Pregenerated sensors for GNL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042354Ensembl transcript IDs: ENSMUST00000037739.8, ENSMUST00000226379.2, ENSMUST00000226740.2, ENSMUST00000227467.2, ENSMUST00000228341.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGACAGAATGGCACTGGCAGCCTCCAGCGGTCTTAGTTCCTCAATaGTTGCTGGACTCCGAAGGGCAAGTGCAGTGGGGGAGTTACAAG | + |
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Preference number: 1 (lower is better) Translates to: ETEWHWQPPAVLVPQ*LLDSEGQVQWGSYK Trigger: CTTGTAACTCCCCCACTGCACTTGCCCTTCGGAGTCCAGCAAGCATTGAGGAACTAAGACCGCTGGAGGCTGCCAGTGCCATTCTGTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR CCA 90 bp | ATTTTAACACCACCTGTTCATTATCAGCCTGAGACAGAATGGCACTaGCAGCCTCCAGCGGTCTTAGTTCCTCAATGCTTGCTGGACTCC | + |
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Preference number: 1 (lower is better) Translates to: ILTPPVHYQPETEWH*QPPAVLVPQCLLDS Trigger: GGAGTCCAGCAAGCATTGAGGAACTAAGACCGCTGGAGGCTGCCAGTGCCATTCTGTCTCAGGCTGATAATGAACAGGTGGTGTTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR CCA 90 bp | CAGTATATTTTAACACCACCTGTTCATTATCAGCCTGAGACAGAATaGCACTGGCAGCCTCCAGCGGTCTTAGTTCCTCAATGCTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: QYILTPPVHYQPETE*HWQPPAVLVPQCLL Trigger: CAGCAAGCATTGAGGAACTAAGACCGCTGGAGGCTGCCAGTGCCATTCTGTCTCAGGCTGATAATGAACAGGTGGTGTTAAAATATACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR GCA 90 bp | CATGGACTGTCTATGATTGTGATCTGCTTGTCTAAAGGGACAATCTaGATGCTCCTTGTAAGTCCCATGGAAATCCCAACATTGCAAATC | + |
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Preference number: 1 (lower is better) Translates to: HGLSMIVICLSKGTI*MLLVSPMEIPTLQI Trigger: GATTTGCAATGTTGGGATTTCCATGGGACTTACAAGGAGCATGCAGATTGTCCCTTTAGACAAGCAGATCACAATCATAGACAGTCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR GCA 90 bp | TTACAAGGTGAGATAATTAGGCATGGACTGTCTATGATTGTGATCTaGTTGTCTAAAGGGACAATCTGCATGCTCCTTGTAAGTCCCATG | + |
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Preference number: 1 (lower is better) Translates to: LQGEIIRHGLSMIVI*LSKGTICMLLVSPM Trigger: CATGGGACTTACAAGGAGCATGCAGATTGTCCCTTTAGACAAGCAGATCACAATCATAGACAGTCCATGCCTAATTATCTCACCTTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR CAA 90 bp | ACAGAATGGCACTGGCAGCCTCCAGCGGTCTTAGTTCCTCAATGCTaGCTGGACTCCGAAGGGCAAGTGCAGTGGGGGAGTTACAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: TEWHWQPPAVLVPQC*LDSEGQVQWGSYKV Trigger: CACCTTGTAACTCCCCCACTGCACTTGCCCTTCGGAGTCCAGCAAGCATTGAGGAACTAAGACCGCTGGAGGCTGCCAGTGCCATTCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGGTCTCTTCTACAGGGGCCACATCTGAGATCTCTGCATTTCTTTCACCAACTCCGAAGGGCAAGTaGAGTGGGGGAGTTACAAGG | + |
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Preference number: 2 (lower is better) Translates to: SLVSSTGATSEISAFLSPTPKGK*SGGVTR Trigger: CCTTGTAACTCCCCCACTGCACTTGCCCTTCGGAGT...TGGTGAAAGAAATGCAGAGATCTCAGATGTGGCCCCTGTAGAAGAGACCAGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR TCA 90 bp | TTACCTGCTGTTGATTGCTCAGGTGACAGCTCCCTGGTCTCTTCTACAGGGGCCTTTCCACAGGACTGCTaGAAATCTCCAAGAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LPAVDCSGDSSLVSSTGAFPQDC*KSPRSF Trigger: GAAGCTTCTTGGAGATTTTCAGCAGTCCTGTGGAAA...GGCCCCTGTAGAAGAGACCAGGGAGCTGTCACCTGAGCAATCAACAGCAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGATTGCTCAGGTGACAGCTCCCTGGTCTCTTCTACAGGGGCCACATCTGAGTCCAAAGGGCTTCCTTaGCACAGCAGATTTTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: VDCSGDSSLVSSTGATSESKGLP*HSRFCF Trigger: AAAGCAAAATCTGCTGTGGCAAGGAAGCCCTTTGGA...CTCAGATGTGGCCCCTGTAGAAGAGACCAGGGAGCTGTCACCTGAGCAATCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTCCTCAATGCTTGCTGGACTCCGAAGGGCAAGTGCAGTGGGGGAGTTACCCAATCACTCCAACTTaGATATCCTTTCCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LVPQCLLDSEGQVQWGSYPITPT*ISFPQD Trigger: GTCCTGTGGAAAGGATATTCAAGTTGGAGTGATTGG...GTAACTCCCCCACTGCACTTGCCCTTCGGAGTCCAGCAAGCATTGAGGAACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGATTGCTCAGGTGACAGCTCCCTGGTCTCTTCTACAGGGGCCACATCTGAGCAGCAGATTTTGCTTTaGAATGGAACAACTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VDCSGDSSLVSSTGATSEQQILL*NGTTFF Trigger: GAAGAAAGTTGTTCCATTCCAAAGCAAAATCTGCTG...CTCAGATGTGGCCCCTGTAGAAGAGACCAGGGAGCTGTCACCTGAGCAATCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGGTCTCTTCTACAGGGGCCACATCTGAGATCTCTGCATTTCTTTCACCATCTATGATTGTGATCTaGTTGTCTAAAGGGACAATC | + |
