Pregenerated sensors for GNL3L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025266Ensembl transcript IDs: ENSMUST00000026297.12, ENSMUST00000112691.9, ENSMUST00000124022.8, ENSMUST00000154393.8
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTATGCAGCCCTGGCTATCCTGGAACTTGCTCGGTAGACCAGGCTaGCCTGAAACTCACGAGATTCATCTGCCTCTGCCTCCAGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: SMQPWLSWNLLGRPG*PETHEIHLPLPPEC Trigger: GCACTCTGGAGGCAGAGGCAGATGAATCTCGTGAGTTTCAGGCCAGCCTGGTCTACCGAGCAAGTTCCAGGATAGCCAGGGCTGCATAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR GCA 90 bp | ACTTGCTCGGTAGACCAGGCTGGCCTGAAACTCACGAGATTCATCTaGCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: TCSVDQAGLKLTRFI*LCLQSARIKGVCPA Trigger: AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCTCGTGAGTTTCAGGCCAGCCTGGTCTACCGAGCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR GCA 90 bp | TGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTGGACTCTaGTTATTTGTTTTGGGCTGTTTTGTTGAGAAAGGGTCTTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: CLQSARIKGVCPAGL*LFVLGCFVEKGSCQ Trigger: CTGGCAAGACCCTTTCTCAACAAAACAGCCCAAAACAAATAAGCAGAGTCCAGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR TCA 90 bp | TGTATGCCCAGCTGGACTCTGCTTATTTGTTTTGGGCTGTTTTGTTaGGAAAGGGTCTTGCCAGATAGTTCAGGCTGGCCCATAACTTAC | + |
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Preference number: 1 (lower is better) Translates to: CMPSWTLLICFGLFC*ERVLPDSSGWPITY Trigger: GTAAGTTATGGGCCAGCCTGAACTATCTGGCAAGACCCTTTCTCAACAAAACAGCCCAAAACAAATAAGCAGAGTCCAGCTGGGCATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR GCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATaGCCAGCTGGACTCTGCTTATTTGTTTTGGGCTGTTTTGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: RFICLCLQSARIKGV*PAGLCLFVLGCFVE Trigger: CTCAACAAAACAGCCCAAAACAAATAAGCAGAGTCCAGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR CCA 90 bp | TGGACTCAGCTTCAGACATCTTCCTGCTTCAGCATTCTTAGTGCTTaGAGCACTGGTGTGAGCCACCCACCTGGTTTTAGTTCTATTTTA | + |
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Preference number: 1 (lower is better) Translates to: WTQLQTSSCFSILSA*STGVSHPPGFSSIL Trigger: TAAAATAGAACTAAAACCAGGTGGGTGGCTCACACCAGTGCTCCAAGCACTAAGAATGCTGAAGCAGGAAGATGTCTGAAGCTGAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR TCA 90 bp | ATTAGAGTTAGAATATCTAAAGTCCCACATTATTTTGTTTCGCCCTaGGACTGCCTCTTACTCTGCAGCCCAGGCTGGACTCAGCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: IRVRISKVPHYFVSP*DCLLLCSPGWTQLQ Trigger: CTGAAGCTGAGTCCAGCCTGGGCTGCAGAGTAAGAGGCAGTCTCAGGGCGAAACAAAATAATGTGGGACTTTAGATATTCTAACTCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR GCA 90 bp | AGCTCCAGTCTCCCAAGTGTCAGGGTTATAGATATGTTGCCACCATaGCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: SSSLPSVRVIDMLPP*QESADFIYLRKHSG Trigger: CCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATGGTGGCAACATATCTATAACCCTGACACTTGGGAGACTGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR GCA 90 bp | GTGAAAGTTAAAGGTGGTAACTGTTTCTCATTGTTTAGTAGTTTGTaGTCAGCCCCTAACCGTCCAGAAAACAGGTACGGTCTACATTTC | + |
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Preference number: 1 (lower is better) Translates to: VKVKGGNCFSLFSSL*SAPNRPENRYGLHF Trigger: GAAATGTAGACCGTACCTGTTTTCTGGACGGTTAGGGGCTGAGCACAAACTACTAAACAATGAGAAACAGTTACCACCTTTAACTTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCACGGGAAGCAGTACTTaGAGTATGAGGGGGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LGYMGETLSLCVRAHATPTGSST*SMRGKV Trigger: GACCTTCCCCCTCATACTGCAAGTACTGCTTCCCGT...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCTTTAATCCCAGCACTTaGGAGGCAGAGGTAGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: LGYMGETLSLCVRAHATPFNPST*EAEVGG Trigger: TCCGCCTACCTCTGCCTCCCAAGTGCTGGGATTAAA...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCAGATTCATCTGCCTCTaGCTCCAGAGTGCTAGGATT | + |
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Preference number: 2 (lower is better) Translates to: LGYMGETLSLCVRAHATPRFICL*LQSARI Trigger: AATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCTTTGGGCTGTTTTGTTaGGAAAGGGTCTTGCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LGYMGETLSLCVRAHATPFGLFC*ERVLPD Trigger: ATCTGGCAAGACCCTTTCTCAACAAAACAGCCCAAA...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTGAATGGAAAGGCATCTaGACTCTCCCATCGCACGGG | + |
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Preference number: 2 (lower is better) Translates to: RFICLCLQSARIKGVCPAEWKGI*TLPSHG Trigger: CCCGTGCGATGGGAGAGTCCAGATGCCTTTCCATTC...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCAGGTGTATGCCCAGCTaGACTCTGCTTATTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LGYMGETLSLCVRAHATPRCMPS*TLLICF Trigger: AAAACAAATAAGCAGAGTCCAGCTGGGCATACACCT...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTGGGAGCTGGGAATGGTaGCAAAAGCCTGTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: RFICLCLQSARIKGVCPAGSWEW*QKPVIP Trigger: TGGGATTACAGGCTTTTGCCACCATTCCCAGCTCCC...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGGTACATCAGGGAGAATaGAAAGGCATCTGGACTCTC | + |
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Preference number: 2 (lower is better) Translates to: RGLCLLGFEDGGRTILQEVHQGE*KGIWTL Trigger: GAGAGTCCAGATGCCTTTCCATTCTCCCTGATGTAC...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGAGTTCAGGACCACACTaGGTTATATGGGGGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: RGLCLLGFEDGGRTILQESSGPH*VIWGKL Trigger: GAGTTTCCCCCATATAACCCAGTGTGGTCCTGAACT...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTAGACTGCCTCTTACTCTaGAGCCCAGGCTGGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: GNATKFSYLDYDGRPPLLDCLLL*SPGWTQ Trigger: CTGAGTCCAGCCTGGGCTGCAGAGTAAGAGGCAGTC...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGGAATGGAAAGGCATCTaGACTCTCCCATCGCACGGG | + |
