Pregenerated sensors for GNL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024429Ensembl transcript IDs: ENSMUST00000087200.4
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCACAGCGGTCAGCCCACACCGACCGCTCTCACCTCAGGCCACCTaGGGAAGGGGCTACAAAGCAGACAATCTTTATTCACAATCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: PTAVSPHRPLSPQAT*GRGYKADNLYSQSG Trigger: CCCTGATTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTTCCCCAGGTGGCCTGAGGTGAGAGCGGTCGGTGTGGGCTGACCGCTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR GCA 90 bp | GGTGAGCCTGCCATAGACCTCCTCTGTCCATGGGGATTCCTAAAGTaGTATGTGAGAGAGTGGGCAGCGGCCTCAGATAGCTCTGCTTCC | + |
|
Preference number: 1 (lower is better) Translates to: GEPAIDLLCPWGFLK*YVREWAAASDSSAS Trigger: GGAAGCAGAGCTATCTGAGGCCGCTGCCCACTCTCTCACATAGCACTTTAGGAATCCCCATGGACAGAGGAGGTCTATGGCAGGCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR TCA 90 bp | GGAGAACCTTCACACACCCATCTTAATCCCAAAGTCTGTGCTCCATaGGGTCTGGGTCACGAGCAGTCCTGGCTCCGGCACCATACAAAG | + |
|
Preference number: 1 (lower is better) Translates to: GEPSHTHLNPKVCAP*GLGHEQSWLRHHTK Trigger: CTTTGTATGGTGCCGGAGCCAGGACTGCTCGTGACCCAGACCTCATGGAGCACAGACTTTGGGATTAAGATGGGTGTGTGAAGGTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR-3UTR CCA 90 bp | AGGCAAAAAGCCTCCCACAGCGGTCAGCCCACACCGACCGCTCTCACCTCAGGCTATTCACAATCAGGGTaGCAAAGGGAAGACACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RQKASHSGQPTPTALTSGYSQSG*QREDTS Trigger: GGAGGTGTCTTCCCTTTGCCACCCTGATTGTGAATA...GCCTGAGGTGAGAGCGGTCGGTGTGGGCTGACCGCTGTGGGAGGCTTTTTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR-3UTR TCA 90 bp | CGTGGTGACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGAGGACTCTGTTGAAGTaGAGGAGAGGAGGGCTAATA | + |
|
Preference number: 2 (lower is better) Translates to: RGDTPPRLLHPQSARKTKRTLLK*RRGGLI Trigger: TATTAGCCCTCCTCTCCTTCACTTCAACAGAGTCCT...CTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCACCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR-3UTR CCA 90 bp | ACACCCATCTTAATCCCAAAGTCTGTGCTCCATGAGGTCTGGGTCACGAGCAGTGACCTCCTCTGTCCATaGGGATTCCTAAAGTGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: TPILIPKSVLHEVWVTSSDLLCP*GFLKCY Trigger: ATAGCACTTTAGGAATCCCCATGGACAGAGGAGGTC...ACTGCTCGTGACCCAGACCTCATGGAGCACAGACTTTGGGATTAAGATGGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGACACAGATTTGATAAATGTTCACTGAGTCTAGAAAATCCCTATAAAAAGTGCTATGTGAGAGAGTaGGCAGCGGCCTCAGATAGC | + |
|
Preference number: 2 (lower is better) Translates to: PRHRFDKCSLSLENPYKKCYVRE*AAASDS Trigger: GCTATCTGAGGCCGCTGCCCACTCTCTCACATAGCA...CTTTTTATAGGGATTTTCTAGACTCAGTGAACATTTATCAAATCTGTGTCTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR TCA 72 bp | TCACACACCCATCTTAATCCCAAAGTCTGTGCTCCATaGGGTCTGGGTCACGAGCAGTCCTGGCTCCGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SHTHLNPKVCAP*GLGHEQSWLRH Trigger: GTGCCGGAGCCAGGACTGCTCGTGACCCAGACCTCATGGAGCACAGACTTTGGGATTAAGATGGGTGTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR CCA 72 bp | GTCAGCCCACACCGACCGCTCTCACCTCAGGCCACCTaGGGAAGGGGCTACAAAGCAGACAATCTTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: VSPHRPLSPQAT*GRGYKADNLYS Trigger: TGAATAAAGATTGTCTGCTTTGTAGCCCCTTCCCCAGGTGGCCTGAGGTGAGAGCGGTCGGTGTGGGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR GCA 72 bp | GCCATAGACCTCCTCTGTCCATGGGGATTCCTAAAGTaGTATGTGAGAGAGTGGGCAGCGGCCTCAGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: AIDLLCPWGFLK*YVREWAAASDS Trigger: GCTATCTGAGGCCGCTGCCCACTCTCTCACATAGCACTTTAGGAATCCCCATGGACAGAGGAGGTCTATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR TCA 72 bp | TCTGTTGAAGTGAAGGAGAGGAGGGCTAATACCAGGTaGGCCTGCCATAGACCTCCTCTGTCCATGGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: SVEVKERRANTR*ACHRPPLSMGI Trigger: AATCCCCATGGACAGAGGAGGTCTATGGCAGGCTCACCTGGTATTAGCCCTCCTCTCCTTCACTTCAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| 3UTR CCA 72 bp | ATACCAGGTGAGCCTGCCATAGACCTCCTCTGTCCATaGGGATTCCTAAAGTGCTATGTGAGAGAGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IPGEPAIDLLCP*GFLKCYVREWA Trigger: TGCCCACTCTCTCACATAGCACTTTAGGAATCCCCATGGACAGAGGAGGTCTATGGCAGGCTCACCTGGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | TCCGTGGTGACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCACTGCCGGCCCCACCCTaGCCTGCGACAGCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVVTHLHGSFTHKALVKPLPAPP*PATAPA Trigger: