Pregenerated sensors for GNGT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038811Ensembl transcript IDs: ENSMUST00000036088.11, ENSMUST00000100532.10, ENSMUST00000107708.2, ENSMUST00000107709.8, ENSMUST00000107711.8, ENSMUST00000107712.8, ENSMUST00000107714.9
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCTCAGCATCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATACACTTGGGCGTGGCTaGGGAGGGACAGAGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: FSASLFVSKRKKTLVLRYTLGRG*GGTERV Trigger: CACCCTCTCTGTCCCTCCTCAGCCACGCCCAAGTGT...ATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGATGCTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGCATCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCAGTACACTTGGGCGTaGCTGAGGAGGGACAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SQHLYLCLRGRKHWSLGIQYTWA*LRRDRE Trigger: CTCTCTGTCCCTCCTCAGCCACGCCCAAGTGTACTG...GATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGATGCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTCAGCATCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCAGTACACTTGGGCGTaGCTGAGGAGGGACAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: FSASLFVSKRKKTLVLRYQYTWA*LRRDRE Trigger: CTCTCTGTCCCTCCTCAGCCACGCCCAAGTGTACTG...ATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGATGCTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR TCA 90 bp | TTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGGGCCTTCTGGGATGCCTTTaGGAAGAGGGTCTGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LCLRGRKHWSLGIPVHLGLLGCL*EEGLSL Trigger: CAGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAG...GCCCAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR GCA 90 bp | TTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGGGCACTTCCTTCTTCAGCTaGTCCACCTCCATCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRGRKHWSLGIPVHLGTSFFS*STSILN Trigger: GTTGAGGATGGAGGTGGAGCAGCTGAAGAAGGAAGT...GCCCAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR TCA 90 bp | TTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTCTTCTGGGATGCCTTTaGGAAGAGGGTCTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFVSKRKKTLVLRYPSTLLLGCL*EEGLSL Trigger: CAGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAG...AAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CCA 90 bp | TGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGGGCGTGGGAAATCAGATCACGTaGGTTCTTCACTTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLRGRKHWSLGIPVHLGVGNQIT*VLHFLL Trigger: AAGAAGGAAGTGAAGAACCCACGTGATCTGATTTCC...CACGCCCAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR GCA 90 bp | CTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACACTTCCTTCTTCAGCTaGTCCACCTCCATCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYLCLRGRKHWSLGIPVHTSFFS*STSILN Trigger: GTTGAGGATGGAGGTGGAGCAGCTGAAGAAGGAAGT...GTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR GCA 90 bp | TATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGACTTCCTTCTTCAGCTaGTCCACCTCCATCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLCLRGRKHWSLGIPVHLTSFFS*STSILN Trigger: GTTGAGGATGGAGGTGGAGCAGCTGAAGAAGGAAGT...CAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CCA 90 bp | TTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGGGCGGAAATCAGATCACGTaGGTTCTTCACTTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRGRKHWSLGIPVHLGGNQIT*VLHFLL Trigger: AAGAAGGAAGTGAAGAACCCACGTGATCTGATTTCC...GCCCAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR GCA 90 bp | TCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACAACTTCCTTCTTCAGCTaGTCCACCTCCATCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLFVSKRKKTLVLRYPSTTSFFS*STSILN Trigger: GTTGAGGATGGAGGTGGAGCAGCTGAAGAAGGAAGT...TGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR GCA 90 bp | TTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTACTTCCTTCTTCAGCTaGTCCACCTCCATCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFVSKRKKTLVLRYPSTLTSFFS*STSILN Trigger: GTTGAGGATGGAGGTGGAGCAGCTGAAGAAGGAAGT...AAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR TCA 90 bp | TATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGCCTCTACATAATCCTTaGTTTCCTTTCCTGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLCLRGRKHWSLGIPVHLPLHNP*FPFLSW Trigger: CCAAGACAGGAAAGGAAATCAAGGATTATGTAGAGG...CAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CCA 90 bp | CTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACGGAAATCAGATCACGTaGGTTCTTCACTTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYLCLRGRKHWSLGIPVHGNQIT*VLHFLL Trigger: AAGAAGGAAGTGAAGAACCCACGTGATCTGATTTCC...GTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CCA 90 bp | CTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTTCCTTTCCTGTCTTaGAAATCAGATCACGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYLCLRGRKHWSLGIPVHFPFLS*KSDHVG Trigger: ACCCACGTGATCTGATTTCCAAGACAGGAAAGGAAA...GTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CCA 90 bp | TATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGTTTCCTTTCCTGTCTTaGAAATCAGATCACGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLCLRGRKHWSLGIPVHLFPFLS*KSDHVG Trigger: ACCCACGTGATCTGATTTCCAAGACAGGAAAGGAAA...CAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR TCA 90 bp | TTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTCCTCTACATAATCCTTaGTTTCCTTTCCTGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFVSKRKKTLVLRYPSTLPLHNP*FPFLSW Trigger: CCAAGACAGGAAAGGAAATCAAGGATTATGTAGAGG...AAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CCA 90 bp | TTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGGAAATCAGATCACGTaGGTTCTTCACTTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFVSKRKKTLVLRYPSTLGNQIT*VLHFLL Trigger: AAGAAGGAAGTGAAGAACCCACGTGATCTGATTTCC...AAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR TCA 90 bp | TTCTCAGCATCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCTCTACATAATCCTTaGTTTCCTTTCCTGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FSASLFVSKRKKTLVLRYPLHNP*FPFLSW