Pregenerated sensors for GNPDA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052102Ensembl transcript IDs: ENSMUST00000063814.15, ENSMUST00000139885.2, ENSMUST00000153291.2, ENSMUST00000235590.2, ENSMUST00000237487.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGCGAGGAGAGAGCAGTAGCATGTATAATCTTGGCACTCAGCTCTaGGGAGGCCACAGAGCACAGCGCATGTGCAGATGTCAGCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: KRGESSSMYNLGTQL*GGHRAQRMCRCQLP Trigger: GGGGAGCTGACATCTGCACATGCGCTGTGCTCTGTGGCCTCCTCAGAGCTGAGTGCCAAGATTATACATGCTACTGCTCTCTCCTCGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR CCA 90 bp | CTGGAAAGACCTGCCTATCCCTCTGAGGTACTGAATACCACGTCCTaGCACAGGCTAGTCACTGTATGGCTTCTTCGCAGATTGGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: LERPAYPSEVLNTTS*HRLVTVWLLRRLAF Trigger: AAAAGCCAATCTGCGAAGAAGCCATACAGTGACTAGCCTGTGCCAGGACGTGGTATTCAGTACCTCAGAGGGATAGGCAGGTCTTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
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| 3UTR TCA 90 bp | GTGACCCACGCGGATCTCCTTACTAGGGAGTGTGTAAGAATCTGTTaGGGAAAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: VTHADLLTRECVRIC*GKQSSDRRPFHFSL Trigger: AAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTTTCCTCAACAGATTCTTACACACTCCCTAGTAAGGAGATCCGCGTGGGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR GCA 90 bp | AGGGACAGGCTTCTCCCCCAGGTTCTTGGTTCTGGCAGGAAGGGCTaGTTCCTTGTGCATAATTCAAGTTCTGGAAGTGTATTCTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: RDRLLPQVLGSGRKG*FLVHNSSSGSVFFK Trigger: TTTAAAGAATACACTTCCAGAACTTGAATTATGCACAAGGAAGCAGCCCTTCCTGCCAGAACCAAGAACCTGGGGGAGAAGCCTGTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR CCA 90 bp | TCTGAGGTACTGAATACCACGTCCTGGCACAGGCTAGTCACTGTATaGCTTCTTCGCAGATTGGCTTTTCTGAATTTCCTTCTCCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: SEVLNTTSWHRLVTV*LLRRLAFLNFLLLD Trigger: ATCAAGGAGAAGGAAATTCAGAAAAGCCAATCTGCGAAGAAGCCATACAGTGACTAGCCTGTGCCAGGACGTGGTATTCAGTACCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
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| 3UTR TCA 90 bp | AACATGTATCTACCAAGCCACAGATCTGCAGCAGCCAGAGTGGACTaGAAAGTAATTCTACTCTCTCTCCTACAGAGACTTTCTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: NMYLPSHRSAAARVD*KVILLSLLQRLSGK Trigger: CTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAGAATTACTTTTCAGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGTAGATACATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCACAGAGCACAGCGCATGTGCAGATGTCAGCTCCCCACCTTGGGTAAAAACACCAAGCCACAGATCTaGAGCAGCCAGAGTGGACTG | + |
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Preference number: 2 (lower is better) Translates to: GHRAQRMCRCQLPTLGKNTKPQI*SSQSGL Trigger: CAGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGT...GTTTTTACCCAAGGTGGGGAGCTGACATCTGCACATGCGCTGTGCTCTGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATCCACACAATGGGAACAAGGGACAGGCTTCTCCCCCAGGTTCTTGGTTCACCAAGCCACAGATCTaGAGCAGCCAGAGTGGACTG | + |
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Preference number: 2 (lower is better) Translates to: DNPHNGNKGQASPPGSWFTKPQI*SSQSGL Trigger: CAGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGT...GAACCAAGAACCTGGGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACAACAGGAAAGACAATCCACACAATGGGAACAAGGGACAGGCTTCTCCCCCGTGTGCTGCCCATGTaGACAGGGGCAGAAGAATAT | + |
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Preference number: 2 (lower is better) Translates to: LTTGKTIHTMGTRDRLLPRVLPM*TGAEEY Trigger: ATATTCTTCTGCCCCTGTGCACATGGGCAGCACACG...GGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCTTTCCTGTTGTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGCCTGGGCAATGTTCTGAAAGACCTCTCCTGGAAATAGGCAGCTCTAGCAGGTTATGTCCAAAGTaGACAAGCCCTAATCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: EGPGQCSERPLLEIGSSSRLCPK*TSPNPC Trigger: GCAGGGATTAGGGCTTGTGCACTTTGGACATAACCT...GCTAGAGCTGCCTATTTCCAGGAGAGGTCTTTCAGAACATTGCCCAGGCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR CAA 90 bp | CAATCCACACAATGGGAACAAGGGACAGGCTTCTCCCCCAGGTTCTaGGTTCTGGCAGGAAGGGCTGCTTCCTTGTGCATAATTCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: QSTQWEQGTGFSPRF*VLAGRAASLCIIQV Trigger: AACTTGAATTATGCACAAGGAAGCAGCCCTTCCTGCCAGAACCAAGAACCTGGGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTACTCTCTCTCCTACAGAGACTTTCTGGAAAGACCTGCCTATCCCTCTGAGACCAAGCCACAGATCTaGAGCAGCCAGAGTGGACTG | + |
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Preference number: 2 (lower is better) Translates to: FYSLSYRDFLERPAYPSETKPQI*SSQSGL Trigger: CAGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGT...CTCAGAGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATCCACACAATGGGAACAAGGGACAGGCTTCTCCCCCAGGTTCTTGGTTCAGGTTATGTCCAAAGTaGACAAGCCCTAATCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: DNPHNGNKGQASPPGSWFRLCPK*TSPNPC Trigger: GCAGGGATTAGGGCTTGTGCACTTTGGACATAACCT...GAACCAAGAACCTGGGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAAAGCACACATACAGACAGGAGTTCTCGACAGGCGTGTGCTGCCCATGTGCCCTACAGAGACTTTCTaGAAAGACCTGCCTATCCCT | + |
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Preference number: 2 (lower is better) Translates to: EKAHIQTGVLDRRVLPMCPTETF*KDLPIP Trigger: AGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGG...GCACATGGGCAGCACACGCCTGTCGAGAACTCCTGTCTGTATGTGTGCTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGCCTGGGCAATGTTCTGAAAGACCTCTCCTGGAAATAGGCAGCTCTAGCGTCAGCTCCCCACCTTaGGTAAAAACACTGAAATCA | + |
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Preference number: 2 (lower is better) Translates to: EGPGQCSERPLLEIGSSSVSSPP*VKTLKS Trigger: TGATTTCAGTGTTTTTACCCAAGGTGGGGAGCTGAC...GCTAGAGCTGCCTATTTCCAGGAGAGGTCTTTCAGAACATTGCCCAGGCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR CAA 90 bp | ACCACGTCCTGGCACAGGCTAGTCACTGTATGGCTTCTTCGCAGATaGGCTTTTCTGAATTTCCTTCTCCTTGATACTGTACAGGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: TTSWHRLVTVWLLRR*AFLNFLLLDTVQGV Trigger: GACCCCCTGTACAGTATCAAGGAGAAGGAAATTCAGAAAAGCCAATCTGCGAAGAAGCCATACAGTGACTAGCCTGTGCCAGGACGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
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| 3UTR-3UTR TCA 90 bp | CTACTGACAACAGGAAAGACAATCCACACAATGGGAACAAGGGACAGGCTTCTCACCTGCCTATCCCTCTaGGGTACTGAATACCACGTC | + |