AGCTGGTGCTGTCGCAGGGCAGGGTGGGGCCGGCAG...TGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCACCACGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | TCCGTGGTGACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGCCGAAGGGTCCTCTaGCTCTGGGTGGCGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVVTHLHGSFTHKALVKPSRRVL*LWVAQV Trigger: CACCTGCGCCACCCAGAGGCAGAGGACCCTTCGGCT...TGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCACCACGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | CGTGGTGACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGCAGGCACACCAGGGGTaGTCAGCCGAAGGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGDTPPRLLHPQSARKTKQAHQG*SAEGSS Trigger: AGAGGACCCTTCGGCTGAGCACCCCTGGTGTGCCTG...CTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCACCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | CTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCAGGCAACAGGCGCTCCCGCTTGTCCTaGAGCTGCTTCTTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHGSFTHKALVKPRPGNRRSRLS*SCFFFC Trigger: GCAGAAGAAGAAGCAGCTGCAGGACAAGCGGGAGCG...CCTGTTGCCTGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | GACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCAGGAGGCCCTGGGAAGGTTaGTGGTTGAGCCTGCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: DTPPRLLHPQSARKTKARRPWEG*WLSLRI Trigger: TATCCGCAGGCTCAACCAGCAACCTTCCCAGGGCCT...CCTGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | CTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCAGGCAACAGGTCAGCACTGACCGGCTaGAACACTTGCTCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHGSFTHKALVKPRPGNRSALTG*NTCSLA Trigger: GGCCAGAGAGCAAGTGTTGCAGCCGGTCAGTGCTGA...CCTGTTGCCTGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | CGTGGTGACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGATTCCAGCCAGAACCTaGAGCTGCCTGGGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGDTPPRLLHPQSARKTKIPART*SCLGSS Trigger: GCTGCTGCCCAGGCAGCTGCAGGTTCTGGCTGGAAT...CTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCACCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | CTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCAGGCAACAGGATACCGGGTGTGGCCTaGCGTTCTGGAGACACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHGSFTHKALVKPRPGNRIPGVA*RSGDTH Trigger: GTGAGTGTCTCCAGAACGCCAGGCCACACCCGGTAT...CCTGTTGCCTGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | ACACCCATCTTAATCCCAAAGTCTGTGCTCCATGAGGTCTGGGTCACGAGCAGTTCCTCTGCCTCTGGGTaGCGCAGGTGCAGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPILIPKSVLHEVWVTSSSSASG*RRCSRA Trigger: GGCCCTGCTGCACCTGCGCCACCCAGAGGCAGAGGA...ACTGCTCGTGACCCAGACCTCATGGAGCACAGACTTTGGGATTAAGATGGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAAGGGGCTACAAAGCAGACAATCTTTATTCACAATCAGGGTGGCAAAGTCCGACGTGTCCGTCTaGTCCTCCCGCCGCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGKGLQSRQSLFTIRVAKSDVSV*SSRRSR Trigger: CCGGGAGCGGCGGGAGGAGCAGACGGACACGTCGGA...CTTTGCCACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTTCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | GTGACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCATGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTHLHGSFTHKALVKPRPCGCWN*SAAHLG Trigger: TCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCA...TGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | GTGACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCACTCTACCAGTACTGCTaGCCCGTCTTCCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTHLHGSFTHKALVKPRPLYQYC*PVFLLL Trigger: GAGGAGGAGGAAGACGGGCCAGCAGTACTGGTAGAG...TGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | TCCGTGGTGACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCATGTGGCCTGGCGTTCTaGAGACACTCACCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVVTHLHGSFTHKALVKPCGLAF*RHSPPS Trigger: GGAAGGTGGTGAGTGTCTCCAGAACGCCAGGCCACA...TGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCACCACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | CGTGGTGACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGAACACCCGCCACAGCTaGCTCCATGTCTCCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RGDTPPRLLHPQSARKTKNTRHS*LHVSRL Trigger: CAATCTGGAGACATGGAGGCAGCTGTGGCGGGTGTT...CTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCACCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | CACGAGCAGTCCTGGCTCCGGCACCATACAAAGGGTTTTGTACTTAGCACAGTCCTGCTCTGGTCCCAGTaGCCGAGTCCATCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HEQSWLRHHTKGFVLSTVLLWSQ*PSPSFP Trigger: GGGAAAGGATGGACTCGGGCACTGGGACCAGAGCAG...GACTGTGCTAAGTACAAAACCCTTTGTATGGTGCCGGAGCCAGGACTGCTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | ATCTTAATCCCAAAGTCTGTGCTCCATGAGGTCTGGGTCACGAGCAGTCCTGGCCAGGCTCTCAGCAACTaGTCTGGTCCCAGTGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ILIPKSVLHEVWVTSSPGQALSN*SGPSAR Trigger: TCGGGCACTGGGACCAGAGCAGTTGCTGAGAGCCTG...GCCAGGACTGCTCGTGACCCAGACCTCATGGAGCACAGACTTTGGGATTAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAAGGGGCTACAAAGCAGACAATCTTTATTCACAATCAGGGTGGCAAAGCTCCTCCTCATCACCTaGCGGCCCCACCCTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGKGLQSRQSLFTIRVAKLLLIT*RPHPAL Trigger: CAGGGCAGGGTGGGGCCGGCAGGTGATGAGGAGGAG...CTTTGCCACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAAGGGGCTACAAAGCAGACAATCTTTATTCACAATCAGGGTGGCAAAGTGGGGTCGTAGCCTCTaGGCCCCAGGCCCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGKGLQSRQSLFTIRVAKWGRSL*APGPGK Trigger: CTTCCCAGGGCCTGGGGCCCAGAGGCTACGACCCCA...CTTTGCCACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | GAGAACCTTCACACACCCATCTTAATCCCAAAGTCTGTGCTCCATGAGGTCTGGCCTTGTAGCGCTCCCTaGAGGGGCCTGTGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENLHTPILIPKSVLHEVWPCSAP*RGLWAP Trigger: TGGAGCCCACAGGCCCCTCCAGGGAGCGCTACAAGG...CCAGACCTCATGGAGCACAGACTTTGGGATTAAGATGGGTGTGTGAAGGTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | ACACCCATCTTAATCCCAAAGTCTGTGCTCCATGAGGTCTGGGTCACGAGCAGTGAACCTGCAGCTGCCTaGGCAGCAGCGAGGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPILIPKSVLHEVWVTSSEPAAA*AAARGR Trigger: TCTTCCCCTCGCTGCTGCCCAGGCAGCTGCAGGTTC...ACTGCTCGTGACCCAGACCTCATGGAGCACAGACTTTGGGATTAAGATGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTCCATGAGGTCTGGGTCACGAGCAGTCCTGGCTCCGGCACCATACAAACCTGGATCTGGGCAATaGGGTAGATTCCAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCSMRSGSRAVLAPAPYKPGSGQ*GRFQPE Trigger: TTCTGGCTGGAATCTACCCCATTGCCCAGATCCAGG...TTTGTATGGTGCCGGAGCCAGGACTGCTCGTGACCCAGACCTCATGGAGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR TCA 90 bp | AGGCCACCTGGGGAAGGGGCTACAAAGCAGACAATCTTTATTCACAATCAGGGTGCCCCACCAGCCCGTTaGTCAGAGAGGACTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPPGEGATKQTIFIHNQGAPPAR*SERTSP Trigger: TGGGGAAGTCCTCTCTGATCAACGGGCTGGTGGGGC...ACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTTCCCCAGGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | ATCTTAATCCCAAAGTCTGTGCTCCATGAGGTCTGGGTCACGAGCAGTCCTGGCCTGCTCTACCAGTACTaGTGGCCCGTCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILIPKSVLHEVWVTSSPGLLYQY*WPVFLL Trigger: GAGGAGGAAGACGGGCCAGCAGTACTGGTAGAGCAG...GCCAGGACTGCTCGTGACCCAGACCTCATGGAGCACAGACTTTGGGATTAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | CTACAAAGCAGACAATCTTTATTCACAATCAGGGTGGCAAAGGGAAGACACCTCTCTGGGTGGCGCAGGTaGAGCAGGGCCTGCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSRQSLFTIRVAKGRHLSGWRR*SRACTG Trigger: CCCCGTGCAGGCCCTGCTGCACCTGCGCCACCCAGA...GAGGTGTCTTCCCTTTGCCACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | ACACCCATCTTAATCCCAAAGTCTGTGCTCCATGAGGTCTGGGTCACGAGCAGTTACCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPILIPKSVLHEVWVTSSYRCGC*NWSAAH Trigger: ATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTA...ACTGCTCGTGACCCAGACCTCATGGAGCACAGACTTTGGGATTAAGATGGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | CTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCAGGCAACAGGCTCGTAAAGTGCTGGTaGGAAGTTCACAACCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LHGSFTHKALVKPRPGNRLVKCW*EVHNRM Trigger: CATCCGGTTGTGAACTTCCCACCAGCACTTTACGAG...CCTGTTGCCTGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR TCA 90 bp | AGACCTCCTCTGTCCATGGGGATTCCTAAAGTGCTATGTGAGAGAGTGGGCAGCAGGACTGAGCCAGGCTaGTACACTTCCCGGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPPLSMGIPKVLCERVGSRTEPG*YTSRIS Trigger: GGATATCCGGGAAGTGTATCAGCCTGGCTCAGTCCT...GCTGCCCACTCTCTCACATAGCACTTTAGGAATCCCCATGGACAGAGGAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR TCA 90 bp | ATCTTAATCCCAAAGTCTGTGCTCCATGAGGTCTGGGTCACGAGCAGTCCTGGCGGGAAAGTCCAGGACTaGGCCAGGCTGATACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILIPKSVLHEVWVTSSPGGKVQD*ARLIHF Trigger: GAAGTGTATCAGCCTGGCTCAGTCCTGGACTTTCCC...GCCAGGACTGCTCGTGACCCAGACCTCATGGAGCACAGACTTTGGGATTAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | ATCTTAATCCCAAAGTCTGTGCTCCATGAGGTCTGGGTCACGAGCAGTCCTGGCTCTTCTCGCGCCAGCTaGTCAAGTCCACTTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILIPKSVLHEVWVTSSPGSSRAS*SSPLSP Trigger: TGGGGAAAGTGGACTTGAGCAGCTGGCGCGAGAAGA...GCCAGGACTGCTCGTGACCCAGACCTCATGGAGCACAGACTTTGGGATTAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | CTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCAGGCAACAGGAGGACTTCCCCACATTaGGGAAACCTATACAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LHGSFTHKALVKPRPGNRRTSPH*GNLYSQ Trigger: TTGGCTGTATAGGTTTCCCCAATGTGGGGAAGTCCT...CCTGTTGCCTGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | GGGGAAGGGGCTACAAAGCAGACAATCTTTATTCACAATCAGGGTGGCAAAGGGCGACAGCACCAGCTCTaGAGTCTCTGGGTGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GEGATKQTIFIHNQGGKGRQHQL*SLWVRL Trigger: GAGTCTCACCCAGAGACTGCAGAGCTGGTGCTGTCG...CCCTTTGCCACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | AAGGGGCTACAAAGCAGACAATCTTTATTCACAATCAGGGTGGCAAAGGGAAGAGAGCGCAGCCCATCTTaGAGCCCTCGCTTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGLQSRQSLFTIRVAKGRERSPS*SPRFRS Trigger: GGAGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTC...TCTTCCCTTTGCCACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAAGGGGCTACAAAGCAGACAATCTTTATTCACAATCAGGGTGGCAAAGTCTCAGCAACTGCTCTaGTCCCAGTGCCCGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKGLQSRQSLFTIRVAKSQQLL*SQCPSP Trigger: TGGACTCGGGCACTGGGACCAGAGCAGTTGCTGAGA...CTTTGCCACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTTCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | AAGGGGCTACAAAGCAGACAATCTTTATTCACAATCAGGGTGGCAAAGGGAAGAGGCCTGTGGGCTCCATaGCTGAGTCGGTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGLQSRQSLFTIRVAKGRGLWAP*LSRSAA Trigger: AGCAGCTGACCGACTCAGCCATGGAGCCCACAGGCC...TCTTCCCTTTGCCACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR TCA 90 bp | CCAGAATTTGGAGAACCTTCACACACCCATCTTAATCCCAAAGTCTGTGCTCCAGGGAAGGTTGCTGGTTaGGCCTGCGGATATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PEFGEPSHTHLNPKVCAPGKVAG*ACGYDG Trigger: CCCATCATATCCGCAGGCTCAACCAGCAACCTTCCC...TGGAGCACAGACTTTGGGATTAAGATGGGTGTGTGAAGGTTCTCCAAATTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CCA 90 bp | CTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCAGGCAACAGGTCATTAGCTGTTCCTTaGACATCTCATAACTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHGSFTHKALVKPRPGNRSLAVP*TSHNSK Trigger: CTTGGAGTTATGAGATGTCCAAGGAACAGCTAATGA...CCTGTTGCCTGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR TCA 90 bp | CCAGAATTTGGAGAACCTTCACACACCCATCTTAATCCCAAAGTCTGTGCTCCATTGAGCCTGCGGATATaGTGGGTCACGGATTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEFGEPSHTHLNPKVCAPLSLRI*WVTDSP Trigger: TGGGGAATCCGTGACCCATCATATCCGCAGGCTCAA...TGGAGCACAGACTTTGGGATTAAGATGGGTGTGTGAAGGTTCTCCAAATTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR TCA 90 bp | AGACCTCCTCTGTCCATGGGGATTCCTAAAGTGCTATGTGAGAGAGTGGGCAGCTGTGCTCAAAGTAGCTaGGTTTCTCTGAAGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: RPPLSMGIPKVLCERVGSCAQSS*VSLKCM Trigger: CATACACTTCAGAGAAACTCAGCTACTTTGAGCACA...GCTGCCCACTCTCTCACATAGCACTTTAGGAATCCCCATGGACAGAGGAGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGACACAGATTTGATAAATGTTCACTGAGTCTAGAAAATCCCTATAAAAAGGGTGAGACTCCCAGGTaGCTCTCTGTTCGCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRHRFDKCSLSLENPYKKGETPR*LSVRCN Trigger: GTTACAGCGAACAGAGAGGCACCTGGGAGTCTCACC...CTTTTTATAGGGATTTTCTAGACTCAGTGAACATTTATCAAATCTGTGTCTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | TGTCCGTCTGCTCCTCCCGCCGCTCCCGGCTACCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCATCTTGGAGCCCTCGCTTCCGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CPSAPPAAPGYRCGC*NWSAAHLGALASAP Trigger: GGGAGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTAGCCGGGAGCGGCGGGAGGAGCAGACGGACA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | GTCCCAGGCACACCAGGGGTGCTCAGCCGAAGGGTCCTCTGCCTCTaGGTGGCGCAGGTGCAGCAGGGCCTGCACGGGGATTCTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPGTPGVLSRRVLCL*VAQVQQGLHGDSGG Trigger: GCCTCCAGAATCCCCGTGCAGGCCCTGCTGCACCTGCGCCACCCAGAGGCAGAGGACCCTTCGGCTGAGCACCCCTGGTGTGCCTGGGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 90 bp | CATCCGACGTGTCCGTCTGCTCCTCCCGCCGCTCCCGGCTACCGCTaGGGCTGTTGGAACTGGAGCGCAGCCCATCTTGGAGCCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HPTCPSAPPAAPGYR*GCWNWSAAHLGALA Trigger: AGCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTAGCCGGGAGCGGCGGGAGGAGCAGACGGACACGTCGGATG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | TCTGCTCCTCCCGCCGCTCCCGGCTACCGCTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGGAGCCCTCGCTTCCGCTCCCGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAPPAAPGYRCGCWN*SAAHLGALASAPAC