKALECKDWGLAGLT*TSYILS Trigger: TGAAAGGATATAACTTGTCCAAGTCAGCCCTGCTAA...GCCCCAGTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TCAACGTCAATCTCGAGCTCTTCAGTAGTTGTTAGCGATTCAAGACCACTTGACGTCCGGGCATCTTTATaGTTGTGGTCAATGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: STSISSSSVVVSDSRPLDVRASL*LWSMLS Trigger: TGACAACATTGACCACAACCATAAAGATGCCCGGAC...GTCAAGTGGTCTTGAATCGCTAACAACTACTGAAGAGCTCGAGATTGACGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| 3UTR CAA 72 bp | TCCTTCCCATCGATGGTCATGTTCTTCTTGGTCTGCTaGTTCAGCTCTTGGAAACCCTTGGGATTATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFPSMVMFFLVC*FSSWKPLGLFN Trigger: ATTGAATAATCCCAAGGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAACATGACCATCGATGGGAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR TCA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCCTGCTATCTGGATCTTaGACTCTTCGTCGTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RKCVPFWRNTTEIMTEDILLSGS*TLRRWR Trigger: ACGCCAACGACGAAGAGTTCAAGATCCAGATAGCAG...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | ACCCCTGCTCTGTATAAAGTAAGCAGGGTGGGCATTGGAAGGTATCATGGGTTTTCTGTGTCTACTTCATaGAAGACTTGGGAAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: TPALYKVSRVGIGRYHGFSVSTS*KTWEIL Trigger: CAATATTTCCCAAGTCTTTCATGAAGTAGACACAGA...AAACCCATGATACCTTCCAATGCCCACCCTGCTTACTTTATACAGAGCAGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | TCAACGTCAATCTCGAGCTCTTCAGTAGTTGTTAGCGATTCAAGACCACTTGACTGGTTCGTATCATCTTaGAAGCGATTTCTTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STSISSSSVVVSDSRPLDWFVSS*KRFLPL Trigger: GAGAGGAAGAAATCGCTTTCAAGATGATACGAACCA...GTCAAGTGGTCTTGAATCGCTAACAACTACTGAAGAGCTCGAGATTGACGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTAGCCAGGATGGAATCTaGCCGTTGGTGACAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCISSSLLFFDRSWLTPASQDGI*PLVTMK Trigger: TTTCATTGTCACCAACGGGCAGATTCCATCCTGGCT...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCGGGACAGCCCTTCGATaGGGTGAATGTGACTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKCVPFWRNTTEIMTEDIGTALR*GECDFQ Trigger: TTGAAAGTCACATTCACCGCATCGAAGGGCTGTCCC...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCCCACCAAACTGCCAGTaGTGTCCAGCTCCAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: RKCVPFWRNTTEIMTEDIPPNCQ*CPAPIF Trigger: GAATATTGGAGCTGGACAGCACTGGCAGTTTGGTGG...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTAGCCAGCCAGGAGTTTaGACATCCTTGGTTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GCISSSLLFFDRSWLTPASQPGV*TSLVTV Trigger: TACTGTAACCAAGGATGTGCAAACTCCTGGCTGGCT...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | ACCCCTGCTCTGTATAAAGTAAGCAGGGTGGGCATTGGAAGGTATCATGGGTTTTCTTCTGGCTATGTTTaGAAAGCTGAAATAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPALYKVSRVGIGRYHGFSSGYV*KAEIRQ Trigger: CTGTCTTATTTCAGCTTTGCAAACATAGCCAGAAGA...AAACCCATGATACCTTCCAATGCCCACCCTGCTTACTTTATACAGAGCAGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGTGAATTACCAAACAGCCAGAGCTCTGAAAGTAGGCAAGTaGCTCAGATTTTGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SKFKASLVFRVNYQTARALKVGK*LRFWKM Trigger: CATTTTCCAAAATCTGAGCCACTTGCCTACTTTCAG...AGCTCTGGCTGTTTGGTAATTCACTCTAAAGACCAGGCTGGCCTTGAACTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | ACCCCTGCTCTGTATAAAGTAAGCAGGGTGGGCATTGGAAGGTATCATGGGTTTGCATTATCAGGTGTATaGTTTTCCACTTGTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TPALYKVSRVGIGRYHGFALSGV*FSTCLQ Trigger: TTGCAAACAAGTGGAAAACCATACACCTGATAATGC...AAACCCATGATACCTTCCAATGCCCACCCTGCTTACTTTATACAGAGCAGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCAACGTCAATCTCGAGCTCTTCAGTAGTTGTTAGCGATTCAAGACCACTTGGAAGCGTTTCTCTTTaGGGACATCTTCAAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTSISSSSVVVSDSRPLGSVSL*GHLQKG Trigger: TCCCTTTTGAAGATGTCCCCAAAGAGAAACGCTTCC...AAGTGGTCTTGAATCGCTAACAACTACTGAAGAGCTCGAGATTGACGTTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACCACCCTGATTCGGTCTaGACTAGCTTCTTTGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SKEETSQKLCWKALECKDHPDSV*TSFFVY Trigger: ATACACAAAGAAGCTAGTCCAGACCGAATCAGGGTG...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| 3UTR CAA 72 bp | TGCTATCTGGATCTTGAACTCTTCGTCGTTGGCGTTTaGAAGAGTGAGGTTAAAATAGATCGTGGTTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CYLDLELFVVGV*KSEVKIDRGCV Trigger: AACGCAACCACGATCTATTTTAACCTCACTCTTCAAAACGCCAACGACGAAGAGTTCAAGATCCAGATAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | TCTGCAAATGTATCTTTTAGTTGCCTCCCGGTATGTTaGCTGTCTGTAAAGTACGCCAACTGGGTCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SANVSFSCLPVC*LSVKYANWVFN Trigger: ATTGAAGACCCAGTTGGCGTACTTTACAGACAGCAAACATACCGGGAGGCAACTAAAAGATACATTTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | CTTGTCAAATTCTTCAGGGAACATATCTTGGAGTTCTaGCATAACGATCCTGTCAATCATGTGCGGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVKFFREHILEF*HNDPVNHVRHV Trigger: CACATGCCGCACATGATTGACAGGATCGTTATGCAAGAACTCCAAGATATGTTCCCTGAAGAATTTGACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | CAGTGTTCGGATTTCCCTATCAGACAAGACACCAGATaGGTCTGTGTCTACTTCATGAAAGACTTGGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QCSDFPIRQDTR*VCVYFMKDLGN Trigger: ATTTCCCAAGTCTTTCATGAAGTAGACACAGACCAATCTGGTGTCTTGTCTGATAGGGAAATCCGAACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR TCA 90 bp | CCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTACAAGCTATTGACTATATCCTTTCAGAGTaGTGTCTCCACGTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTGPSANPLKVQAVQAIDYILSE*CLHVLV Trigger: AACTAGAACGTGGAGACATCACTCTGAAAGGATATA...GTCAATAGCTTGTACAGCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTAACTGGCCAACCACATaGGAAACATTGGTTCGTATC | + |
|
Preference number: 4 (lower is better) Translates to: GCISSSLLFFDRSWLTPANWPTT*ETLVRI Trigger: GATACGAACCAATGTTTCTCATGTGGTTGGCCAGTT...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | TTTGTCAACAAGCCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTAAAACCTGTCAAATCCTaGAAGCTTAAAGGTAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FVNKPTGPSANPLKVQAVKPVKS*KLKGRS Trigger: CGACCTACCTTTAAGCTTGCAGGATTTGACAGGTTT...TACAGCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGGCTTGTTGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACAGAGGAAAGCTTTTCTaGCAGCTTTGTCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKEETSQKLCWKALECKDRGKLF*QLCLQL Trigger: CAACTGAAGACAAAGCTGCCAGAAAAGCTTTCCTCT...