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Preference number: 2 (lower is better) Translates to: HAKSLLILFTLENTVGAGEWKGI*TLPSHG Trigger: CCCGTGCGATGGGAGAGTCCAGATGCCTTTCCATTC...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCTCGACCCTTTTCTTCTTTAATTCGGCCTCGCGACTGGCATGGTCATTGCTTCCCATTTTGCCTTaGAGGCTTCTTACAGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: ISSTLFFFNSASRLAWSLLPILP*RLLTAF Trigger: AAAGGCTGTAAGAAGCCTGCAAGGCAAAATGGGAAG...CAATGACCATGCCAGTCGCGAGGCCGAATTAAAGAAGAAAAGGGTCGAGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124022.8 |
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| 3UTR-3UTR CCA 90 bp | TCATCTCCTCGACCCTTTTCTTCTTTAATTCGGCCTCGCGACTGGCATGGTCATCTAGGACTAAGGAGATaGATTCAGGAAGATCCGTCT | + |
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Preference number: 2 (lower is better) Translates to: SSPRPFSSLIRPRDWHGHLGLRR*IQEDPS Trigger: AGACGGATCTTCCTGAATCCATCTCCTTAGTCCTAG...ATGACCATGCCAGTCGCGAGGCCGAATTAAAGAAGAAAAGGGTCGAGGAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124022.8 |
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| 3UTR CAA 90 bp | CCTTCTCTACTCCTACACTACCCAGATGAGGAGCTAGCTATTGATTaGGAAAATACACAGGCAAGAGCCTTGGCACTGAGATCTTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: PSLLLHYPDEELAID*ENTQARALALRSCR Trigger: CCTACAAGATCTCAGTGCCAAGGCTCTTGCCTGTGTATTTTCCAAATCAATAGCTAGCTCCTCATCTGGGTAGTGTAGGAGTAGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR GCA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGAACGGGAAGCAGTACTTaGAGTATGAGGGGGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: HPAANGFPTYYDRYTLSRTGSST*SMRGKV Trigger: GACCTTCCCCCTCATACTGCAAGTACTGCTTCCCGT...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAAGACGGAGTTTCTCTATaGAGCCCTGGCTATCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: NKEISRHESKHLQSQHLEDGVSL*SPGYPG Trigger: TCCAGGATAGCCAGGGCTGCATAGAGAAACTCCGTC...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTAACGGTCTACATTTCCTaGACATCCTGCAGCCAATGG | + |
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Preference number: 2 (lower is better) Translates to: GNATKFSYLDYDGRPPLLTVYIS*TSCSQW Trigger: CCATTGGCTGCAGGATGTTCAGGAAATGTAGACCGT...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAATGCCCAGCTGGACTCTaGTTATTTGTTTTGGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: NKEISRHESKHLQSQHLECPAGL*LFVLGC Trigger: ACAGCCCAAAACAAATAAGCAGAGTCCAGCTGGGCA...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR TCA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAATTTGGGCTGTTTTGTTaGGAAAGGGTCTTGCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: NKEISRHESKHLQSQHLEFGLFC*ERVLPD Trigger: ATCTGGCAAGACCCTTTCTCAACAAAACAGCCCAAA...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGAACCTATTATGTTCAATCCCTGGCACCACAAAACAAACACAAGGTCATTGTACATCAGGGAGAATaGAAAGGCATCTGGACTCTC | + |
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Preference number: 2 (lower is better) Translates to: VRTYYVQSLAPQNKHKVIVHQGE*KGIWTL Trigger: GAGAGTCCAGATGCCTTTCCATTCTCCCTGATGTAC...AATGACCTTGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAATAGGTTCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR CAA 90 bp | CCTGATACGGATATAGTGAAAGTTAAAGGTGGTAACTGTTTCTCATaGTTTAGTAGTTTGTGCTCAGCCCCTAACCGTCCAGAAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: PDTDIVKVKGGNCFS*FSSLCSAPNRPENR Trigger: CCTGTTTTCTGGACGGTTAGGGGCTGAGCACAAACTACTAAACAATGAGAAACAGTTACCACCTTTAACTTTCACTATATCCGTATCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR GCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTCTCACGAGATTCATCTaGCTCTGCCTCCAGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ILQEDTISLGKCHKILLSLTRFI*LCLQSA Trigger: AGCACTCTGGAGGCAGAGGCAGATGAATCTCGTGAG...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR GCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTGACGGAGTTTCTCTATaGAGCCCTGGCTATCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ILQEDTISLGKCHKILLSDGVSL*SPGYPG Trigger: TCCAGGATAGCCAGGGCTGCATAGAGAAACTCCGTC...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR CAA 90 bp | ATAGTGAAAGTTAAAGGTGGTAACTGTTTCTCATTGTTTAGTAGTTaGTGCTCAGCCCCTAACCGTCCAGAAAACAGGTACGGTCTACAT | + |
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Preference number: 2 (lower is better) Translates to: IVKVKGGNCFSLFSS*CSAPNRPENRYGLH Trigger: ATGTAGACCGTACCTGTTTTCTGGACGGTTAGGGGCTGAGCACAAACTACTAAACAATGAGAAACAGTTACCACCTTTAACTTTCACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTTTCTCTATGCAGCCCTaGCTATCCTGGAACTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: ILQEDTISLGKCHKILLSFSMQP*LSWNLL Trigger: GAGCAAGTTCCAGGATAGCCAGGGCTGCATAGAGAA...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR GCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTAGATTCATCTGCCTCTaGCTCCAGAGTGCTAGGATT | + |
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Preference number: 2 (lower is better) Translates to: ILQEDTISLGKCHKILLSRFICL*LQSARI Trigger: AATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAAAGAAGATACATGACATaGAGGTGTTCTCCTATTAAG | + |
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Preference number: 2 (lower is better) Translates to: NKEISRHESKHLQSQHLERRYMT*RCSPIK Trigger: CTTAATAGGAGAACACCTCCATGTCATGTATCTTCT...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTAATTATGTTCAATCCCTaGCACCACAAAACAAACACA | + |
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Preference number: 2 (lower is better) Translates to: GNATKFSYLDYDGRPPLLIMFNP*HHKTNT Trigger: TGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAAT...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGAATTATGTTCAATCCCTaGCACCACAAAACAAACACA | + |