Trigger: ACAAGCGGGAGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTAGCCGGGAGCGGCGGGAGGAGCAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | TCCCGGCTACCGCTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTTaGAGCCCTCGCTTCCGCTCCCGCTTGTCCTGCAGCTGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRLPLRLLELERSPS*SPRFRSRLSCSCFF Trigger: GAAGAAGCAGCTGCAGGACAAGCGGGAGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTAGCCGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | CCACCTCCTCCCGGCTGTCCCGTTCAAAATGCAGCCGGTATCGGTTaGGGTCGTAGCCTCTGGGCCCCAGGCCCTGGGAAGGTTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPPPGCPVQNAAGIG*GRSLWAPGPGKVAG Trigger: ACCAGCAACCTTCCCAGGGCCTGGGGCCCAGAGGCTACGACCCCAACCGATACCGGCTGCATTTTGAACGGGACAGCCGGGAGGAGGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | TGCCGGCCCCACCCTGCCCTGCGACAGCACCAGCTCTGCAGTCTCTaGGTGAGACTCCCAGGTGCCTCTCTGTTCGCTGTAACCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRPHPALRQHQLCSL*VRLPGASLFAVTRR Trigger: CCTCCTGGTTACAGCGAACAGAGAGGCACCTGGGAGTCTCACCCAGAGACTGCAGAGCTGGTGCTGTCGCAGGGCAGGGTGGGGCCGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 90 bp | CTGGGCCCCAGGCCCTGGGAAGGTTGCTGGTTGAGCCTGCGGATATaGTGGGTCACGGATTCCCCATCCGACGTGTCCGTCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGPRPWEGCWLSLRI*WVTDSPSDVSVCSS Trigger: GGAGGAGCAGACGGACACGTCGGATGGGGAATCCGTGACCCATCATATCCGCAGGCTCAACCAGCAACCTTCCCAGGGCCTGGGGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 90 bp | CCCATCCTTGTAGCGCTCCCTGGAGGGGCCTGTGGGCTCCATGGCTaGGTCGGTCAGCTGCTCTACCAGTACTGCTGGCCCGTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PILVALPGGACGLHG*VGQLLYQYCWPVFL Trigger: GAGGAAGACGGGCCAGCAGTACTGGTAGAGCAGCTGACCGACTCAGCCATGGAGCCCACAGGCCCCTCCAGGGAGCGCTACAAGGATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 90 bp | CGTTTCTCTGCCCAAGCTTCACAGATGTCCCAGGCACACCAGGGGTaGTCAGCCGAAGGGTCCTCTGCCTCTGGGTGGCGCAGGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFSAQASQMSQAHQG*SAEGSSASGWRRCS Trigger: GCTGCACCTGCGCCACCCAGAGGCAGAGGACCCTTCGGCTGAGCACCCCTGGTGTGCCTGGGACATCTGTGAAGCTTGGGCAGAGAAACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 90 bp | CTCATCACCTGCCGGCCCCACCCTGCCCTGCGACAGCACCAGCTCTaGAGTCTCTGGGTGAGACTCCCAGGTGCCTCTCTGTTCGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LITCRPHPALRQHQL*SLWVRLPGASLFAV Trigger: TACAGCGAACAGAGAGGCACCTGGGAGTCTCACCCAGAGACTGCAGAGCTGGTGCTGTCGCAGGGCAGGGTGGGGCCGGCAGGTGATGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 90 bp | ACAGGAGCTGCTCAGTTCCTCCTCCTCTTCCTCCTCCTCATCACCTaGCGGCCCCACCCTGCCCTGCGACAGCACCAGCTCTGCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGAAQFLLLFLLLIT*RPHPALRQHQLCSL Trigger: GAGACTGCAGAGCTGGTGCTGTCGCAGGGCAGGGTGGGGCCGGCAGGTGATGAGGAGGAGGAAGAGGAGGAGGAACTGAGCAGCTCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CAA 90 bp | CTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCAGGCAACAGGGGAGCGCAGCCCATCTaGGAGCCCTCGCTTCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHGSFTHKALVKPRPGNRGAQPI*EPSLPL Trigger: GAGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTCC...CCTGTTGCCTGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | AGGCCAGGTAGCCCACAGAAGTGTAGGGCTCCTGGATCTGGGCAATaGGGTAGATTCCAGCCAGAACCTGCAGCTGCCTGGGCAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPGSPQKCRAPGSGQ*GRFQPEPAAAWAAA Trigger: CGCTGCTGCCCAGGCAGCTGCAGGTTCTGGCTGGAATCTACCCCATTGCCCAGATCCAGGAGCCCTACACTTCTGTGGGCTACCTGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 90 bp | GAGCGCAGCCCATCTTGGAGCCCTCGCTTCCGCTCCCGCTTGTCCTaGAGCTGCTTCTTCTTCTGCTTCACGCTGAAGGGCTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ERSPSWSPRFRSRLS*SCFFFCFTLKGFFL Trigger: GAGGAAGAAGCCCTTCAGCGTGAAGCAGAAGAAGAAGCAGCTGCAGGACAAGCGGGAGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CAA 90 bp | GACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGGCCAGGCAGGCCCTGGGAAGGTaGCTGGTTGAGCCTGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DTPPRLLHPQSARKTKARQALGR*LVEPAD Trigger: ATCCGCAGGCTCAACCAGCAACCTTCCCAGGGCCTG...CCTGGCCTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CAA 90 bp | CGTGGTGACACACCTCCACGGCTCCTTCACCCACAAAGCGCTCGTAAAACCAAGCGCTTCCGCTCCCGCTaGTCCTGCAGCTGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGDTPPRLLHPQSARKTKRFRSR*SCSCFF Trigger: GAAGAAGCAGCTGCAGGACAAGCGGGAGCGGAAGCG...CTTGGTTTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCACCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 