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Preference number: 2 (lower is better) Translates to: SLVSSTGATSEISAFLSPSMIVI*LSKGTI Trigger: GATTGTCCCTTTAGACAAGCAGATCACAATCATAGA...TGGTGAAAGAAATGCAGAGATCTCAGATGTGGCCCCTGTAGAAGAGACCAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCTTCTCGTCTAGTATTCCATTTGTCAGGCCCGAAGACCGAAAAAGGATTAGCACTTTCCACATTTaGGCTTCCACCTTTTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: MSFSSSIPFVRPEDRKRISTFHI*ASTFLV Trigger: CACCAAAAAGGTGGAAGCCCAAATGTGGAAAGTGCT...AATCCTTTTTCGGTCTTCGGGCCTGACAAATGGAATACTAGACGAGAAGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR CAA 90 bp | CAAGGTGAGATAATTAGGCATGGACTGTCTATGATTGTGATCTGCTaGTCTAAAGGGACAATCTGCATGCTCCTTGTAAGTCCCATGGAA | + |
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Preference number: 2 (lower is better) Translates to: QGEIIRHGLSMIVIC*SKGTICMLLVSPME Trigger: TTCCATGGGACTTACAAGGAGCATGCAGATTGTCCCTTTAGACAAGCAGATCACAATCATAGACAGTCCATGCCTAATTATCTCACCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTCTTTCACCACTACCATTTTCTTGATCGTCAGCATCCTGTTTGTCTTCTGGCTTTTCCCCACATTTaGGAAACCAATCACTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: HFFHHYHFLDRQHPVCLLAFPHI*ETNHSN Trigger: GTTGGAGTGATTGGTTTCCCAAATGTGGGGAAAAGC...CAGAAGACAAACAGGATGCTGACGATCAAGAAAATGGTAGTGGTGAAAGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR CAA 90 bp | TACCATTTTCTTGATCGTCAGCATCCTGTTTGTCTTCTGTCTGTCTaGGTGATTCTTCGACTATGTCCTTCTCGTCTAGTATTCCATTTG | + |
|
Preference number: 2 (lower is better) Translates to: YHFLDRQHPVCLLSV*VILRLCPSRLVFHL Trigger: CAAATGGAATACTAGACGAGAAGGACATAGTCGAAGAATCACCAAGACAGACAGAAGACAAACAGGATGCTGACGATCAAGAAAATGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR CAA 90 bp | GGGACAATCTGCATGCTCCTTGTAAGTCCCATGGAAATCCCAACATaGCAAATCCATTCTTGTTTTAAGCTATTAATGACACTGCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: GTICMLLVSPMEIPT*QIHSCFKLLMTLLF Trigger: GAAAAGCAGTGTCATTAATAGCTTAAAACAAGAATGGATTTGCAATGTTGGGATTTCCATGGGACTTACAAGGAGCATGCAGATTGTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR GCA 72 bp | TGGCACTGGCAGCCTCCAGCGGTCTTAGTTCCTCAATaGTTGCTGGACTCCGAAGGGCAAGTGCAGTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: WHWQPPAVLVPQ*LLDSEGQVQWG Trigger: CCCCCACTGCACTTGCCCTTCGGAGTCCAGCAAGCATTGAGGAACTAAGACCGCTGGAGGCTGCCAGTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR CCA 72 bp | GCTTACCTGCTGTTGATTGCTCAGGTGACAGCTCCCTaGTCTCTTCTACAGGGGCCACATCTGAGATCTCTG | + |
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Preference number: 3 (lower is better) Translates to: AYLLLIAQVTAP*SLLQGPHLRSL Trigger: CAGAGATCTCAGATGTGGCCCCTGTAGAAGAGACCAGGGAGCTGTCACCTGAGCAATCAACAGCAGGTAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR CAA 90 bp | TATCAGCCTGAGACAGAATGGCACTGGCAGCCTCCAGCGGTCTTAGTTCCTCAATTGCCACAGCAGATTTaGCTTTGGAATGGAACAACT | + |
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Preference number: 3 (lower is better) Translates to: YQPETEWHWQPPAVLVPQLPQQI*LWNGTT Trigger: AGTTGTTCCATTCCAAAGCAAAATCTGCTGTGGCAA...TTGAGGAACTAAGACCGCTGGAGGCTGCCAGTGCCATTCTGTCTCAGGCTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCTTGCTGGACTCCGAAGGGCAAGTGCAGTGGGGGAGTTACAAGGTGAGATAATGATTGTGATCTGCTaGTCTAAAGGGACAATCTGC | + |