Trigger: CCAAGACAGGAAAGGAAATCAAGGATTATGTAGAGG...ATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGATGCTGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CCA 90 bp | TTCTCAGCATCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATGGAAATCAGATCACGTaGGTTCTTCACTTCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FSASLFVSKRKKTLVLRYGNQIT*VLHFLL Trigger: AAGAAGGAAGTGAAGAACCCACGTGATCTGATTTCC...ATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGATGCTGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CCA 90 bp | TTCTCAGCATCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATTTTCCTTTCCTGTCTTaGAAATCAGATCACGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: FSASLFVSKRKKTLVLRYFPFLS*KSDHVG Trigger: ACCCACGTGATCTGATTTCCAAGACAGGAAAGGAAA...ATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGATGCTGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS GCA 90 bp | GGGATTCTTGTCTTCTGGGATGCCTTTGAGAAGAGGGTCTGTCCCTaGTTGGGCCTCTACATAATCCTTGATTTCCTTTCCTGTCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: GILVFWDAFEKRVCP*LGLYIILDFLSCLG Trigger: TCCAAGACAGGAAAGGAAATCAAGGATTATGTAGAGGCCCAAGCAGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAGACAAGAATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | TGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGGGCGTGAGGGTCTGTCCCTGCTaGGGCCTCTACATAATCCTT | + |
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Preference number: 5 (lower is better) Translates to: CLRGRKHWSLGIPVHLGVRVCPC*GLYIIL Trigger: AAGGATTATGTAGAGGCCCAAGCAGGGACAGACCCT...CACGCCCAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | TTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGGGCTCTTCTGGGATGCCTTaGAGAAGAGGGTCTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LCLRGRKHWSLGIPVHLGSSGMP*RRGSVP Trigger: AGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAGA...GCCCAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | TATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGTCTTCTGGGATGCCTTaGAGAAGAGGGTCTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YLCLRGRKHWSLGIPVHLSSGMP*RRGSVP Trigger: AGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAGA...CAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | CTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTCTTCTGGGATGCCTTaGAGAAGAGGGTCTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LYLCLRGRKHWSLGIPVHSSGMP*RRGSVP Trigger: AGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAGA...GTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | TTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTTCTTCTGGGATGCCTTaGAGAAGAGGGTCTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LFVSKRKKTLVLRYPSTLSSGMP*RRGSVP Trigger: AGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAGA...AAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | TCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACATCTTCTGGGATGCCTTaGAGAAGAGGGTCTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: SLFVSKRKKTLVLRYPSTSSGMP*RRGSVP Trigger: AGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAGA...TGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | TTCTCAGCATCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATTCTTCTGGGATGCCTTaGAGAAGAGGGTCTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: FSASLFVSKRKKTLVLRYSSGMP*RRGSVP Trigger: AGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAGA...ATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGATGCTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | TATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACACTTGATTTCCTTTCCTGTCTaGGAAATCAGATCACGTGGG | + |
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Preference number: 5 (lower is better) Translates to: YLCLRGRKHWSLGIPVHLISFPV*EIRSRG Trigger: CCCACGTGATCTGATTTCCAAGACAGGAAAGGAAAT...CAAGTGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | TCTCAGCATCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCATTTCCTTTCCTGTCTaGGAAATCAGATCACGTGGG | + |
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Preference number: 5 (lower is better) Translates to: SQHLYLCLRGRKHWSLGIISFPV*EIRSRG Trigger: CCCACGTGATCTGATTTCCAAGACAGGAAAGGAAAT...GATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGATGCTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | TCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATCCCAGTACAATTTCCTTTCCTGTCTaGGAAATCAGATCACGTGGG | + |
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Preference number: 5 (lower is better) Translates to: SLFVSKRKKTLVLRYPSTISFPV*EIRSRG Trigger: CCCACGTGATCTGATTTCCAAGACAGGAAAGGAAAT...TGTACTGGGATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS-3UTR CAA 90 bp | TTCTCAGCATCTTTATTTGTGTCTAAGAGGAAGAAAACATTGGTCCTTAGGTATATTTCCTTTCCTGTCTaGGAAATCAGATCACGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSASLFVSKRKKTLVLRYISFPV*EIRSRG Trigger: CCCACGTGATCTGATTTCCAAGACAGGAAAGGAAAT...ATACCTAAGGACCAATGTTTTCTTCCTCTTAGACACAAATAAAGATGCTGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS GCA 72 bp | GTCTTCTGGGATGCCTTTGAGAAGAGGGTCTGTCCCTaGTTGGGCCTCTACATAATCCTTGATTTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VFWDAFEKRVCP*LGLYIILDFLS Trigger: GGAAAGGAAATCAAGGATTATGTAGAGGCCCAAGCAGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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| CDS CAA 90 bp | ATTCTTGTCTTCTGGGATGCCTTTGAGAAGAGGGTCTGTCCCTGCTaGGGCCTCTACATAATCCTTGATTTCCTTTCCTGTCTTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: ILVFWDAFEKRVCPC*GLYIILDFLSCLGN Trigger: ATTTCCAAGACAGGAAAGGAAATCAAGGATTATGTAGAGGCCCAAGCAGGGACAGACCCTCTTCTCAAAGGCATCCCAGAAGACAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000036088.11 ENSMUST00000100532.10 ENSMUST00000107708.2 ENSMUST00000107709.8 ENSMUST00000107711.8 ENSMUST00000107712.8 ENSMUST00000107714.9 |
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