90 bp | AGGTGCCTCTCTGTTCGCTGTAACCAGGAGGGTAGAAACATAGGCTaGGGCGGCCATCCACTGCCAGGCGAAGTAGGCTATTGGCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RCLSVRCNQEGRNIG*GGHPLPGEVGYWPL Trigger: GAGCGGCCAATAGCCTACTTCGCCTGGCAGTGGATGGCCGCCTCAGCCTATGTTTCTACCCTCCTGGTTACAGCGAACAGAGAGGCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 90 bp | AAGTCCACTTTCCCCACAGTGATAGCTTCACAGGCTCTCAGCAACTaGTCTGGTCCCAGTGCCCGAGTCCATCCTTTCCCCCGTCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KSTFPTVIASQALSN*SGPSARVHPFPRLR Trigger: TCGGAGACGGGGGAAAGGATGGACTCGGGCACTGGGACCAGAGCAGTTGCTGAGAGCCTGTGAAGCTATCACTGTGGGGAAAGTGGACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | GGTATTCCTGGAAGCTCCGCTCCTCCTGGCTCATTAGCTGTTCCTTaGACATCTCATAACTCCAAGGAGGCCGCCGGGGAAAGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GIPGSSAPPGSLAVP*TSHNSKEAAGESPG Trigger: TCCTGGACTTTCCCCGGCGGCCTCCTTGGAGTTATGAGATGTCCAAGGAACAGCTAATGAGCCAGGAGGAGCGGAGCTTCCAGGAATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | CACTTTCCCCACAGTGATAGCTTCACAGGCTCTCAGCAACTGCTCTaGTCCCAGTGCCCGAGTCCATCCTTTCCCCCGTCTCCGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HFPHSDSFTGSQQLL*SQCPSPSFPPSPIL Trigger: AAGAATCGGAGACGGGGGAAAGGATGGACTCGGGCACTGGGACCAGAGCAGTTGCTGAGAGCCTGTGAAGCTATCACTGTGGGGAAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 90 bp | CACAGTGATAGCTTCACAGGCTCTCAGCAACTGCTCTGGTCCCAGTaGCCGAGTCCATCCTTTCCCCCGTCTCCGATTCTTCTTCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HSDSFTGSQQLLWSQ*PSPSFPPSPILLQD Trigger: GTCTTGAAGAAGAATCGGAGACGGGGGAAAGGATGGACTCGGGCACTGGGACCAGAGCAGTTGCTGAGAGCCTGTGAAGCTATCACTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 90 bp | TACACTTCCCGGATATCCAACTCTAACACTTCAGCACTGACCGGCTaGAACACTTGCTCTCTGGCCGCTCTCTTTCTCCTCTCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YTSRISNSNTSALTG*NTCSLAALFLLSTS Trigger: GGAGGTGGAGAGGAGAAAGAGAGCGGCCAGAGAGCAAGTGTTGCAGCCGGTCAGTGCTGAAGTGTTAGAGTTGGATATCCGGGAAGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 90 bp | CAGGCTGATACACTTCCCGGATATCCAACTCTAACACTTCAGCACTaGCCGGCTGCAACACTTGCTCTCTGGCCGCTCTCTTTCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QADTLPGYPTLTLQH*PAATLALWPLSFSS Trigger: AGAGGAGAAAGAGAGCGGCCAGAGAGCAAGTGTTGCAGCCGGTCAGTGCTGAAGTGTTAGAGTTGGATATCCGGGAAGTGTATCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 90 bp | CAGCACCAGGGCCAGCCCAAGCTCTCCAGTTACATACTCGTAAAGTaGTGGTGGGAAGTTCACAACCGGATGTCGGATGTCAGTAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: QHQGQPKLSSYILVK*WWEVHNRMSDVSNE Trigger: CTCATTACTGACATCCGACATCCGGTTGTGAACTTCCCACCAGCACTTTACGAGTATGTAACTGGAGAGCTTGGGCTGGCCCTGGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | CACCAGGGCCAGCCCAAGCTCTCCAGTTACATACTCGTAAAGTGCTaGTGGGAAGTTCACAACCGGATGTCGGATGTCAGTAATGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HQGQPKLSSYILVKC*WEVHNRMSDVSNEQ Trigger: CTGCTCATTACTGACATCCGACATCCGGTTGTGAACTTCCCACCAGCACTTTACGAGTATGTAACTGGAGAGCTTGGGCTGGCCCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CAA 90 bp | CTACAAAGCAGACAATCTTTATTCACAATCAGGGTGGCAAAGGGAAGACACCTCCTACCGCTGCGGCTGTaGGAACTGGAGCGCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQSRQSLFTIRVAKGRHLLPLRL*ELERSP Trigger: TGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTAG...GAGGTGTCTTCCCTTTGCCACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | AGTTTCTCTGAAGTGTATGCCCCGTGTATCTTCCCAAGGTATTCCTaGAAGCTCCGCTCCTCCTGGCTCATTAGCTGTTCCTTGGACATC | + |
|
Preference number: 5 (lower is better) Translates to: SFSEVYAPCIFPRYS*KLRSSWLISCSLDI Trigger: GATGTCCAAGGAACAGCTAATGAGCCAGGAGGAGCGGAGCTTCCAGGAATACCTTGGGAAGATACACGGGGCATACACTTCAGAGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 90 bp | GAAGTAGGCTATTGGCCGCTCTGTACACGTCATTTCGAGCTGCCTTaGCCGTTTTATAACCACGTTTCTCTGCCCAAGCTTCACAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: EVGYWPLCTRHFELP*PFYNHVSLPKLHRC Trigger: ACATCTGTGAAGCTTGGGCAGAGAAACGTGGTTATAAAACGGCCAAGGCAGCTCGAAATGACGTGTACAGAGCGGCCAATAGCCTACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 90 bp | CTGCCTCCATGTCTCCAGATTGTGCTCAAAGTAGCTGAGTTTCTCTaGAGTGTATGCCCCGTGTATCTTCCCAAGGTATTCCTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPPCLQIVLKVAEFL*SVCPVYLPKVFLEA Trigger: AGCTTCCAGGAATACCTTGGGAAGATACACGGGGCATACACTTCAGAGAAACTCAGCTACTTTGAGCACAATCTGGAGACATGGAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS-3UTR CAA 90 bp | AAGGGGCTACAAAGCAGACAATCTTTATTCACAATCAGGGTGGCAAAGGGAAGAGAGGACTTCCCCACATaGGGGAAACCTATACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KGLQSRQSLFTIRVAKGREDFPT*GKPIQP Trigger: TGGCTGTATAGGTTTCCCCAATGTGGGGAAGTCCTC...TCTTCCCTTTGCCACCCTGATTGTGAATAAAGATTGTCTGCTTTGTAGCCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | CCCGCCGCTCCCGGCTACCGCTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGGAGCCCTCGCTTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PAAPGYRCGCWN*SAAHLGALASA Trigger: AGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTAGCCGGGAGCGGCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | GCTCCTCCCGCCGCTCCCGGCTACCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCATCTTGGAGCCCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: APPAAPGYRCGC*NWSAAHLGALA Trigger: AGCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTAGCCGGGAGCGGCGGGAGGAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CAA 72 bp | TGCTCCTCCCGCCGCTCCCGGCTACCGCTGCGGCTGTaGGAACTGGAGCGCAGCCCATCTTGGAGCCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: CSSRRSRLPLRL*ELERSPSWSPR Trigger: GCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTAGCCGGGAGCGGCGGGAGGAGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CAA 90 bp | GTGTCCGTCTGCTCCTCCCGCCGCTCCCGGCTACCGCTGCGGCTGTaGGAACTGGAGCGCAGCCCATCTTGGAGCCCTCGCTTCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSVCSSRRSRLPLRL*ELERSPSWSPRFRS Trigger: GGAGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTAGCCGGGAGCGGCGGGAGGAGCAGACGGACAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | CCGCTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTTaGAGCCCTCGCTTCCGCTCCCGCTTGTCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLRLLELERSPS*SPRFRSRLSCS Trigger: GCTGCAGGACAAGCGGGAGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 72 bp | GTAGCGCTCCCTGGAGGGGCCTGTGGGCTCCATGGCTaGGTCGGTCAGCTGCTCTACCAGTACTGCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VALPGGACGLHG*VGQLLYQYCWP Trigger: GGGCCAGCAGTACTGGTAGAGCAGCTGACCGACTCAGCCATGGAGCCCACAGGCCCCTCCAGGGAGCGCTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 72 bp | GCCCAAGCTTCACAGATGTCCCAGGCACACCAGGGGTaGTCAGCCGAAGGGTCCTCTGCCTCTGGGTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AQASQMSQAHQG*SAEGSSASGWR Trigger: GCGCCACCCAGAGGCAGAGGACCCTTCGGCTGAGCACCCCTGGTGTGCCTGGGACATCTGTGAAGCTTGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | CCCGGCTGTCCCGTTCAAAATGCAGCCGGTATCGGTTaGGGTCGTAGCCTCTGGGCCCCAGGCCCTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGCPVQNAAGIG*GRSLWAPGPGK Trigger: CTTCCCAGGGCCTGGGGCCCAGAGGCTACGACCCCAACCGATACCGGCTGCATTTTGAACGGGACAGCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CAA 72 bp | ACCGCTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTaGGAGCCCTCGCTTCCGCTCCCGCTTGTCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TAAAVGTGAQPI*EPSLPLPLVLQ Trigger: CTGCAGGACAAGCGGGAGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CAA 90 bp | CTCCCGGCTACCGCTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTaGGAGCCCTCGCTTCCGCTCCCGCTTGTCCTGCAGCTGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPATAAAVGTGAQPI*EPSLPLPLVLQLLL Trigger: AAGAAGCAGCTGCAGGACAAGCGGGAGCGGAAGCGAGGGCTCCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGTAGCCGGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CAA 72 bp | GGGGTCGTAGCCTCTGGGCCCCAGGCCCTGGGAAGGTaGCTGGTTGAGCCTGCGGATATGATGGGTCACGGA | + |
|
Preference number: 6 (lower is better) Translates to: GVVASGPQALGR*LVEPADMMGHG Trigger: TCCGTGACCCATCATATCCGCAGGCTCAACCAGCAACCTTCCCAGGGCCTGGGGCCCAGAGGCTACGACCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 72 bp | AGGCCCTGGGAAGGTTGCTGGTTGAGCCTGCGGATATaGTGGGTCACGGATTCCCCATCCGACGTGTCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RPWEGCWLSLRI*WVTDSPSDVSV Trigger: GACGGACACGTCGGATGGGGAATCCGTGACCCATCATATCCGCAGGCTCAACCAGCAACCTTCCCAGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 72 bp | CCATCTTGGAGCCCTCGCTTCCGCTCCCGCTTGTCCTaGAGCTGCTTCTTCTTCTGCTTCACGCTGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSWSPRFRSRLS*SCFFFCFTLKG Trigger: GCCCTTCAGCGTGAAGCAGAAGAAGAAGCAGCTGCAGGACAAGCGGGAGCGGAAGCGAGGGCTCCAAGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | AGCCCACAGAAGTGTAGGGCTCCTGGATCTGGGCAATaGGGTAGATTCCAGCCAGAACCTGCAGCTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPQKCRAPGSGQ*GRFQPEPAAAW Trigger: CCAGGCAGCTGCAGGTTCTGGCTGGAATCTACCCCATTGCCCAGATCCAGGAGCCCTACACTTCTGTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CAA 