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Preference number: 3 (lower is better) Translates to: MLAGLRRASAVGELQGEIMIVIC*SKGTIC Trigger: GCAGATTGTCCCTTTAGACAAGCAGATCACAATCAT...TATCTCACCTTGTAACTCCCCCACTGCACTTGCCCTTCGGAGTCCAGCAAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTGGTCTCTTCTACAGGGGCCACATCTGAGATCTCTGCATTTCTTTCACCATCGTCAGCATCCTGTTaGTCTTCTGTCTGTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: SLVSSTGATSEISAFLSPSSASC*SSVCLG Trigger: ACCAAGACAGACAGAAGACAAACAGGATGCTGACGA...TGGTGAAAGAAATGCAGAGATCTCAGATGTGGCCCCTGTAGAAGAGACCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTCCTTCTCGTCTAGTATTCCATTTGTCAGGCCCGAAGACCGAAAAAGGATTTTCCAAAGGGCTTCCTaGCCACAGCAGATTTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: MSFSSSIPFVRPEDRKRIFQRAS*PQQILL Trigger: AAGCAAAATCTGCTGTGGCAAGGAAGCCCTTTGGAA...AATCCTTTTTCGGTCTTCGGGCCTGACAAATGGAATACTAGACGAGAAGGACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGAATATCCTTTCCACAGGACTGCTGAAAATCTCCAAGAAGCTTCCAAAGGGAAGTTTGTTGAGGCTTaGAACACCACGGTTGGCAAT | + |
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Preference number: 3 (lower is better) Translates to: LEYPFHRTAENLQEASKGKFVEA*NTTVGN Trigger: ATTGCCAACCGTGGTGTTCAAAGCCTCAACAAACTT...CCCTTTGGAAGCTTCTTGGAGATTTTCAGCAGTCCTGTGGAAAGGATATTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR TCA 72 bp | AGGCCCGAAGACCGAAAAAGGATTCTATTAGTTAAATaGGGGCCCTTGAGGACTTGTATGCTGTGTGCATTA | + |
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Preference number: 3 (lower is better) Translates to: RPEDRKRILLVK*GPLRTCMLCAL Trigger: TAATGCACACAGCATACAAGTCCTCAAGGGCCCTCATTTAACTAATAGAATCCTTTTTCGGTCTTCGGGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR GCA 72 bp | TCTATGATTGTGATCTGCTTGTCTAAAGGGACAATCTaGATGCTCCTTGTAAGTCCCATGGAAATCCCAACA | + |
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Preference number: 3 (lower is better) Translates to: SMIVICLSKGTI*MLLVSPMEIPT Trigger: TGTTGGGATTTCCATGGGACTTACAAGGAGCATGCAGATTGTCCCTTTAGACAAGCAGATCACAATCATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR CCA 72 bp | CTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTaGCGGTTATATATAATCTGTGGTGAAGTCATAGGT | + |
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Preference number: 3 (lower is better) Translates to: LNYTAYREHVSV*RLYIICGEVIG Trigger: ACCTATGACTTCACCACAGATTATATATAACCGCCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATTTCTTTCACCACTACCATTTTCTTGATCGTCAGCATCCTGTTTGTCTTCACAGCAGATTTTGCTTaGGAATGGAACAACTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: CISFTTTIFLIVSILFVFTADFA*EWNNFL Trigger: AAGAAAGTTGTTCCATTCCAAAGCAAAATCTGCTGT...GAAGACAAACAGGATGCTGACGATCAAGAAAATGGTAGTGGTGAAAGAAATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTTCTAGTTCTTCTAGATTAAAGCCCTTCTTCATGACTGCTGCAATATTCTCTCCAAATTCTCCTTaGGTACTAGATCAGACTTAT | + |
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Preference number: 3 (lower is better) Translates to: FFSSSSRLKPFFMTAAIFSPNSP*VLDQTY Trigger: ATAAGTCTGATCTAGTACCAAAGGAGAATTTGGAGA...GAATATTGCAGCAGTCATGAAGAAGGGCTTTAATCTAGAAGAACTAGAAAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR CAA 72 bp | CACTGGCAGCCTCCAGCGGTCTTAGTTCCTCAATGCTaGCTGGACTCCGAAGGGCAAGTGCAGTGGGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: HWQPPAVLVPQC*LDSEGQVQWGS Trigger: ACTCCCCCACTGCACTTGCCCTTCGGAGTCCAGCAAGCATTGAGGAACTAAGACCGCTGGAGGCTGCCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| 3UTR CAA 72 bp | CCAAGGCAGACGACCCGTCAGATGGCTTACCTGCTGTaGATTGCTCAGGTGACAGCTCCCTGGTCTCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: PRQTTRQMAYLL*IAQVTAPWSLL Trigger: TAGAAGAGACCAGGGAGCTGTCACCTGAGCAATCAACAGCAGGTAAGCCATCTGACGGGTCGTCTGCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| CDS-3UTR CCA 90 bp | TTACCTGCTGTTGATTGCTCAGGTGACAGCTCCCTGGTCTCTTCTACAGGGGCCACTATTTGGAACACCTaGGTCCTTCCTAGGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LPAVDCSGDSSLVSSTGATIWNT*VLPRLL Trigger: AAGAAGCCTAGGAAGGACCCAGGTGTTCCAAATAGT...GGCCCCTGTAGAAGAGACCAGGGAGCTGTCACCTGAGCAATCAACAGCAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| CDS-3UTR CCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGCAGCCTGAGACAGAATaGCACTGGCAGCCTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWQPETE*HWQPPA Trigger: CGCTGGAGGCTGCCAGTGCCATTCTGTCTCAGGCTG...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
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| CDS-3UTR CCA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTCAGGTGACAGCTCCCTaGTCTCTTCTACAGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QDVQFISYTKLHSVQRARQVTAP*SLLQGP Trigger: TGGCCCCTGTAGAAGAGACCAGGGAGCTGTCACCTG...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