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Preference number: 2 (lower is better) Translates to: LLTTGKTIHTMGTRDRLLTCLSL*GTEYHV Trigger: GACGTGGTATTCAGTACCTCAGAGGGATAGGCAGGT...GAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCTTTCCTGTTGTCAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACAACAGGAAAGACAATCCACACAATGGGAACAAGGGACAGGCTTCTCCCCTCTGGCAGGAAGGGCTaGTTCCTTGTGCATAATTCA | + |
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Preference number: 2 (lower is better) Translates to: LTTGKTIHTMGTRDRLLPSGRKG*FLVHNS Trigger: TGAATTATGCACAAGGAAGCAGCCCTTCCTGCCAGA...GGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCTTTCCTGTTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGAGGGGCTCTCAAGTCTCCAGAAAGGTTATGTCCAAAGTGCACAAGCCCTCTGGCAGGAAGGGCTaGTTCCTTGTGCATAATTCA | + |
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Preference number: 2 (lower is better) Translates to: QKRGSQVSRKVMSKVHKPSGRKG*FLVHNS Trigger: TGAATTATGCACAAGGAAGCAGCCCTTCCTGCCAGA...GGGCTTGTGCACTTTGGACATAACCTTTCTGGAGACTTGAGAGCCCCTCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGGAAAGACCTGCCTATCCCTCTGAGGTACTGAATACCACGTCCTGGCACCCTACAGAGACTTTCTaGAAAGACCTGCCTATCCCT | + |
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Preference number: 2 (lower is better) Translates to: FLERPAYPSEVLNTTSWHPTETF*KDLPIP Trigger: AGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGG...GTGCCAGGACGTGGTATTCAGTACCTCAGAGGGATAGGCAGGTCTTTCCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR CCA 90 bp | ACAACAGGAAAGACAATCCACACAATGGGAACAAGGGACAGGCTTCTCCCCCAGAAAGGGGCAGAAAGTTaGGGACATAGCTCAGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: TTGKTIHTMGTRDRLLPQKGAES*GHSSVS Trigger: GCTAACTGAGCTATGTCCCCAACTTTCTGCCCCTTT...CTGGGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCTTTCCTGTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAAACTCCTTAACATGTATCTACCAAGCCACAGATCTGCAGCAGCCAGAGTGGAATTTCCTTCTCCTTaGTACTGTACAGGGGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: AKLLNMYLPSHRSAAARVEFPSP*YCTGGP Trigger: TGGACCCCCTGTACAGTATCAAGGAGAAGGAAATTC...CACTCTGGCTGCTGCAGATCTGTGGCTTGGTAGATACATGTTAAGGAGTTTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTCTTGTTGGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCACCAAGCCACAGATCTaGAGCAGCCAGAGTGGACTG | + |
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Preference number: 2 (lower is better) Translates to: FSLVGILRENKTRLAFGSTKPQI*SSQSGL Trigger: CAGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGT...GCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTGGAAGCTTTGAGTTTACCTGTGAAAGCCATCTTAGCCCCACATGCCCACCTACAGAGACTTTCTaGAAAGACCTGCCTATCCCT | + |
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Preference number: 2 (lower is better) Translates to: AFGSFEFTCESHLSPTCPPTETF*KDLPIP Trigger: AGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGG...TGGGCATGTGGGGCTAAGATGGCTTTCACAGGTAAACTCAAAGCTTCCAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGGGGCTCTCAAGTCTCCAGAAAGGTTATGTCCAAAGTGCACAAGCCCTAGCAGCCAGAGTGGACTaGAAAGTAATTCTACTCTCT | + |
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Preference number: 2 (lower is better) Translates to: EEGLSSLQKGYVQSAQALAARVD*KVILLS Trigger: AGAGAGTAGAATTACTTTTCAGTCCACTCTGGCTGC...TAGGGCTTGTGCACTTTGGACATAACCTTTCTGGAGACTTGAGAGCCCCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR CAA 90 bp | CAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAATCTaGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCTTTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: QSSDRRPFHFSLVGI*RENKTRLAFGSFEF Trigger: AAACTCAAAGCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGAAGGGCTGCTTCCTTGTGCATAATTCAAGTTCTGGAAGTGTATTCTTTAACCTGCCTATCCCTCTaGGGTACTGAATACCACGTC | + |
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Preference number: 2 (lower is better) Translates to: AGRAASLCIIQVLEVYSLTCLSL*GTEYHV Trigger: GACGTGGTATTCAGTACCTCAGAGGGATAGGCAGGT...TAAAGAATACACTTCCAGAACTTGAATTATGCACAAGGAAGCAGCCCTTCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAAAAGTAATTCTACTCTCTCTCCTACAGAGACTTTCTGGAAAGACCTGCCTACCTGCCTATCCCTCTaGGGTACTGAATACCACGTC | + |
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Preference number: 2 (lower is better) Translates to: LKSNSTLSPTETFWKDLPTCLSL*GTEYHV Trigger: GACGTGGTATTCAGTACCTCAGAGGGATAGGCAGGT...AGGCAGGTCTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAGAATTACTTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCTCCATAGCCAAACTCCTTAACATGTATCTACCAAGCCACAGATCTGCAACCTGCCTATCCCTCTaGGGTACTGAATACCACGTC | + |
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Preference number: 2 (lower is better) Translates to: MFSIAKLLNMYLPSHRSATCLSL*GTEYHV Trigger: GACGTGGTATTCAGTACCTCAGAGGGATAGGCAGGT...TGCAGATCTGTGGCTTGGTAGATACATGTTAAGGAGTTTGGCTATGGAGAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTCTTGTTGGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCCATCTTAGCCCCACATaGCCAGAAGGCCTGTTTACA | + |
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Preference number: 2 (lower is better) Translates to: FSLVGILRENKTRLAFGSHLSPT*PEGLFT Trigger: TGTAAACAGGCCTTCTGGGCATGTGGGGCTAAGATG...GCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR CCA 90 bp | TTAACATGTATCTACCAAGCCACAGATCTGCAGCAGCCAGAGTGGACTGAAAAGCCTACAGAGACTTTCTaGAAAGACCTGCCTATCCCT | + |
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Preference number: 2 (lower is better) Translates to: LTCIYQATDLQQPEWTEKPTETF*KDLPIP Trigger: AGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGG...CTTTTCAGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGTAGATACATGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTTGAGGAAAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAATGAAAATTCTCAGTaGGAAGGCTGGCAGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LLRKTELRQEAFPLFSCWNENSQ*EGWQKR Trigger: CCTCTTCTGCCAGCCTTCCCACTGAGAATTTTCATT...CCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTTTCCTCAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGGAAAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAAAGACAATCCACACAATaGGAACAAGGGACAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: VEENRAQTGGLSTFLLLERQSTQ*EQGTGF Trigger: GAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCT...TTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTTTCCTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAATTCTACTCTCTCTCCTACAGAGACTTTCTGGAAAGACCTGCCTATCCCTCTGAATACCACGTCCTaGCACAGGCTAGTCACTGTA | + |