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TGGATCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAATGGTCATGTTCTTCTTaGTCTGCTTGTTCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WIKGGDKPEIMLESFGMQWSCSS*SACSAL Trigger: AAGAGCTGAACAAGCAGACCAAGAAGAACATGACCA...TTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTGTTCCTTCCCATCGATaGTCATGTTCTTCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCISSSLLFFDRSWLTPAVPSHR*SCSSWS Trigger: AGACCAAGAAGAACATGACCATCGATGGGAAGGAAC...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | TTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTCTGAAGATAGTGAGTCTGGTTTaGGAGAAGTGTTACTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: FQMDTITRWCHQHYSFLKIVSLV*EKCYFI Trigger: TATAAAGTAACACTTCTCCCAAACCAGACTCACTAT...CTTCAGAAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR GCA 90 bp | TTTGTCAACAAGCCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTATTGGAATCTCCCTGTTaGATTTACATCATGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FVNKPTGPSANPLKVQAVLESPC*IYIMSP Trigger: AGGAGACATGATGTAAATGCAACAGGGAGATTCCAA...TACAGCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGGCTTGTTGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | TGGATCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAACTATGTTTGCAAAGCTaGAATAAGACAGGTATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WIKGGDKPEIMLESFGMQLCLQS*NKTGIH Trigger: GTGAATACCTGTCTTATTTCAGCTTTGCAAACATAG...TTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR TCA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTTTTCTTCCTCTCCCATaGTTTCAAACCTGTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GCISSSLLFFDRSWLTPAFLPLP*FQTCIC Trigger: ACAAATACAGGTTTGAAATCATGGGAGAGGAAGAAA...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CCA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTGCTCTTGGAAACCCTTaGGATTATTCAATTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GCISSSLLFFDRSWLTPAALGNP*DYSISE Trigger: TTCTGAAATTGAATAATCCCAAGGGTTTCCAAGAGC...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| 3UTR CAA 72 bp | TCAGCACTACTCATTTCTGAAGTGAGGCACTTTTGTTaGTATGTACATTTCCACGACATAATTACATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SALLISEVRHFC*YVHFHDIITSG Trigger: ACCGGATGTAATTATGTCGTGGAAATGTACATACAAACAAAAGTGCCTCACTTCAGAAATGAGTAGTGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| 3UTR CAA 72 bp | CTGGATGTGAATCCAAACTTGCTGTTGAGAATTTTATaGACGTATCGGAGGGAGTCTGCAAATGTATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDVNPNLLLRIL*TYRRESANVSF Trigger: AAAAGATACATTTGCAGACTCCCTCCGATACGTCAATAAAATTCTCAACAGCAAGTTTGGATTCACATCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR CCA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCAAACCTTTTGACCTTTaGAGTGGCTGTAAAAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: RKCVPFWRNTTEIMTEDIKPFDL*SGCKNR Trigger: ACGATTTTTACAGCCACTCCAAAGGTCAAAAGGTTT...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| 3UTR CAA 72 bp | GGTATTCACCTTTGGGGACAACATAGTGAGTCTGGTTaGGGAGAAGTGTTACTTTATACAATTCATGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GIHLWGQHSESG*GEVLLYTIHEN Trigger: ATTTTCATGAATTGTATAAAGTAACACTTCTCCCAAACCAGACTCACTATGTTGTCCCCAAAGGTGAATACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACTCCGCTGTGGTGTCGAGGAGGGAGATGTTCACAGATGCTGAGGTAGGTTCCTTCAGGGTGCAGTaGGCTGGCAGGGGCGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RDSAVVSRREMFTDAEVGSFRVQ*AGRGGS Trigger: GGACCCGCCCCTGCCAGCCAACTGCACCCTGAAGGA...ACCTACCTCAGCATCTGTGAACATCTCCCTCCTCGACACCACAGCGGAGTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS TCA 90 bp | CATGGGCAGACAGAGCCTCTCCGAACTGGAAAGCCGAGACGATGGTaGCAACGACGCCCACGAAGCAGACGTAGAGCCCATACCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGQTEPLRTGKPRRW*QRRPRSRRRAHTCG Trigger: CCCACAGGTATGGGCTCTACGTCTGCTTCGTGGGCGTCGTTGTCACCATCGTCTCGGCTTTCCAGTTCGGAGAGGCTCTGTCTGCCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