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| CDS-3UTR GCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGACTCCGAAGGGCAAGTaGAGTGGGGGAGTTACAAGG | + |
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Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVTPKGK*SGGVTR Trigger: CCTTGTAACTCCCCCACTGCACTTGCCCTTCGGAGT...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
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| CDS-3UTR CCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGGAAGGGCAAGTGCAGTaGGGGAGTTACAAGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWEGQVQ*GSYKVR Trigger: TCTCACCTTGTAACTCCCCCACTGCACTTGCCCTTC...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
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| 3UTR CAA 72 bp | CTTGATCGTCAGCATCCTGTTTGTCTTCTGTCTGTCTaGGTGATTCTTCGACTATGTCCTTCTCGTCTAGTA | + |
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Preference number: 4 (lower is better) Translates to: LDRQHPVCLLSV*VILRLCPSRLV Trigger: TACTAGACGAGAAGGACATAGTCGAAGAATCACCAAGACAGACAGAAGACAAACAGGATGCTGACGATCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| CDS-3UTR TCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGACAGCTTCTTCTATCTaGGGACACCTGCAACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWTASSI*GHLQPR Trigger: TCTTGGTTGCAGGTGTCCTCAGATAGAAGAAGCTGT...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
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| CDS-3UTR TCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGTGTTCATTATCAGCCTaGGACAGAATGGCACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWCSLSA*DRMALA Trigger: TGCCAGTGCCATTCTGTCTCAGGCTGATAATGAACA...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
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| CDS-3UTR GCA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTTACCTGCTGTTGATTaGTCAGGTGACAGCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QDVQFISYTKLHSVQRARLPAVD*SGDSSL Trigger: CAGGGAGCTGTCACCTGAGCAATCAACAGCAGGTAA...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
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| CDS-3UTR GCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTTACCTGCTGTTGATTaGTCAGGTGACAGCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVLPAVD*SGDSSL Trigger: CAGGGAGCTGTCACCTGAGCAATCAACAGCAGGTAA...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
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| 3UTR CAA 72 bp | CTTAGCAGCACTTTCCACATTTGGGCTTCCACCTTTTaGGTGCAGACCTCTTCTTTGAGCAAGTTTAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LSSTFHIWASTF*VQTSSLSKFSK Trigger: TTTACTAAACTTGCTCAAAGAAGAGGTCTGCACCAAAAAGGTGGAAGCCCAAATGTGGAAAGTGCTGCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| CDS-3UTR TCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGTTTCCACAGGACTGCTaGAAATCTCCAAGAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWFPQDC*KSPRSF Trigger: GAAGCTTCTTGGAGATTTTCAGCAGTCCTGTGGAAA...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
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| CDS-3UTR TCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGCCACTACCATTTTCTTaGTCGTCAGCATCCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWPLPFS*SSASCL Trigger: CAAACAGGATGCTGACGATCAAGAAAATGGTAGTGG...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
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| CDS-3UTR TCA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTACAGGGGCCACATCTaGGATCTCTGCATTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QDVQFISYTKLHSVQRARYRGHI*DLCISF Trigger: GAAAGAAATGCAGAGATCTCAGATGTGGCCCCTGTA...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
