Pregenerated sensors for GNPDA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029209Ensembl transcript IDs: ENSMUST00000031117.13, ENSMUST00000120789.8, ENSMUST00000139632.8, ENSMUST00000153536.2, ENSMUST00000166298.8, ENSMUST00000173927.8
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCATCACACTCTGCCTGCAGATCTGCAGCGTTCCCATCGAGGATGTaGGCATTGTTCGGATCTATATCGATATGCTTAAAGAAGTTATTC | + |
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Preference number: 1 (lower is better) Translates to: ASHSACRSAAFPSRM*ALFGSISICLKKLF Trigger: GAATAACTTCTTTAAGCATATCGATATAGATCCGAACAATGCTCACATCCTCGATGGGAACGCTGCAGATCTGCAGGCAGAGTGTGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153536.2 |
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| 3UTR GCA 90 bp | TCTTCAGAAAATTGGCCACTGGACTTGGGAGAAAGGTGTGAGAAATaGGGATTCCCTGTTAAGAAGGCCTCAGAAAGCATTTTCCACCTA | + |
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Preference number: 1 (lower is better) Translates to: SSENWPLDLGERCEK*GFPVKKASESIFHL Trigger: TAGGTGGAAAATGCTTTCTGAGGCCTTCTTAACAGGGAATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATTTTCTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| 3UTR GCA 90 bp | TTCTTTGATTTTCTCCTCAAATGCATCACACTCTGCCTGCAGATCTaGAGCGTTCCCATCGAGGATGTGAGCATTGTTCGGATCTATATC | + |
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Preference number: 1 (lower is better) Translates to: FFDFLLKCITLCLQI*SVPIEDVSIVRIYI Trigger: GATATAGATCCGAACAATGCTCACATCCTCGATGGGAACGCTGCAGATCTGCAGGCAGAGTGTGATGCATTTGAGGAGAAAATCAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153536.2 |
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| 3UTR GCA 90 bp | CCAACAGACTGGACATCCAAGGTAAAGAACTCTCAAGCCAGGGATTaGCATGTAGTTTTTGTAGAAGATCATCTAGACCAGTGGTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: PTDWTSKVKNSQARD*HVVFVEDHLDQWFS Trigger: TGAGAACCACTGGTCTAGATGATCTTCTACAAAAACTACATGGCAATCCCTGGCTTGAGAGTTCTTTACCTTGGATGTCCAGTCTGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGAACAAGCAAAGAGCTCTAGGAAGTGCTCCCCTAAGAGAAACCCTGGGGTCTCAAGCCAGGGATTaGCATGTAGTTTTTGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: PGNKQRALGSAPLRETLGSQARD*HVVFVE Trigger: TTCTACAAAAACTACATGGCAATCCCTGGCTTGAGA...CCCCAGGGTTTCTCTTAGGGGAGCACTTCCTAGAGCTCTTTGCTTGTTCCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTCAGAAAATTGGCCACTGGACTTGGGAGAAAGGTGTGAGAAATGCGGATAAGAGCTCTAGGAAGTaGTCCCCTAAGAGAAACCCT | + |
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Preference number: 2 (lower is better) Translates to: FLQKIGHWTWEKGVRNADKSSRK*SPKRNP Trigger: AGGGTTTCTCTTAGGGGAGCACTTCCTAGAGCTCTT...ATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATTTTCTGAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAAGGTTTGTAATGAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCAGACAAGACCCAAGAGTaGAGATCTCTTAAAATGCAC | + |
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Preference number: 2 (lower is better) Translates to: VKVCNESRMTLERLGVSSDKTQE*RSLKMH Trigger: GTGCATTTTAAGAGATCTGCACTCTTGGGTCTTGTC...TGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTCATTACAAACCTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAAAGCATTTTCCACCTAGAAAAGAAGATCATATCCAGGGAACAAGCAAACGAGGCCCAACAGACTaGACATCCAAGGTAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LRKHFPPRKEDHIQGTSKRGPTD*TSKVKN Trigger: GTTCTTTACCTTGGATGTCCAGTCTGTTGGGCCTCG...TTTGCTTGTTCCCTGGATATGATCTTCTTTTCTAGGTGGAAAATGCTTTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| 3UTR CAA 90 bp | ATATCCATTCCAAAAGTGAAGGTTTGTAATGAGAGCAGGATGACATaGGAAAGGCTTGGAGTGTCTTCAAACAAGTCAGAGATTATGCCA | + |
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Preference number: 2 (lower is better) Translates to: ISIPKVKVCNESRMT*ERLGVSSNKSEIMP Trigger: TGGCATAATCTCTGACTTGTTTGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTCATTACAAACCTTCACTTTTGGAATGGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTTCCACTCTTGTGGTATTCGATTAGCTTTTTATAACATCCTAAAGGTGTACAGTACTAGAAAAGGATaGAGAAATATCACTGTCATC | + |
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Preference number: 2 (lower is better) Translates to: GFHSCGIRLAFYNILKVYSTRKG*RNITVI Trigger: GATGACAGTGATATTTCTGCATCCTTTTCTAGTACT...GTACACCTTTAGGATGTTATAAAAAGCTAATCGAATACCACAAGAGTGGAAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153536.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGGCATCCTCAAATCAGGGAAGGAAGAAGCATCCCATTGTGTGGAGCAACTGCTCTCAAGCCAGGGATaGCCATGTAGTTTTTGTAGA | + |
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Preference number: 3 (lower is better) Translates to: WGILKSGKEEASHCVEQLLSSQG*PCSFCR Trigger: TCTACAAAAACTACATGGCAATCCCTGGCTTGAGAG...CAGTTGCTCCACACAATGGGATGCTTCTTCCTTCCCTGATTTGAGGATGCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| 3UTR TCA 72 bp | TCTGCCTGCAGATCTGCAGCGTTCCCATCGAGGATGTaGGCATTGTTCGGATCTATATCGATATGCTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SACRSAAFPSRM*ALFGSISICLK Trigger: CTTTAAGCATATCGATATAGATCCGAACAATGCTCACATCCTCGATGGGAACGCTGCAGATCTGCAGGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153536.2 |
