Pregenerated sensors for GNPAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031985Ensembl transcript IDs: ENSMUST00000034466.10, ENSMUST00000161986.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGGCCAGCAGCCATCACGGTGGGAGGGTCACACCGACACTCCCATaGTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: PASSHHGGRVTPTLP*SPPPGRSMAQRSQG Trigger: TCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTGTGACCCTCCCACCGTGATGGCTGCTGGCCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR CCA 90 bp | GGGTCACACCGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATaGCTCAGAGGTCTCAAGGAGACAGACGTCACATCTTCCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: GSHRHSHALLLLAEA*LRGLKETDVTSSSQ Trigger: CTGAGAGGAAGATGTGACGTCTGTCTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTGTGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR GCA 90 bp | GAAATGTTTTCAAGACTCCTTTATTTGACAACACAGTGCCACGAATaGCGGCCAGCAGCCATCACGGTGGGAGGGTCACACCGACACTCC | + |
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Preference number: 1 (lower is better) Translates to: EMFSRLLYLTTQCHE*RPAAITVGGSHRHS Trigger: GGAGTGTCGGTGTGACCCTCCCACCGTGATGGCTGCTGGCCGGCATTCGTGGCACTGTGTTGTCAAATAAAGGAGTCTTGAAAACATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR GCA 90 bp | GCTGCCCAAGAAATGTTTTCAAGACTCCTTTATTTGACAACACAGTaGCACGAATGCCGGCCAGCAGCCATCACGGTGGGAGGGTCACAC | + |
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Preference number: 1 (lower is better) Translates to: AAQEMFSRLLYLTTQ*HECRPAAITVGGSH Trigger: GTGTGACCCTCCCACCGTGATGGCTGCTGGCCGGCATTCGTGGCACTGTGTTGTCAAATAAAGGAGTCTTGAAAACATTTCTTGGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR CCA 90 bp | GTCTCAAGGAGACAGACGTCACATCTTCCTCTCAGTGCCCATTTGTaGCAGAGTAAGTCCTTTGTGACTGTCACTATGGAACTGTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: VSRRQTSHLPLSAHL*QSKSFVTVTMELCF Trigger: AAAACACAGTTCCATAGTGACAGTCACAAAGGACTTACTCTGCCACAAATGGGCACTGAGAGGAAGATGTGACGTCTGTCTCCTTGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTTAGTGCCCTGTGGTTTGATTGGGCCCCTCATGGAGCTGTGGGTGGGAACACAGCAGCCATCACGGTaGGAGGGTCACACCGACACT | + |
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Preference number: 2 (lower is better) Translates to: FLVPCGLIGPLMELWVGTQQPSR*EGHTDT Trigger: AGTGTCGGTGTGACCCTCCCACCGTGATGGCTGCTG...TGTTCCCACCCACAGCTCCATGAGGGGCCCAATCAAACCACAGGGCACTAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGTTCTTAGTGCCCTGTGGTTTGATTGGGCCCCTCATGGAGCTGTGGGTGGTAGGTGTGGGAATCTaGGTGGCAGTAAACGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TVFLVPCGLIGPLMELWVVGVGI*VAVNGE Trigger: CTCCCCGTTTACTGCCACTCAGATTCCCACACCTAC...CACCCACAGCTCCATGAGGGGCCCAATCAAACCACAGGGCACTAAGAACACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR CAA 90 bp | GGTTTTATACACACCCAACACACAGTGTTCTTAGTGCCCTGTGGTTaGATTGGGCCCCTCATGGAGCTGTGGGTGGGAACACGCACCAGT | + |
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Preference number: 2 (lower is better) Translates to: GFIHTQHTVFLVPCG*IGPLMELWVGTRTS Trigger: ACTGGTGCGTGTTCCCACCCACAGCTCCATGAGGGGCCCAATCAAACCACAGGGCACTAAGAACACTGTGTGTTGGGTGTGTATAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAAGGAGACAGACGTAGAGTAAGTCCTTTGTaGCTGTCACTATGGAACTGT | + |
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Preference number: 2 (lower is better) Translates to: CSPPPGRSMAQRSQGDRRRVSPL*LSLWNC Trigger: ACAGTTCCATAGTGACAGTCACAAAGGACTTACTCT...ACGTCTGTCTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR-3UTR CCA 90 bp | CGTCCTTGGTTTTATACACACCCAACACACAGTGTTCTTAGTGCCCTGTGGTTTCTCCTGGCAGAAGCATaGCTCAGAGGTCTCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RPWFYTHPTHSVLSALWFLLAEA*LRGLKE Trigger: CTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAG...AAACCACAGGGCACTAAGAACACTGTGTGTTGGGTGTGTATAAAACCAAGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTGCACAGATAAGTGGTCAGTGCTGCTGCTGTACTAAACCTCGGAGGTCACTCAGTGCCCATTTGTaGCAGAGTAAGTCCTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: FSAQISGQCCCCTKPRRSLSAHL*QSKSFV Trigger: CACAAAGGACTTACTCTGCCACAAATGGGCACTGAG...TGACCTCCGAGGTTTAGTACAGCAGCAGCACTGACCACTTATCTGTGCACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR CCA 72 bp | CACAGTGCCACGAATGCCGGCCAGCAGCCATCACGGTaGGAGGGTCACACCGACACTCCCATGCTCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: HSATNAGQQPSR*EGHTDTPMLSS Trigger: GGAGGAGAGCATGGGAGTGTCGGTGTGACCCTCCCACCGTGATGGCTGCTGGCCGGCATTCGTGGCACTGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR GCA 72 bp | AGCCATCACGGTGGGAGGGTCACACCGACACTCCCATaGTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: SHHGGRVTPTLP*SPPPGRSMAQR Trigger: CCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTGTGACCCTCCCACCGTGATGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR CCA 72 bp | GAGGGTCACACCGACACTCCCATGCTCTCCTCCTCCTaGCAGAAGCATGGCTCAGAGGTCTCAAGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: EGHTDTPMLSSS*QKHGSEVSRRQ Trigger: CTGTCTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTGTGACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR CCA 72 bp | CGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATaGCTCAGAGGTCTCAAGGAGACAGACGTCACATCT | + |
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Preference number: 3 (lower is better) Translates to: RHSHALLLLAEA*LRGLKETDVTS Trigger: AGATGTGACGTCTGTCTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR GCA 72 bp | TCAAGACTCCTTTATTTGACAACACAGTGCCACGAATaGCGGCCAGCAGCCATCACGGTGGGAGGGTCACAC | + |
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Preference number: 3 (lower is better) Translates to: SRLLYLTTQCHE*RPAAITVGGSH Trigger: GTGTGACCCTCCCACCGTGATGGCTGCTGGCCGGCATTCGTGGCACTGTGTTGTCAAATAAAGGAGTCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR CCA 72 bp | TATACACACCCAACACACAGTGTTCTTAGTGCCCTGTaGTTTGATTGGGCCCCTCATGGAGCTGTGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: YTHPTHSVLSAL*FDWAPHGAVGG Trigger: CCCACCCACAGCTCCATGAGGGGCCCAATCAAACCACAGGGCACTAAGAACACTGTGTGTTGGGTGTGTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR TCA 72 bp | CTCTCAGTGCCCATTTGTGGCAGAGTAAGTCCTTTGTaGCTGTCACTATGGAACTGTGTTTTCTACAACTGC | + |
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Preference number: 3 (lower is better) Translates to: LSVPICGRVSPL*LSLWNCVFYNC Trigger: GCAGTTGTAGAAAACACAGTTCCATAGTGACAGTCACAAAGGACTTACTCTGCCACAAATGGGCACTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR GCA 72 bp | TTATTGAAAACACTGACAGAGAACAGTGAGCTGGACTaGTTTTCAGGTTCGGAAGGTGTACTTATGCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: LLKTLTENSELD*FSGSEGVLMQN Trigger: GTTCTGCATAAGTACACCTTCCGAACCTGAAAAGCAGTCCAGCTCACTGTTCTCTGTCAGTGTTTTCAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | AGCAGCCATCACGGTGGGAGGGTCACACCGACACTCCCATGCTCTCCTCCTCCTCAGGAAGTCCATTCCTaGTGCGATCACTGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: SSHHGGRVTPTLPCSPPPQEVHS*CDHWHR Trigger: CCTGTGCCAGTGATCGCAGCAGGAATGGACTTCCTG...AGGAGGAGGAGAGCATGGGAGTGTCGGTGTGACCCTCCCACCGTGATGGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | AGCAGCCATCACGGTGGGAGGGTCACACCGACACTCCCATGCTCTCCTCCTCCTAGCCCAGGTGTCATGTaGAAAGCCAGGGCGACTAAG | + |
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Preference number: 4 (lower is better) Translates to: SSHHGGRVTPTLPCSPPPSPGVM*KARATK Trigger: CTTAGTCGCCCTGGCTTTGCACATGACACCTGGGCT...AGGAGGAGGAGAGCATGGGAGTGTCGGTGTGACCCTCCCACCGTGATGGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | TTTGACAACACAGTGCCACGAATGCCGGCCAGCAGCCATCACGGTGGGAGGGTCGACCACCAGGAGCCATaGGCTCAGAGCCAGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: FDNTVPRMPASSHHGGRVDHQEP*AQSQVF Trigger: GAAAACCTGGCTCTGAGCCCATGGCTCCTGGTGGTC...GACCCTCCCACCGTGATGGCTGCTGGCCGGCATTCGTGGCACTGTGTTGTCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | CACGGTGGGAGGGTCACACCGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCACCGAATGGCTCCTATaGGCAGTTTGTGGCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: HGGRVTPTLPCSPPPGRSTEWLL*AVCGSS Trigger: AGATGAGCCACAAACTGCGCATAGGAGCCATTCGGT...GCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTGTGACCCTCCCACCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | TGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAAGGAGACAGACGTTGTAGCTGCGGTGACTaGGCAGCAGGACCACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: CSPPPGRSMAQRSQGDRRCSCGD*AAGPQG Trigger: ACCCTGTGGTCCTGCTGCCCAGTCACCGCAGCTACA...ACGTCTGTCTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR TCA 90 bp | CACCGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCTTTGAAGTAGAATGGTaGCCACCAGGAGCCATGGGC | + |
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Preference number: 4 (lower is better) Translates to: HRHSHALLLLAEAWLRGLFEVEW*PPGAMG Trigger: GCCCATGGCTCCTGGTGGTCACCATTCTACTTCAAA...GAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR TCA 90 bp | CACCGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAGACATCCTCTTTCCTaGGCCCAGGTGTCATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: HRHSHALLLLAEAWLRGLRHPLS*AQVSCA Trigger: TGCACATGACACCTGGGCTCAGGAAAGAGGATGTCT...GAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | CTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAAGGAGACAGACGTCACACTGGCCAGGTTAGAGTaGAGGAGGATGCTGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: LLLLAEAWLRGLKETDVTLARLE*RRMLDW Trigger: CCAGTCCAGCATCCTCCTGCACTCTAACCTGGCCAG...TGTGACGTCTGTCTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | CACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAAGGAGTCAGTGACAAAGGCTTaGACGTCCTCAGGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: HSHALLLLAEAWLRGLKESVTKA*TSSGCF Trigger: GAAGCAGCCTGAGGACGTGCAAGCCTTTGTCACTGA...CTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | CACCGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCGGCTGGTTTTCCTATTaGCTTCTTACATCCGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: HRHSHALLLLAEAWLRGLGWFSY*LLTSEH Trigger: ATGCTCGGATGTAAGAAGCCAATAGGAAAACCAGCC...GAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR TCA 90 bp | ACACCGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTGCGCGTTGTAGCTTTTaGATGCCTTCTTCATTCACA | + |
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Preference number: 4 (lower is better) Translates to: TPTLPCSPPPGRSMAQRSARCSF*MPSSFT Trigger: TGTGAATGAAGAAGGCATTCAAAAGCTACAACGCGC...AGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR TCA 90 bp | CGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAAGATGGATAGCTGGTTTTaGAGTAGAATGGTGACCACC | + |
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Preference number: 4 (lower is better) Translates to: RHSHALLLLAEAWLRGLKMDSWF*SRMVTT Trigger: GGTGGTCACCATTCTACTTCAAAACCAGCTATCCAT...CTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | CTGACAGAGAACAGTGAGCTGGACTGCTTTTCAGGTTCGGAAGGTGTACTTATGAGCAGGACCACAGGGTaGTCCTGGACAGCGCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LTENSELDCFSGSEGVLMSRTTG*SWTARC Trigger: ACAACGCGCTGTCCAGGAGCACCCTGTGGTCCTGCT...CATAAGTACACCTTCCGAACCTGAAAAGCAGTCCAGCTCACTGTTCTCTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | CACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAAGGAGAACCACACCGCAGCATaGTCTTCACATATTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: HSHALLLLAEAWLRGLKENHTAA*SSHIQR Trigger: TCTCTGAATATGTGAAGACCATGCTGCGGTGTGGTT...CTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | TGTGGGTGGGAACACGCACCAGTGTCCCTTCTTCAGTGCACAGATAAGTGGTCAAGGAGGATGCTGGACTaGACCACTTCCTCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: CGWEHAPVSLLQCTDKWSRRMLD*TTSSGS Trigger: ACTTCCTGAGGAAGTGGTCCAGTCCAGCATCCTCCT...TGACCACTTATCTGTGCACTGAAGAAGGGACACTGGTGCGTGTTCCCACCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR TCA 90 bp | GAACACGCACCAGTGTCCCTTCTTCAGTGCACAGATAAGTGGTCAGTGCTGCTGCTTCCTCAAAGTCCCTaGGTGTGTTTCCTGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: EHAPVSLLQCTDKWSVLLLPQSP*VCFLEG Trigger: TCCTTCCAGGAAACACACTCAGGGACTTTGAGGAAG...CAGCAGCACTGACCACTTATCTGTGCACTGAAGAAGGGACACTGGTGCGTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | CACCGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCTCCGAGGATCTCATATaGATAAAGACTCTCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: HRHSHALLLLAEAWLRGLSEDLI*IKTLFQ Trigger: TTGGAAGAGAGTCTTTATGCATATGAGATCCTCGGA...GAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | TGGAGCTGTGGGTGGGAACACGCACCAGTGTCCCTTCTTCAGTGCACAGATAAGGGTGAACTTCCTGGCTaGAACCAAGTATTCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: WSCGWEHAPVSLLQCTDKGELPG*NQVFLL Trigger: GAGAAGGAATACTTGGTTGCAGCCAGGAAGTTCACC...CTTATCTGTGCACTGAAGAAGGGACACTGGTGCGTGTTCCCACCCACAGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR TCA 90 bp | TTCAGTGCACAGATAAGTGGTCAGTGCTGCTGCTGTACTAAACCTCGGAGGTCAGACGGGCAAAAATGTTaGGCAGCTGGTTCCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FSAQISGQCCCCTKPRRSDGQKC*AAGSCR Trigger: CCTACAGGAACCAGCTGCTCAACATTTTTGCCCGTC...TGACCTCCGAGGTTTAGTACAGCAGCAGCACTGACCACTTATCTGTGCACTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | CTGACAGAGAACAGTGAGCTGGACTGCTTTTCAGGTTCGGAAGGTGTACTTATGAGTGCAGGAGGATGCTaGACTGGACCACTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LTENSELDCFSGSEGVLMSAGGC*TGPLPQ Trigger: CTGAGGAAGTGGTCCAGTCCAGCATCCTCCTGCACT...CATAAGTACACCTTCCGAACCTGAAAAGCAGTCCAGCTCACTGTTCTCTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | ACAGTGTTCTTAGTGCCCTGTGGTTTGATTGGGCCCCTCATGGAGCTGTGGGTGCTTCTAACTTGCTTGTaGCAGGCCCGTTCACATAAT | + |
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Preference number: 4 (lower is better) Translates to: TVFLVPCGLIGPLMELWVLLTCL*QARSHN Trigger: ATTATGTGAACGGGCCTGCCACAAGCAAGTTAGAAG...CACCCACAGCTCCATGAGGGGCCCAATCAAACCACAGGGCACTAAGAACACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR TCA 90 bp | CGTCCTTGGTTTTATACACACCCAACACACAGTGTTCTTAGTGCCCTGTGGTTTTGTAGGCAGAGCACATaGGGAGGGCGATATGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: RPWFYTHPTHSVLSALWFCRQST*GGRYVR Trigger: CCGAACATATCGCCCTCCTCATGTGCTCTGCCTACA...AAACCACAGGGCACTAAGAACACTGTGTGTTGGGTGTGTATAAAACCAAGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | CGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAAGGTTGTAGCTTTTGAATaGCTTCTTCATTCACACACA | + |
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Preference number: 4 (lower is better) Translates to: RHSHALLLLAEAWLRGLKVVAFE*LLHSHT Trigger: TGTGTGTGAATGAAGAAGGCATTCAAAAGCTACAAC...CTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | GAACACGCACCAGTGTCCCTTCTTCAGTGCACAGATAAGTGGTCAGTGCTGCTGGGGCGTCAAAGTCCATaGATAGCTGGTTTTGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: EHAPVSLLQCTDKWSVLLGRQSP*IAGFEV Trigger: TACTTCAAAACCAGCTATCCATGGACTTTGACGCCC...CAGCAGCACTGACCACTTATCTGTGCACTGAAGAAGGGACACTGGTGCGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR CAA 72 bp | TCTGCTGCCCAAGAAATGTTTTCAAGACTCCTTTATTaGACAACACAGTGCCACGAATGCCGGCCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SAAQEMFSRLLY*TTQCHECRPAA Trigger: GGCTGCTGGCCGGCATTCGTGGCACTGTGTTGTCAAATAAAGGAGTCTTGAAAACATTTCTTGGGCAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | TATACACACCCAACACACAGTGTTCTTAGTGCCCTGTGGTTTGATTGGGCCCCTGCATTTCTTCTAACTTaGTTGTGGCAGGCCCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: YTHPTHSVLSALWFDWAPAFLLT*LWQARS Trigger: TGAACGGGCCTGCCACAAGCAAGTTAGAAGAAATGC...AGGGGCCCAATCAAACCACAGGGCACTAAGAACACTGTGTGTTGGGTGTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| 3UTR CAA 72 bp | AGGAGACAGACGTCACATCTTCCTCTCAGTGCCCATTaGTGGCAGAGTAAGTCCTTTGTGACTGTCACTATG | + |