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| CDS-3UTR TCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTACAGGGGCCACATCTaGGATCTCTGCATTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVYRGHI*DLCISF Trigger: GAAAGAAATGCAGAGATCTCAGATGTGGCCCCTGTA...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR GCA 90 bp | AATCACTCCAACTTGAATATCCTTTCCACAGGACTGCTGAAAATCTCCAAGAAGGTTTCCACATTAGACTaGTCATCACCAGGGCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: NHSNLNILSTGLLKISKKVSTLD*SSPGLT Trigger: AGTTAGCCCTGGTGATGAGCAGTCTAATGTGGAAAC...CTTCTTGGAGATTTTCAGCAGTCCTGTGGAAAGGATATTCAAGTTGGAGTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGACTATTTGGAACACCTaGGTCCTTCCTAGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWTIWNT*VLPRLL Trigger: AAGAAGCCTAGGAAGGACCCAGGTGTTCCAAATAGT...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226740.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGAAAGGGAGCACTATTTaGAACACCTGGGTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVKGSTI*NTWVLP Trigger: AGGAAGGACCCAGGTGTTCCAAATAGTGCTCCCTTT...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226740.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGGCTTTTCCCCACATTTaGGAAACCAATCACTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWAFPHI*ETNHSN Trigger: GTTGGAGTGATTGGTTTCCCAAATGTGGGGAAAAGC...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS-3UTR TCA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTAGTTTGTTGAGGCTTTaGACACCACGGTTGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QDVQFISYTKLHSVQRARSLLRL*TPRLAI Trigger: AATTGCCAACCGTGGTGTTCAAAGCCTCAACAAACT...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS-3UTR TCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGCCAATCACTCCAACTTaGATATCCTTTCCACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVPITPT*ISFPQD Trigger: GTCCTGTGGAAAGGATATTCAAGTTGGAGTGATTGG...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS-3UTR TCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGCCACTACCATTTTCTTaGTCGTCAGCATCCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVPLPFS*SSASCL Trigger: CAAACAGGATGCTGACGATCAAGAAAATGGTAGTGG...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR GCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGGTTTCCACATTAGACTaGTCATCACCAGGGCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVVSTLD*SSPGLT Trigger: AGTTAGCCCTGGTGATGAGCAGTCTAATGTGGAAAC...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226740.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTCCAAAGGGCTTCCTTaGCACAGCAGATTTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDVQFISYTKLHSVQRARSKGLP*HSRFCF Trigger: AAAGCAAAATCTGCTGTGGCAAGGAAGCCCTTTGGA...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS-3UTR GCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGAGAATGATTCCAGGATaGAGGGGGATGGCAATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVRMIPG*RGMAIV Trigger: TACTATTGCCATCCCCCTGCATCCTGGAATCATTCT...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTAGAATGATTCCAGGATaGAGGGGGATGGCAATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QDVQFISYTKLHSVQRARRMIPG*RGMAIV Trigger: TACTATTGCCATCCCCCTGCATCCTGGAATCATTCT...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR CCA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTAGCACTTTCCACATTTaGGCTTCCACCTTTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QDVQFISYTKLHSVQRARSTFHI*ASTFLV Trigger: CACCAAAAAGGTGGAAGCCCAAATGTGGAAAGTGCT...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGAGCACTTTCCACATTTaGGCTTCCACCTTTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVSTFHI*ASTFLV Trigger: CACCAAAAAGGTGGAAGCCCAAATGTGGAAAGTGCT...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCAGAGAATCCTTATACTCAGGGACAGTATATTTTAACACCACCTGTTAAAGGGAGCACTATTTaGAACACCTGGGTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNAENPYTQGQYILTPPVKGSTI*NTWVLP Trigger: AGGAAGGACCCAGGTGTTCCAAATAGTGCTCCCTTT...AACAGGTGGTGTTAAAATATACTGTCCCTGAGTATAAGGATTCTCTGCATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGAACCAAGAGGATCTCTaGCATCCAAAACTTCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWNQEDL*HPKLLT Trigger: TGTTAGAAGTTTTGGATGCCAGAGATCCTCTTGGTT...