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Preference number: 2 (lower is better) Translates to: HPAANGFPTYYDRYTLSRIMFNP*HHKTNT Trigger: TGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAAT...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTAAGCTTGGTAATAGAATaGTTGTCTAACATTTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GNATKFSYLDYDGRPPLLSLVIE*LSNICE Trigger: CTCACAAATGTTAGACAACCATTCTATTACCAAGCT...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR CCA 72 bp | CCCTGGCTATCCTGGAACTTGCTCGGTAGACCAGGCTaGCCTGAAACTCACGAGATTCATCTGCCTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: PWLSWNLLGRPG*PETHEIHLPLP Trigger: AGGCAGAGGCAGATGAATCTCGTGAGTTTCAGGCCAGCCTGGTCTACCGAGCAAGTTCCAGGATAGCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR CCA 72 bp | GTTCACTTTTCGAGACGGAGTTTCTCTATGCAGCCCTaGCTATCCTGGAACTTGCTCGGTAGACCAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VHFSRRSFSMQP*LSWNLLGRPGW Trigger: CCAGCCTGGTCTACCGAGCAAGTTCCAGGATAGCCAGGGCTGCATAGAGAAACTCCGTCTCGAAAAGTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGGGCAGCTCCAGACCTTaGATAAGAATGGAGGGCACG | + |
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Preference number: 3 (lower is better) Translates to: RGLCLLGFEDGGRTILQEGSSRP*IRMEGT Trigger: CGTGCCCTCCATTCTTATCAAAGGTCTGGAGCTGCC...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR-3UTR CAA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCTTTTGGGCTGTTTTGTaGAGAAAGGGTCTTGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LGYMGETLSLCVRAHATPFWAVL*RKGLAR Trigger: TCTGGCAAGACCCTTTCTCAACAAAACAGCCCAAAA...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR CCA 72 bp | CCTCGACCCTTTTCTTCTTTAATTCGGCCTCGCGACTaGCATGGTCATTGCCATGAACAATCTGGGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: PRPFSSLIRPRD*HGHCHEQSGEQ Trigger: CTGCTCCCCAGATTGTTCATGGCAATGACCATGCCAGTCGCGAGGCCGAATTAAAGAAGAAAAGGGTCGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124022.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCGTACATTGTCAGCACTaGGACTCTGCTTATTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LGYMGETLSLCVRAHATPVHCQH*DSAYLL Trigger: AAGCAAATAAGCAGAGTCCAAGTGCTGACAATGTAC...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGACACAGGCAAGAGCCTaGGCACTGAGATCTTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RGLCLLGFEDGGRTILQETQARA*ALRSCR Trigger: CCTACAAGATCTCAGTGCCAAGGCTCTTGCCTGTGT...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCCAGAGTGGTGTGCCCTaGTTGAAAAGGCAAAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: LGYMGETLSLCVRAHATPQSGVP*LKRQNN Trigger: ATTATTTTGCCTTTTCAACAAGGGCACACCACTCTG...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR TCA 72 bp | TTTAATTCGGCCTCGCGACTGGCATGGTCATTGCCATaGACAATCTGGGGAGCAGATGATGGTCTGGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: FNSASRLAWSLP*TIWGADDGLEV Trigger: AACCTCCAGACCATCATCTGCTCCCCAGATTGTTCATGGCAATGACCATGCCAGTCGCGAGGCCGAATTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124022.8 |
||
| 3UTR GCA 72 bp | GTAGACCAGGCTGGCCTGAAACTCACGAGATTCATCTaGCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: VDQAGLKLTRFI*LCLQSARIKGV Trigger: TACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCTCGTGAGTTTCAGGCCAGCCTGGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR GCA 72 bp | TGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATaGCCAGCTGGACTCTGCTTATTTGTTTTGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CLCLQSARIKGV*PAGLCLFVLGC Trigger: ACAGCCCAAAACAAATAAGCAGAGTCCAGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR CCA 72 bp | CTTCAGACATCTTCCTGCTTCAGCATTCTTAGTGCTTaGAGCACTGGTGTGAGCCACCCACCTGGTTTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LQTSSCFSILSA*STGVSHPPGFS Trigger: ACTAAAACCAGGTGGGTGGCTCACACCAGTGCTCCAAGCACTAAGAATGCTGAAGCAGGAAGATGTCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR-3UTR CAA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGGGCAGCTCCAGACCTTaGATAAGAATGGAGGGCACG | + |
|
Preference number: 3 (lower is better) Translates to: HAKSLLILFTLENTVGAGGSSRP*IRMEGT Trigger: CGTGCCCTCCATTCTTATCAAAGGTCTGGAGCTGCC...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGTTTTGGGCTGTTTTGTaGAGAAAGGGTCTTGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RGLCLLGFEDGGRTILQEFWAVL*RKGLAR Trigger: TCTGGCAAGACCCTTTCTCAACAAAACAGCCCAAAA...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR TCA 72 bp | AGCTGGACTCTGCTTATTTGTTTTGGGCTGTTTTGTTaGGAAAGGGTCTTGCCAGATAGTTCAGGCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SWTLLICFGLFC*ERVLPDSSGWP Trigger: GGGCCAGCCTGAACTATCTGGCAAGACCCTTTCTCAACAAAACAGCCCAAAACAAATAAGCAGAGTCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGGAGCTAGCTATTGATTaGGAAAATACACAGGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RGLCLLGFEDGGRTILQEELAID*ENTQAR Trigger: TCTTGCCTGTGTATTTTCCAAATCAATAGCTAGCTC...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR TCA 72 bp | AGAATATCTAAAGTCCCACATTATTTTGTTTCGCCCTaGGACTGCCTCTTACTCTGCAGCCCAGGCTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: RISKVPHYFVSP*DCLLLCSPGWT Trigger: AGTCCAGCCTGGGCTGCAGAGTAAGAGGCAGTCTCAGGGCGAAACAAAATAATGTGGGACTTTAGATATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR GCA 72 bp | GTTTTATTGTTCACTTTTCGAGACGGAGTTTCTCTATaGAGCCCTGGCTATCCTGGAACTTGCTCGGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VLLFTFRDGVSL*SPGYPGTCSVD Trigger: GTCTACCGAGCAAGTTCCAGGATAGCCAGGGCTGCATAGAGAAACTCCGTCTCGAAAAGTGAACAATAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR TCA 72 bp | CTAACCGTCCAGAAAACAGGTACGGTCTACATTTCCTaGACATCCTGCAGCCAATGGCTTTCCAACTTACTA | + |
|
Preference number: 3 (lower is better) Translates to: LTVQKTGTVYIS*TSCSQWLSNLL Trigger: TAGTAAGTTGGAAAGCCATTGGCTGCAGGATGTTCAGGAAATGTAGACCGTACCTGTTTTCTGGACGGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR CCA 72 bp | TGGTTTCATCAGCCTATAACCCTAGGACTAAGGAGATaGATTCAGGAAGATCCGTCTGTTCCAGGTCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: WFHQPITLGLRR*IQEDPSVPGHL Trigger: AAGATGACCTGGAACAGACGGATCTTCCTGAATCCATCTCCTTAGTCCTAGGGTTATAGGCTGATGAAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124022.8 |
||
| 3UTR GCA 72 bp | AGTGCTAGGATTAAAGGTGTATGCCCAGCTGGACTCTaGTTATTTGTTTTGGGCTGTTTTGTTGAGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SARIKGVCPAGL*LFVLGCFVEKG Trigger: CCCTTTCTCAACAAAACAGCCCAAAACAAATAAGCAGAGTCCAGCTGGGCATACACCTTTAATCCTAGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR GCA 72 bp | AAAGGTGGTAACTGTTTCTCATTGTTTAGTAGTTTGTaGTCAGCCCCTAACCGTCCAGAAAACAGGTACGGT | + |