||
| CDS GCA 90 bp | TTCTTCCCGAGGGTTTCCCGCATGGCTCTCTGCTCTTCCTCCATGTaGTCTCGGACCTGCTGTAGCTCCTTTAGCAGTTCAAGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FFPRVSRMALCSSSM*SRTCCSSFSSSRSV Trigger: CACTGACCTTGAACTGCTAAAGGAGCTACAGCAGGTCCGAGAGCACATGGAGGAAGAGCAGAGAGCCATGCGGGAAACCCTCGGGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020251.10 ENSMUST00000127615.8 ENSMUST00000130301.8 |
||
| CDS-3UTR CAA 90 bp | CATTGCAGAAGAACCCGGTCTGCACGATGTCCCTTCTCCCCACGAGGCTGCCTCTCATGTCTCCTGATCTaGGGGAAGCGTTTCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HCRRTRSARCPFSPRGCLSCLLI*GKRFSL Trigger: CAAAGAGAAACGCTTCCCCAAGATCAGGAGACATGA...GAGGCAGCCTCGTGGGGAGAAGGGACATCGTGCAGACCGGGTTCTTCTGCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS GCA 90 bp | TGTGCTCTCGGACCTGCTGTAGCTCCTTTAGCAGTTCAAGGTCAGTaGCATTCACCCAGGTGTAAACCACGTCGATTGGCATGGGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CALGPAVAPLAVQGQ*HSPRCKPRRLAWAD Trigger: GTCTGCCCATGCCAATCGACGTGGTTTACACCTGGGTGAATGGCACTGACCTTGAACTGCTAAAGGAGCTACAGCAGGTCCGAGAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020251.10 ENSMUST00000127615.8 ENSMUST00000130301.8 |
||
| CDS-3UTR CAA 90 bp | AAAGACTGGGGCCCCTCCGCACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGTGTAAACCACGTCGATaGGCATGGGCAGACAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KDWGPSALAFKMDWFLSLCKPRR*AWADRA Trigger: GGCTCTGTCTGCCCATGCCAATCGACGTGGTTTACA...CAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTGCGGAGGGGCCCCAGTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020251.10 ENSMUST00000151273.8 |
||
| CDS-3UTR CAA 90 bp | CATTGCAGAAGAACCCGGTCTGCACGATGTCCCTTCTCCCCACGAGGCTGCCTCGATGGAATCTGCCCGTaGGTGACAATGAAAATATTC | + |
|
Preference number: 5 (lower is better) Translates to: HCRRTRSARCPFSPRGCLDGICP*VTMKIF Trigger: GAATATTTTCATTGTCACCAACGGGCAGATTCCATC...GAGGCAGCCTCGTGGGGAGAAGGGACATCGTGCAGACCGGGTTCTTCTGCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGCTTGTCAGGGAGGGTTTCACTCTCCTCTTCTTTaGGCAAGTGGCTTTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVCSNWGKKPAACQGGFHSPLL*ASGFLG Trigger: CCCCAGAAAGCCACTTGCCAAAAGAAGAGGAGAGTG...AAACCCTCCCTGACAAGCTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGCTTGTCAGGGAGGGTTTAAGATGGATAAAGGGTaGGCAGATCCTTCAGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSVCSNWGKKPAACQGGFKMDKG*ADPSGC Trigger: GCACCCTGAAGGATCTGCCAACCCTTTATCCATCTT...AAACCCTCCCTGACAAGCTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | CATTATCAGGTGTATGGTTTTCCACTTGTTTGCAATGGACGCGTGGCGGATGATTGTAAACCACGTCGATaGGCATGGGCAGACAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: HYQVYGFPLVCNGRVADDCKPRR*AWADRA Trigger: GGCTCTGTCTGCCCATGCCAATCGACGTGGTTTACA...ATCATCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCATACACCTGATAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| CDS-3UTR