72 bp | CTGAGGCGGCCATCCACTGCCAGGCGAAGTAGGCTATaGGCCGCTCTGTACACGTCATTTCGAGCTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRRPSTARRSRL*AALYTSFRAAL Trigger: CAAGGCAGCTCGAAATGACGTGTACAGAGCGGCCAATAGCCTACTTCGCCTGGCAGTGGATGGCCGCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 72 bp | AGCTTCACAGGCTCTCAGCAACTGCTCTGGTCCCAGTaGCCGAGTCCATCCTTTCCCCCGTCTCCGATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFTGSQQLLWSQ*PSPSFPPSPIL Trigger: AAGAATCGGAGACGGGGGAAAGGATGGACTCGGGCACTGGGACCAGAGCAGTTGCTGAGAGCCTGTGAAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | CACAGTGATAGCTTCACAGGCTCTCAGCAACTGCTCTaGTCCCAGTGCCCGAGTCCATCCTTTCCCCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HSDSFTGSQQLL*SQCPSPSFPPS Trigger: AGACGGGGGAAAGGATGGACTCGGGCACTGGGACCAGAGCAGTTGCTGAGAGCCTGTGAAGCTATCACTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | GGTCAGAAAGTAGGTCTGAAAATACCGGGTGTGGCCTaGCGTTCTGGAGACACTCACCACCTTCCGCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GQKVGLKIPGVA*RSGDTHHLPPH Trigger: GTGGGGCGGAAGGTGGTGAGTGTCTCCAGAACGCCAGGCCACACCCGGTATTTTCAGACCTACTTTCTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 72 bp | GGAGGCCGCCGGGGAAAGTCCAGGACTGAGCCAGGCTaGTACACTTCCCGGATATCCAACTCTAACACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GGRRGKSRTEPG*YTSRISNSNTS Trigger: TGAAGTGTTAGAGTTGGATATCCGGGAAGTGTATCAGCCTGGCTCAGTCCTGGACTTTCCCCGGCGGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CAA 90 bp | AAACATAGGCTGAGGCGGCCATCCACTGCCAGGCGAAGTAGGCTATaGGCCGCTCTGTACACGTCATTTCGAGCTGCCTTGGCCGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: KHRLRRPSTARRSRL*AALYTSFRAALAVL Trigger: TAAAACGGCCAAGGCAGCTCGAAATGACGTGTACAGAGCGGCCAATAGCCTACTTCGCCTGGCAGTGGATGGCCGCCTCAGCCTATGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 72 bp | TCTGTTCGCTGTAACCAGGAGGGTAGAAACATAGGCTaGGGCGGCCATCCACTGCCAGGCGAAGTAGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: SVRCNQEGRNIG*GGHPLPGEVGY Trigger: ATAGCCTACTTCGCCTGGCAGTGGATGGCCGCCTCAGCCTATGTTTCTACCCTCCTGGTTACAGCGAACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | TCTCCGATTCTTCTTCAAGACACCACCAGGCTCCTGTaGAGTGCGCGTGTCCCGAGGGAAAGAGGTGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: SPILLQDTTRLL*SARVPRERGEQ Trigger: TTGTTCACCTCTTTCCCTCGGGACACGCGCACTCCACAGGAGCCTGGTGGTGTCTTGAAGAAGAATCGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CAA 72 bp | GGTTTCGGGCTGTTAGGCAGGACCCAGGATCTGAAGTaGGGGTGTCCTCATCTCCTTCTCCCTCTTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GFGLLGRTQDLK*GCPHLLLPLHL Trigger: CAGATGAAGAGGGAGAAGGAGATGAGGACACCCCAACTTCAGATCCTGGGTCCTGCCTAACAGCCCGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS GCA 72 bp | CGGATATCCAACTCTAACACTTCAGCACTGACCGGCTaGAACACTTGCTCTCTGGCCGCTCTCTTTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RISNSNTSALTG*NTCSLAALFLL Trigger: GAGGAGAAAGAGAGCGGCCAGAGAGCAAGTGTTGCAGCCGGTCAGTGCTGAAGTGTTAGAGTTGGATATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | GAAGTGTATGCCCCGTGTATCTTCCCAAGGTATTCCTaGAAGCTCCGCTCCTCCTGGCTCATTAGCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EVYAPCIFPRYS*KLRSSWLISCS Trigger: GGAACAGCTAATGAGCCAGGAGGAGCGGAGCTTCCAGGAATACCTTGGGAAGATACACGGGGCATACACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 72 bp | GCTGCCTCCATGTCTCCAGATTGTGCTCAAAGTAGCTaGGTTTCTCTGAAGTGTATGCCCCGTGTATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AASMSPDCAQSS*VSLKCMPRVSS Trigger: GGAAGATACACGGGGCATACACTTCAGAGAAACTCAGCTACTTTGAGCACAATCTGGAGACATGGAGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | TATTGGCCGCTCTGTACACGTCATTTCGAGCTGCCTTaGCCGTTTTATAACCACGTTTCTCTGCCCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: YWPLCTRHFELP*PFYNHVSLPKL Trigger: AAGCTTGGGCAGAGAAACGTGGTTATAAAACGGCCAAGGCAGCTCGAAATGACGTGTACAGAGCGGCCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS CCA 72 bp | CCCAAGCTCTCCAGTTACATACTCGTAAAGTGCTGGTaGGAAGTTCACAACCGGATGTCGGATGTCAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: PKLSSYILVKCW*EVHNRMSDVSN Trigger: ATTACTGACATCCGACATCCGGTTGTGAACTTCCCACCAGCACTTTACGAGTATGTAACTGGAGAGCTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||
| CDS TCA 72 bp | TGTCTCCAGATTGTGCTCAAAGTAGCTGAGTTTCTCTaGAGTGTATGCCCCGTGTATCTTCCCAAGGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: CLQIVLKVAEFL*SVCPVYLPKVF Trigger: GAATACCTTGGGAAGATACACGGGGCATACACTTCAGAGAAACTCAGCTACTTTGAGCACAATCTGGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087200.4 |
||