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| 3UTR GCA 72 bp | AATTGGCCACTGGACTTGGGAGAAAGGTGTGAGAAATaGGGATTCCCTGTTAAGAAGGCCTCAGAAAGCATT | + |
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Preference number: 3 (lower is better) Translates to: NWPLDLGERCEK*GFPVKKASESI Trigger: AATGCTTTCTGAGGCCTTCTTAACAGGGAATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| 3UTR GCA 72 bp | CCACTGACAAGACCCAAGAGTGCAGATCTCTTAAAATaGACACATTTCACTGCTATACTGTTTATAGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: PLTRPKSADLLK*THFTAILFIGS Trigger: GCTACCTATAAACAGTATAGCAGTGAAATGTGTGCATTTTAAGAGATCTGCACTCTTGGGTCTTGTCAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR CCA 90 bp | GGGAAGGAAGAAGCATCCCATTGTGTGGAGCAACTGAAAATGAGAAGGCTGAGCGATTGCAGATGTACTTaGCTGCCCATTCGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GKEEASHCVEQLKMRRLSDCRCT*LPIRWP Trigger: TGGCCAGCGAATGGGCAGCCAAGTACATCTGCAATC...GCTCAGCCTTCTCATTTTCAGTTGCTCCACACAATGGGATGCTTCTTCCTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR TCA 90 bp | AGAGAAACCCTGGGGCATCCTCAAATCAGGGAAGGAAGAAGCATCCCATTGTGTGACACCGTCCACATGTaGTTGACTCCTTCTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: RETLGHPQIREGRSIPLCDTVHM*LTPSSM Trigger: CATGGAAGAAGGAGTCAATCACATGTGGACGGTGTC...ACACAATGGGATGCTTCTTCCTTCCCTGATTTGAGGATGCCCCAGGGTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR GCA 90 bp | TGGGGCATCCTCAAATCAGGGAAGGAAGAAGCATCCCATTGTGTGGAGCAACTGAAATGCATCACACTCTaGCTGCAGATCTGCAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: WGILKSGKEEASHCVEQLKCITL*LQICSV Trigger: AACGCTGCAGATCTGCAGGCAGAGTGTGATGCATTT...CAGTTGCTCCACACAATGGGATGCTTCTTCCTTCCCTGATTTGAGGATGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR TCA 90 bp | TCAGAAAATTGGCCACTGGACTTGGGAGAAAGGTGTGAGAAATGCGGATTCCCTCCGTCCACATGTGATTaGCTCCTTCTTCCATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SENWPLDLGERCEKCGFPPSTCD*LLLPWL Trigger: AAGCCATGGAAGAAGGAGTCAATCACATGTGGACGG...AGGGAATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATTTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR GCA 90 bp | TTTCTTCAGAAAATTGGCCACTGGACTTGGGAGAAAGGTGTGAGAAATGCGGATGCATCACACTCTGCCTaGAGATCTGCAGCGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: FLQKIGHWTWEKGVRNADASHSA*RSAAFP Trigger: TGGGAACGCTGCAGATCTGCAGGCAGAGTGTGATGC...ATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATTTTCTGAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR CCA 90 bp | ATCTGCAGCGTTCCCATCGAGGATGTGAGCATTGTTCGGATCTATATCGATATGGATTGCAGATGTACTTaGCTGCCCATTCGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ICSVPIEDVSIVRIYIDMDCRCT*LPIRWP Trigger: TGGCCAGCGAATGGGCAGCCAAGTACATCTGCAATC...CATATCGATATAGATCCGAACAATGCTCACATCCTCGATGGGAACGCTGCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153536.2 |
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| CDS-3UTR TCA 90 bp | AGAGAAACCCTGGGGCATCCTCAAATCAGGGAAGGAAGAAGCATCCCATTGTGTTGGATCCTGGTTCATTaGAAGCAATATGGCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: RETLGHPQIREGRSIPLCWILVH*KQYGHL Trigger: CAGATGGCCATATTGCTTTCAATGAACCAGGATCCA...ACACAATGGGATGCTTCTTCCTTCCCTGATTTGAGGATGCCCCAGGGTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR GCA 90 bp | AAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTCCTGCATCACACTCTGCCTaGAGATCTGCAGCGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KLKFYQYGKVLRSTTGSPASHSA*RSAAFP Trigger: TGGGAACGCTGCAGATCTGCAGGCAGAGTGTGATGC...AGGAGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CCA 90 bp | GAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCAAACAAGTCAGAGATTGATTGCAGATGTACTTaGCTGCCCATTCGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ESRMTLERLGVSSNKSEIDCRCT*LPIRWP Trigger: TGGCCAGCGAATGGGCAGCCAAGTACATCTGCAATC...AATCTCTGACTTGTTTGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR TCA 90 bp | TGGGGCATCCTCAAATCAGGGAAGGAAGAAGCATCCCATTGTGTGGAGCAACTGTTCCTCCAGCTTCTTTaGTTTTCTCCTCAAATGCAT | + |
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Preference number: 4 (lower is better) Translates to: WGILKSGKEEASHCVEQLFLQLL*FSPQMH Trigger: ATGCATTTGAGGAGAAAATCAAAGAAGCTGGAGGAA...CAGTTGCTCCACACAATGGGATGCTTCTTCCTTCCCTGATTTGAGGATGCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR TCA 90 bp | GTGAAGGTTTGTAATGAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCAGACACCGTCCACATGTaGTTGACTCCTTCTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: VKVCNESRMTLERLGVSSDTVHM*LTPSSM Trigger: CATGGAAGAAGGAGTCAATCACATGTGGACGGTGTC...TGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTCATTACAAACCTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR GCA 90 bp | CATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTGCATCACACTCTGCCTaGAGATCTGCAGCGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: HKLKFYQYGKVLRSTTGSASHSA*RSAAFP Trigger: TGGGAACGCTGCAGATCTGCAGGCAGAGTGTGATGC...AGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR GCA 90 bp | TTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGGCATCACACTCTGCCTaGAGATCTGCAGCGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LHKLKFYQYGKVLRSTTGASHSA*RSAAFP Trigger: TGGGAACGCTGCAGATCTGCAGGCAGAGTGTGATGC...CCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR GCA 90 bp | TCAGAAAATTGGCCACTGGACTTGGGAGAAAGGTGTGAGAAATGCGGATTCCCTGATTTTCTCCTCAAATaGATCACACTCTGCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SENWPLDLGERCEKCGFPDFLLK*ITLCLQ Trigger: CTGCAGGCAGAGTGTGATGCATTTGAGGAGAAAATC...AGGGAATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATTTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR CCA 90 bp | AGAGAAACCCTGGGGCATCCTCAAATCAGGGAAGGAAGAAGCATCCCATTGTGTTACAAAAATAGTGCGTaGATGTTGCTGGAAAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: RETLGHPQIREGRSIPLCYKNSA*MLLESG Trigger: TCCGCTTTCCAGCAACATCCACGCACTATTTTTGTA...ACACAATGGGATGCTTCTTCCTTCCCTGATTTGAGGATGCCCCAGGGTTTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR TCA 90 bp | AAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTCCTGACACCGTCCACATGTaGTTGACTCCTTCTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: KLKFYQYGKVLRSTTGSPDTVHM*LTPSSM Trigger: CATGGAAGAAGGAGTCAATCACATGTGGACGGTGTC...AGGAGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR GCA 90 bp | GAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCAAACAAGTCAGAGATTAAATGCATCACACTCTaGCTGCAGATCTGCAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: ESRMTLERLGVSSNKSEIKCITL*LQICSV Trigger: AACGCTGCAGATCTGCAGGCAGAGTGTGATGCATTT...AATCTCTGACTTGTTTGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR CCA 90 bp | TTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGGATTGCAGATGTACTTaGCTGCCCATTCGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LHKLKFYQYGKVLRSTTGDCRCT*LPIRWP Trigger: TGGCCAGCGAATGGGCAGCCAAGTACATCTGCAATC...CCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CCA 90 bp | CATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTGATTGCAGATGTACTTaGCTGCCCATTCGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HKLKFYQYGKVLRSTTGSDCRCT*LPIRWP Trigger: TGGCCAGCGAATGGGCAGCCAAGTACATCTGCAATC...AGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR TCA 90 bp | TTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGCCGTCCACATGTGATTaGCTCCTTCTTCCATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LHKLKFYQYGKVLRSTTGPSTCD*LLLPWL Trigger: AAGCCATGGAAGAAGGAGTCAATCACATGTGGACGG...CCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR TCA 90 bp | TTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGGACACCGTCCACATGTaGTTGACTCCTTCTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: LHKLKFYQYGKVLRSTTGDTVHM*LTPSSM Trigger: CATGGAAGAAGGAGTCAATCACATGTGGACGGTGTC...CCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR GCA 90 bp | GAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCAAACAAGTCAGAGATTGATTTTCTCCTCAAATaGATCACACTCTGCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ESRMTLERLGVSSNKSEIDFLLK*ITLCLQ Trigger: CTGCAGGCAGAGTGTGATGCATTTGAGGAGAAAATC...AATCTCTGACTTGTTTGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAAATTGGCCACTGGACTTGGGAGAAAGGTGTGAGAAATGCGGATTCCCTCAACAGTCAGAGCCATaGTTGGCACTTTTGATAAAT | + |
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Preference number: 4 (lower is better) Translates to: SENWPLDLGERCEKCGFPQQSEP*LALLIN Trigger: ATTTATCAAAAGTGCCAACCATGGCTCTGACTGTTG...AGGGAATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATTTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| 3UTR CAA 72 bp | AGGGATTTAGTTTCTTCAGAAAATTGGCCACTGGACTaGGGAGAAAGGTGTGAGAAATGCGGATTCCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: RDLVSSENWPLD*GERCEKCGFPV Trigger: AACAGGGAATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATTTTCTGAAGAAACTAAATCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR TCA 90 bp | TTCAAACAAGTCAGAGATTATGCCACTGACAAGACCCAAGAGTGCAGATCTCTTTGGATCCTGGTTCATTaGAAGCAATATGGCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: FKQVRDYATDKTQECRSLWILVH*KQYGHL Trigger: CAGATGGCCATATTGCTTTCAATGAACCAGGATCCA...AAGAGATCTGCACTCTTGGGTCTTGTCAGTGGCATAATCTCTGACTTGTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR TCA 90 bp | AAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTCCTTGGATCCTGGTTCATTaGAAGCAATATGGCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: KLKFYQYGKVLRSTTGSPWILVH*KQYGHL Trigger: CAGATGGCCATATTGCTTTCAATGAACCAGGATCCA...AGGAGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR GCA 90 bp | GTTATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCGCATCACACTCTGCCTaGAGATCTGCAGCGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VIILHKLKFYQYGKVLRSASHSA*RSAAFP Trigger: TGGGAACGCTGCAGATCTGCAGGCAGAGTGTGATGC...GCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR GCA 90 bp | AAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTCCTGATTTTCTCCTCAAATaGATCACACTCTGCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: KLKFYQYGKVLRSTTGSPDFLLK*ITLCLQ Trigger: CTGCAGGCAGAGTGTGATGCATTTGAGGAGAAAATC...AGGAGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| 3UTR CAA 72 bp | CCAAAAGTGAAGGTTTGTAATGAGAGCAGGATGACATaGGAAAGGCTTGGAGTGTCTTCAAACAAGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PKVKVCNESRMT*ERLGVSSNKSE Trigger: CTCTGACTTGTTTGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTCATTACAAACCTTCACTTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR TCA 90 bp | GAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCAAACAAGTCAGAGATTTTCCTCCAGCTTCTTTaGTTTTCTCCTCAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESRMTLERLGVSSNKSEIFLQLL*FSPQMH Trigger: ATGCATTTGAGGAGAAAATCAAAGAAGCTGGAGGAA...AATCTCTGACTTGTTTGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
||
| CDS-3UTR TCA 90 bp | CATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTTGGATCCTGGTTCATTaGAAGCAATATGGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKLKFYQYGKVLRSTTGSWILVH*KQYGHL Trigger: CAGATGGCCATATTGCTTTCAATGAACCAGGATCCA...AGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTCAGAAAATTGGCCACTGGACTTGGGAGAAAGGTGTGAGAAATGCGGATTCATTGAAAGCAATATaGCCATCTGGACCTATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLQKIGHWTWEKGVRNADSLKAI*PSGPIP Trigger: AGGAATAGGTCCAGATGGCCATATTGCTTTCAATGA...ATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATTTTCTGAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
||
| CDS-3UTR CCA 90 bp | GTGAAGGTTTGTAATGAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCACAACAGTCAGAGCCATaGTTGGCACTTTTGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VKVCNESRMTLERLGVSSQQSEP*LALLIN Trigger: ATTTATCAAAAGTGCCAACCATGGCTCTGACTGTTG...TGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTCATTACAAACCTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAACAAGTCAGAGATTATGCCACTGACAAGACCCAAGAGTGCAGATCTCTTTACAAAAATAGTGCGTaGATGTTGCTGGAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FKQVRDYATDKTQECRSLYKNSA*MLLESG Trigger: TCCGCTTTCCAGCAACATCCACGCACTATTTTTGTA...AAGAGATCTGCACTCTTGGGTCTTGTCAGTGGCATAATCTCTGACTTGTTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAACAAGTCAGAGATTATGCCACTGACAAGACCCAAGAGTGCAGATCTCTTTTCCTCCAGCTTCTTTaGTTTTCTCCTCAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FKQVRDYATDKTQECRSLFLQLL*FSPQMH Trigger: ATGCATTTGAGGAGAAAATCAAAGAAGCTGGAGGAA...AAGAGATCTGCACTCTTGGGTCTTGTCAGTGGCATAATCTCTGACTTGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
||
| CDS-3UTR TCA 90 bp | ATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACACCGTCCACATGTGATTaGCTCCTTCTTCCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IILHKLKFYQYGKVLRSTPSTCD*LLLPWL Trigger: AAGCCATGGAAGAAGGAGTCAATCACATGTGGACGG...TGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR TCA 90 bp | ATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTCCGTCCACATGTGATTaGCTCCTTCTTCCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILHKLKFYQYGKVLRSTTPSTCD*LLLPWL Trigger: AAGCCATGGAAGAAGGAGTCAATCACATGTGGACGG...AGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR TCA 90 bp | ATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAGACACCGTCCACATGTaGTTGACTCCTTCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IILHKLKFYQYGKVLRSTDTVHM*LTPSSM Trigger: CATGGAAGAAGGAGTCAATCACATGTGGACGGTGTC...TGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTCCTCAACAGTCAGAGCCATaGTTGGCACTTTTGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLKFYQYGKVLRSTTGSPQQSEP*LALLIN Trigger: ATTTATCAAAAGTGCCAACCATGGCTCTGACTGTTG...AGGAGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CCA 90 bp | CATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTTACAAAAATAGTGCGTaGATGTTGCTGGAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HKLKFYQYGKVLRSTTGSYKNSA*MLLESG Trigger: TCCGCTTTCCAGCAACATCCACGCACTATTTTTGTA...AGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR GCA 90 bp | AAGTACTACATAAGAAGGTGCATAGAAGCATGCACTTACACATACTTTCTGAAAAAATGCATCACACTCTaGCTGCAGATCTGCAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KYYIRRCIEACTYTYFLKKCITL*LQICSV Trigger: AACGCTGCAGATCTGCAGGCAGAGTGTGATGCATTT...TTTCAGAAAGTATGTGTAAGTGCATGCTTCTATGCACCTTCTTATGTAGTACTT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
||
