Pregenerated sensors for GNMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002769Ensembl transcript IDs: ENSMUST00000002846.9
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGTAGGGGCCATTGCCTaGGCATGGGCTTCTGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TPFARPPHLHPNAISALGVGAIA*AWASGS Trigger: GCTCCCAGAAGCCCATGCTCAGGCAATGGCCCCTAC...CCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR GCA 90 bp | CCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGATTGCGGCCTCCCCATCTaGATACTGGTCCGGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PFARPPHLHPNAISALGDCGLPI*ILVREP Trigger: GGGCTCCCGGACCAGTATGCAGATGGGGAGGCCGCA...ATCCCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR GCA 90 bp | GCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGATGGTCTTCGCTGTGCTGGCACCTaGCCCCAAAGGCTGCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: ARPPHLHPNAISALGDGLRCAGT*PQRLLA Trigger: TGCGAGCAGCCTTTGGGGGCAGGTGCCAGCACAGCG...AAGACCATCCCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CCA 90 bp | CCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGATACGTCCAGCACCCTGTaGCACCCGTGCTGGCGCAAC | + |
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Preference number: 4 (lower is better) Translates to: PFARPPHLHPNAISALGDTSSTL*HPCWRN Trigger: GTTGCGCCAGCACGGGTGCCACAGGGTGCTGGACGT...ATCCCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CCA 90 bp | CCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGATTCCCCATCTGCATACTaGTCCGGGAGCCCTTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PFARPPHLHPNAISALGDSPSAY*SGSPSA Trigger: GGCCGAAGGGCTCCCGGACCAGTATGCAGATGGGGA...ATCCCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR GCA 90 bp | CCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGATCAGGAGAGCCATCTCTaGCAGTGCCTGGCACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PFARPPHLHPNAISALGDQESHL*QCLAPA Trigger: TGCAGGTGCCAGGCACTGGCAGAGATGGCTCTCCTG...ATCCCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CCA 90 bp | TACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGCTGTGGCACCCGTGCTaGCGCAACAGCCCAAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: YSVCPTPTSAPKCNICIRLWHPC*RNSPSN Trigger: GTTGCTTGGGCTGTTGCGCCAGCACGGGTGCCACAG...CCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CCA 90 bp | GTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTCCCAGGACGCTGTGCTaGCACCTGCCCCCAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VYSVCPTPTSAPKCNICIPRTLC*HLPPKA Trigger: AGCCTTTGGGGGCAGGTGCCAGCACAGCGTCCTGGG...AATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR TCA 90 bp | CCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGATCCTCTTCCACCAGCATaGTGGAGTCCACTCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PFARPPHLHPNAISALGDPLPPA*WSPLLC Trigger: GCACAGGAGTGGACTCCATCATGCTGGTGGAAGAGG...ATCCCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR GCA 90 bp | GTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTCCACGCCTTGTACTCTaGGGTACGGCTGCGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VYSVCPTPTSAPKCNICIPRLVL*GTAAGV Trigger: GACACCCGCAGCCGTACCGCAGAGTACAAGGCGTGG...AATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR GCA 90 bp | GTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTTCACCCAGGACGCTGTaGTGGCACCTGCCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VYSVCPTPTSAPKCNICISPRTL*WHLPPK Trigger: CTTTGGGGGCAGGTGCCAGCACAGCGTCCTGGGTGA...AATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR TCA 90 bp | AGACTGTATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAACCACGCTCATCACGCTaGAGCCCTCTTCCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RLYCLLRLPDPHICTQMQPRSSR*SPLPPA