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Preference number: 2 (lower is better) Translates to: SNSTLSPTETFWKDLPIPLNTTS*HRLVTV Trigger: TACAGTGACTAGCCTGTGCCAGGACGTGGTATTCAG...AGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAGAATTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAATTCTACTCTCTCTCCTACAGAGACTTTCTGGAAAGACCTGCCTATCCCTGAATTTCCTTCTCCTTaGTACTGTACAGGGGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SNSTLSPTETFWKDLPIPEFPSP*YCTGGP Trigger: TGGACCCCCTGTACAGTATCAAGGAGAAGGAAATTC...AGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAGAATTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
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| 3UTR-3UTR GCA 90 bp | AAAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAATCTTGAGTCTGGCAGGAAGGGCTaGTTCCTTGTGCATAATTCA | + |
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Preference number: 2 (lower is better) Translates to: KTELRQEAFPLFSCWNLESGRKG*FLVHNS Trigger: TGAATTATGCACAAGGAAGCAGCCCTTCCTGCCAGA...CTCAAGATTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAAGGGCTGCTTCCTTGTGCATAATTCAAGTTCTGGAAGTGTATTCTTTAAATGAAAATTCTCAGTaGGAAGGCTGGCAGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: AGRAASLCIIQVLEVYSLNENSQ*EGWQKR Trigger: CCTCTTCTGCCAGCCTTCCCACTGAGAATTTTCATT...TAAAGAATACACTTCCAGAACTTGAATTATGCACAAGGAAGCAGCCCTTCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGAGTGGACTGAAAAGTAATTCTACTCTCTCTCCTACAGAGACTTTCTGGTCCACCAGCTTGTTATaGACAAGCATTAAACCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SQSGLKSNSTLSPTETFWSTSLL*TSIKPL Trigger: CAAAGGTTTAATGCTTGTTCATAACAAGCTGGTGGA...CCAGAAAGTCTCTGTAGGAGAGAGAGTAGAATTACTTTTCAGTCCACTCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCTCCATAGCCAAACTCCTTAACATGTATCTACCAAGCCACAGATCTGCAGCAGATTGGCTTTTCTaGATTTCCTTCTCCTTGATA | + |
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Preference number: 2 (lower is better) Translates to: MFSIAKLLNMYLPSHRSAADWLF*ISFSLI Trigger: TATCAAGGAGAAGGAAATTCAGAAAAGCCAATCTGC...TGCAGATCTGTGGCTTGGTAGATACATGTTAAGGAGTTTGGCTATGGAGAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
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| 3UTR-3UTR CAA 90 bp | TCTAGCTTCAGACAGGCACAAGGACGGAGAAGGAGGCAGCTGACTACTCCACAGTTCTCCCCCAGGTTCTaGGTTCTGGCAGGAAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSFRQAQGRRRRQLTTPQFSPRF*VLAGRA Trigger: AGCCCTTCCTGCCAGAACCAAGAACCTGGGGGAGAA...CTGTGGAGTAGTCAGCTGCCTCCTTCTCCGTCCTTGTGCCTGTCTGAAGCTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR TCA 72 bp | GCTTCAGACAGGCACAAGGACGGAGAAGGAGGCAGCTaGCTACTCCACAGAGGCAGAGAAGATAAAGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASDRHKDGEGGS*LLHRGREDKAR Trigger: CCTTGCTTTATCTTCTCTGCCTCTGTGGAGTAGTCAGCTGCCTCCTTCTCCGTCCTTGTGCCTGTCTGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR CCA 72 bp | CCTGCCTATCCCTCTGAGGTACTGAATACCACGTCCTaGCACAGGCTAGTCACTGTATGGCTTCTTCGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PAYPSEVLNTTS*HRLVTVWLLRR Trigger: TCTGCGAAGAAGCCATACAGTGACTAGCCTGTGCCAGGACGTGGTATTCAGTACCTCAGAGGGATAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
||
| 3UTR TCA 72 bp | GAGAGCAGTAGCATGTATAATCTTGGCACTCAGCTCTaGGGAGGCCACAGAGCACAGCGCATGTGCAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: ESSSMYNLGTQL*GGHRAQRMCRC Trigger: ACATCTGCACATGCGCTGTGCTCTGTGGCCTCCTCAGAGCTGAGTGCCAAGATTATACATGCTACTGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGCTTCAGACAGGCACAAGGACGGAGAAGGAGGCAGCTGACTACTCCACAGAGACAAGGCTGGCCTTaGGAAGCTTTGAGTTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: SSFRQAQGRRRRQLTTPQRQGWP*EALSLP Trigger: AGGTAAACTCAAAGCTTCCAAAGGCCAGCCTTGTCT...CTGTGGAGTAGTCAGCTGCCTCCTTCTCCGTCCTTGTGCCTGTCTGAAGCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGCTTCAGACAGGCACAAGGACGGAGAAGGAGGCAGCTGACTACTCCACAGGTAGCATGTATAATCTaGGCACTCAGCTCTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSFRQAQGRRRRQLTTPQVACII*ALSSEE Trigger: CTCCTCAGAGCTGAGTGCCAAGATTATACATGCTAC...CTGTGGAGTAGTCAGCTGCCTCCTTCTCCGTCCTTGTGCCTGTCTGAAGCTAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTGTTGGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCTTTTTCTCCCCCAGGTTCTaGGTTCTGGCAGGAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLVGILRENKTRLAFGSFFSPRF*VLAGRA Trigger: AGCCCTTCCTGCCAGAACCAAGAACCTGGGGGAGAA...AAAGCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR GCA 72 bp | CACACATACAGACAGGAGTTCTCGACAGGCGTGTGCTaGCCATGTGCACAGGGGCAGAAGAATATAATTACA | + |
|
Preference number: 3 (lower is better) Translates to: HTYRQEFSTGVC*PCAQGQKNIIT Trigger: TGTAATTATATTCTTCTGCCCCTGTGCACATGGGCAGCACACGCCTGTCGAGAACTCCTGTCTGTATGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR GCA 72 bp | CTTCTCCCCCAGGTTCTTGGTTCTGGCAGGAAGGGCTaGTTCCTTGTGCATAATTCAAGTTCTGGAAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLPQVLGSGRKG*FLVHNSSSGSV Trigger: TACACTTCCAGAACTTGAATTATGCACAAGGAAGCAGCCCTTCCTGCCAGAACCAAGAACCTGGGGGAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR CCA 72 bp | GAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTaGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ELRQEAFPLFSC*NLEREQDKAGL Trigger: AAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR CCA 72 bp | ACTACAAACAAATGCTGGTACCAAACACAGTACTTCTaGAGGGGCCTGGGCAATGTTCTGAAAGACCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TTNKCWYQTQYF*RGLGNVLKDLS Trigger: GGAGAGGTCTTTCAGAACATTGCCCAGGCCCCTCCAGAAGTACTGTGTTTGGTACCAGCATTTGTTTGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAACAGGAAAGACAATCCACACAATGGGAACAAGGGACAGGCTTCTCCCCCAGTGGCTTCTTCGCAGATaGGCTTTTCTGAATTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: TTGKTIHTMGTRDRLLPQWLLRR*AFLNFL Trigger: AAGGAAATTCAGAAAAGCCAATCTGCGAAGAAGCCA...CTGGGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCTTTCCTGTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235590.