|
Preference number: 3 (lower is better) Translates to: KGGNCFSLFSSL*SAPNRPENRYG Trigger: ACCGTACCTGTTTTCTGGACGGTTAGGGGCTGAGCACAAACTACTAAACAATGAGAAACAGTTACCACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGATTGTTTTGGGCTGTTTaGTTGAGAAAGGGTCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HPAANGFPTYYDRYTLSRLFWAV*LRKGLA Trigger: GGCAAGACCCTTTCTCAACAAAACAGCCCAAAACAA...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR TCA 72 bp | CCACTTACAACTCTTTTCAAAAGACAAGCCATAAAGTaGAAGCACAAGTCCGTGACTGTCAGGGAGAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PLTTLFKRQAIK*KHKSVTVRERT Trigger: TGTTCTCTCCCTGACAGTCACGGACTTGTGCTTTCACTTTATGGCTTGTCTTTTGAAAAGAGTTGTAAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGACTGGACTCTGCTTATTaGTTTTGGGCTGTTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: HPAANGFPTYYDRYTLSRLDSAY*FWAVLL Trigger: CAACAAAACAGCCCAAAACAAATAAGCAGAGTCCAG...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTACTGGACTCTGCTTATTaGTTTTGGGCTGTTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GNATKFSYLDYDGRPPLLLDSAY*FWAVLL Trigger: CAACAAAACAGCCCAAAACAAATAAGCAGAGTCCAG...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR-3UTR CAA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAAGGTAACTGTTTCTCATaGTTTAGTAGTTTGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NKEISRHESKHLQSQHLEGNCFS*FSSLCS Trigger: TGAGCACAAACTACTAAACAATGAGAAACAGTTACC...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR GCA 72 bp | CTCCCAAGTGTCAGGGTTATAGATATGTTGCCACCATaGCAAGAGTCTGCTGATTTTATTTACCTTAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPSVRVIDMLPP*QESADFIYLRK Trigger: TTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATGGTGGCAACATATCTATAACCCTGACACTTGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR-3UTR CAA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTAGGGTTATAGATATGTaGCCACCATGCCAAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ILQEDTISLGKCHKILLSRVIDM*PPCQES Trigger: AGACTCTTGGCATGGTGGCAACATATCTATAACCCT...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCAGAGCCTGGCCTTGCTaGAGTGGGTCTGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGYMGETLSLCVRAHATPRAWPC*SGSVSR Trigger: CCTGGAGACAGACCCACTTCAGCAAGGCCAGGCTCT...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCTGGGTCCTGGGACAATaGCTGGTGCATCCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGYMGETLSLCVRAHATPWVLGQ*LVHPEA Trigger: GGCTTCTGGATGCACCAGGCATTGTCCCAGGACCCA...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | GAGAATGGAAAGGCATCTGGACTCTCCCATCGCACGGGAAGCAGTACTTGCAGTAGAGCCTGGCCTTGCTaGAGTGGGTCTGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENGKASGLSHRTGSSTCSRAWPC*SGSVSR Trigger: CCTGGAGACAGACCCACTTCAGCAAGGCCAGGCTCT...ACTGCAAGTACTGCTTCCCGTGCGATGGGAGAGTCCAGATGCCTTTCCATTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCTCCTGGGACAATGCCTaGTGCATCCAGAAGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGYMGETLSLCVRAHATPSWDNA*CIQKPD Trigger: ATCAGGCTTCTGGATGCACCAGGCATTGTCCCAGGA...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGTGGGTGGGCAGAGTGTaGGTGGGCGGTGGTAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLLGFEDGGRTILQEWVGRV*VGGGSV Trigger: TACACTACCACCGCCCACTCACACTCTGCCCACCCA...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCAATTACGCAGGATGGTaGCCACCTCTGAATTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGYMGETLSLCVRAHATPNYAGW*PPLNWV Trigger: GACCCAATTCAGAGGTGGGCACCATCCTGCGTAATT...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCGCCAGCTTCTGCACATaGATGCAATTACGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGYMGETLSLCVRAHATPASFCT*MQLRRM Trigger: CATCCTGCGTAATTGCATCCATGTGCAGAAGCTGGC...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCGACCTCCATTTCTTGTaGGTCCATGTCACCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGYMGETLSLCVRAHATPDLHFL*VHVTQQ Trigger: CTGTTGGGTGACATGGACCCACAAGAAATGGAGGTC...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCGTAGTGTATAGAAGCTaGTCTTCCCACTCACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGYMGETLSLCVRAHATPVVYRS*SSHSPS Trigger: ACTGGGTGAGTGGGAAGATCAGCTTCTATACACTAC...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCTGGGACAATGCCTGGTaGATCCAGAAGCCTGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGYMGETLSLCVRAHATPWDNAW*IQKPDK Trigger: TTTATCAGGCTTCTGGATGCACCAGGCATTGTCCCA...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGCGGGGTCACAGGGTCTaGCAGCTTCTGCACATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLLGFEDGGRTILQERGHRV*QLLHMD Trigger: ATCCATGTGCAGAAGCTGGCAGACCCTGTGACCCCG...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTATATGGGGGAAACTCTCTCTCTGTGCGTGCGTGCGCATGCTACCCCCAATAGGCCTTCCTTGTaGCCTCATCATCCAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGYMGETLSLCVRAHATPNRPSL*PHHPTE Trigger: CTCAGTTGGATGATGAGGCCACAAGGAAGGCCTATT...GGGGGTAGCATGCGCACGCACGCACAGAGAGAGAGTTTCCCCCATATAACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGTGCGCTTCAGGCTATTaGTCAGACTGCTCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLLGFEDGGRTILQECASGY*SDCSSP Trigger: TGGGGAAGAGCAGTCTGATCAATAGCCTGAAGCGCA...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGGAGAATGGAGCCACCTaGCCTCCATTTCTTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLLGFEDGGRTILQEENGAT*PPFLVG Trigger: ACCCACAAGAAATGGAGGTCAGGTGGCTCCATTCTC...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | GAGAATGGAAAGGCATCTGGACTCTCCCATCGCACGGGAAGCAGTACTTGCAGTGACTGGCATGGTCATTaGCATGAACAATCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ENGKASGLSHRTGSSTCSDWHGH*HEQSGE Trigger: CTCCCCAGATTGTTCATGGCAATGACCATGCCAGTC...ACTGCAAGTACTGCTTCCCGTGCGATGGGAGAGTCCAGATGCCTTTCCATTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | GAGAATGGAAAGGCATCTGGACTCTCCCATCGCACGGGAAGCAGTACTTGCAGTAACGAGTCAAGTTTTTaGCCTGATGATGCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ENGKASGLSHRTGSSTCSNESSF*PDDAGC Trigger: GCACCCAGCATCATCAGGTCAAAAACTTGACTCGTT...ACTGCAAGTACTGCTTCCCGTGCGATGGGAGAGTCCAGATGCCTTTCCATTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGAGTCTCCAGGATCCTCTaGAACATCGGGCGGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPAANGFPTYYDRYTLSRVSRIL*NIGRRS Trigger: GGACCGCCGCCCGATGTTGCAGAGGATCCTGGAGAC...