| CDS-3UTR GCA 90 bp | GTTATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCAAATGCATCACACTCTaGCTGCAGATCTGCAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VIILHKLKFYQYGKVLRSKCITL*LQICSV Trigger: AACGCTGCAGATCTGCAGGCAGAGTGTGATGCATTT...GCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR GCA 90 bp | ATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAAAATGCATCACACTCTaGCTGCAGATCTGCAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: IILHKLKFYQYGKVLRSTKCITL*LQICSV Trigger: AACGCTGCAGATCTGCAGGCAGAGTGTGATGCATTT...TGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR GCA 90 bp | ATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAGATTTTCTCCTCAAATaGATCACACTCTGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IILHKLKFYQYGKVLRSTDFLLK*ITLCLQ Trigger: CTGCAGGCAGAGTGTGATGCATTTGAGGAGAAAATC...TGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGCCGTCTGTCTTGAGCATGACATAAATCGTGGTCTTTTTCTTTATAAATACAAAAATAGTGCGTaGATGTTGCTGGAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSAVCLEHDINRGLFLYKYKNSA*MLLESG Trigger: TCCGCTTTCCAGCAACATCCACGCACTATTTTTGTA...TTTATAAAGAAAAAGACCACGATTTATGTCATGCTCAAGACAGACGGCAGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000139632.8 |
||
| CDS-3UTR CCA 90 bp | ATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTTACAAAAATAGTGCGTaGATGTTGCTGGAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILHKLKFYQYGKVLRSTTYKNSA*MLLESG Trigger: TCCGCTTTCCAGCAACATCCACGCACTATTTTTGTA...AGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR TCA 90 bp | ATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTTTCCTCCAGCTTCTTTaGTTTTCTCCTCAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILHKLKFYQYGKVLRSTTFLQLL*FSPQMH Trigger: ATGCATTTGAGGAGAAAATCAAAGAAGCTGGAGGAA...AGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR TCA 90 bp | ATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACATTCCTCCAGCTTCTTTaGTTTTCTCCTCAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IILHKLKFYQYGKVLRSTFLQLL*FSPQMH Trigger: ATGCATTTGAGGAGAAAATCAAAGAAGCTGGAGGAA...TGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCTCATTGAAAGCAATATaGCCATCTGGACCTATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VIILHKLKFYQYGKVLRSSLKAI*PSGPIP Trigger: AGGAATAGGTCCAGATGGCCATATTGCTTTCAATGA...GCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 |
||
| CDS-3UTR CCA 90 bp | ATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTCAACAGTCAGAGCCATaGTTGGCACTTTTGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILHKLKFYQYGKVLRSTTQQSEP*LALLIN Trigger: ATTTATCAAAAGTGCCAACCATGGCTCTGACTGTTG...AGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGATCTGCAGCGTTCCCATCGAGGATGTGAGCATTGTTCGGATCTATATCCGATTGCAGATGTACTaGGCTGCCCATTCGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQICSVPIEDVSIVRIYIRLQMY*AAHSLA Trigger: GGCCAGCGAATGGGCAGCCAAGTACATCTGCAATCG...GATATAGATCCGAACAATGCTCACATCCTCGATGGGAACGCTGCAGATCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153536.2 |
||
| CDS TCA 90 bp | AAAATAGTGCGTGGATGTTGCTGGAAAGCGGACACCGTCCACATGTaGTTGACTCCTTCTTCCATGGCTTTGTACAGCGCGAAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KIVRGCCWKADTVHM*LTPSSMALYSAKAL Trigger: CAAGGCCTTCGCGCTGTACAAAGCCATGGAAGAAGGAGTCAATCACATGTGGACGGTGTCCGCTTTCCAGCAACATCCACGCACTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031117.13 ENSMUST00000120789.8 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CAA 90 bp | ATAGGGAAGGGATTTAGTTTCTTCAGAAAATTGGCCACTGGACTTGGGAGAAAGCGATTGCAGATGTACTaGGCTGCCCATTCGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IGKGFSFFRKLATGLGRKRLQMY*AAHSLA Trigger: GGCCAGCGAATGGGCAGCCAAGTACATCTGCAATCG...CTTTCTCCCAAGTCCAGTGGCCAATTTTCTGAAGAAACTAAATCCCTTCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
||
| CDS-3UTR CAA 90 bp | AACCCTGGGGCATCCTCAAATCAGGGAAGGAAGAAGCATCCCATTGTGTGGAGCCTGTCCTGTCCGGGTTaGAATTTTATGATACGATTG | + |
|
Preference number: 5 (lower is better) Translates to: NPGASSNQGRKKHPIVWSLSCPG*NFMIRL Trigger: CAATCGTATCATAAAATTCAAACCCGGACAGGACAG...GCTCCACACAATGGGATGCTTCTTCCTTCCCTGATTTGAGGATGCCCCAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGAACAAGCAAAGAGCTCTAGGAAGTGCTCCCCTAAGAGAAACCCTGGGGATTCCTCCAGCTTCTTaGATTTTCTCCTCAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGNKQRALGSAPLRETLGIPPAS*IFSSNA Trigger: TGCATTTGAGGAGAAAATCAAAGAAGCTGGAGGAAT...CCCCAGGGTTTCTCTTAGGGGAGCACTTCCTAGAGCTCTTTGCTTGTTCCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
||
| CDS-3UTR CAA 90 bp | TTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGCGATTGCAGATGTACTaGGCTGCCCATTCGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHKLKFYQYGKVLRSTTGRLQMY*AAHSLA Trigger: GGCCAGCGAATGGGCAGCCAAGTACATCTGCAATCG...CCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGAAGAAGCATCCCATTGTGTGGAGCAACTGAAAATGAGAAGGCTGAGCCCAAAATGGTGTCCATaGCTAGCGTCTTTAATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GKEEASHCVEQLKMRRLSPKWCP*LASLIS Trigger: CGAGATTAAAGACGCTAGCAATGGACACCATTTTGG...GCTCAGCCTTCTCATTTTCAGTTGCTCCACACAATGGGATGCTTCTTCCTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