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAGGAAAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAAAGACAAGGCTGGCCTTaGGAAGCTTTGAGTTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: VEENRAQTGGLSTFLLLERQGWP*EALSLP Trigger: AGGTAAACTCAAAGCTTCCAAAGGCCAGCCTTGTCT...TTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTTTCCTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR TCA 72 bp | CTACCAAGCCACAGATCTGCAGCAGCCAGAGTGGACTaGAAAGTAATTCTACTCTCTCTCCTACAGAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: LPSHRSAAARVD*KVILLSLLQRL Trigger: AAGTCTCTGTAGGAGAGAGAGTAGAATTACTTTTCAGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR GCA 72 bp | TTTGAGTTTACCTGTGAAAGCCATCTTAGCCCCACATaGCCAGAAGGCCTGTTTACAGAAAGGCTAGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: FEFTCESHLSPT*PEGLFTERLAT Trigger: AGTAGCTAGCCTTTCTGTAAACAGGCCTTCTGGGCATGTGGGGCTAAGATGGCTTTCACAGGTAAACTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR CCA 72 bp | CTGAATACCACGTCCTGGCACAGGCTAGTCACTGTATaGCTTCTTCGCAGATTGGCTTTTCTGAATTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LNTTSWHRLVTV*LLRRLAFLNFL Trigger: AAGGAAATTCAGAAAAGCCAATCTGCGAAGAAGCCATACAGTGACTAGCCTGTGCCAGGACGTGGTATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAAGGCCTGTTTACAGAAAGGCTAGCTACTGACAACAGGAAAGACAATCCATCTCTTGTTGGAATCTaGAGAGAGAACAAGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PEGLFTERLATDNRKDNPSLVGI*RENKTR Trigger: CCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGA...TGGATTGTCTTTCCTGTTGTCAGTAGCTAGCCTTTCTGTAAACAGGCCTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAGGAAAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAAGTGTGTAAGAATCTGTaGAGGAAAACAGAGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VEENRAQTGGLSTFLLLEVCKNL*RKTELR Trigger: TCTGAGCTCTGTTTTCCTCAACAGATTCTTACACAC...TTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTTTCCTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR TCA 72 bp | TCCTTGATACTGTACAGGGGGTCCACCAGCTTGTTATaGACAAGCATTAAACCTTTGAAATATTTGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SLILYRGSTSLL*TSIKPLKYLTV Trigger: GACAGTCAAATATTTCAAAGGTTTAATGCTTGTTCATAACAAGCTGGTGGACCCCCTGTACAGTATCAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
||
| CDS-3UTR CCA 90 bp | GGAACAAGGGACAGGCTTCTCCCCCAGGTTCTTGGTTCTGGCAGGAAGGGCTGCATCCCTCCGGCAGCCTaGATCTTCTCCTCAAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GTRDRLLPQVLGSGRKGCIPPAA*IFSSKA Trigger: CGCCTTTGAGGAGAAGATCCAGGCTGCCGGAGGGAT...GCAGCCCTTCCTGCCAGAACCAAGAACCTGGGGGAGAAGCCTGTCCCTTGTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGAGCACAGCGCATGTGCAGATGTCAGCTCCCCACCTTGGGTAAAAACATCCCTCCGGCAGCCTaGATCTTCTCCTCAAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GHRAQRMCRCQLPTLGKNIPPAA*IFSSKA Trigger: CGCCTTTGAGGAGAAGATCCAGGCTGCCGGAGGGAT...GTTTTTACCCAAGGTGGGGAGCTGACATCTGCACATGCGCTGTGCTCTGTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | CATACAGACAGGAGTTCTCGACAGGCGTGTGCTGCCCATGTGCACAGGGGCAGACACCAGGCTGGAGCCTaGCTCATTGAAGGCAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: HTDRSSRQACAAHVHRGRHQAGA*LIEGNV Trigger: CACATTGCCTTCAATGAGCCAGGCTCCAGCCTGGTG...TCTGCCCCTGTGCACATGGGCAGCACACGCCTGTCGAGAACTCCTGTCTGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGCACACATACAGACAGGAGTTCTCGACAGGCGTGTGCTGCCCATGTGCGCGTCACACTCGGCCTaGAGGTCAGCCGCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKAHIQTGVLDRRVLPMCASHSA*RSAAFP Trigger: TGGAAATGCGGCTGACCTGCAGGCCGAGTGTGACGC...GCACATGGGCAGCACACGCCTGTCGAGAACTCCTGTCTGTATGTGTGCTTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGAGCACAGCGCATGTGCAGATGTCAGCTCCCCACCTTGGGTAAAAACGGAGTGGTAACTCTCTaGGTGGTCTCGAGGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GHRAQRMCRCQLPTLGKNGVVTL*VVSRKT Trigger: GGTCTTCCTCGAGACCACCCAGAGAGTTACCACTCC...GTTTTTACCCAAGGTGGGGAGCTGACATCTGCACATGCGCTGTGCTCTGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR TCA 90 bp | GCCAAACTCCTTAACATGTATCTACCAAGCCACAGATCTGCAGCAGCCAGAGTGTGGGGAGCCCCAGGGTaGAGTACTTGTCAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKLLNMYLPSHRSAAARVWGAPG*STCQAL Trigger: CAGGGCCTGACAAGTACTTCACCCTGGGGCTCCCCA...CACTCTGGCTGCTGCAGATCTGTGGCTTGGTAGATACATGTTAAGGAGTTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAGAGGGGCTCTCAAGTCTCCAGAAAGGTTATGTCCAAAGTGCACAAGCCCGCGTCACACTCGGCCTaGAGGTCAGCCGCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKRGSQVSRKVMSKVHKPASHSA*RSAAFP Trigger: TGGAAATGCGGCTGACCTGCAGGCCGAGTGTGACGC...GGGCTTGTGCACTTTGGACATAACCTTTCTGGAGACTTGAGAGCCCCTCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | AAGCACACATACAGACAGGAGTTCTCGACAGGCGTGTGCTGCCCATGTGCACAGTCACGCCCTCCTCGATaGCTTTGTACAGAGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KHTYRQEFSTGVCCPCAQSRPPR*LCTEQR Trigger: CCTTTGCTCTGTACAAAGCCATCGAGGAGGGCGTGA...CTGTGCACATGGGCAGCACACGCCTGTCGAGAACTCCTGTCTGTATGTGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGAAGCTTTGAGTTTACCTGTGAAAGCCATCTTAGCCCCACATGCCCAGTGGCCGCCCACTCACTaGCCTGGGAATAGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLEALSLPVKAILAPHAQWPPTH*PGNSVP Trigger: TGGAACACTATTCCCAGGCCAGTGAGTGGGCGGCCA...CTGGGCATGTGGGGCTAAGATGGCTTTCACAGGTAAACTCAAAGCTTCCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTAACATGTATCTACCAAGCCACAGATCTGCAGCAGCCAGAGTGGACTGAATCTTCACACGGGTCCTaGACACCAGGCTGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTCIYQATDLQQPEWTESSHGS*TPGWSL Trigger: CAGGCTCCAGCCTGGTGTCCAGGACCCGTGTGAAGA...TTCAGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGTAGATACATGTTAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
||
| CDS-3UTR CCA 90 bp | TCTACTCTCTCTCCTACAGAGACTTTCTGGAAAGACCTGCCTATCCCTCTGAGGGACACCGTCCACATGTaGTTCACGCCCTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: STLSPTETFWKDLPIPLRDTVHM*FTPSSM Trigger: CATCGAGGAGGGCGTGAACCACATGTGGACGGTGTC...CCTCAGAGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 |
||