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTTGCTCTTCCCCACATTaGGAAGGCCTACAACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFICLCLQSARIKGVCPACSSPH*EGLQHP Trigger: TGGGTGTTGTAGGCCTTCCCAATGTGGGGAAGAGCA...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTTCCTGGGACAATGCCTaGTGCATCCAGAAGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RFICLCLQSARIKGVCPASWDNA*CIQKPD Trigger: ATCAGGCTTCTGGATGCACCAGGCATTGTCCCAGGA...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGGCTGGGTGCTGGCCTTaGAAGCCACAGTTGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HAKSLLILFTLENTVGAGAGCWP*KPQLAV Trigger: AACTGCCAACTGTGGCTTTCAAGGCCAGCACCCAGC...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTTTGGCAGCCTGTTCCTaGCTATATACACCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFICLCLQSARIKGVCPALAACS*LYTPPF Trigger: GAAGGGAGGTGTATATAGTCAGGAACAGGCTGCCAA...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTATGGGTGGGCAGAGTGTaGGTGGGCGGTGGTAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GNATKFSYLDYDGRPPLLWVGRV*VGGGSV Trigger: TACACTACCACCGCCCACTCACACTCTGCCCACCCA...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGCTCCAAAGCAGGCTCTaGTTTTCAAAAGCGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLLGFEDGGRTILQELQSRL*FSKATQ Trigger: CTGAGTCGCTTTTGAAAAGCAGAGCCTGCTTTGGAG...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGACTGCAGTCAGAAAGTaGTCAGTCGTCTGGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLLGFEDGGRTILQETAVRK*SVVWNP Trigger: TGGATTCCAGACGACTGAGCACTTTCTGACTGCAGT...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGGACAATAGCTCTCCATaGTCCTGTGTCTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLLGFEDGGRTILQEDNSSP*SCVSVS Trigger: AGAGACAGAGACACAGGACCATGGAGAGCTATTGTC...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTGCCAGCTTCTGCACATaGATGCAATTACGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RFICLCLQSARIKGVCPAASFCT*MQLRRM Trigger: CATCCTGCGTAATTGCATCCATGTGCAGAAGCTGGC...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTAATCTGGGGAGCAGATaGTGGTCTGGAGGTTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RFICLCLQSARIKGVCPANLGSR*WSGGYF Trigger: AAAGTAACCTCCAGACCATCATCTGCTCCCCAGATT...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGAGCTGGGTGCTGGCCTTaGAAGCCACAGTTGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HPAANGFPTYYDRYTLSRAGCWP*KPQLAV Trigger: AACTGCCAACTGTGGCTTTCAAGGCCAGCACCCAGC...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTTTAGGCCACCCCATCTaGTTACGGTTTGGTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RFICLCLQSARIKGVCPALGHPI*LRFGLV Trigger: TACCAAACCAAACCGTAATCAGATGGGGTGGCCTAA...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGCTTCCCATTTTGCCTTaGAGGCTTCTTACAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLLGFEDGGRTILQELPILP*RLLTAF Trigger: AAAGGCTGTAAGAAGCCTGCAAGGCAAAATGGGAAG...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAATGGGTCCTGGGACAATaGCTGGTGCATCCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKEISRHESKHLQSQHLEWVLGQ*LVHPEA Trigger: GGCTTCTGGATGCACCAGGCATTGTCCCAGGACCCA...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTACGGGGTCACAGGGTCTaGCAGCTTCTGCACATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GNATKFSYLDYDGRPPLLRGHRV*QLLHMD Trigger: ATCCATGTGCAGAAGCTGGCAGACCCTGTGACCCCG...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGAACCTATTATGTTCAATCCCTGGCACCACAAAACAAACACAAGGTCATTACACCCACACGAATGTaGCCACGCACTTCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRTYYVQSLAPQNKHKVITPTRM*PRTSPR Trigger: CCTGGGGGAAGTGCGTGGCCACATTCGTGTGGGTGT...AATGACCTTGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAATAGGTTCTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGCTGGCCTTGCTGAAGTaGGTCTGTCTCCAGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HAKSLLILFTLENTVGAGLALLK*VCLQDP Trigger: AGGATCCTGGAGACAGACCCACTTCAGCAAGGCCAG...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGTGCGCTTCAGGCTATTaGTCAGACTGCTCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HAKSLLILFTLENTVGAGCASGY*SDCSSP Trigger: TGGGGAAGAGCAGTCTGATCAATAGCCTGAAGCGCA...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGGAGAATGGAGCCACCTaGCCTCCATTTCTTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HAKSLLILFTLENTVGAGENGAT*PPFLVG Trigger: ACCCACAAGAAATGGAGGTCAGGTGGCTCCATTCTC...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGGGCGGTCCACAGAACTaGCCTCTACTACACGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HAKSLLILFTLENTVGAGGGPQN*PLLHGY Trigger: ATAACCGTGTAGTAGAGGTCAGTTCTGTGGACCGCC...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | GAGAATGGAAAGGCATCTGGACTCTCCCATCGCACGGGAAGCAGTACTTGCAGTGCTTCTTACAGCCTTTaGAACCTTTACCTGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ENGKASGLSHRTGSSTCSASYSL*NLYLVF Trigger: AAAAACCAGGTAAAGGTTCCAAAGGCTGTAAGAAGC...ACTGCAAGTACTGCTTCCCGTGCGATGGGAGAGTCCAGATGCCTTTCCATTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTGAGCAGATGATGGTCTaGAGGTTACTTTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFICLCLQSARIKGVCPAEQMMV*RLLSSH Trigger: ATGGGAAGAAAGTAACCTCCAGACCATCATCTGCTC...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAACTGGCCTTGCTGAAGTaGGTCTGTCTCCAGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKEISRHESKHLQSQHLELALLK*VCLQDP Trigger: AGGATCCTGGAGACAGACCCACTTCAGCAAGGCCAG...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGAATTACGCAGGATGGTaGCCACCTCTGAATTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HAKSLLILFTLENTVGAGNYAGW*PPLNWV Trigger: GACCCAATTCAGAGGTGGGCACCATCCTGCGTAATT...