CAA 90 bp | TTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGATGGTCACTCGAGGGTaGTCAAGGTTCAGCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: FQDGLVSQSAVTGGRNQQMVTRG*SRFSQD Trigger: ATCCTGGCTGAACCTTGACAACCCTCGAGTGACCAT...CTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | AGGGACTCCGCTGTGGTGTCGAGGAGGGAGATGTTCACAGATGCTGAGGTAGGTTGTCAAATAAACCTTTaGACCTTTGGAGTGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RDSAVVSRREMFTDAEVGCQINL*TFGVAV Trigger: TACAGCCACTCCAAAGGTCAAAAGGTTTATTTGACA...ACCTACCTCAGCATCTGTGAACATCTCCCTCCTCGACACCACAGCGGAGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | ACCCCTGCTCTGTATAAAGTAAGCAGGGTGGGCATTGGAAGGTATCATGGGTTTGCTTGGTCACAGAACTaGTCAGCCAGCCAGGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPALYKVSRVGIGRYHGFAWSQN*SASQEF Trigger: AAACTCCTGGCTGGCTGACAAGTTCTGTGACCAAGC...AAACCCATGATACCTTCCAATGCCCACCCTGCTTACTTTATACAGAGCAGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | GAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACTGGGGCACTGCTATCTGGATCTaGAACTCTTCGTCGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EETSQKLCWKALECKDWGTAIWI*NSSSLA Trigger: CGCCAACGACGAAGAGTTCAAGATCCAGATAGCAGT...GCCCCAGTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | CCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTACAAGCTATTGACGTTGTAGAATTCAGTTaGGGCGCCTCCCTCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTGPSANPLKVQAVQAIDVVEFS*GASLVS Trigger: GGACACGAGGGAGGCGCCCAAACTGAATTCTACAAC...GTCAATAGCTTGTACAGCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | TTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTCTGAAGGGGAAGCGTTTCTCTTaGGGGACATCTTCAAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: FQMDTITRWCHQHYSFLKGKRFS*GTSSKG Trigger: CCCTTTTGAAGATGTCCCCAAAGAGAAACGCTTCCC...CTTCAGAAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | TCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGTGAATTACCAAACAGCCAGAGCTTGTGGGACCTCCAGGTaGCCTTTTGTTTCATCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SKFKASLVFRVNYQTARACGTSR*PFVSSV Trigger: GACCGATGAAACAAAAGGCAACCTGGAGGTCCCACA...AGCTCTGGCTGTTTGGTAATTCACTCTAAAGACCAGGCTGGCCTTGAACTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | TTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAACCAGCAGGGTGAAAGGTTCTCTTaGGACACAGTCACGCCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: FQDGLVSQSAVTGGRNQQGERFS*DTVTPS Trigger: ACTAGGCGTGACTGTGTCCAAAGAGAACCTTTCACC...CTGCTGGTTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | AGGGTTTGTCAACAAGCCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCCTCCAAACCATCTGTTaGCTGCCTCCCTTAAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: RVCQQADRSFGKSFKSTSLQTIC*LPPLNG Trigger: ACCGTTTAAGGGAGGCAGCAAACAGATGGTTTGGAG...GCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGGCTTGTTGACAAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTACGTCCTCATCCTGCTaGGACTGGCTGATGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: GCISSSLLFFDRSWLTPATSSSC*DWLMAL Trigger: GAGTGCCATCAGCCAGTCCAAGCAGGATGAGGACGT...