||
| CDS-3UTR CAA 90 bp | CACTGGACTTGGGAGAAAGGTGTGAGAAATGCGGATTCCCTGTTAAGAAGGCCTCAGTCAGAGCCATGGTaGGCACTTTTGATAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: HWTWEKGVRNADSLLRRPQSEPW*ALLINL Trigger: GAGATTTATCAAAAGTGCCAACCATGGCTCTGACTG...AGGCCTTCTTAACAGGGAATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCAAACAAGTCAGAGATTAATAGTGCGTGGATGTaGCTGGAAAGCGGACACCGT | + |
|
Preference number: 5 (lower is better) Translates to: ESRMTLERLGVSSNKSEINSAWM*LESGHR Trigger: ACGGTGTCCGCTTTCCAGCAACATCCACGCACTATT...AATCTCTGACTTGTTTGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTTCAGAAAATTGGCCACTGGACTTGGGAGAAAGGTGTGAGAAATGCGGATAATAGTGCGTGGATGTaGCTGGAAAGCGGACACCGT | + |
|
Preference number: 5 (lower is better) Translates to: FLQKIGHWTWEKGVRNADNSAWM*LESGHR Trigger: ACGGTGTCCGCTTTCCAGCAACATCCACGCACTATT...ATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATTTTCTGAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
||
| CDS-3UTR CAA 90 bp | CATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTAATAGTGCGTGGATGTaGCTGGAAAGCGGACACCGT | + |
|
Preference number: 5 (lower is better) Translates to: HKLKFYQYGKVLRSTTGSNSAWM*LESGHR Trigger: ACGGTGTCCGCTTTCCAGCAACATCCACGCACTATT...AGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CAA 90 bp | AAGTACTACATAAGAAGGTGCATAGAAGCATGCACTTACACATACTTTCTGAAACGATTGCAGATGTACTaGGCTGCCCATTCGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KYYIRRCIEACTYTYFLKRLQMY*AAHSLA Trigger: GGCCAGCGAATGGGCAGCCAAGTACATCTGCAATCG...TTTCAGAAAGTATGTGTAAGTGCATGCTTCTATGCACCTTCTTATGTAGTACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
||
| CDS-3UTR CAA 90 bp | GTTATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCCGATTGCAGATGTACTaGGCTGCCCATTCGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VIILHKLKFYQYGKVLRSRLQMY*AAHSLA Trigger: GGCCAGCGAATGGGCAGCCAAGTACATCTGCAATCG...GCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CAA 90 bp | CACTGGACTTGGGAGAAAGGTGTGAGAAATGCGGATTCCCTGTTAAGAAGGCCTCCATGGTTGGCACTTTaGATAAATCTCCATCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HWTWEKGVRNADSLLRRPPWLAL*INLHQN Trigger: ATTTTGATGGAGATTTATCAAAAGTGCCAACCATGG...AGGCCTTCTTAACAGGGAATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
||
| CDS-3UTR CAA 90 bp | GTGAAGGTTTGTAATGAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCACAGTCAGAGCCATGGTaGGCACTTTTGATAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VKVCNESRMTLERLGVSSQSEPW*ALLINL Trigger: GAGATTTATCAAAAGTGCCAACCATGGCTCTGACTG...TGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTCATTACAAACCTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
||
| CDS GCA 90 bp | CTGTCCGGGTTTGAATTTTATGATACGATTGCAGATGTACTTGGCTaGCCATTCGCTGGCCAAGTCATAGTTATCAAGAATTACAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSGFEFYDTIADVLG*PFAGQVIVIKNYKP Trigger: AGGCTTGTAATTCTTGATAACTATGACTTGGCCAGCGAATGGGCAGCCAAGTACATCTGCAATCGTATCATAAAATTCAAACCCGGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031117.13 ENSMUST00000120789.8 ENSMUST00000139632.8 ENSMUST00000153536.2 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCAAACAAGTCAGAGATTCTGTCCTGTCCGGGTTaGAATTTTATGATACGATTG | + |
|
Preference number: 5 (lower is better) Translates to: ESRMTLERLGVSSNKSEILSCPG*NFMIRL Trigger: CAATCGTATCATAAAATTCAAACCCGGACAGGACAG...AATCTCTGACTTGTTTGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTCCTCCAAAATGGTGTCCATaGCTAGCGTCTTTAATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KLKFYQYGKVLRSTTGSPPKWCP*LASLIS Trigger: CGAGATTAAAGACGCTAGCAATGGACACCATTTTGG...AGGAGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTCCTCTGTCCTGTCCGGGTTaGAATTTTATGATACGATTG | + |
|
Preference number: 5 (lower is better) Translates to: KLKFYQYGKVLRSTTGSPLSCPG*NFMIRL Trigger: CAATCGTATCATAAAATTCAAACCCGGACAGGACAG...AGGAGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CAA 90 bp | CATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTCCAAAATGGTGTCCATaGCTAGCGTCTTTAATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HKLKFYQYGKVLRSTTGSPKWCP*LASLIS Trigger: CGAGATTAAAGACGCTAGCAATGGACACCATTTTGG...AGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
||
| CDS-3UTR CAA 90 bp | AAGTACTACATAAGAAGGTGCATAGAAGCATGCACTTACACATACTTTCTGAAAAATAGTGCGTGGATGTaGCTGGAAAGCGGACACCGT | + |
|
Preference number: 5 (lower is better) Translates to: KYYIRRCIEACTYTYFLKNSAWM*LESGHR Trigger: ACGGTGTCCGCTTTCCAGCAACATCCACGCACTATT...TTTCAGAAAGTATGTGTAAGTGCATGCTTCTATGCACCTTCTTATGTAGTACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR CAA 90 bp | ATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTAATAGTGCGTGGATGTaGCTGGAAAGCGGACACCGT | + |