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Preference number: 4 (lower is better) Translates to: RRQTSHLPLSAH*WQSKSFVTVTM Trigger: CATAGTGACAGTCACAAAGGACTTACTCTGCCACAAATGGGCACTGAGAGGAAGATGTGACGTCTGTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | TTGTGGCAGAGTAAGTCCTTTGTGACTGTCACTATGGAACTGTGTTTTCTACAACCTCGAGGATCTCACTaGCTTCCTCTCGGAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: LWQSKSFVTVTMELCFLQPRGSH*LPLGGH Trigger: ATGTCCTCCGAGAGGAAGCCAGTGAGATCCTCGAGG...TTGTAGAAAACACAGTTCCATAGTGACAGTCACAAAGGACTTACTCTGCCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | CGTCCTTGGTTTTATACACACCCAACACACAGTGTTCTTAGTGCCCTGTGGTTTATTTTCAGAACCACCTaGTCTTTGACAAGGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RPWFYTHPTHSVLSALWFIFRTT*SLTRLA Trigger: GGCCAGCCTTGTCAAAGACCAGGTGGTTCTGAAAAT...AAACCACAGGGCACTAAGAACACTGTGTGTTGGGTGTGTATAAAACCAAGGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | CTGACAGAGAACAGTGAGCTGGACTGCTTTTCAGGTTCGGAAGGTGTACTTATGCGAAGTACACATGGATaGTTCCAAAGTTCTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LTENSELDCFSGSEGVLMRSTHG*FQSSQR Trigger: TCTCTGAGAACTTTGGAAGCATCCATGTGTACTTCG...CATAAGTACACCTTCCGAACCTGAAAAGCAGTCCAGCTCACTGTTCTCTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | GAGAACAGTGAGCTGGACTGCTTTTCAGGTTCGGAAGGTGTACTTATGCAGAACCATCTGAAAACACATTaGGGAGGAAGGAAAAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: ENSELDCFSGSEGVLMQNHLKTH*GGRKSN Trigger: GTTGCTTTTCCTTCCTCCGCAATGTGTTTTCAGATG...GTTCTGCATAAGTACACCTTCCGAACCTGAAAAGCAGTCCAGCTCACTGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR GCA 90 bp | CGTCCTTGGTTTTATACACACCCAACACACAGTGTTCTTAGTGCCCTGTGGTTTGCTAAGGCATTTTTCTaGAGTTCAGAAGACAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: RPWFYTHPTHSVLSALWFAKAFF*SSEDSA Trigger: TGCGCTGTCTTCTGAACTGCAGAAAAATGCCTTAGC...AAACCACAGGGCACTAAGAACACTGTGTGTTGGGTGTGTATAAAACCAAGGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CCA 90 bp | CTGAGCTCTGCTGCCCAAGAAATGTTTTCAAGACTCCTTTATTTGACAACACAGATAACTGATGCTAATTaGGACAAAGTAGGTATCGAA | + |
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Preference number: 4 (lower is better) Translates to: LSSAAQEMFSRLLYLTTQITDAN*DKVGIE Trigger: TTCGATACCTACTTTGTCCCAATTAGCATCAGTTAT...CTGTGTTGTCAAATAAAGGAGTCTTGAAAACATTTCTTGGGCAGCAGAGCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CAA 90 bp | TTTGACAACACAGTGCCACGAATGCCGGCCAGCAGCCATCACGGTGGGAGGGTCTTGATGTCCCCTGGCTaGCAGGGAGTGATCCCCCTA | + |
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Preference number: 5 (lower is better) Translates to: FDNTVPRMPASSHHGGRVLMSPG*QGVIPL Trigger: TAGGGGGATCACTCCCTGCAAGCCAGGGGACATCAA...GACCCTCCCACCGTGATGGCTGCTGGCCGGCATTCGTGGCACTGTGTTGTCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CAA 90 bp | CACTCCCATGCTCTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAAGGAGAGCATTTCTTCTAACTaGCTTGTGGCAGGCCCGTTC | + |
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Preference number: 5 (lower is better) Translates to: HSHALLLLAEAWLRGLKESISSN*LVAGPF Trigger: GAACGGGCCTGCCACAAGCAAGTTAGAAGAAATGCT...CTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAGAGCATGGGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS TCA 90 bp | GCTTCTGAGGGATGCATCTTGGCACCAAGTTATACGTGTTCCGATTaGGCCGCCCTGCAGCTAGAGAACGCAGTGATACAGGGTCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: ASEGCILAPSYTCSD*AALQLENAVIQGLR Trigger: TCGGAGACCCTGTATCACTGCGTTCTCTAGCTGCAGGGCGGCTCAATCGGAACACGTATAACTTGGTGCCAAGATGCATCCCTCAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS-3UTR CAA 90 bp | CACGGTGGGAGGGTCACACCGACACTCCCATGCTCTCCTCCTCCTGGCAGAAGCCACTTCATTGCAAATTaGAAGTCACTGATGTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: HGGRVTPTLPCSPPPGRSHFIAN*KSLMCL Trigger: GAGACACATCAGTGACTTCAAATTTGCAATGAAGTG...GCTTCTGCCAGGAGGAGGAGAGCATGGGAGTGTCGGTGTGACCCTCCCACCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS CCA 90 bp | CTCAGAACAAAGGCAAAGAACCGAATGGCTCCTATGCGCAGTTTGTaGCTCATCTCCTCGAGGATCTCACTGGCTTCCTCTCGGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: LRTKAKNRMAPMRSL*LISSRISLASSRRT Trigger: TGTCCTCCGAGAGGAAGCCAGTGAGATCCTCGAGGAGATGAGCCACAAACTGCGCATAGGAGCCATTCGGTTCTTTGCCTTTGTTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCCTCCTGGCAGAAGCATGGCTCAGAGGTCTCAAGGAGACAGACGTCACAACTTCCTCAGGAAGTTaGTTATCAGGCCAAAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLLLAEAWLRGLKETDVTTSSGS*LSGQSR Trigger: CCTGCTTTGGCCTGATAACAAACTTCCTGAGGAAGT...TGTGACGTCTGTCTCCTTGAGACCTCTGAGCCATGCTTCTGCCAGGAGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CAA 90 bp | TGTGGGTGGGAACACGCACCAGTGTCCCTTCTTCAGTGCACAGATAAGTGGTCAAGAACCACCTGGTCTTaGACAAGGCTGGCCAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: CGWEHAPVSLLQCTDKWSRTTWS*TRLARL Trigger: TAACCTGGCCAGCCTTGTCAAAGACCAGGTGGTTCT...TGACCACTTATCTGTGCACTGAAGAAGGGACACTGGTGCGTGTTCCCACCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS TCA 90 bp | CCAGGTTTTCAATCTGCAGAAGCTGCATCTTATAGGCGACCTCAGTaGCAAAGGCTTGCACGTCCTCAGGCTGCTTCTGAGGGATGCATC | + |
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Preference number: 5 (lower is better) Translates to: PGFQSAEAASYRRPQ*QRLARPQAASEGCI Trigger: GATGCATCCCTCAGAAGCAGCCTGAGGACGTGCAAGCCTTTGTCACTGAGGTCGCCTATAAGATGCAGCTTCTGCAGATTGAAAACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS TCA 90 bp | GCGCATCGTAACACTGAGAGGAGCCTTGATCCAGAAGCTGACGGGTaGACTTCCTGGCTGCAACCAAGTATTCCTTCTCACCGAAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: AHRNTERSLDPEADG*TSWLQPSIPSHRSS Trigger: ACTACTTCGGTGAGAAGGAATACTTGGTTGCAGCCAGGAAGTTCACCCGTCAGCTTCTGGATCAAGGCTCCTCTCAGTGTTACGATGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS CCA 90 bp | CCGTTGACCACTTGTGAGCTTCCAGAGTTCATTTTCAGAACCACCTaGTCTTTGACAAGGCTGGCCAGGTTAGAGTGCAGGAGGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLTTCELPEFIFRTT*SLTRLARLECRRML Trigger: CAGCATCCTCCTGCACTCTAACCTGGCCAGCCTTGTCAAAGACCAGGTGGTTCTGAAAATGAACTCTGGAAGCTCACAAGTGGTCAACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS-3UTR CAA 90 bp | TGGAGCTGTGGGTGGGAACACGCACCAGTGTCCCTTCTTCAGTGCACAGATAAGTGGCTGGTTTTCCTATaGGCTTCTTACATCCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: WSCGWEHAPVSLLQCTDKWLVFL*ASYIRA Trigger: TGCTCGGATGTAAGAAGCCAATAGGAAAACCAGCCA...CTTATCTGTGCACTGAAGAAGGGACACTGGTGCGTGTTCCCACCCACAGCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS TCA 90 bp | CATGAGGAGGGCGATATGTTCGGGCACAAGCCCGTTGACCACTTGTaGGCTTCCAGAGTTCATTTTCAGAACCACCTGGTCTTTGACAAG | + |
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Preference number: 5 (lower is better) Translates to: HEEGDMFGHKPVDHL*ASRVHFQNHLVFDK Trigger: CTTGTCAAAGACCAGGTGGTTCTGAAAATGAACTCTGGAAGCTCACAAGTGGTCAACGGGCTTGTGCCCGAACATATCGCCCTCCTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGTGGGAACACGCACCAGTGTCCCTTCTTCAGTGCACAGATAAGTGGTCATCATCTGAAAACACATaGCGGAGGAAGGAAAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: CGWEHAPVSLLQCTDKWSSSENT*RRKEKQ Trigger: TTGCTTTTCCTTCCTCCGCAATGTGTTTTCAGATGA...TGACCACTTATCTGTGCACTGAAGAAGGGACACTGGTGCGTGTTCCCACCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS-3UTR CAA 90 bp | CTGAGCTCTGCTGCCCAAGAAATGTTTTCAAGACTCCTTTATTTGACAACACAGCTCAGTGACAAAGGCTaGCACGTCCTCAGGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LSSAAQEMFSRLLYLTTQLSDKG*HVLRLL Trigger: AAGCAGCCTGAGGACGTGCAAGCCTTTGTCACTGAG...CTGTGTTGTCAAATAAAGGAGTCTTGAAAACATTTCTTGGGCAGCAGAGCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS GCA 90 bp | TCCAGTGGTGGACTCCTTCGGCTTAGGAACTCCGAGGATCTCATATaGATAAAGACTCTCTTCCAATATTTTATCATAACTGATGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: SSGGLLRLRNSEDLI*IKTLFQYFIITDAN Trigger: ATTAGCATCAGTTATGATAAAATATTGGAAGAGAGTCTTTATGCATATGAGATCCTCGGAGTTCCTAAGCCGAAGGAGTCCACCACTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS GCA 90 bp | CTGGTTTTCCTATTGGCTTCTTACATCCGAGCATTTCTTCTAACTTaGTTGTGGCAGGCCCGTTCACATAATACACATACTTACTATCTA | + |