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | CCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTACAAGCTATTGACCAGCCAGCCAGGAGTTaGCACATCCTTGGTTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: PTGPSANPLKVQAVQAIDQPARS*HILGYS Trigger: ACTGTAACCAAGGATGTGCAAACTCCTGGCTGGCTG...GTCAATAGCTTGTACAGCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | CATTTCCACGACATAATTACATCCGGTGAGCAGCACTGCTACGTGACACTAGCCCTTAGCAGGGCTGACTaGGACAAGTTATATCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HFHDIITSGEQHCYVTLALSRAD*DKLYPF Trigger: GAAAGGATATAACTTGTCCAAGTCAGCCCTGCTAAG...GGCTAGTGTCACGTAGCAGTGCTGCTCACCGGATGTAATTATGTCGTGGAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCAGAGGCAGGTGAATCTCTAAGTTCAAGGCCAGCCTGGTCTTTAGAGTGGTTGTGGTCAATGTaGTCATTCAGACAAACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QEAEAGESLSSRPAWSLEWLWSM*SFRQTN Trigger: GTTCGTTTGTCTGAATGACAACATTGACCACAACCA...CTCTAAAGACCAGGCTGGCCTTGAACTTAGAGATTCACCTGCCTCTGCTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | AGGGTTTGTCAACAAGCCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTATGGTTTTCCACTaGTTTGCAATGGACGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVCQQADRSFGKSFKSTSCMVFH*FAMDAW Trigger: CCACGCGTCCATTGCAAACAAGTGGAAAACCATACA...GCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGGCTTGTTGACAAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTAGTTGCAAATCCAAGTaGCTCAGCCTCACCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GCISSSLLFFDRSWLTPASCKSK*LSLTWA Trigger: GGCCCAGGTGAGGCTGAGCAACTTGGATTTGCAACT...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACGGTTCCGATACTCTCTaGGCAGCTCAAACTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKEETSQKLCWKALECKDGSDTL*AAQTGK Trigger: CTTCCCAGTTTGAGCTGCCAAGAGAGTATCGGAACC...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | TCAACGTCAATCTCGAGCTCTTCAGTAGTTGTTAGCGATTCAAGACCACTTGACGTCCAAAACTTCAGCTaGTCTCGATATGCCCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: STSISSSSVVVSDSRPLDVQNFS*SRYARH Trigger: ATGGCGGGCATATCGAGACAAGCTGAAGTTTTGGAC...GTCAAGTGGTCTTGAATCGCTAACAACTACTGAAGAGCTCGAGATTGACGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACTTTGGTTTCGCAACATaGAACATGTCGCTGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SKEETSQKLCWKALECKDFGFAT*NMSLAA Trigger: CGCTGCCAGCGACATGTTCAATGTTGCGAAACCAAA...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | AGGGTTTGTCAACAAGCCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCGGAGTTTGCACATCCTaGGTTACAGTAAGAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: RVCQQADRSFGKSFKSTSGVCTS*VTVRDG Trigger: ACCATCTCTTACTGTAACCAAGGATGTGCAAACTCC...GCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGGCTTGTTGACAAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | ATGGGTTTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTCATAGTGAGTCTGGTTaGGGAGAAGTGTTACTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: MGFQMDTITRWCHQHYSFHSESG*GEVLLY Trigger: ATAAAGTAACACTTCTCCCAAACCAGACTCACTATG...AAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAAACCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCTGGTTTTCCACTTGTTaGCAATGGACGCGTGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKCVPFWRNTTEIMTEDIWFSTC*QWTRGG Trigger: TCCGCCACGCGTCCATTGCAAACAAGTGGAAAACCA...