Pregenerated sensors for GNG4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021303Ensembl transcript IDs: ENSMUST00000021734.9
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCAAACAGGGAGAACGGGGCATTTGGATTGAGAAGATGGCCCAGTaGGGCTGTCTGGTGAGTATCTACAGTCAAGGCTGCTCCAGCGTC | + |
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Preference number: 1 (lower is better) Translates to: SKQGERGIWIEKMAQ*GCLVSIYSQGCSSV Trigger: GACGCTGGAGCAGCCTTGACTGTAGATACTCACCAGACAGCCCCACTGGGCCATCTTCTCAATCCAAATGCCCCGTTCTCCCTGTTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CCA 90 bp | GGTTGGCCTGCCAGGCCTGTGCTGTATGGAAATGGAACTGTAGCTTaGACTTGCCTGCTCTTAGTCCCTCAAGCCAGCAAGATTCACACC | + |
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Preference number: 1 (lower is better) Translates to: GWPARPVLYGNGTVA*TCLLLVPQASKIHT Trigger: GGTGTGAATCTTGCTGGCTTGAGGGACTAAGAGCAGGCAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR TCA 90 bp | AACGGGGCATTTGGATTGAGAAGATGGCCCAGTGGGGCTGTCTGGTaGGTATCTACAGTCAAGGCTGCTCCAGCGTCTACACCACAAATG | + |
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Preference number: 1 (lower is better) Translates to: NGAFGLRRWPSGAVW*VSTVKAAPASTPQM Trigger: CATTTGTGGTGTAGACGCTGGAGCAGCCTTGACTGTAGATACTCACCAGACAGCCCCACTGGGCCATCTTCTCAATCCAAATGCCCCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR GCA 90 bp | CCTGCCAGGCCTGTGCTGTATGGAAATGGAACTGTAGCTTGGACTTaGCTGCTCTTAGTCCCTCAAGCCAGCAAGATTCACACCAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: PARPVLYGNGTVAWT*LLLVPQASKIHTKL Trigger: CAGCTTGGTGTGAATCTTGCTGGCTTGAGGGACTAAGAGCAGGCAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CCA 90 bp | ACTGTGGTTACCGCCTCCATTGGGAGGGTATGGGGGTGCCTTAGATaGGGCCAACAGCCTTGTCATGGAAAATCTCAAGGCTTACTGCTA | + |
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Preference number: 1 (lower is better) Translates to: TVVTASIGRVWGCLR*GQQPCHGKSQGLLL Trigger: TAGCAGTAAGCCTTGAGATTTTCCATGACAAGGCTGTTGGCCCCATCTAAGGCACCCCCATACCCTCCCAATGGAGGCGGTAACCACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR GCA 90 bp | AAGATGGCCCAGTGGGGCTGTCTGGTGAGTATCTACAGTCAAGGCTaGTCCAGCGTCTACACCACAAATGTATTCTCAGAAGCATCAGCG | + |
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Preference number: 1 (lower is better) Translates to: KMAQWGCLVSIYSQG*SSVYTTNVFSEASA Trigger: CGCTGATGCTTCTGAGAATACATTTGTGGTGTAGACGCTGGAGCAGCCTTGACTGTAGATACTCACCAGACAGCCCCACTGGGCCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CCA 90 bp | ATTGGTTGGACAGAGATGGGGTGTTGTGGGAGGTGTGCCTCTACATaGGAGCATGCATGGTCTCTACTCAGAACTGTTACAGCAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: IGWTEMGCCGRCAST*EHAWSLLRTVTAGK Trigger: CTTTCCTGCTGTAACAGTTCTGAGTAGAGACCATGCATGCTCCCATGTAGAGGCACACCTCCCACAACACCCCATCTCTGTCCAACCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR GCA 90 bp | TCTGTGGCCCCTTTGAGAATAATAGCTACTGTCCCTCCTTTAATCTaGTTGGGTTGGCCTGCCAGGCCTGTGCTGTATGGAAATGGAACT | + |