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Preference number: 5 (lower is better) Translates to: LVFLLASYIRAFLLT*LWQARSHNTHTYYL Trigger: TAGATAGTAAGTATGTGTATTATGTGAACGGGCCTGCCACAAGCAAGTTAGAAGAAATGCTCGGATGTAAGAAGCCAATAGGAAAACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS CCA 72 bp | TGCGCAGTTTGTGGCTCATCTCCTCGAGGATCTCACTaGCTTCCTCTCGGAGGACATCCACACCTGTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: CAVCGSSPRGSH*LPLGGHPHLSA Trigger: CGCTGACAGGTGTGGATGTCCTCCGAGAGGAAGCCAGTGAGATCCTCGAGGAGATGAGCCACAAACTGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS GCA 72 bp | ACCACCTGGTCTTTGACAAGGCTGGCCAGGTTAGAGTaGAGGAGGATGCTGGACTGGACCACTTCCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: TTWSLTRLARLE*RRMLDWTTSSG Trigger: TCCTGAGGAAGTGGTCCAGTCCAGCATCCTCCTGCACTCTAACCTGGCCAGCCTTGTCAAAGACCAGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 72 bp | AGGAGGATGCTGGACTGGACCACTTCCTCAGGAAGTTaGTTATCAGGCCAAAGCAGGAACCCGCCGAACACC | + |
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Preference number: 6 (lower is better) Translates to: RRMLDWTTSSGS*LSGQSRNPPNT Trigger: GGTGTTCGGCGGGTTCCTGCTTTGGCCTGATAACAAACTTCCTGAGGAAGTGGTCCAGTCCAGCATCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 90 bp | TTAGAGTGCAGGAGGATGCTGGACTGGACCACTTCCTCAGGAAGTTaGTTATCAGGCCAAAGCAGGAACCCGCCGAACACCTGGGTTACG | + |
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Preference number: 6 (lower is better) Translates to: LECRRMLDWTTSSGS*LSGQSRNPPNTWVT Trigger: CGTAACCCAGGTGTTCGGCGGGTTCCTGCTTTGGCCTGATAACAAACTTCCTGAGGAAGTGGTCCAGTCCAGCATCCTCCTGCACTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS GCA 72 bp | CTGAAGACATCCTCTTTCCTGAGCCCAGGTGTCATGTaGAAAGCCAGGGCGACTAAGGAAGGACGGGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: LKTSSFLSPGVM*KARATKEGRAK Trigger: TTTTGCCCGTCCTTCCTTAGTCGCCCTGGCTTTGCACATGACACCTGGGCTCAGGAAAGAGGATGTCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CCA 72 bp | AGGCTGGCCAGGTTAGAGTGCAGGAGGATGCTGGACTaGACCACTTCCTCAGGAAGTTTGTTATCAGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: RLARLECRRMLD*TTSSGSLLSGQ Trigger: TTGGCCTGATAACAAACTTCCTGAGGAAGTGGTCCAGTCCAGCATCCTCCTGCACTCTAACCTGGCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 90 bp | TTGCTCAGAACAAAGGCAAAGAACCGAATGGCTCCTATGCGCAGTTaGTGGCTCATCTCCTCGAGGATCTCACTGGCTTCCTCTCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LLRTKAKNRMAPMRS*WLISSRISLASSRR Trigger: CCTCCGAGAGGAAGCCAGTGAGATCCTCGAGGAGATGAGCCACAAACTGCGCATAGGAGCCATTCGGTTCTTTGCCTTTGTTCTGAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS TCA 72 bp | GGATGCATCTTGGCACCAAGTTATACGTGTTCCGATTaGGCCGCCCTGCAGCTAGAGAACGCAGTGATACAG | + |
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Preference number: 6 (lower is better) Translates to: GCILAPSYTCSD*AALQLENAVIQ Trigger: CTGTATCACTGCGTTCTCTAGCTGCAGGGCGGCTCAATCGGAACACGTATAACTTGGTGCCAAGATGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS TCA 72 bp | CAATCTGCAGAAGCTGCATCTTATAGGCGACCTCAGTaGCAAAGGCTTGCACGTCCTCAGGCTGCTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: QSAEAASYRRPQ*QRLARPQAASE Trigger: CTCAGAAGCAGCCTGAGGACGTGCAAGCCTTTGTCACTGAGGTCGCCTATAAGATGCAGCTTCTGCAGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CCA 72 bp | AAGGCAAAGAACCGAATGGCTCCTATGCGCAGTTTGTaGCTCATCTCCTCGAGGATCTCACTGGCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: KAKNRMAPMRSL*LISSRISLASS Trigger: AGAGGAAGCCAGTGAGATCCTCGAGGAGATGAGCCACAAACTGCGCATAGGAGCCATTCGGTTCTTTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 72 bp | ACAAAGGCAAAGAACCGAATGGCTCCTATGCGCAGTTaGTGGCTCATCTCCTCGAGGATCTCACTGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TKAKNRMAPMRS*WLISSRISLAS Trigger: GGAAGCCAGTGAGATCCTCGAGGAGATGAGCCACAAACTGCGCATAGGAGCCATTCGGTTCTTTGCCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 72 bp | GGGATGCATCTTGGCACCAAGTTATACGTGTTCCGATaGAGCCGCCCTGCAGCTAGAGAACGCAGTGATACA | + |