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGGTGTCTTCATTGGCGTaGTCAGTATCTTCTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: RGLCLLGFEDGGRTILQEVSSLA*SVSSIS Trigger: TGATATAGAAGATACTGAGCACGCCAATGAAGACAC...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGAACAGTCTCCTCCATCTaGAAACAGCGGCAGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HPAANGFPTYYDRYTLSRTVSSI*KQRQPN Trigger: ATTGGGCTGCCGCTGTTTCCAGATGGAGGAGACTGT...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTAACAGTCTCCTCCATCTaGAAACAGCGGCAGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GNATKFSYLDYDGRPPLLTVSSI*KQRQPN Trigger: ATTGGGCTGCCGCTGTTTCCAGATGGAGGAGACTGT...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTATGCTCTTCCCCACATTaGGAAGGCCTACAACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNATKFSYLDYDGRPPLLCSSPH*EGLQHP Trigger: TGGGTGTTGTAGGCCTTCCCAATGTGGGGAAGAGCA...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTTTATTTTGGGGGCAATaGTGGTCCACATTGCGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RFICLCLQSARIKGVCPALFWGQ*WSTLRL Trigger: TAAACGCAATGTGGACCACCATTGCCCCCAAAATAA...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR CAA 72 bp | CTCCTACACTACCCAGATGAGGAGCTAGCTATTGATTaGGAAAATACACAGGCAAGAGCCTTGGCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLHYPDEELAID*ENTQARALALR Trigger: TCTCAGTGCCAAGGCTCTTGCCTGTGTATTTTCCAAATCAATAGCTAGCTCCTCATCTGGGTAGTGTAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTATTGGCAGCCTGTTCCTaGCTATATACACCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GNATKFSYLDYDGRPPLLLAACS*LYTPPF Trigger: GAAGGGAGGTGTATATAGTCAGGAACAGGCTGCCAA...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTATAACCCTAGGACTAAGGAGATGGATTCAGGAAGATCCGTCTGTTCCAAAAGAAATTCCTCTTaGCAGATGTGGTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAYNPRTKEMDSGRSVCSKRNSS*QMWCLL Trigger: CAAGAGGCACCACATCTGTCAAGAGGAATTTCTTTT...GGAACAGACGGATCTTCCTGAATCCATCTCCTTAGTCCTAGGGTTATAGGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124022.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAAGCTTCTGCACATGGATaGAATTACGCAGGATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKEISRHESKHLQSQHLEASAHG*NYAGWC Trigger: GCACCATCCTGCGTAATTGCATCCATGTGCAGAAGC...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTGTGTCTTCATTGGCGTaGTCAGTATCTTCTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: RFICLCLQSARIKGVCPAVSSLA*SVSSIS Trigger: TGATATAGAAGATACTGAGCACGCCAATGAAGACAC...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTACACCCACACGAATGTaGCCACGCACTTCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILQEDTISLGKCHKILLSTPTRM*PRTSPR Trigger: CCTGGGGGAAGTGCGTGGCCACATTCGTGTGGGTGT...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGAGACCTCCATTTCTTGTaGGTCCATGTCACCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HPAANGFPTYYDRYTLSRDLHFL*VHVTQQ Trigger: CTGTTGGGTGACATGGACCCACAAGAAATGGAGGTC...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR CAA 72 bp | GGATTAAAGGTGTATGCCCAGCTGGACTCTGCTTATTaGTTTTGGGCTGTTTTGTTGAGAAAGGGTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLKVYAQLDSAY*FWAVLLRKGLA Trigger: GGCAAGACCCTTTCTCAACAAAACAGCCCAAAACAAATAAGCAGAGTCCAGCTGGGCATACACCTTTAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTAAATCTGGGGAGCAGATaGTGGTCTGGAGGTTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNATKFSYLDYDGRPPLLNLGSR*WSGGYF Trigger: AAAGTAACCTCCAGACCATCATCTGCTCCCCAGATT...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTACAGTTGGCAGTTCATTaGGAAGGTATTCCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GNATKFSYLDYDGRPPLLQLAVH*EGIPAT Trigger: AGTGGCTGGAATACCTTCTCAATGAACTGCCAACTG...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGATTAGGCCACCCCATCTaGTTACGGTTTGGTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HPAANGFPTYYDRYTLSRLGHPI*LRFGLV Trigger: TACCAAACCAAACCGTAATCAGATGGGGTGGCCTAA...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGAACCTATTATGTTCAATCCCTGGCACCACAAAACAAACACAAGGTCATTGACTGGCATGGTCATTaGCATGAACAATCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRTYYVQSLAPQNKHKVIDWHGH*HEQSGE Trigger: CTCCCCAGATTGTTCATGGCAATGACCATGCCAGTC...AATGACCTTGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAATAGGTTCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR GCA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAATGGGACAATGCCTGGTaGATCCAGAAGCCTGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKEISRHESKHLQSQHLEWDNAW*IQKPDK Trigger: TTTATCAGGCTTCTGGATGCACCAGGCATTGTCCCA...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTAAATAGGCCTTCCTTGTaGCCTCATCATCCAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GNATKFSYLDYDGRPPLLNRPSL*PHHPTE Trigger: CTCAGTTGGATGATGAGGCCACAAGGAAGGCCTATT...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR CAA 72 bp | AGCTCCAGTCTCCCAAGTGTCAGGGTTATAGATATGTaGCCACCATGCCAAGAGTCTGCTGATTTTATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLPSVRVIDM*PPCQESADFIY Trigger: GTAAATAAAATCAGCAGACTCTTGGCATGGTGGCAACATATCTATAACCCTGACACTTGGGAGACTGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR TCA 90 bp | GTGAGAACCTATTATGTTCAATCCCTGGCACCACAAAACAAACACAAGGTCATTGTAGTGTATAGAAGCTaGTCTTCCCACTCACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRTYYVQSLAPQNKHKVIVVYRS*SSHSPS Trigger: ACTGGGTGAGTGGGAAGATCAGCTTCTATACACTAC...AATGACCTTGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAATAGGTTCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAAATACACCATAGTAGCTaGAAATCTCCTCCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKEISRHESKHLQSQHLEIHHSS*KSPPGC Trigger: GCAACCTGGAGGAGATTTCCAGCTACTATGGTGTAT...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| 3UTR CAA 72 bp | GTTAAAGGTGGTAACTGTTTCTCATTGTTTAGTAGTTaGTGCTCAGCCCCTAACCGTCCAGAAAACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VKGGNCFSLFSS*CSAPNRPENRY Trigger: GTACCTGTTTTCTGGACGGTTAGGGGCTGAGCACAAACTACTAAACAATGAGAAACAGTTACCACCTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGAACCTATTATGTTCAATCCCTGGCACCACAAAACAAACACAAGGTCATTATACACCATAGTAGCTaGAAATCTCCTCCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRTYYVQSLAPQNKHKVIIHHSS*KSPPGC Trigger: GCAACCTGGAGGAGATTTCCAGCTACTATGGTGTAT...AATGACCTTGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAATAGGTTCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CCA 90 bp | TGGTTTCATCAGCCTATAACCCTAGGACTAAGGAGATGGATTCAGGAAGATCCGAACTACATGAGACACTaGCTCAAAAAGAAATTCCTC | + |