| CDS-3UTR CCA 90 bp | GGGGACATAGCTCAGTTAGCAAGGCACCTCCTTGGCATGTACAAGGCCCCAGGTTGGGTGTTTTCAGGGTaGATGTCAATGTGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDIAQLARHLLGMYKAPGWVFSG*MSMCLK Trigger: CTTCAAGCACATTGACATCCACCCTGAAAACACCCA...ACCTGGGGCCTTGTACATGCCAAGGAGGTGCCTTGCTAACTGAGCTATGTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGGTTCTGGCAGGAAGGGCTGCTTCCTTGTGCATAATTCAAGTTCTGGAATCCCTCCGGCAGCCTaGATCTTCTCCTCAAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSGRKGCFLVHNSSSGIPPAA*IFSSKA Trigger: CGCCTTTGAGGAGAAGATCCAGGCTGCCGGAGGGAT...TCCAGAACTTGAATTATGCACAAGGAAGCAGCCCTTCCTGCCAGAACCAAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCCCCAGGTTCTTGGTTCTGGCAGGAAGGGCTGCTTCCTTGTGCATAATCCATGGTGGGCACCTTaGCAAGATCACCATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPQVLGSGRKGCFLVHNPWWAP*QDHHQR Trigger: TCTTTGATGGTGATCTTGCCAAGGTGCCCACCATGG...ATTATGCACAAGGAAGCAGCCCTTCCTGCCAGAACCAAGAACCTGGGGGAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
||
| CDS-3UTR CCA 90 bp | TTCACTTTTAGTTCCAAGGTGGCGTCCTCGTCACACACAAACACAGTGCGGGGGCCATGGTGGGCACCTTaGCAAGATCACCATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTFSSKVASSSHTNTVRGPWWAP*QDHHQR Trigger: TCTTTGATGGTGATCTTGCCAAGGTGCCCACCATGG...CCCCCGCACTGTGTTTGTGTGTGACGAGGACGCCACCTTGGAACTAAAAGTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153291.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGAAGGGCTGCTTCCTTGTGCATAATTCAAGTTCTGGAAGTGTATTCTTTATGGGGAGCCCCAGGGTaGAGTACTTGTCAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGRAASLCIIQVLEVYSLWGAPG*STCQAL Trigger: CAGGGCCTGACAAGTACTTCACCCTGGGGCTCCCCA...TAAAGAATACACTTCCAGAACTTGAATTATGCACAAGGAAGCAGCCCTTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTGAGGAAAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGTGGAGCCTGGCTCATTaGAGGCAATGTGTCCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRKTELRQEAFPLFSCWWSLAH*RQCVHR Trigger: CCGATGGACACATTGCCTTCAATGAGCCAGGCTCCA...CCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTTTCCTCAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
||
| CDS-3UTR GCA 90 bp | TCTCTTGTTGGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCTTTGCGTCACACTCGGCCTaGAGGTCAGCCGCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLVGILRENKTRLAFGSFASHSA*RSAAFP Trigger: TGGAAATGCGGCTGACCTGCAGGCCGAGTGTGACGC...AAAGCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | TTAACATGTATCTACCAAGCCACAGATCTGCAGCAGCCAGAGTGGACTGAAAAGTGGCCGCCCACTCACTaGCCTGGGAATAGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTCIYQATDLQQPEWTEKWPPTH*PGNSVP Trigger: TGGAACACTATTCCCAGGCCAGTGAGTGGGCGGCCA...CTTTTCAGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGTAGATACATGTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | CCACAGATCTGCAGCAGCCAGAGTGGACTGAAAAGTAATTCTACTCTCTCTCCTGGAGTGGTAACTCTCTaGGTGGTCTCGAGGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PQICSSQSGLKSNSTLSPGVVTL*VVSRKT Trigger: GGTCTTCCTCGAGACCACCCAGAGAGTTACCACTCC...AGGAGAGAGAGTAGAATTACTTTTCAGTCCACTCTGGCTGCTGCAGATCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGGCCTGTTTACAGAAAGGCTAGCTACTGACAACAGGAAAGACAATCCAGACACCGTCCACATGTaGTTCACGCCCTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: PEGLFTERLATDNRKDNPDTVHM*FTPSSM Trigger: CATCGAGGAGGGCGTGAACCACATGTGGACGGTGTC...TGGATTGTCTTTCCTGTTGTCAGTAGCTAGCCTTTCTGTAAACAGGCCTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAGTGGACTGAAAAGTAATTCTACTCTCTCTCCTACAGAGACTTTCTGGTGGCCGCCCACTCACTaGCCTGGGAATAGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQSGLKSNSTLSPTETFWWPPTH*PGNSVP Trigger: TGGAACACTATTCCCAGGCCAGTGAGTGGGCGGCCA...CCAGAAAGTCTCTGTAGGAGAGAGAGTAGAATTACTTTTCAGTCCACTCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | ATAGCCAAACTCCTTAACATGTATCTACCAAGCCACAGATCTGCAGCAGCCAGAGGAGTGGTAACTCTCTaGGTGGTCTCGAGGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: IAKLLNMYLPSHRSAAARGVVTL*VVSRKT Trigger: GGTCTTCCTCGAGACCACCCAGAGAGTTACCACTCC...TCTGGCTGCTGCAGATCTGTGGCTTGGTAGATACATGTTAAGGAGTTTGGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | TCCATAGCCAAACTCCTTAACATGTATCTACCAAGCCACAGATCTGCAGCAGCCTCACGCCCTCCTCGATaGCTTTGTACAGAGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIAKLLNMYLPSHRSAAASRPPR*LCTEQR Trigger: CCTTTGCTCTGTACAAAGCCATCGAGGAGGGCGTGA...GGCTGCTGCAGATCTGTGGCTTGGTAGATACATGTTAAGGAGTTTGGCTATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 ENSMUST00000235590.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGAAGCTTTGAGTTTACCTGTGAAAGCCATCTTAGCCCCACATGCCCAGGTACTTGTCAGGCCCTaGGTTAAACTGGATGATACG | + |
|
Preference number: 4 (lower is better) Translates to: PLEALSLPVKAILAPHAQVLVRP*VKLDDT Trigger: CGTATCATCCAGTTTAACCCAGGGCCTGACAAGTAC...CTGGGCATGTGGGGCTAAGATGGCTTTCACAGGTAAACTCAAAGCTTCCAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGGGCTCTCAAGTCTCCAGAAAGGTTATGTCCAAAGTGCACAAGCCCTAGTACTTGTCAGGCCCTaGGTTAAACTGGATGATACG | + |
|
Preference number: 4 (lower is better) Translates to: EEGLSSLQKGYVQSAQALVLVRP*VKLDDT Trigger: CGTATCATCCAGTTTAACCCAGGGCCTGACAAGTAC...TAGGGCTTGTGCACTTTGGACATAACCTTTCTGGAGACTTGAGAGCCCCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | ACAACAGGAAAGACAATCCACACAATGGGAACAAGGGACAGGCTTCTCCCCCAGTGGGTGTTTTCAGGGTaGATGTCAATGTGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTGKTIHTMGTRDRLLPQWVFSG*MSMCLK Trigger: CTTCAAGCACATTGACATCCACCCTGAAAACACCCA...CTGGGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCTTTCCTGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| 3UTR CAA 72 bp | GACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAATCTaGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DRRPFHFSLVGI*RENKTRLAFGS Trigger: GCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTCTTGGTTCTGGCAGGAAGGGCTGCTTCCTTGTGCATAATTCAAGTTCTGGAATTTCCTTCTCCTTaGTACTGTACAGGGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFLVLAGRAASLCIIQVLEFPSP*YCTGGP Trigger: TGGACCCCCTGTACAGTATCAAGGAGAAGGAAATTC...CAGAACTTGAATTATGCACAAGGAAGCAGCCCTTCCTGCCAGAACCAAGAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000237487.2 |
||
| CDS-3UTR TCA 90 bp | TCTACTCTCTCTCCTACAGAGACTTTCTGGAAAGACCTGCCTATCCCTCTGAGGTCCACCAGCTTGTTATaGACAAGCATTAAACCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: STLSPTETFWKDLPIPLRSTSLL*TSIKPP Trigger: CGGAGGTTTAATGCTTGTTCATAACAAGCTGGTGGA...CCTCAGAGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | TCTACTCTCTCTCCTACAGAGACTTTCTGGAAAGACCTGCCTATCCCTCTGAGGGGCCCTGGGTTAAACTaGATGATACGGTTCCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: STLSPTETFWKDLPIPLRGPGLN*MIRFLI Trigger: TATTAGGAACCGTATCATCCAGTTTAACCCAGGGCC...CCTCAGAGGGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCTTGTTGGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCTCACGCCCTCCTCGATaGCTTTGTACAGAGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLVGILRENKTRLAFGSSRPPR*LCTEQR Trigger: CCTTTGCTCTGTACAAAGCCATCGAGGAGGGCGTGA...GCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 |