Trigger: TGCTGGTGGAAGAGGGCTTCAGCGTGATGAGCGTGG...TTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAATACAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CCA 90 bp | AGACTGTATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAAAGCCGGTGCTCGCTCTaGTCACCTTTGCAGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RLYCLLRLPDPHICTQMQSRCSL*SPLQSG Trigger: GCCAGACTGCAAAGGTGACCAGAGCGAGCACCGGCT...TTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAATACAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR GCA 90 bp | GACTGTATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATAGCCATCTCTGCCAGTaGCTGGCACCTGCACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DCIVYSVCPTPTSAPKCNSHLCQ*LAPALC Trigger: ACACAGTGCAGGTGCCAGGCACTGGCAGAGATGGCT...ATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAATACAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CCA 90 bp | GACTGTATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATTCAGCATCTTGTCGCTaGCGTCCACGCTCATCACGC | + |
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Preference number: 4 (lower is better) Translates to: DCIVYSVCPTPTSAPKCNSASCR*RPRSSR Trigger: GCGTGATGAGCGTGGACGCCAGCGACAAGATGCTGA...ATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAATACAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CCA 90 bp | TGGAGAATGCAGACTGTATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACATCTCTGCCAGTGCCTaGCACCTGCACTGTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: WRMQTVLFTPFARPPHLHISASA*HLHCVV Trigger: GACTACACAGTGCAGGTGCCAGGCACTGGCAGAGAT...GTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAATACAGTCTGCATTCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR TCA 90 bp | GTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTGCGCACAGCCTGTGCTaGGGATATAGTCGTAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VYSVCPTPTSAPKCNICIAHSLC*GYSRSC Trigger: GCAACTACGACTATATCCTCAGCACAGGCTGTGCGC...AATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR TCA 90 bp | GCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGATGGTCTTTGTGGGCTTTGTTGTTaGCTGTCAGTACTGACGTCG | + |
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Preference number: 4 (lower is better) Translates to: ARPPHLHPNAISALGDGLCGLCC*LSVLTS Trigger: CGACGTCAGTACTGACAGTCAACAACAAAGCCCACA...AAGACCATCCCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR TCA 90 bp | AGACTGTATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAAAGAGCCGGAACTTACTaGAGCCAGGAGAGCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: RLYCLLRLPDPHICTQMQRAGTY*SQESHL Trigger: GAGATGGCTCTCCTGGCTTCAGTAAGTTCCGGCTCT...TTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAATACAGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR GCA 90 bp | TGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATCGCTCTGGTCACCTTTaGAGTCTGGCAAGTGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: CLLRLPDPHICTQMQYLHRSGHL*SLASEQ Trigger: TTGCTCACTTGCCAGACTGCAAAGGTGACCAGAGCG...ATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR TCA 90 bp | CCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGATATCAAAGCCATCTCCTaGAAGCACATCTTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFARPPHLHPNAISALGDIKAIS*KHIFVQ Trigger: CTGGACAAAGATGTGCTTTCAGGAGATGGCTTTGAT...ATCCCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR TCA 90 bp | TGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTTGCAGTCTGGCAAGTaGGCAAAACTGTTCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: CLLRLPDPHICTQMQYLHLQSGK*AKLFPR Trigger: CCTTGGGAACAGTTTTGCTCACTTGCCAGACTGCAA...ATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CCA 90 bp | CAGACTGTATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCATCCAGGGTTACCATGTaGGCTTTGTTGTTGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: QTVLFTPFARPPHLHPNASRVTM*ALLLTV Trigger: GACAGTCAACAACAAAGCCCACATGGTAACCCTGGA...TGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAATACAGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CCA 90 bp | ATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCAGACGCCAAACAGTGTaGGTAGTAAGAGAGCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: IVYSVCPTPTSAPKCNICRRQTV*VVREPE Trigger: TTCCGGCTCTCTTACTACCCACACTGTTTGGCGTCT...GCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CCA 90 bp | GACTGTATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATCCAATTGTCAAAGGATaGCTCTTTCCTCCGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: DCIVYSVCPTPTSAPKCNPIVKG*LFPPVP Trigger: TGGAACCGGAGGAAAGAGCCATCCTTTGACAATTGG...ATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAATACAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR TCA 90 bp | GACTGTATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATAGTTGGCTTCTTCAATaGCCCAATTGTCAAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: DCIVYSVCPTPTSAPKCNSWLLQ*PNCQRM Trigger: CATCCTTTGACAATTGGGTCATTGAAGAAGCCAACT...ATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAATACAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CCA 90 bp | CCGATGTACAGCTGCCACACACGTGCGGCCTCCCCATCTGCATACTaGTCCGGGAGCCCTTCGGCCGCCACCCCCAGGGAGCGGGTACGG | + |
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Preference number: 5 (lower is better) Translates to: PMYSCHTRAASPSAY*SGSPSAATPRERVR Trigger: CCGTACCCGCTCCCTGGGGGTGGCGGCCGAAGGGCTCCCGGACCAGTATGCAGATGGGGAGGCCGCACGTGTGTGGCAGCTGTACATCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 90 bp | GGCGCAACAGCCCAAGCAACCACGCCTTGTACTCTGCGGTACGGCTaGGGGTGTCCCCGATGTACAGCTGCCACACACGTGCGGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: GATAQATTPCTLRYG*GCPRCTAATHVRPP Trigger: GGGAGGCCGCACGTGTGTGGCAGCTGTACATCGGGGACACCCGCAGCCGTACCGCAGAGTACAAGGCGTGGTTGCTTGGGCTGTTGCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 90 bp | GCCTTGTACTCTGCGGTACGGCTGCGGGTGTCCCCGATGTACAGCTaGCACACACGTGCGGCCTCCCCATCTGCATACTGGTCCGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: ALYSAVRLRVSPMYS*HTRAASPSAYWSGS Trigger: GCTCCCGGACCAGTATGCAGATGGGGAGGCCGCACGTGTGTGGCAGCTGTACATCGGGGACACCCGCAGCCGTACCGCAGAGTACAAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 90 bp | GCACCCGTGCTGGCGCAACAGCCCAAGCAACCACGCCTTGTACTCTaGGGTACGGCTGCGGGTGTCCCCGATGTACAGCTGCCACACACG | + |
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Preference number: 5 (lower is better) Translates to: APVLAQQPKQPRLVL*GTAAGVPDVQLPHT Trigger: CGTGTGTGGCAGCTGTACATCGGGGACACCCGCAGCCGTACCGCAGAGTACAAGGCGTGGTTGCTTGGGCTGTTGCGCCAGCACGGGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CCA 90 bp | ACTCCTGTGCCACAGGCTACGTCCAGCACCCTGTGGCACCCGTGCTaGCGCAACAGCCCAAGCAACCACGCCTTGTACTCTGCGGTACGG | + |
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Preference number: 5 (lower is better) Translates to: TPVPQATSSTLWHPC*RNSPSNHALYSAVR Trigger: CCGTACCGCAGAGTACAAGGCGTGGTTGCTTGGGCTGTTGCGCCAGCACGGGTGCCACAGGGTGCTGGACGTAGCCTGTGGCACAGGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 90 bp | TCCACTCCTGTGCCACAGGCTACGTCCAGCACCCTGTGGCACCCGTaGTGGCGCAACAGCCCAAGCAACCACGCCTTGTACTCTGCGGTA | + |