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | ATGGGTTTCCAAATGGACACCATCACTCGCTGGTGCCATCAGCACTACTCATTTTTCGTCGTTGGCGTTTaGAAGAGTGAGGTTAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: MGFQMDTITRWCHQHYSFFVVGV*KSEVKI Trigger: TATTTTAACCTCACTCTTCAAAACGCCAACGACGAA...AAATGAGTAGTGCTGATGGCACCAGCGAGTGATGGTGTCCATTTGGAAACCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | TCAACGTCAATCTCGAGCTCTTCAGTAGTTGTTAGCGATTCAAGACCACTTGACGATTTTCACCTCCTCTaGGAATCTCCCTGTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: STSISSSSVVVSDSRPLDDFHLL*ESPCCI Trigger: AATGCAACAGGGAGATTCCAAGAGGAGGTGAAAATC...GTCAAGTGGTCTTGAATCGCTAACAACTACTGAAGAGCTCGAGATTGACGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | TCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAAAGACCTTGGAATCTCCCTGTaGCATTTACATCATGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKEETSQKLCWKALECKDLGISL*HLHHVS Trigger: GGAGACATGATGTAAATGCAACAGGGAGATTCCAAG...GTCTTTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | ACCCCTGCTCTGTATAAAGTAAGCAGGGTGGGCATTGGAAGGTATCATGGGTTTTTCATCGGTCCTAGCTaGAGGTTTTATTTTAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: TPALYKVSRVGIGRYHGFFIGPS*RFYFSI Trigger: GATACTAAAATAAAACCTCAAGCTAGGACCGATGAA...AAACCCATGATACCTTCCAATGCCCACCCTGCTTACTTTATACAGAGCAGGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | CACTTGCTTTCAAGATGGACTGGTTTCTCAGTCTGCAGTAACTGGGGGAAGAAATTGGTTCGTATCATCTaGAAAGCGATTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLLSRWTGFSVCSNWGKKLVRII*KAISSS Trigger: AGAGGAAGAAATCGCTTTCAAGATGATACGAACCAA...TTTCTTCCCCCAGTTACTGCAGACTGAGAAACCAGTCCATCTTGAAAGCAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCTCTGGACTAGCTTCTTaGTGTATCCTCCTCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKCVPFWRNTTEIMTEDISGLAS*CILLLG Trigger: TCCCAGGAGGAGGATACACAAAGAAGCTAGTCCAGA...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCGCTTCTCACTCTTCTTaGTCGGTTCGGTTGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKCVPFWRNTTEIMTEDIASHSS*SVRLCS Trigger: AGAACACAACCGAACCGACAAAGAAGAGTGAGAAGC...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | CGAAAATGTGTGCCATTTTGGAGGAATACTACTGAGATCATGACTGAAGATATCTTCTTCTTGGTCTGCTaGTTCAGCTCTTGGAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: RKCVPFWRNTTEIMTEDIFFLVC*FSSWKP Trigger: GGGTTTCCAAGAGCTGAACAAGCAGACCAAGAAGAA...GATATCTTCAGTCATGATCTCAGTAGTATTCCTCCAAAATGGCACACATTTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | TTTGTCAACAAGCCGACAGGTCCTTCGGCAAATCCTTTAAAAGTACAAGCTGTATTCATGAAAATGATCTaGTCCACAGTCACCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FVNKPTGPSANPLKVQAVFMKMI*STVTSI Trigger: GATGCTGGTGACTGTGGACAAGATCATTTTCATGAA...TACAGCTTGTACTTTTAAAGGATTTGCCGAAGGACCTGTCGGCTTGTTGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | TGGATCAAAGGAGGAGACAAGCCAGAAATTATGCTGGAAAGCTTTGGAATGCAATACTTCATGAAAGACTaGGGAAATATTGAGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WIKGGDKPEIMLESFGMQYFMKD*GNIEGL Trigger: CAGCCCCTCAATATTTCCCAAGTCTTTCATGAAGTA...TTGCATTCCAAAGCTTTCCAGCATAATTTCTGGCTTGTCTCCTCCTTTGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS-3UTR CAA 90 bp | GGATGTATCTCAAGTTCTTTACTGTTCTTTGACAGAAGTTGGTTAACCCCTGCTTTCAGGGAACATATCTaGGAGTTCTTGCATAACGAT | + |
|
Preference number: 5 (lower is better) Translates to: GCISSSLLFFDRSWLTPAFREHI*EFLHND Trigger: ATCGTTATGCAAGAACTCCAAGATATGTTCCCTGAA...AGCAGGGGTTAACCAACTTCTGTCAAAGAACAGTAAAGAACTTGAGATACATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020251.10 |