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Preference number: 6 (lower is better) Translates to: GMHLGTKLYVFR*SRPAARERSDT Trigger: TGTATCACTGCGTTCTCTAGCTGCAGGGCGGCTCAATCGGAACACGTATAACTTGGTGCCAAGATGCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 72 bp | AAGCTGCATCTTATAGGCGACCTCAGTGACAAAGGCTaGCACGTCCTCAGGCTGCTTCTGAGGGATGCATCT | + |
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Preference number: 6 (lower is better) Translates to: KLHLIGDLSDKG*HVLRLLLRDAS Trigger: AGATGCATCCCTCAGAAGCAGCCTGAGGACGTGCAAGCCTTTGTCACTGAGGTCGCCTATAAGATGCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 90 bp | ACCACTTGTGAGCTTCCAGAGTTCATTTTCAGAACCACCTGGTCTTaGACAAGGCTGGCCAGGTTAGAGTGCAGGAGGATGCTGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: TTCELPEFIFRTTWS*TRLARLECRRMLDW Trigger: CCAGTCCAGCATCCTCCTGCACTCTAACCTGGCCAGCCTTGTCAAAGACCAGGTGGTTCTGAAAATGAACTCTGGAAGCTCACAAGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 90 bp | TTTCTGCAGTTCAGAAGACAGCGCATCGTAACACTGAGAGGAGCCTaGATCCAGAAGCTGACGGGTGAACTTCCTGGCTGCAACCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: FLQFRRQRIVTLRGA*IQKLTGELPGCNQV Trigger: TACTTGGTTGCAGCCAGGAAGTTCACCCGTCAGCTTCTGGATCAAGGCTCCTCTCAGTGTTACGATGCGCTGTCTTCTGAACTGCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS TCA 72 bp | AACACTGAGAGGAGCCTTGATCCAGAAGCTGACGGGTaGACTTCCTGGCTGCAACCAAGTATTCCTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: NTERSLDPEADG*TSWLQPSIPSH Trigger: GTGAGAAGGAATACTTGGTTGCAGCCAGGAAGTTCACCCGTCAGCTTCTGGATCAAGGCTCCTCTCAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS CAA 72 bp | GAGCTTCCAGAGTTCATTTTCAGAACCACCTGGTCTTaGACAAGGCTGGCCAGGTTAGAGTGCAGGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: ELPEFIFRTTWS*TRLARLECRRM Trigger: CATCCTCCTGCACTCTAACCTGGCCAGCCTTGTCAAAGACCAGGTGGTTCTGAAAATGAACTCTGGAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 72 bp | CACATGAGGAGGGCGATATGTTCGGGCACAAGCCCGTaGACCACTTGTGAGCTTCCAGAGTTCATTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HMRRAICSGTSP*TTCELPEFIFR Trigger: TCTGAAAATGAACTCTGGAAGCTCACAAGTGGTCAACGGGCTTGTGCCCGAACATATCGCCCTCCTCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 90 bp | GGTTCCATCACAATATTCAGGAGACCAAACTTAGGAGTCAGGGTCTaGGCAGCTCGGCTCCTCGTCCCTTCGAGGAAAAATTCAACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSITIFRRPNLGVRV*AARLLVPSRKNSTG Trigger: TCCTGTTGAATTTTTCCTCGAAGGGACGAGGAGCCGAGCTGCCAAGACCCTGACTCCTAAGTTTGGTCTCCTGAATATTGTGATGGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS CAA 72 bp | ACAATATTCAGGAGACCAAACTTAGGAGTCAGGGTCTaGGCAGCTCGGCTCCTCGTCCCTTCGAGGAAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: TIFRRPNLGVRV*AARLLVPSRKN Trigger: ATTTTTCCTCGAAGGGACGAGGAGCCGAGCTGCCAAGACCCTGACTCCTAAGTTTGGTCTCCTGAATATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034466.10 ENSMUST00000161986.2 |
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| CDS GCA 72 bp | CTATTGGCTTCTTACATCCGAGCATTTCTTCTAACTTaGTTGTGGCAGGCCCGTTCACATAATACACATACT | + |
|
Preference number: 6 (lower is better) Translates to: LLASYIRAFLLT*LWQARSHNTHT Trigger: AGTATGTGTATTATGTGAACGGGCCTGCCACAAGCAAGTTAGAAGAAATGCTCGGATGTAAGAAGCCAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS CAA 72 bp | TTGGCTTCTTACATCCGAGCATTTCTTCTAACTTGCTaGTGGCAGGCCCGTTCACATAATACACATACTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LASYIRAFLLTC*WQARSHNTHTY Trigger: GTAAGTATGTGTATTATGTGAACGGGCCTGCCACAAGCAAGTTAGAAGAAATGCTCGGATGTAAGAAGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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| CDS CAA 90 bp | GTTTTCCTATTGGCTTCTTACATCCGAGCATTTCTTCTAACTTGCTaGTGGCAGGCCCGTTCACATAATACACATACTTACTATCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: VFLLASYIRAFLLTC*WQARSHNTHTYYLP Trigger: AGGTAGATAGTAAGTATGTGTATTATGTGAACGGGCCTGCCACAAGCAAGTTAGAAGAAATGCTCGGATGTAAGAAGCCAATAGGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034466.10 |
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