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Preference number: 5 (lower is better) Translates to: STPVPQATSSTLWHP*WRNSPSNHALYSAV Trigger: TACCGCAGAGTACAAGGCGTGGTTGCTTGGGCTGTTGCGCCAGCACGGGTGCCACAGGGTGCTGGACGTAGCCTGTGGCACAGGAGTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 90 bp | CGTAGTTGCGGTGGTCGATCACCAGCAGGCCCCCGGGCCGCACCATaGTTGCAATGTTCTTTAGTGCCAGCCGGTGCTCGCTCTGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: RSCGGRSPAGPRAAP*LQCSLVPAGARSGH Trigger: GTGACCAGAGCGAGCACCGGCTGGCACTAAAGAACATTGCAAGCATGGTGCGGCCCGGGGGCCTGCTGGTGATCGACCACCGCAACTACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CCA 90 bp | ATGATGGAGTCCACTCCTGTGCCACAGGCTACGTCCAGCACCCTGTaGCACCCGTGCTGGCGCAACAGCCCAAGCAACCACGCCTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: MMESTPVPQATSSTL*HPCWRNSPSNHALY Trigger: GTACAAGGCGTGGTTGCTTGGGCTGTTGCGCCAGCACGGGTGCCACAGGGTGCTGGACGTAGCCTGTGGCACAGGAGTGGACTCCATCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS TCA 90 bp | CACTCTTATAGTAGATGTTCTTCCCCGGGGGCGCACAGCCTGTGCTaGGGATATAGTCGTAGTTGCGGTGGTCGATCACCAGCAGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: HSYSRCSSPGAHSLC*GYSRSCGGRSPAGP Trigger: GGGGCCTGCTGGTGATCGACCACCGCAACTACGACTATATCCTCAGCACAGGCTGTGCGCCCCCGGGGAAGAACATCTACTATAAGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CCA 90 bp | GAGCCGGAACTTACTGAAGCCAGGAGAGCCATCTCTGCCAGTGCCTaGCACCTGCACTGTGTAGTCCAGGGTTACCATGTGGGCTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: EPELTEARRAISASA*HLHCVVQGYHVGFV Trigger: AACAAAGCCCACATGGTAACCCTGGACTACACAGTGCAGGTGCCAGGCACTGGCAGAGATGGCTCTCCTGGCTTCAGTAAGTTCCGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CCA 90 bp | CCCAAAGGCTGCTCGCACCAACTCCGTGAAAGACGCCAAACAGTGTaGGTAGTAAGAGAGCCGGAACTTACTGAAGCCAGGAGAGCCATC | + |
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Preference number: 5 (lower is better) Translates to: PKGCSHQLRERRQTV*VVREPELTEARRAI Trigger: GATGGCTCTCCTGGCTTCAGTAAGTTCCGGCTCTCTTACTACCCACACTGTTTGGCGTCTTTCACGGAGTTGGTGCGAGCAGCCTTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CAA 90 bp | ACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGCATATTTCAGCATCTaGTCGCTGGCGTCCACGCTC | + |
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Preference number: 5 (lower is better) Translates to: TPFARPPHLHPNAISALGAYFSI*SLASTL Trigger: GAGCGTGGACGCCAGCGACAAGATGCTGAAATATGC...CCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CAA 90 bp | ATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCCGGGCCGCACCATGCTaGCAATGTTCTTTAGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: IVYSVCPTPTSAPKCNICRAAPC*QCSLVP Trigger: TGGCACTAAAGAACATTGCAAGCATGGTGCGGCCCG...GCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CAA 90 bp | TGCCCGACCCCCACATCTGCACCCAAATGCAATATCTGCATTAGGGGATGGTCTACCATGTGGGCTTTGTaGTTGACTGTCAGTACTGAC | + |
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Preference number: 5 (lower is better) Translates to: CPTPTSAPKCNICIRGWSTMWAL*LTVSTD Trigger: GTCAGTACTGACAGTCAACAACAAAGCCCACATGGT...AGACCATCCCCTAATGCAGATATTGCATTTGGGTGCAGATGTGGGGGTCGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS-3UTR CAA 90 bp | GACTGTATTGTTTACTCCGTTTGCCCGACCCCCACATCTGCACCCAAATGCAATGTTACCATGTGGGCTTaGTTGTTGACTGTCAGTACT | + |
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Preference number: 5 (lower is better) Translates to: DCIVYSVCPTPTSAPKCNVTMWA*LLTVST Trigger: AGTACTGACAGTCAACAACAAAGCCCACATGGTAAC...ATTGCATTTGGGTGCAGATGTGGGGGTCGGGCAAACGGAGTAAACAATACAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS TCA 90 bp | GTAGTCCAGGGTTACCATGTGGGCTTTGTTGTTGACTGTCAGTACTaGCGTCGTAATGTCCTTGGTCAGGTCACTCTTATAGTAGATGTT | + |