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS-3UTR TCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGATTCTATTAGTTAAATaGGGGCCCTTGAGGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVILLVK*GPLRTC Trigger: ACAAGTCCTCAAGGGCCCTCATTTAACTAATAGAAT...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS-3UTR GCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTCTTTGGATTCTGTTTaGCTGCTTTGGCTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVSLDSV*LLWLSF Trigger: GAAAGAAAGCCAAAGCAGGCAAACAGAATCCAAAGA...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226740.2 |
||
| CDS-3UTR GCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGTCTATGATTGTGATCTaGTTGTCTAAAGGGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWSMIVI*LSKGTI Trigger: GATTGTCCCTTTAGACAAGCAGATCACAATCATAGA...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGGCCCTTCTTCATGACTaGTGCAATATTCTCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLYHTLNYTAYREHVSVWALLHD*CNILIK Trigger: TTTAATGAGAATATTGCAGCAGTCATGAAGAAGGGC...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR GCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGCTATCAAGTTTCTGCTaGTGTTTTAGTTCTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVLSSFC*CFSSSS Trigger: GCTTGAAGAACTAAAACAGCAGCAGAAACTTGATAG...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226740.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTGCCCTTCTTCATGACTaGTGCAATATTCTCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QDVQFISYTKLHSVQRARALLHD*CNILIK Trigger: TTTAATGAGAATATTGCAGCAGTCATGAAGAAGGGC...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTCCTTCTCGTCTTGTATaGTGTGTGCATTATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDVQFISYTKLHSVQRARPSRLV*CVHYSF Trigger: AAAAGAATAATGCACACAGCATACAAGACGAGAAGG...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226379.2 |
||
| CDS-3UTR CCA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTCAGCAGATTTTGCTTTaGAATGGAACAACTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QDVQFISYTKLHSVQRARQQILL*NGTTFF Trigger: GAAGAAAGTTGTTCCATTCCAAAGCAAAATCTGCTG...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| 3UTR CAA 72 bp | TGCATGCTCCTTGTAAGTCCCATGGAAATCCCAACATaGCAAATCCATTCTTGTTTTAAGCTATTAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: CMLLVSPMEIPT*QIHSCFKLLMT Trigger: TGTCATTAATAGCTTAAAACAAGAATGGATTTGCAATGTTGGGATTTCCATGGGACTTACAAGGAGCATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
||
| CDS-3UTR GCA 90 bp | GACTTATTTAATACAAGTATCAGCTTCTTACTCCCACTCTGGATAACAGCTTCTCTATCAAGTTTCTGCTaGTGTTTTAGTTCTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLFNTSISFLLPLWITASLSSFC*CFSSSS Trigger: GCTTGAAGAACTAAAACAGCAGCAGAAACTTGATAG...AGAAGCTGTTATCCAGAGTGGGAGTAAGAAGCTGATACTTGTATTAAATAAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGACCTTTTTAAGTTCCTaGCAATGTAACTTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YSLYHTLNYTAYREHVSVTFLSS*QCNFFG Trigger: TCCAAAGAAGTTACATTGCCAGGAACTTAAAAAGGT...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226740.2 |
||
| CDS TCA 90 bp | AGTATCAGCTTCTTACTCCCACTCTGGATAACAGCTTCTTCTATCTaGGGACACCTGCAACCAAGAGGATCTCTGGCATCCAAAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SISFLLPLWITASSI*GHLQPRGSLASKTS Trigger: AGAAGTTTTGGATGCCAGAGATCCTCTTGGTTGCAGGTGTCCTCAGATAGAAGAAGCTGTTATCCAGAGTGGGAGTAAGAAGCTGATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000228341.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGTGGGCTTCCACCTTTTaGGTGCAGACCTCTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLYHTLNYTAYREHVSVWWASTF*VQTSSL Trigger: CAAAGAAGAGGTCTGCACCAAAAAGGTGGAAGCCCA...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTCGTCTAGTATTCCATTaGTCAGGCCCGAAGACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARRLVFH*SGPKTE Trigger: TTCGGTCTTCGGGCCTGACAAATGGAATACTAGACG...