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Preference number: 5 (lower is better) Translates to: ILHKLKFYQYGKVLRSTTNSAWM*LESGHR Trigger: ACGGTGTCCGCTTTCCAGCAACATCCACGCACTATT...AGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | CATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTCTGTCCTGTCCGGGTTaGAATTTTATGATACGATTG | + |
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Preference number: 5 (lower is better) Translates to: HKLKFYQYGKVLRSTTGSLSCPG*NFMIRL Trigger: CAATCGTATCATAAAATTCAAACCCGGACAGGACAG...AGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | GTTTGTAATGAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCAAACAAGATTCCTCCAGCTTCTTaGATTTTCTCCTCAAATGCA | + |
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Preference number: 5 (lower is better) Translates to: VCNESRMTLERLGVSSNKIPPAS*IFSSNA Trigger: TGCATTTGAGGAGAAAATCAAAGAAGCTGGAGGAAT...CTTGTTTGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTCATTACAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR CAA 90 bp | TTTCTTCAGAAAATTGGCCACTGGACTTGGGAGAAAGGTGTGAGAAATGCGGATTCTTTAATCTCGTTCTaGATACTAAACTGGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: FLQKIGHWTWEKGVRNADSLISF*ILNWIL Trigger: CAGGATCCAGTTTAGTATCAAGAACGAGATTAAAGA...ATCCGCATTTCTCACACCTTTCTCCCAAGTCCAGTGGCCAATTTTCTGAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120789.8 |
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| CDS-3UTR CAA 90 bp | GAGAGCAGGATGACATTGGAAAGGCTTGGAGTGTCTTCAAACAAGTCAGAGATTCCATGGTTGGCACTTTaGATAAATCTCCATCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: ESRMTLERLGVSSNKSEIPWLAL*INLHQN Trigger: ATTTTGATGGAGATTTATCAAAAGTGCCAACCATGG...AATCTCTGACTTGTTTGAAGACACTCCAAGCCTTTCCAATGTCATCCTGCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR CAA 90 bp | TTCAAACAAGTCAGAGATTATGCCACTGACAAGACCCAAGAGTGCAGATCTCTTTCTTTAATCTCGTTCTaGATACTAAACTGGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: FKQVRDYATDKTQECRSLSLISF*ILNWIL Trigger: CAGGATCCAGTTTAGTATCAAGAACGAGATTAAAGA...AAGAGATCTGCACTCTTGGGTCTTGTCAGTGGCATAATCTCTGACTTGTTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR CAA 90 bp | TTCAAACAAGTCAGAGATTATGCCACTGACAAGACCCAAGAGTGCAGATCTCTTCCATGGTTGGCACTTTaGATAAATCTCCATCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: FKQVRDYATDKTQECRSLPWLAL*INLHQN Trigger: ATTTTGATGGAGATTTATCAAAAGTGCCAACCATGG...AAGAGATCTGCACTCTTGGGTCTTGTCAGTGGCATAATCTCTGACTTGTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR CAA 90 bp | AAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTCCTCCATGGTTGGCACTTTaGATAAATCTCCATCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: KLKFYQYGKVLRSTTGSPPWLAL*INLHQN Trigger: ATTTTGATGGAGATTTATCAAAAGTGCCAACCATGG...AGGAGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | GGTTTCCACTCTTGTGGTATTCGATTAGCTTTTTATAACATCCTAAAGGTGTACCTGTCCTGTCCGGGTTaGAATTTTATGATACGATTG | + |
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Preference number: 5 (lower is better) Translates to: GFHSCGIRLAFYNILKVYLSCPG*NFMIRL Trigger: CAATCGTATCATAAAATTCAAACCCGGACAGGACAG...GTACACCTTTAGGATGTTATAAAAAGCTAATCGAATACCACAAGAGTGGAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153536.2 |
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| CDS-3UTR CAA 90 bp | TTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTGGGTCTTTAATCTCGTTCTaGATACTAAACTGGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: LHKLKFYQYGKVLRSTTGSLISF*ILNWIL Trigger: CAGGATCCAGTTTAGTATCAAGAACGAGATTAAAGA...CCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | ATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACACCAAAATGGTGTCCATaGCTAGCGTCTTTAATCTCG | + |
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Preference number: 5 (lower is better) Translates to: IILHKLKFYQYGKVLRSTPKWCP*LASLIS Trigger: CGAGATTAAAGACGCTAGCAATGGACACCATTTTGG...TGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | GTTATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCCAGTCAGAGCCATGGTaGGCACTTTTGATAAATCTC | + |
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Preference number: 5 (lower is better) Translates to: VIILHKLKFYQYGKVLRSQSEPW*ALLINL Trigger: GAGATTTATCAAAAGTGCCAACCATGGCTCTGACTG...GCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | ATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAACTCAGTCAGAGCCATGGTaGGCACTTTTGATAAATCTC | + |
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Preference number: 5 (lower is better) Translates to: ILHKLKFYQYGKVLRSTTQSEPW*ALLINL Trigger: GAGATTTATCAAAAGTGCCAACCATGGCTCTGACTG...AGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | ATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACAATTCCTCCAGCTTCTTaGATTTTCTCCTCAAATGCA | + |