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Preference number: 1 (lower is better) Translates to: SVAPLRIIATVPPLI*LGWPARPVLYGNGT Trigger: AGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAGCAGATTAAAGGAGGGACAGTAGCTATTATTCTCAAAGGGGCCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR GCA 90 bp | GAGAATAATAGCTACTGTCCCTCCTTTAATCTGCTTGGGTTGGCCTaGCAGGCCTGTGCTGTATGGAAATGGAACTGTAGCTTGGACTTG | + |
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Preference number: 1 (lower is better) Translates to: ENNSYCPSFNLLGLA*QACAVWKWNCSLDL Trigger: CAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAGCAGATTAAAGGAGGGACAGTAGCTATTATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CCA 90 bp | CCTTTGAGAATAATAGCTACTGTCCCTCCTTTAATCTGCTTGGGTTaGCCTGCCAGGCCTGTGCTGTATGGAAATGGAACTGTAGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: PLRIIATVPPLICLG*PARPVLYGNGTVAW Trigger: CCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAGCAGATTAAAGGAGGGACAGTAGCTATTATTCTCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR TCA 90 bp | CAGTGCTATGAAGGAAATATGATAAAACAAGATGAGCCCAGATCATaGTTGGTTGGACAGAGATGGGGTGTTGTGGGAGGTGTGCCTCTA | + |
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Preference number: 1 (lower is better) Translates to: QCYEGNMIKQDEPRS*LVGQRWGVVGGVPL Trigger: TAGAGGCACACCTCCCACAACACCCCATCTCTGTCCAACCAATCATGATCTGGGCTCATCTTGTTTTATCATATTTCCTTCATAGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR TCA 90 bp | ACTTCTCTTGGCCAAGGTGGGAGAGAGGTGTACATCCAGTTAGTGTaGAAATGTGTTTGCTTCATTCCAAGCGTGCAGTTAGGACTGTTT | + |
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Preference number: 1 (lower is better) Translates to: TSLGQGGREVYIQLV*KCVCFIPSVQLGLF Trigger: AAACAGTCCTAACTGCACGCTTGGAATGAAGCAAACACATTTTCACACTAACTGGATGTACACCTCTCTCCCACCTTGGCCAAGAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR TCA 90 bp | GGCACCTACATATCATCTATTACAAACTGCCATAACTTAGGCTTGTaGCACTTCTCTTGGCCAAGGTGGGAGAGAGGTGTACATCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: GTYISSITNCHNLGL*HFSWPRWERGVHPV Trigger: AACTGGATGTACACCTCTCTCCCACCTTGGCCAAGAGAAGTGTCACAAGCCTAAGTTATGGCAGTTTGTAATAGATGATATGTAGGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR TCA 90 bp | GGGCCAACAGCCTTGTCATGGAAAATCTCAAGGCTTACTGCTATCTaGTCTTGGGGCACCTACATATCATCTATTACAAACTGCCATAAC | + |
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Preference number: 1 (lower is better) Translates to: GPTALSWKISRLTAI*SWGTYISSITNCHN Trigger: GTTATGGCAGTTTGTAATAGATGATATGTAGGTGCCCCAAGATCAGATAGCAGTAAGCCTTGAGATTTTCCATGACAAGGCTGTTGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR GCA 90 bp | ATAGACTACCCACACATGGACGTCTTGGTGTGCTTACTTTCTATCTaGAGTTTTCAGCAAATGTCATTTCTCTATGCCTGGGATATTCCC | + |
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Preference number: 1 (lower is better) Translates to: IDYPHMDVLVCLLSI*SFQQMSFLYAWDIP Trigger: GGGAATATCCCAGGCATAGAGAAATGACATTTGCTGAAAACTGCAGATAGAAAGTAAGCACACCAAGACGTCCATGTGTGGGTAGTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR GCA 90 bp | GGGAGGGTTTTAGGGATAGACTACCCACACATGGACGTCTTGGTGTaGTTACTTTCTATCTGCAGTTTTCAGCAAATGTCATTTCTCTAT | + |