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Preference number: 4 (lower is better) Translates to: WFHQPITLGLRRWIQEDPNYMRH*LKKKFL Trigger: GAGGAATTTCTTTTTGAGCCAGTGTCTCATGTAGTT...CGGATCTTCCTGAATCCATCTCCTTAGTCCTAGGGTTATAGGCTGATGAAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124022.8 |
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| 3UTR CAA 72 bp | ACATTAGAGTTAGAATATCTAAAGTCCCACATTATTTaGTTTCGCCCTGAGACTGCCTCTTACTCTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TLELEYLKSHII*FRPETASYSAA Trigger: GGCTGCAGAGTAAGAGGCAGTCTCAGGGCGAAACAAAATAATGTGGGACTTTAGATATTCTAACTCTAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR GCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTCTTCTTGTTGCCTTCTaGACGAAGGACAGTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ILQEDTISLGKCHKILLSLLVAF*TKDSLL Trigger: GAGGAGACTGTCCTTCGTGCAGAAGGCAACAAGAAG...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR GCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTGCTTCTGCACATGGATaGAATTACGCAGGATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ILQEDTISLGKCHKILLSASAHG*NYAGWC Trigger: GCACCATCCTGCGTAATTGCATCCATGTGCAGAAGC...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CCA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGAGCTTCTTACAGCCTTTaGAACCTTTACCTGGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: HPAANGFPTYYDRYTLSRASYSL*NLYLVF Trigger: AAAAACCAGGTAAAGGTTCCAAAGGCTGTAAGAAGC...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CCA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAACATCTGATTACGGTTTaGTTTGGTACAATACCCAGT | + |
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Preference number: 4 (lower is better) Translates to: NKEISRHESKHLQSQHLEHLITV*FGTIPS Trigger: ACTGGGTATTGTACCAAACCAAACCGTAATCAGATG...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CCA 90 bp | GTGAGAACCTATTATGTTCAATCCCTGGCACCACAAAACAAACACAAGGTCATTTTATTTTGGGGGCAATaGTGGTCCACATTGCGTTTA | + |
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Preference number: 4 (lower is better) Translates to: VRTYYVQSLAPQNKHKVILFWGQ*WSTLRL Trigger: TAAACGCAATGTGGACCACCATTGCCCCCAAAATAA...AATGACCTTGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAATAGGTTCTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR GCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTCTCCAAAGCAGGCTCTaGTTTTCAAAAGCGACTCAG | + |
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Preference number: 4 (lower is better) Translates to: ILQEDTISLGKCHKILLSLQSRL*FSKATQ Trigger: CTGAGTCGCTTTTGAAAAGCAGAGCCTGCTTTGGAG...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR GCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTACTGCAGTCAGAAAGTaGTCAGTCGTCTGGAATCCA | + |
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Preference number: 4 (lower is better) Translates to: ILQEDTISLGKCHKILLSTAVRK*SVVWNP Trigger: TGGATTCCAGACGACTGAGCACTTTCTGACTGCAGT...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR CAA 72 bp | GATATAGTGAAAGTTAAAGGTGGTAACTGTTTCTCATaGTTTAGTAGTTTGTGCTCAGCCCCTAACCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DIVKVKGGNCFS*FSSLCSAPNRP Trigger: TGGACGGTTAGGGGCTGAGCACAAACTACTAAACAATGAGAAACAGTTACCACCTTTAACTTTCACTATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR GCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTCTTCCCATTTTGCCTTaGAGGCTTCTTACAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: ILQEDTISLGKCHKILLSLPILP*RLLTAF Trigger: AAAGGCTGTAAGAAGCCTGCAAGGCAAAATGGGAAG...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTGAGCAGATGATGGTCTaGAGGTTACTTTCTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: ILQEDTISLGKCHKILLSEQMMV*RLLSSH Trigger: ATGGGAAGAAAGTAACCTCCAGACCATCATCTGCTC...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| 3UTR CAA 72 bp | CTAGCTATTGATTTGGAAAATACACAGGCAAGAGCCTaGGCACTGAGATCTTGTAGGGTGATAAAAATGAAA | + |
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Preference number: 4 (lower is better) Translates to: LAIDLENTQARA*ALRSCRVIKMK Trigger: TTTCATTTTTATCACCCTACAAGATCTCAGTGCCAAGGCTCTTGCCTGTGTATTTTCCAAATCAATAGCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CCA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTCATCTGATTACGGTTTaGTTTGGTACAATACCCAGT | + |
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Preference number: 4 (lower is better) Translates to: ILQEDTISLGKCHKILLSHLITV*FGTIPS Trigger: ACTGGGTATTGTACCAAACCAAACCGTAATCAGATG...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS TCA 90 bp | CTGTCTCCAGGATCCTCTGCAACATCGGGCGGCGGTCCACAGAACTaGCCTCTACTACACGGTTATTTTGGGGGCAATGGTGGTCCACAT | + |
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Preference number: 5 (lower is better) Translates to: LSPGSSATSGGGPQN*PLLHGYFGGNGGPH Trigger: ATGTGGACCACCATTGCCCCCAAAATAACCGTGTAGTAGAGGTCAGTTCTGTGGACCGCCGCCCGATGTTGCAGAGGATCCTGGAGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | AGATTCATCTGCCTCTGCCTCCAGAGTGCTAGGATTAAAGGTGTATGCCCAGCTTGCTGGGTGCTGGCCTaGAAAGCCACAGTTGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RFICLCLQSARIKGVCPACWVLA*KATVGS Trigger: ACTGCCAACTGTGGCTTTCAAGGCCAGCACCCAGCA...AGCTGGGCATACACCTTTAATCCTAGCACTCTGGAGGCAGAGGCAGATGAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGATGCCAGAGCCTGGCCTaGCTGAAGTGGGTCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: HPAANGFPTYYDRYTLSRCQSLA*LKWVCL Trigger: GAGACAGACCCACTTCAGCAAGGCCAGGCTCTGGCA...