||
| CDS-3UTR TCA 90 bp | ACAACAGGAAAGACAATCCACACAATGGGAACAAGGGACAGGCTTCTCCCCCAGGCAGATTGGCTTTTCTaGATTTCCTTCTCCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: TTGKTIHTMGTRDRLLPQADWLF*ISFSLI Trigger: TATCAAGGAGAAGGAAATTCAGAAAAGCCAATCTGC...CTGGGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCTTTCCTGTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | AACTCCTTAACATGTATCTACCAAGCCACAGATCTGCAGCAGCCAGAGTGGACTTGGGTGTTTTCAGGGTaGATGTCAATGTGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLTCIYQATDLQQPEWTWVFSG*MSMCLK Trigger: CTTCAAGCACATTGACATCCACCCTGAAAACACCCA...AGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGTAGATACATGTTAAGGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR TCA 90 bp | AAAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAATCTTGAGGAATTTCCTTCTCCTTaGTACTGTACAGGGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTELRQEAFPLFSCWNLEEFPSP*YCTGGP Trigger: TGGACCCCCTGTACAGTATCAAGGAGAAGGAAATTC...CTCAAGATTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGTTGGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCTTTGTACTTGTCAGGCCCTaGGTTAAACTGGATGATACG | + |
|
Preference number: 4 (lower is better) Translates to: SLVGILRENKTRLAFGSFVLVRP*VKLDDT Trigger: CGTATCATCCAGTTTAACCCAGGGCCTGACAAGTAC...AAAGCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | CTACTGACAACAGGAAAGACAATCCACACAATGGGAACAAGGGACAGGCTTCTCTTTCCATCCAAAATGTaGGTGTTTTCAGGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLTTGKTIHTMGTRDRLLFPSKM*VFSGWM Trigger: CATCCACCCTGAAAACACCCACATTTTGGATGGAAA...GAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCTTTCCTGTTGTCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGTTGGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCTTTCTTTTAGTTCCAAGGTaGCGTCCTCGTCACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: SLVGILRENKTRLAFGSFLLVPR*RPRHTQ Trigger: TTGTGTGTGACGAGGACGCCACCTTGGAACTAAAAG...AAAGCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
||
| 3UTR CAA 72 bp | CCCAGGTTCTTGGTTCTGGCAGGAAGGGCTGCTTCCTaGTGCATAATTCAAGTTCTGGAAGTGTATTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PRFLVLAGRAAS*CIIQVLEVYSL Trigger: TAAAGAATACACTTCCAGAACTTGAATTATGCACAAGGAAGCAGCCCTTCCTGCCAGAACCAAGAACCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGGGGCTCTCAAGTCTCCAGAAAGGTTATGTCCAAAGTGCACAAGCCCTACATACTCGTCCATGTTaGAGGTTTTCACATATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EEGLSSLQKGYVQSAQALHTRPC*RFSHIE Trigger: TTCAATATGTGAAAACCTTCAACATGGACGAGTATG...TAGGGCTTGTGCACTTTGGACATAACCTTTCTGGAGACTTGAGAGCCCCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS-3UTR CCA 90 bp | AAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAATCTTGAGAGGCCCTGGGTTAAACTaGATGATACGGTTCCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: KQSSDRRPFHFSLVGILRGPGLN*MIRFLI Trigger: TATTAGGAACCGTATCATCCAGTTTAACCCAGGGCC...TCTCAAGATTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| 3UTR CAA 72 bp | TGGCACAGGCTAGTCACTGTATGGCTTCTTCGCAGATaGGCTTTTCTGAATTTCCTTCTCCTTGATACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WHRLVTVWLLRR*AFLNFLLLDTV Trigger: TACAGTATCAAGGAGAAGGAAATTCAGAAAAGCCAATCTGCGAAGAAGCCATACAGTGACTAGCCTGTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153291.2 ENSMUST00000235590.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAGGAAAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAATCCACCAGCTTGTTATaGACAAGCATTAAACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VEENRAQTGGLSTFLLLESTSLL*TSIKPL Trigger: CAAAGGTTTAATGCTTGTTCATAACAAGCTGGTGGA...TTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTTTCCTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCTTTGAGTTTTTTCCATCCAAAATGTaGGTGTTTTCAGGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VGILRENKTRLAFGSFEFFPSKM*VFSGWM Trigger: CATCCACCCTGAAAACACCCACATTTTGGATGGAAA...AAACTCAAAGCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAAC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR TCA 90 bp | AGAACAAGACAAGGCTGGCCTTTGGAAGCTTTGAGTTTACCTGTGAAAGCCATCCATACTCGTCCATGTTaGAGGTTTTCACATATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTRQGWPLEALSLPVKAIHTRPC*RFSHIE Trigger: TTCAATATGTGAAAACCTTCAACATGGACGAGTATG...GATGGCTTTCACAGGTAAACTCAAAGCTTCCAAAGGCCAGCCTTGTCTTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS-3UTR TCA 90 bp | AAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGAATCTTGAGAGCAGATTGGCTTTTCTaGATTTCCTTCTCCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: KQSSDRRPFHFSLVGILRADWLF*ISFSLI Trigger: TATCAAGGAGAAGGAAATTCAGAAAAGCCAATCTGC...TCTCAAGATTCCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000237487.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTAATTCTACTCTCTCTCCTACAGAGACTTTCTGGAAAGACCTGCCTATCCTTTCCATCCAAAATGTaGGTGTTTTCAGGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KVILLSLLQRLSGKTCLSFPSKM*VFSGWM Trigger: CATCCACCCTGAAAACACCCACATTTTGGATGGAAA...GGATAGGCAGGTCTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAGAATTACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCTTTGAGTTTCATACTCGTCCATGTTaGAGGTTTTCACATATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGILRENKTRLAFGSFEFHTRPC*RFSHIE Trigger: TTCAATATGTGAAAACCTTCAACATGGACGAGTATG...AAACTCAAAGCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS CCA 90 bp | TCGGGGCCAATGCCTCCGACAAAGAGTTCGATCCCTCCGGCAGCCTaGATCTTCTCCTCAAAGGCGTCACACTCGGCCTGCAGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGPMPPTKSSIPPAA*IFSSKASHSACRSA Trigger: GGCTGACCTGCAGGCCGAGTGTGACGCCTTTGAGGAGAAGATCCAGGCTGCCGGAGGGATCGAACTCTTTGTCGGAGGCATTGGCCCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
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| CDS TCA 90 bp | GAGTCTTCACACGGGTCCTGGACACCAGGCTGGAGCCTGGCTCATTaGAGGCAATGTGTCCATCGGGGCCAATGCCTCCGACAAAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESSHGSWTPGWSLAH*RQCVHRGQCLRQRV Trigger: AACTCTTTGTCGGAGGCATTGGCCCCGATGGACACATTGCCTTCAATGAGCCAGGCTCCAGCCTGGTGTCCAGGACCCGTGTGAAGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