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Preference number: 5 (lower is better) Translates to: VVQGYHVGFVVDCQY*RRNVLGQVTLIVDV Trigger: AACATCTACTATAAGAGTGACCTGACCAAGGACATTACGACGTCAGTACTGACAGTCAACAACAAAGCCCACATGGTAACCCTGGACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 72 bp | GATGTACAGCTGCCACACACGTGCGGCCTCCCCATCTaGATACTGGTCCGGGAGCCCTTCGGCCGCCACCCC | + |
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Preference number: 6 (lower is better) Translates to: DVQLPHTCGLPI*ILVREPFGRHP Trigger: GGGGTGGCGGCCGAAGGGCTCCCGGACCAGTATGCAGATGGGGAGGCCGCACGTGTGTGGCAGCTGTACATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CAA 72 bp | CACCCGTGCTGGCGCAACAGCCCAAGCAACCACGCCTaGTACTCTGCGGTACGGCTGCGGGTGTCCCCGATG | + |
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Preference number: 6 (lower is better) Translates to: HPCWRNSPSNHA*YSAVRLRVSPM Trigger: CATCGGGGACACCCGCAGCCGTACCGCAGAGTACAAGGCGTGGTTGCTTGGGCTGTTGCGCCAGCACGGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CAA 90 bp | ACCCTGTGGCACCCGTGCTGGCGCAACAGCCCAAGCAACCACGCCTaGTACTCTGCGGTACGGCTGCGGGTGTCCCCGATGTACAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TLWHPCWRNSPSNHA*YSAVRLRVSPMYSC Trigger: GCAGCTGTACATCGGGGACACCCGCAGCCGTACCGCAGAGTACAAGGCGTGGTTGCTTGGGCTGTTGCGCCAGCACGGGTGCCACAGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 72 bp | TCTGCGGTACGGCTGCGGGTGTCCCCGATGTACAGCTaGCACACACGTGCGGCCTCCCCATCTGCATACTGG | + |
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Preference number: 6 (lower is better) Translates to: SAVRLRVSPMYS*HTRAASPSAYW Trigger: CCAGTATGCAGATGGGGAGGCCGCACGTGTGTGGCAGCTGTACATCGGGGACACCCGCAGCCGTACCGCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 72 bp | GTGCCACAGGCTACGTCCAGCACCCTGTGGCACCCGTaGTGGCGCAACAGCCCAAGCAACCACGCCTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: VPQATSSTLWHP*WRNSPSNHALY Trigger: GTACAAGGCGTGGTTGCTTGGGCTGTTGCGCCAGCACGGGTGCCACAGGGTGCTGGACGTAGCCTGTGGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 72 bp | GGTGGTCGATCACCAGCAGGCCCCCGGGCCGCACCATaGTTGCAATGTTCTTTAGTGCCAGCCGGTGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: GGRSPAGPRAAP*LQCSLVPAGAR Trigger: GCGAGCACCGGCTGGCACTAAAGAACATTGCAAGCATGGTGCGGCCCGGGGGCCTGCTGGTGATCGACCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 72 bp | GCCCAAGCAACCACGCCTTGTACTCTGCGGTACGGCTaGGGGTGTCCCCGATGTACAGCTGCCACACACGTG | + |
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Preference number: 6 (lower is better) Translates to: AQATTPCTLRYG*GCPRCTAATHV Trigger: CACGTGTGTGGCAGCTGTACATCGGGGACACCCGCAGCCGTACCGCAGAGTACAAGGCGTGGTTGCTTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS GCA 72 bp | CTGGCGCAACAGCCCAAGCAACCACGCCTTGTACTCTaGGGTACGGCTGCGGGTGTCCCCGATGTACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LAQQPKQPRLVL*GTAAGVPDVQL Trigger: CAGCTGTACATCGGGGACACCCGCAGCCGTACCGCAGAGTACAAGGCGTGGTTGCTTGGGCTGTTGCGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CCA 72 bp | CCACAGGCTACGTCCAGCACCCTGTGGCACCCGTGCTaGCGCAACAGCCCAAGCAACCACGCCTTGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: PQATSSTLWHPC*RNSPSNHALYS Trigger: AGAGTACAAGGCGTGGTTGCTTGGGCTGTTGCGCCAGCACGGGTGCCACAGGGTGCTGGACGTAGCCTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CAA 72 bp | GGTCGATCACCAGCAGGCCCCCGGGCCGCACCATGCTaGCAATGTTCTTTAGTGCCAGCCGGTGCTCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GRSPAGPRAAPC*QCSLVPAGARS Trigger: AGAGCGAGCACCGGCTGGCACTAAAGAACATTGCAAGCATGGTGCGGCCCGGGGGCCTGCTGGTGATCGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CAA 90 bp | AGTTGCGGTGGTCGATCACCAGCAGGCCCCCGGGCCGCACCATGCTaGCAATGTTCTTTAGTGCCAGCCGGTGCTCGCTCTGGTCACCTT | + |