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS TCA 90 bp | ATTTTCTTGATCGTCAGCATCCTGTTTGTCTTCTGTCTGTCTTGGTaGTTCTTCGACTATGTCCTTCTCGTCTTGTATGCTGTGTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: IFLIVSILFVFCLSW*FFDYVLLVLYAVCI Trigger: AATGCACACAGCATACAAGACGAGAAGGACATAGTCGAAGAATCACCAAGACAGACAGAAGACAAACAGGATGCTGACGATCAAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226379.2 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTTGGCTTTCTTTCTTTaGGGCTCGTCAGATTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARLAFFL*GSSDSS Trigger: GGAGGAATCTGACGAGCCCAAAAGAAAGAAAGCCAA...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226740.2 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTTCCAAAGGGCTTCCTaGCCACAGCAGATTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARFQRAS*PQQILL Trigger: AAGCAAAATCTGCTGTGGCAAGGAAGCCCTTTGGAA...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTCAGCACTTTCCACATTaGGGCTTCCACCTTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARQHFPH*GFHLFG Trigger: ACCAAAAAGGTGGAAGCCCAAATGTGGAAAGTGCTG...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTCGTCAGCATCCTGTTaGTCTTCTGTCTGTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARSSASC*SSVCLG Trigger: ACCAAGACAGACAGAAGACAAACAGGATGCTGACGA...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR CAA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTCGTCAGCATCCTGTTaGTCTTCTGTCTGTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YSLYHTLNYTAYREHVSVSSASC*SSVCLG Trigger: ACCAAGACAGACAGAAGACAAACAGGATGCTGACGA...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTATAGGTTTCATCCTCTaGACTCGCTCTATCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARIGFIL*TRSIQG Trigger: GCCTTGGATAGAGCGAGTCAAGAGGATGAAACCTAT...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR CAA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGATAGGTTTCATCCTCTaGACTCGCTCTATCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YSLYHTLNYTAYREHVSVIGFIL*TRSIQG Trigger: GCCTTGGATAGAGCGAGTCAAGAGGATGAAACCTAT...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226379.2 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTTCTGTTTGCCTGCTTaGGCTTTCTTTCTTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARFCLPA*AFFLLG Trigger: GCCCAAAAGAAAGAAAGCCAAAGCAGGCAAACAGAA...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226740.2 |
||
| CDS-3UTR CAA 90 bp | CATTTCTTTCACCACTACCATTTTCTTGATCGTCAGCATCCTGTTTGTCTTCTGGGCAATGTAACTTCTTaGGATTCTGTTTGCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HFFHHYHFLDRQHPVCLLGNVTS*DSVCLL Trigger: AAGCAGGCAAACAGAATCCAAAGAAGTTACATTGCC...CAGAAGACAAACAGGATGCTGACGATCAAGAAAATGGTAGTGGTGAAAGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
||
| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTAAGTTTGTTGAGGCTTaGAACACCACGGTTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARKFVEA*NTTVGN Trigger: ATTGCCAACCGTGGTGTTCAAAGCCTCAACAAACTT...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGTTGCCACAGCAGATTTaGCTTTGGAATGGAACAACT | + |
|
Preference number: 5 (lower is better) Translates to: SLYHTLNYTAYREHVSVWLPQQI*LWNGTT Trigger: AGTTGTTCCATTCCAAAGCAAAATCTGCTGTGGCAA...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS-3UTR CAA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGCTTTTCCCCACATTaGGGAAACCAATCACTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: YSLYHTLNYTAYREHVSVCFSPH*GNQSLQ Trigger: TTGGAGTGATTGGTTTCCCAAATGTGGGGAAAAGCA...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
||
| CDS CCA 90 bp | ACTTCTAACACAATGTCTGAGGCTTCAATCACCTTTTTAAGTTCCTaGCAATGTAACTTCTTTGGATTCTGTTTGCCTGCTTTGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSNTMSEASITFLSS*QCNFFGFCLPALAF Trigger: GAAAGCCAAAGCAGGCAAACAGAATCCAAAGAAGTTACATTGCCAGGAACTTAAAAAGGTGATTGAAGCCTCAGACATTGTGTTAGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037739.8 ENSMUST00000227467.2 ENSMUST00000228341.2 |