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| CDS GCA 90 bp | CCTCCGGCAGCCTGGATCTTCTCCTCAAAGGCGTCACACTCGGCCTaGAGGTCAGCCGCATTTCCATCCAAAATGTGGGTGTTTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPAAWIFSSKASHSA*RSAAFPSKMWVFSG Trigger: CCCTGAAAACACCCACATTTTGGATGGAAATGCGGCTGACCTGCAGGCCGAGTGTGACGCCTTTGAGGAGAAGATCCAGGCTGCCGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS-3UTR CAA 90 bp | CATACAGACAGGAGTTCTCGACAGGCGTGTGCTGCCCATGTGCACAGGGGCAGACCCAGGGTGAAGTACTaGTCAGGCCCTGGGTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HTDRSSRQACAAHVHRGRPRVKY*SGPGLN Trigger: GTTTAACCCAGGGCCTGACAAGTACTTCACCCTGGG...TCTGCCCCTGTGCACATGGGCAGCACACGCCTGTCGAGAACTCCTGTCTGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS CCA 90 bp | GTGGGGAGCCCCAGGGTGAAGTACTTGTCAGGCCCTGGGTTAAACTaGATGATACGGTTCCTAATATACTTGGCCGCCCACTCACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGSPRVKYLSGPGLN*MIRFLIYLAAHSLA Trigger: GGCCAGTGAGTGGGCGGCCAAGTATATTAGGAACCGTATCATCCAGTTTAACCCAGGGCCTGACAAGTACTTCACCCTGGGGCTCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000139885.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS CCA 90 bp | GGTGCTCCCAGTGGGGAGCCCCAGGGTGAAGTACTTGTCAGGCCCTaGGTTAAACTGGATGATACGGTTCCTAATATACTTGGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GAPSGEPQGEVLVRP*VKLDDTVPNILGRP Trigger: TGGGCGGCCAAGTATATTAGGAACCGTATCATCCAGTTTAACCCAGGGCCTGACAAGTACTTCACCCTGGGGCTCCCCACTGGGAGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000139885.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS CCA 90 bp | ACAAGCATTAAACCTCCGACAAAGAGTTCGATCCCTCCGGCAGCCTaGATCTTCTCCTCAAAGGCGTCACACTCGGCCTGCAGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSIKPPTKSSIPPAA*IFSSKASHSACRSA Trigger: GGCTGACCTGCAGGCCGAGTGTGACGCCTTTGAGGAGAAGATCCAGGCTGCCGGAGGGATCGAACTCTTTGTCGGAGGTTTAATGCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237487.2 |
||
| CDS-3UTR CAA 90 bp | GGCCACAGAGCACAGCGCATGTGCAGATGTCAGCTCCCCACCTTGGGTAAAAACCCCAGGGTGAAGTACTaGTCAGGCCCTGGGTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GHRAQRMCRCQLPTLGKNPRVKY*SGPGLN Trigger: GTTTAACCCAGGGCCTGACAAGTACTTCACCCTGGG...GTTTTTACCCAAGGTGGGGAGCTGACATCTGCACATGCGCTGTGCTCTGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CAA 90 bp | AAGCACACATACAGACAGGAGTTCTCGACAGGCGTGTGCTGCCCATGTGCACAGCTGGAGCCTGGCTCATaGAAGGCAATGTGTCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: KHTYRQEFSTGVCCPCAQLEPGS*KAMCPS Trigger: CGATGGACACATTGCCTTCAATGAGCCAGGCTCCAG...CTGTGCACATGGGCAGCACACGCCTGTCGAGAACTCCTGTCTGTATGTGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCACAGCGCATGTGCAGATGTCAGCTCCCCACCTTGGGTAAAAACACTGCCCTCCTCGATGGCTTaGTACAGAGCAAAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEHSACADVSSPPWVKTLPSSMA*YRAKAL Trigger: CAAGGCCTTTGCTCTGTACAAAGCCATCGAGGAGGG...CAGTGTTTTTACCCAAGGTGGGGAGCTGACATCTGCACATGCGCTGTGCTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 |
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| CDS-3UTR CAA 90 bp | GCAGAAGAGGGGCTCTCAAGTCTCCAGAAAGGTTATGTCCAAAGTGCACAAGCCTCAAAGAACCTAGCGTaGGCCAGGATGGTGTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: AEEGLSSLQKGYVQSAQASKNLA*ARMVSI Trigger: TATGGACACCATCCTGGCCAACGCTAGGTTCTTTGA...GGCTTGTGCACTTTGGACATAACCTTTCTGGAGACTTGAGAGCCCCTCTTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
||
| CDS-3UTR CAA 90 bp | CTGTTGAGGAAAACAGAGCTCAGACAGGAGGCCTTTCCACTTTTCTCTTGTTGGGCCATGGTGGGCACCTaGGCAAGATCACCATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRKTELRQEAFPLFSCWAMVGT*ARSPSK Trigger: CTTTGATGGTGATCTTGCCAAGGTGCCCACCATGGC...CCAACAAGAGAAAAGTGGAAAGGCCTCCTGTCTGAGCTCTGTTTTCCTCAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
||
| CDS-3UTR CAA 90 bp | AACTCCTTAACATGTATCTACCAAGCCACAGATCTGCAGCAGCCAGAGTGGACTGCCATGGTGGGCACCTaGGCAAGATCACCATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSLTCIYQATDLQQPEWTAMVGT*ARSPSK Trigger: CTTTGATGGTGATCTTGCCAAGGTGCCCACCATGGC...AGTCCACTCTGGCTGCTGCAGATCTGTGGCTTGGTAGATACATGTTAAGGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGATCTGCAGCAGCCAGAGTGGACTGAAAAGTAATTCTACTCTCTCTCCTCCCTCCTCGATGGCTTaGTACAGAGCAAAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PQICSSQSGLKSNSTLSPPSSMA*YRAKAL Trigger: CAAGGCCTTTGCTCTGTACAAAGCCATCGAGGAGGG...AGGAGAGAGAGTAGAATTACTTTTCAGTCCACTCTGGCTGCTGCAGATCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 ENSMUST00000235590.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCCTGGGCAATGTTCTGAAAGACCTCTCCTGGAAATAGGCAGCTCTAGCTGGCTTCTTCGCAGATaGGCTTTTCTGAATTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EGPGQCSERPLLEIGSSSWLLRR*AFLNFL Trigger: AAGGAAATTCAGAAAAGCCAATCTGCGAAGAAGCCA...GCTAGAGCTGCCTATTTCCAGGAGAGGTCTTTCAGAACATTGCCCAGGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000237487.2 |
||
| CDS TCA 90 bp | ATTTCCTTCTCCTTGATACTGTACAGGGGGTCCACCAGCTTGTTATaGACAAGCATTAAACCTCCGACAAAGAGTTCGATCCCTCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ISFSLILYRGSTSLL*TSIKPPTKSSIPPA Trigger: TGCCGGAGGGATCGAACTCTTTGTCGGAGGTTTAATGCTTGTTCATAACAAGCTGGTGGACCCCCTGTACAGTATCAAGGAGAAGGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237487.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAAAGTAATTCTACTCTCTCTCCTACAGAGACTTTCTGGAAAGACCTGCCTCCCAGGGTGAAGTACTaGTCAGGCCCTGGGTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LKSNSTLSPTETFWKDLPPRVKY*SGPGLN Trigger: GTTTAACCCAGGGCCTGACAAGTACTTCACCCTGGG...AGGCAGGTCTTTCCAGAAAGTCTCTGTAGGAGAGAGAGTAGAATTACTTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CAA 90 bp | CTGACAACAGGAAAGACAATCCACACAATGGGAACAAGGGACAGGCTTCTCCCCTGGCTTCTTCGCAGATaGGCTTTTCTGAATTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTTGKTIHTMGTRDRLLPWLLRR*AFLNFL Trigger: AAGGAAATTCAGAAAAGCCAATCTGCGAAGAAGCCA...GGGGAGAAGCCTGTCCCTTGTTCCCATTGTGTGGATTGTCTTTCCTGTTGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000237487.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTGGAAGCTTTGAGTTTACCTGTGAAAGCCATCTTAGCCCCACATGCCCAGGAAGGTTTTCACATATaGAAAGGACAGGTCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: PLEALSLPVKAILAPHAQEGFHI*KGQVPI Trigger: AATGGGGACCTGTCCTTTCAATATGTGAAAACCTTC...CTGGGCATGTGGGGCTAAGATGGCTTTCACAGGTAAACTCAAAGCTTCCAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCTCTTGTTGGAATCTTGAGAGAGAACAAGACAAGGCTGGCCTTTGGAAGCGAAGGTTTTCACATATaGAAAGGACAGGTCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: FSLVGILRENKTRLAFGSEGFHI*KGQVPI Trigger: AATGGGGACCTGTCCTTTCAATATGTGAAAACCTTC...GCTTCCAAAGGCCAGCCTTGTCTTGTTCTCTCTCAAGATTCCAACAAGAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063814.15 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS TCA 72 bp | CACGGGTCCTGGACACCAGGCTGGAGCCTGGCTCATTaGAGGCAATGTGTCCATCGGGGCCAATGCCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: HGSWTPGWSLAH*RQCVHRGQCLR Trigger: TCGGAGGCATTGGCCCCGATGGACACATTGCCTTCAATGAGCCAGGCTCCAGCCTGGTGTCCAGGACCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