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Preference number: 6 (lower is better) Translates to: SCGGRSPAGPRAAPC*QCSLVPAGARSGHL Trigger: AAGGTGACCAGAGCGAGCACCGGCTGGCACTAAAGAACATTGCAAGCATGGTGCGGCCCGGGGGCCTGCTGGTGATCGACCACCGCAACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CAA 72 bp | CGGTTCCAGCGCTCCTTAAGCGCATATTTCAGCATCTaGTCGCTGGCGTCCACGCTCATCACGCTGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RFQRSLSAYFSI*SLASTLITLKP Trigger: GGGCTTCAGCGTGATGAGCGTGGACGCCAGCGACAAGATGCTGAAATATGCGCTTAAGGAGCGCTGGAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CAA 90 bp | TCTTTCCTCCGGTTCCAGCGCTCCTTAAGCGCATATTTCAGCATCTaGTCGCTGGCGTCCACGCTCATCACGCTGAAGCCCTCTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SFLRFQRSLSAYFSI*SLASTLITLKPSST Trigger: GGTGGAAGAGGGCTTCAGCGTGATGAGCGTGGACGCCAGCGACAAGATGCTGAAATATGCGCTTAAGGAGCGCTGGAACCGGAGGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CCA 72 bp | TGCTCGCACCAACTCCGTGAAAGACGCCAAACAGTGTaGGTAGTAAGAGAGCCGGAACTTACTGAAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CSHQLRERRQTV*VVREPELTEAR Trigger: CCTGGCTTCAGTAAGTTCCGGCTCTCTTACTACCCACACTGTTTGGCGTCTTTCACGGAGTTGGTGCGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CCA 72 bp | CCAGTTGGCTTCTTCAATGACCCAATTGTCAAAGGATaGCTCTTTCCTCCGGTTCCAGCGCTCCTTAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PVGFFNDPIVKG*LFPPVPALLKR Trigger: GCGCTTAAGGAGCGCTGGAACCGGAGGAAAGAGCCATCCTTTGACAATTGGGTCATTGAAGAAGCCAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS TCA 72 bp | CATCTTTGTCCAGCGTCAACCAGTTGGCTTCTTCAATaGCCCAATTGTCAAAGGATGGCTCTTTCCTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: HLCPASTSWLLQ*PNCQRMALSSG Trigger: ACCGGAGGAAAGAGCCATCCTTTGACAATTGGGTCATTGAAGAAGCCAACTGGTTGACGCTGGACAAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CAA 90 bp | CCAAGGCAGATGACAGCATCAAAGCCATCTCCTGAAAGCACATCTTaGTCCAGCGTCAACCAGTTGGCTTCTTCAATGACCCAATTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PRQMTASKPSPESTS*SSVNQLASSMTQLS Trigger: TGACAATTGGGTCATTGAAGAAGCCAACTGGTTGACGCTGGACAAAGATGTGCTTTCAGGAGATGGCTTTGATGCTGTCATCTGCCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CAA 90 bp | TCAAAGCCATCTCCTGAAAGCACATCTTTGTCCAGCGTCAACCAGTaGGCTTCTTCAATGACCCAATTGTCAAAGGATGGCTCTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SKPSPESTSLSSVNQ*ASSMTQLSKDGSFL Trigger: GAGGAAAGAGCCATCCTTTGACAATTGGGTCATTGAAGAAGCCAACTGGTTGACGCTGGACAAAGATGTGCTTTCAGGAGATGGCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CAA 72 bp | TCTCCTGAAAGCACATCTTTGTCCAGCGTCAACCAGTaGGCTTCTTCAATGACCCAATTGTCAAAGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: SPESTSLSSVNQ*ASSMTQLSKDG Trigger: GCCATCCTTTGACAATTGGGTCATTGAAGAAGCCAACTGGTTGACGCTGGACAAAGATGTGCTTTCAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS CAA 72 bp | ATGACAGCATCAAAGCCATCTCCTGAAAGCACATCTTaGTCCAGCGTCAACCAGTTGGCTTCTTCAATGACC | + |
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Preference number: 6 (lower is better) Translates to: MTASKPSPESTS*SSVNQLASSMT Trigger: GGTCATTGAAGAAGCCAACTGGTTGACGCTGGACAAAGATGTGCTTTCAGGAGATGGCTTTGATGCTGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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| CDS TCA 72 bp | GGTTACCATGTGGGCTTTGTTGTTGACTGTCAGTACTaGCGTCGTAATGTCCTTGGTCAGGTCACTCTTATA | + |
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Preference number: 6 (lower is better) Translates to: GYHVGFVVDCQY*RRNVLGQVTLI Trigger: TATAAGAGTGACCTGACCAAGGACATTACGACGTCAGTACTGACAGTCAACAACAAAGCCCACATGGTAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002846.9 |
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