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Preference number: 5 (lower is better) Translates to: IILHKLKFYQYGKVLRSTIPPAS*IFSSNA Trigger: TGCATTTGAGGAGAAAATCAAAGAAGCTGGAGGAAT...TGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | AAGTACTACATAAGAAGGTGCATAGAAGCATGCACTTACACATACTTTCTGAAAATTCCTCCAGCTTCTTaGATTTTCTCCTCAAATGCA | + |
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Preference number: 5 (lower is better) Translates to: KYYIRRCIEACTYTYFLKIPPAS*IFSSNA Trigger: TGCATTTGAGGAGAAAATCAAAGAAGCTGGAGGAAT...TTTCAGAAAGTATGTGTAAGTGCATGCTTCTATGCACCTTCTTATGTAGTACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031117.13 ENSMUST00000166298.8 |
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| CDS-3UTR CAA 90 bp | GTTATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCATTCCTCCAGCTTCTTaGATTTTCTCCTCAAATGCA | + |
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Preference number: 5 (lower is better) Translates to: VIILHKLKFYQYGKVLRSIPPAS*IFSSNA Trigger: TGCATTTGAGGAGAAAATCAAAGAAGCTGGAGGAAT...GCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | GTTATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCTCTTTAATCTCGTTCTaGATACTAAACTGGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: VIILHKLKFYQYGKVLRSSLISF*ILNWIL Trigger: CAGGATCCAGTTTAGTATCAAGAACGAGATTAAAGA...GCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGATAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | ATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACATCTTTAATCTCGTTCTaGATACTAAACTGGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: IILHKLKFYQYGKVLRSTSLISF*ILNWIL Trigger: CAGGATCCAGTTTAGTATCAAGAACGAGATTAAAGA...TGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS-3UTR CAA 90 bp | ATCATATTGCATAAGCTGAAATTTTATCAGTATGGAAAGGTTCTTCGGAGCACACCATGGTTGGCACTTTaGATAAATCTCCATCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: IILHKLKFYQYGKVLRSTPWLAL*INLHQN Trigger: ATTTTGATGGAGATTTATCAAAAGTGCCAACCATGG...TGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGCTTATGCAATATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031117.13 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS CAA 90 bp | CTCCCTGTTGGTAAGCCCAGGGAAAAGTACCTGTCCTGTCCGGGTTaGAATTTTATGATACGATTGCAGATGTACTTGGCTGCCCATTCG | + |
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Preference number: 6 (lower is better) Translates to: LPVGKPREKYLSCPG*NFMIRLQMYLAAHS Trigger: CGAATGGGCAGCCAAGTACATCTGCAATCGTATCATAAAATTCAAACCCGGACAGGACAGGTACTTTTCCCTGGGCTTACCAACAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031117.13 ENSMUST00000120789.8 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS GCA 72 bp | AGCTTCTTTGATTTTCTCCTCAAATGCATCACACTCTaGCTGCAGATCTGCAGCGTTCCCATCGAGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: SFFDFLLKCITL*LQICSVPIEDV Trigger: CACATCCTCGATGGGAACGCTGCAGATCTGCAGGCAGAGTGTGATGCATTTGAGGAGAAAATCAAAGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031117.13 ENSMUST00000120789.8 ENSMUST00000139632.8 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS CAA 90 bp | GAGACTGTTGGTAAGCCCAGGGAAAAGTACCTGTCCTGTCCGGGTTaGAATTTTATGATACGATTGCAGATGTACTTGGCTGCCCATTCG | + |
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Preference number: 6 (lower is better) Translates to: ETVGKPREKYLSCPG*NFMIRLQMYLAAHS Trigger: CGAATGGGCAGCCAAGTACATCTGCAATCGTATCATAAAATTCAAACCCGGACAGGACAGGTACTTTTCCCTGGGCTTACCAACAGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153536.2 |
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| CDS CAA 72 bp | GGTAAGCCCAGGGAAAAGTACCTGTCCTGTCCGGGTTaGAATTTTATGATACGATTGCAGATGTACTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GKPREKYLSCPG*NFMIRLQMYLA Trigger: AGCCAAGTACATCTGCAATCGTATCATAAAATTCAAACCCGGACAGGACAGGTACTTTTCCCTGGGCTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031117.13 ENSMUST00000120789.8 ENSMUST00000139632.8 ENSMUST00000153536.2 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS TCA 72 bp | ATCTCGTTCTTGATACTAAACTGGATCCTGGTTCATTaGAAGCAATATGGCCATCTGGACCTCCAACAAAAA | + |
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Preference number: 6 (lower is better) Translates to: ISFLILNWILVH*KQYGHLDLQQK Trigger: TTTTTGTTGGAGGTCCAGATGGCCATATTGCTTTCAATGAACCAGGATCCAGTTTAGTATCAAGAACGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166298.8 ENSMUST00000173927.8 |
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| CDS GCA 72 bp | TTTGAATTTTATGATACGATTGCAGATGTACTTGGCTaGCCATTCGCTGGCCAAGTCATAGTTATCAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: FEFYDTIADVLG*PFAGQVIVIKN Trigger: ATTCTTGATAACTATGACTTGGCCAGCGAATGGGCAGCCAAGTACATCTGCAATCGTATCATAAAATTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031117.13 ENSMUST00000120789.8 ENSMUST00000139632.8 ENSMUST00000153536.2 ENSMUST00000166298.8 ENSMUST00000173927.8 |
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