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| CDS-3UTR CAA 90 bp | AAAAATGCAGAGAATCCTTATACTCAGGGACAGTATATTTTAACACCACCTGTTTTGGCTTTCTTTCTTTaGGGCTCGTCAGATTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: KNAENPYTQGQYILTPPVLAFFL*GSSDSS Trigger: GGAGGAATCTGACGAGCCCAAAAGAAAGAAAGCCAA...AACAGGTGGTGTTAAAATATACTGTCCCTGAGTATAAGGATTCTCTGCATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| CDS-3UTR CAA 90 bp | GACTTATTTAATACAAGTATCAGCTTCTTACTCCCACTCTGGATAACAGCTTCTTTCTGTTTGCCTGCTTaGGCTTTCTTTCTTTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: DLFNTSISFLLPLWITASFCLPA*AFFLLG Trigger: GCCCAAAAGAAAGAAAGCCAAAGCAGGCAAACAGAA...AGAAGCTGTTATCCAGAGTGGGAGTAAGAAGCTGATACTTGTATTAAATAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226740.2 |
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| CDS-3UTR CAA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGTTCTTTGGATTCTGTTaGCCTGCTTTGGCTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SLYHTLNYTAYREHVSVWFFGFC*PALAFF Trigger: AAAGAAAGCCAAAGCAGGCAAACAGAATCCAAAGAA...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226740.2 |
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| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTGGCAATGTAACTTCTTaGGATTCTGTTTGCCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARGNVTS*DSVCLL Trigger: AAGCAGGCAAACAGAATCCAAAGAAGTTACATTGCC...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000226740.2 |
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| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTACCAATCACTCCAACTaGAATATCCTTTCCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARTNHSN*NILSTG Trigger: TCCTGTGGAAAGGATATTCAAGTTGGAGTGATTGGT...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
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| CDS-3UTR CAA 90 bp | CAAGATGTACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTATGATTGTGATCTGCTaGTCTAAAGGGACAATCTGC | + |
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Preference number: 5 (lower is better) Translates to: QDVQFISYTKLHSVQRARMIVIC*SKGTIC Trigger: GCAGATTGTCCCTTTAGACAAGCAGATCACAATCAT...ACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTACATCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
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| CDS-3UTR CAA 90 bp | AGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTGGACAGCAGATTTTGCTTaGGAATGGAACAACTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SLYHTLNYTAYREHVSVWTADFA*EWNNFL Trigger: AAGAAAGTTGTTCCATTCCAAAGCAAAATCTGCTGT...CCACACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
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| CDS-3UTR CAA 90 bp | TACAGTTTATATCATACACTAAACTACACAGCGTACAGAGAGCACGTTAGTGTGTCTCCAAATTCTCCTTaGGTACTAGATCAGACTTAT | + |
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Preference number: 5 (lower is better) Translates to: YSLYHTLNYTAYREHVSVSPNSP*VLDQTY Trigger: ATAAGTCTGATCTAGTACCAAAGGAGAATTTGGAGA...CACACTAACGTGCTCTCTGTACGCTGTGTAGTTTAGTGTATGATATAAACTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037739.8 |
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| CDS CCA 72 bp | CTTCTATCTGAGGACACCTGCAACCAAGAGGATCTCTaGCATCCAAAACTTCTAACACAATGTCTGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLSEDTCNQEDL*HPKLLTQCLRL Trigger: AAGCCTCAGACATTGTGTTAGAAGTTTTGGATGCCAGAGATCCTCTTGGTTGCAGGTGTCCTCAGATAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037739.8 ENSMUST00000228341.2 |
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| CDS TCA 72 bp | ATCGTCAGCATCCTGTTTGTCTTCTGTCTGTCTTGGTaGTTCTTCGACTATGTCCTTCTCGTCTTGTATGCT | + |
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Preference number: 6 (lower is better) Translates to: IVSILFVFCLSW*FFDYVLLVLYA Trigger: AGCATACAAGACGAGAAGGACATAGTCGAAGAATCACCAAGACAGACAGAAGACAAACAGGATGCTGACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226379.2 |
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| CDS CAA 72 bp | CTTGATCGTCAGCATCCTGTTTGTCTTCTGTCTGTCTaGGTGATTCTTCGACTATGTCCTTCTCGTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LDRQHPVCLLSV*VILRLCPSRLV Trigger: TACAAGACGAGAAGGACATAGTCGAAGAATCACCAAGACAGACAGAAGACAAACAGGATGCTGACGATCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226379.2 |
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