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | AGAGGTCTGTGCCTGCTAGGATTTGAGGATGGGGGCAGGACTATACTACAAGAGGGCTTCTTACAGCCTTaGGAACCTTTACCTGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: RGLCLLGFEDGGRTILQEGFLQP*EPLPGF Trigger: AAAACCAGGTAAAGGTTCCAAAGGCTGTAAGAAGCC...CTCTTGTAGTATAGTCCTGCCCCCATCCTCAAATCCTAGCAGGCACAGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | CATCCTGCAGCCAATGGCTTTCCAACTTACTATGATAGGTATACCCTTTCTAGATGCTGGGTGCTGGCCTaGAAAGCCACAGTTGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: HPAANGFPTYYDRYTLSRCWVLA*KATVGS Trigger: ACTGCCAACTGTGGCTTTCAAGGCCAGCACCCAGCA...TCTAGAAAGGGTATACCTATCATAGTAAGTTGGAAAGCCATTGGCTGCAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | GTGAGAACCTATTATGTTCAATCCCTGGCACCACAAAACAAACACAAGGTCATTTGCCAGAGCCTGGCCTaGCTGAAGTGGGTCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: VRTYYVQSLAPQNKHKVICQSLA*LKWVCL Trigger: GAGACAGACCCACTTCAGCAAGGCCAGGCTCTGGCA...AATGACCTTGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAATAGGTTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGGCACAGTCATCGGAGTaGCCAGAGAGGTCAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: HAKSLLILFTLENTVGAGAQSSE*PERSSM Trigger: CATGCTTGACCTCTCTGGCAACTCCGATGACTGTGC...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | GGAAATGCCACAAAATTCTCTTATCTTGATTATGATGGCAGGCCACCCCTGTTACTGCGCTTCAGGCTATaGATCAGACTGCTCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: GNATKFSYLDYDGRPPLLLRFRL*IRLLFP Trigger: GGGGAAGAGCAGTCTGATCAATAGCCTGAAGCGCAG...TAACAGGGGTGGCCTGCCATCATAATCAAGATAAGAGAATTTTGTGGCATTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | AACAAAGAAATATCCAGGCATGAAAGCAAACACCTGCAATCCCAGCACTTGGAACAATGGTGGTCCACATaGCGTTTAGGCCACCCCATC | + |
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Preference number: 5 (lower is better) Translates to: NKEISRHESKHLQSQHLEQWWST*RLGHPI Trigger: GATGGGGTGGCCTAAACGCAATGTGGACCACCATTG...TTCCAAGTGCTGGGATTGCAGGTGTTTGCTTTCATGCCTGGATATTTCTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | GTGAGAACCTATTATGTTCAATCCCTGGCACCACAAAACAAACACAAGGTCATTCTGCGCTTCAGGCTATaGATCAGACTGCTCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: VRTYYVQSLAPQNKHKVILRFRL*IRLLFP Trigger: GGGGAAGAGCAGTCTGATCAATAGCCTGAAGCGCAG...AATGACCTTGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAATAGGTTCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGTCTTCCCATTTTGCCTaGCAGGCTTCTTACAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: HAKSLLILFTLENTVGAGSSHFA*QASYSL Trigger: AAGGCTGTAAGAAGCCTGCAAGGCAAAATGGGAAGA...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | TCATCTCCTCGACCCTTTTCTTCTTTAATTCGGCCTCGCGACTGGCATGGTCATAAAAAGAAATTCCTCTaGACAGATGTGGTGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SSPRPFSSLIRPRDWHGHKKKFL*TDVVPL Trigger: AAGAGGCACCACATCTGTCAAGAGGAATTTCTTTTT...ATGACCATGCCAGTCGCGAGGCCGAATTAAAGAAGAAAAGGGTCGAGGAGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124022.8 |
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| CDS-3UTR CAA 90 bp | CATGCCAAGAGTCTGCTGATTTTATTTACCTTAGAAAACACAGTGGGAGCTGGGGGCTTCTTACAGCCTTaGGAACCTTTACCTGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: HAKSLLILFTLENTVGAGGFLQP*EPLPGF Trigger: AAAACCAGGTAAAGGTTCCAAAGGCTGTAAGAAGCC...CCCAGCTCCCACTGTGTTTTCTAAGGTAAATAAAATCAGCAGACTCTTGGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTGCACAGTCATCGGAGTaGCCAGAGAGGTCAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: ILQEDTISLGKCHKILLSAQSSE*PERSSM Trigger: CATGCTTGACCTCTCTGGCAACTCCGATGACTGTGC...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | GTGAGAACCTATTATGTTCAATCCCTGGCACCACAAAACAAACACAAGGTCATTCAAAACTTCCTCCTTTaGTTCAAATTCCTGCTGACG | + |
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Preference number: 5 (lower is better) Translates to: VRTYYVQSLAPQNKHKVIQNFLL*FKFLLT Trigger: CGTCAGCAGGAATTTGAACAAAAGGAGGAAGTTTTG...AATGACCTTGTGTTTGTTTTGTGGTGCCAGGGATTGAACATAATAGGTTCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS-3UTR CAA 90 bp | ATACTACAAGAGGACACAATAAGTTTGGGGAAATGCCACAAAATTCTCTTATCTTCTTCCCATTTTGCCTaGCAGGCTTCTTACAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: ILQEDTISLGKCHKILLSSSHFA*QASYSL Trigger: AAGGCTGTAAGAAGCCTGCAAGGCAAAATGGGAAGA...AGATAAGAGAATTTTGTGGCATTTCCCCAAACTTATTGTGTCCTCTTGTAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS TCA 72 bp | GGATCCTCTGCAACATCGGGCGGCGGTCCACAGAACTaGCCTCTACTACACGGTTATTTTGGGGGCAATGGT | + |
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Preference number: 6 (lower is better) Translates to: GSSATSGGGPQN*PLLHGYFGGNG Trigger: ACCATTGCCCCCAAAATAACCGTGTAGTAGAGGTCAGTTCTGTGGACCGCCGCCCGATGTTGCAGAGGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS GCA 72 bp | CCAGCTTCTGCACATGGATGCAATTACGCAGGATGGTaGCCACCTCTGAATTGGGTCCTGGGACAATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PASAHGCNYAGW*PPLNWVLGQCL Trigger: CAGGCATTGTCCCAGGACCCAATTCAGAGGTGGGCACCATCCTGCGTAATTGCATCCATGTGCAGAAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS CAA 72 bp | GCGGTCCACAGAACTGACCTCTACTACACGGTTATTTaGGGGGCAATGGTGGTCCACATTGCGTTTAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AVHRTDLYYTVI*GAMVVHIAFRP Trigger: TGGCCTAAACGCAATGTGGACCACCATTGCCCCCAAAATAACCGTGTAGTAGAGGTCAGTTCTGTGGACCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 |
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| CDS CCA 72 bp | AGTGACTTCAAGGCCAGCTTGAACTACATGAGACACTaGCTCAAAAAGAAATTCCTCTTGACAGATGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SDFKASLNYMRH*LKKKFLLTDVV Trigger: CACCACATCTGTCAAGAGGAATTTCTTTTTGAGCCAGTGTCTCATGTAGTTCAAGCTGGCCTTGAAGTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124022.8 |
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| CDS CAA 72 bp | TTGAGAAGGTATTCCAGCCACTTTTCCACAATCTCCTaGGGAACGAGATCTATCTTATTTAAGACCAAGACC | + |
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Preference number: 6 (lower is better) Translates to: LRRYSSHFSTIS*GTRSILFKTKT Trigger: GGTCTTGGTCTTAAATAAGATAGATCTCGTTCCCAAGGAGATTGTGGAAAAGTGGCTGGAATACCTTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026297.12 ENSMUST00000112691.9 ENSMUST00000154393.8 |
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