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| CDS TCA 72 bp | GAACCACCTCTCCGAACTGGAAAGCCGAGACGATGGTaGCAACGACGCCCACGAAGCAGACGTAGAGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: EPPLRTGKPRRW*QRRPRSRRRAH Trigger: ATGGGCTCTACGTCTGCTTCGTGGGCGTCGTTGTCACCATCGTCTCGGCTTTCCAGTTCGGAGAGGTGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020251.10 ENSMUST00000127615.8 ENSMUST00000130301.8 |
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| CDS TCA 72 bp | ACAGAGCCTCTCCGAACTGGAAAGCCGAGACGATGGTaGCAACGACGCCCACGAAGCAGACGTAGAGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TEPLRTGKPRRW*QRRPRSRRRAH Trigger: ATGGGCTCTACGTCTGCTTCGTGGGCGTCGTTGTCACCATCGTCTCGGCTTTCCAGTTCGGAGAGGCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| CDS CCA 72 bp | TGCCATTCACCCAGGTGTAAACCACGTCGATTGGCATaGGCAGACAGAGCCTCTCCGAACTGGAAAGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: CHSPRCKPRRLA*ADRASPNWKAE Trigger: CTCGGCTTTCCAGTTCGGAGAGGCTCTGTCTGCCCATGCCAATCGACGTGGTTTACACCTGGGTGAATGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151273.8 |
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| CDS GCA 72 bp | GGACCTGCTGTAGCTCCTTTAGCAGTTCAAGGTCAGTaGCATTCACCCAGGTGTAAACCACGTCGATTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GPAVAPLAVQGQ*HSPRCKPRRLA Trigger: TGCCAATCGACGTGGTTTACACCTGGGTGAATGGCACTGACCTTGAACTGCTAAAGGAGCTACAGCAGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020251.10 ENSMUST00000127615.8 ENSMUST00000130301.8 |
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| CDS CCA 72 bp | TGCCATTCACCCAGGTGTAAACCACGTCGATTGGCATaGGCAGACAGAGCCGATTCTGAAAGGATTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CHSPRCKPRRLA*ADRADSERISQ Trigger: CTGGGAAATCCTTTCAGAATCGGCTCTGTCTGCCCATGCCAATCGACGTGGTTTACACCTGGGTGAATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020251.10 ENSMUST00000127615.8 ENSMUST00000130301.8 |
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| CDS CAA 72 bp | GGTCAGTGCCATTCACCCAGGTGTAAACCACGTCGATaGGCATGGGCAGACAGAGCCGATTCTGAAAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: GQCHSPRCKPRR*AWADRADSERI Trigger: AATCCTTTCAGAATCGGCTCTGTCTGCCCATGCCAATCGACGTGGTTTACACCTGGGTGAATGGCACTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020251.10 ENSMUST00000127615.8 ENSMUST00000130301.8 |
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| CDS CAA 90 bp | GCAGTTCAAGGTCAGTGCCATTCACCCAGGTGTAAACCACGTCGATaGGCATGGGCAGACAGAGCCGATTCTGAAAGGATTTCCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AVQGQCHSPRCKPRR*AWADRADSERISQQ Trigger: TTGCTGGGAAATCCTTTCAGAATCGGCTCTGTCTGCCCATGCCAATCGACGTGGTTTACACCTGGGTGAATGGCACTGACCTTGAACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020251.10 ENSMUST00000127615.8 ENSMUST00000130301.8 |
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| CDS CCA 72 bp | GTCAGTGCCATTCACCCAGGTGTAAACCACGTCGATTaGCATGGGCAGACAGAGCCGATTCTGAAAGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: VSAIHPGVNHVD*HGQTEPILKGF Trigger: AAATCCTTTCAGAATCGGCTCTGTCTGCCCATGCCAATCGACGTGGTTTACACCTGGGTGAATGGCACTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020251.10 ENSMUST00000127615.8 ENSMUST00000130301.8 |
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