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| CDS CAA 72 bp | ACACGGGTCCTGGACACCAGGCTGGAGCCTGGCTCATaGAAGGCAATGTGTCCATCGGGGCCAATGCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: TRVLDTRLEPGS*KAMCPSGPMPP Trigger: CGGAGGCATTGGCCCCGATGGACACATTGCCTTCAATGAGCCAGGCTCCAGCCTGGTGTCCAGGACCCGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
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| CDS CAA 72 bp | GTGCCGACCCCCACTGTCAGGGCCATGGTGGGCACCTaGGCAAGATCACCATCAAAGAACCTAGCGTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VPTPTVRAMVGT*ARSPSKNLALA Trigger: GGCCAACGCTAGGTTCTTTGATGGTGATCTTGCCAAGGTGCCCACCATGGCCCTGACAGTGGGGGTCGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 |
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| CDS CCA 72 bp | ATGCCTCCGACAAAGAGTTCGATCCCTCCGGCAGCCTaGATCTTCTCCTCAAAGGCGTCACACTCGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: MPPTKSSIPPAA*IFSSKASHSAC Trigger: GCAGGCCGAGTGTGACGCCTTTGAGGAGAAGATCCAGGCTGCCGGAGGGATCGAACTCTTTGTCGGAGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
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| CDS CCA 72 bp | TCACCTCCGACAAAGAGTTCGATCCCTCCGGCAGCCTaGATCTTCTCCTCAAAGGCGTCACACTCGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SPPTKSSIPPAA*IFSSKASHSAC Trigger: GCAGGCCGAGTGTGACGCCTTTGAGGAGAAGATCCAGGCTGCCGGAGGGATCGAACTCTTTGTCGGAGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235590.2 |
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| CDS CAA 90 bp | TCCATGACAGTGCCGACCCCCACTGTCAGGGCCATGGTGGGCACCTaGGCAAGATCACCATCAAAGAACCTAGCGTTGGCCAGGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: SMTVPTPTVRAMVGT*ARSPSKNLALARMV Trigger: CACCATCCTGGCCAACGCTAGGTTCTTTGATGGTGATCTTGCCAAGGTGCCCACCATGGCCCTGACAGTGGGGGTCGGCACTGTCATGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063814.15 ENSMUST00000153291.2 |
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| CDS CAA 90 bp | AGAGTCTTCACACGGGTCCTGGACACCAGGCTGGAGCCTGGCTCATaGAAGGCAATGTGTCCATCGGGGCCAATGCCTCCGACAAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: RVFTRVLDTRLEPGS*KAMCPSGPMPPTKS Trigger: ACTCTTTGTCGGAGGCATTGGCCCCGATGGACACATTGCCTTCAATGAGCCAGGCTCCAGCCTGGTGTCCAGGACCCGTGTGAAGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
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| CDS CCA 72 bp | AAACCTCCGACAAAGAGTTCGATCCCTCCGGCAGCCTaGATCTTCTCCTCAAAGGCGTCACACTCGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KPPTKSSIPPAA*IFSSKASHSAC Trigger: GCAGGCCGAGTGTGACGCCTTTGAGGAGAAGATCCAGGCTGCCGGAGGGATCGAACTCTTTGTCGGAGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237487.2 |
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| CDS CAA 90 bp | GCCATGGTGGGCACCTTGGCAAGATCACCATCAAAGAACCTAGCGTaGGCCAGGATGGTGTCCATAGCCAGAGTCTTCACACGGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: AMVGTLARSPSKNLA*ARMVSIARVFTRVL Trigger: CAGGACCCGTGTGAAGACTCTGGCTATGGACACCATCCTGGCCAACGCTAGGTTCTTTGATGGTGATCTTGCCAAGGTGCCCACCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063814.15 |
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| CDS CCA 72 bp | CCCAGGGTGAAGTACTTGTCAGGCCCTGGGTTAAACTaGATGATACGGTTCCTAATATACTTGGCCGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PRVKYLSGPGLN*MIRFLIYLAAH Trigger: GTGGGCGGCCAAGTATATTAGGAACCGTATCATCCAGTTTAACCCAGGGCCTGACAAGTACTTCACCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000139885.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS CCA 72 bp | AGTGGGGAGCCCCAGGGTGAAGTACTTGTCAGGCCCTaGGTTAAACTGGATGATACGGTTCCTAATATACTT | + |
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Preference number: 6 (lower is better) Translates to: SGEPQGEVLVRP*VKLDDTVPNIL Trigger: AAGTATATTAGGAACCGTATCATCCAGTTTAACCCAGGGCCTGACAAGTACTTCACCCTGGGGCTCCCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000139885.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS TCA 72 bp | GGTGGTCTCGAGGAAGACCCACATACTCGTCCATGTTaGAGGTTTTCACATATTGAAAGGACAGGTCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GGLEEDPHTRPC*RFSHIERTGPH Trigger: ATGGGGACCTGTCCTTTCAATATGTGAAAACCTTCAACATGGACGAGTATGTGGGTCTTCCTCGAGACCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000139885.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS CCA 72 bp | GAAGAAATTATTCCACATGAAGGAGTGGTAACTCTCTaGGTGGTCTCGAGGAAGACCCACATACTCGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: EEIIPHEGVVTL*VVSRKTHILVH Trigger: ATGGACGAGTATGTGGGTCTTCCTCGAGACCACCCAGAGAGTTACCACTCCTTCATGTGGAATAATTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000139885.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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| CDS TCA 72 bp | TCCTTGATACTGTACAGGGGGTCCACCAGCTTGTTATaGACAAGCATTAAACCTCCGACAAAGAGTTCGATC | + |
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Preference number: 6 (lower is better) Translates to: SLILYRGSTSLL*TSIKPPTKSSI Trigger: GATCGAACTCTTTGTCGGAGGTTTAATGCTTGTTCATAACAAGCTGGTGGACCCCCTGTACAGTATCAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237487.2 |
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| CDS CAA 90 bp | TCGAGGAAGACCCACATACTCGTCCATGTTGAAGGTTTTCACATATaGAAAGGACAGGTCCCCATTCTTATAGTACTCGATCAGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SRKTHILVHVEGFHI*KGQVPILIVLDQLL Trigger: CAGAAGCTGATCGAGTACTATAAGAATGGGGACCTGTCCTTTCAATATGTGAAAACCTTCAACATGGACGAGTATGTGGGTCTTCCTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063814.15 ENSMUST00000139885.2 ENSMUST00000235590.2 ENSMUST00000237487.2 |
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