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Preference number: 1 (lower is better) Translates to: GRVLGIDYPHMDVLV*LLSICSFQQMSFLY Trigger: ATAGAGAAATGACATTTGCTGAAAACTGCAGATAGAAAGTAAGCACACCAAGACGTCCATGTGTGGGTAGTCTATCCCTAAAACCCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR GCA 90 bp | GTGCTTACTTTCTATCTGCAGTTTTCAGCAAATGTCATTTCTCTATaGCTGGGATATTCCCTCTCTAAAACTAGACCTATACTTGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: VLTFYLQFSANVISL*LGYSLSKTRPILGV Trigger: TACTCCAAGTATAGGTCTAGTTTTAGAGAGGGAATATCCCAGGCATAGAGAAATGACATTTGCTGAAAACTGCAGATAGAAAGTAAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CCA 90 bp | TTACTTTCTATCTGCAGTTTTCAGCAAATGTCATTTCTCTATGCCTaGGATATTCCCTCTCTAAAACTAGACCTATACTTGGAGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: LLSICSFQQMSFLYA*DIPSLKLDLYLEYL Trigger: TAAGTACTCCAAGTATAGGTCTAGTTTTAGAGAGGGAATATCCCAGGCATAGAGAAATGACATTTGCTGAAAACTGCAGATAGAAAGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CAA 90 bp | GGGTTGGCCTGCCAGGCCTGTGCTGTATGGAAATGGAACTGTAGCTaGGACTTGCCTGCTCTTAGTCCCTCAAGCCAGCAAGATTCACAC | + |
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Preference number: 2 (lower is better) Translates to: GLACQACAVWKWNCS*DLPALSPSSQQDSH Trigger: GTGTGAATCTTGCTGGCTTGAGGGACTAAGAGCAGGCAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CAA 90 bp | GCAAGAGGAGTAATTAACTGTCTGCAGTTTGCCGGTTTGAACAGCTaGGCACACAACGGCTTGCCCAGCAGCACACAGCAAGCCTCGTTG | + |
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Preference number: 2 (lower is better) Translates to: ARGVINCLQFAGLNS*AHNGLPSSTQQASL Trigger: CAACGAGGCTTGCTGTGTGCTGCTGGGCAAGCCGTTGTGTGCCAAGCTGTTCAAACCGGCAAACTGCAGACAGTTAATTACTCCTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CAA 90 bp | GCCTGCCAGGCCTGTGCTGTATGGAAATGGAACTGTAGCTTGGACTaGCCTGCTCTTAGTCCCTCAAGCCAGCAAGATTCACACCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ACQACAVWKWNCSLD*PALSPSSQQDSHQA Trigger: AGCTTGGTGTGAATCTTGCTGGCTTGAGGGACTAAGAGCAGGCAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCTCCTTTAATCTGCTTGGGTTGGCCTGCCAGGCCTGTGCTGTATGGAAAGGAGAACGGGGCATTTaGATTGAGAAGATGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: CPSFNLLGLACQACAVWKGERGI*IEKMAQ Trigger: CTGGGCCATCTTCTCAATCCAAATGCCCCGTTCTCC...TTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAGCAGATTAAAGGAGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CAA 90 bp | CTTCATTCCAAGCGTGCAGTTAGGACTGTTTGTGAAGCTGCACGCTaGCCACAGGTGTCCACAGTTCAGAGCTTCAGGGAGGGTTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: LHSKRAVRTVCEAAR*PQVSTVQSFREGFR Trigger: CCTAAAACCCTCCCTGAAGCTCTGAACTGTGGACACCTGTGGCAAGCGTGCAGCTTCACAAACAGTCCTAACTGCACGCTTGGAATGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCCTTAGATGGGGCCAACAGCCTTGTCATGGAAAATCTCAAGGCTTACTGTTTGGATTGAGAAGATaGCCCAGTGGGGCTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GCLRWGQQPCHGKSQGLLFGLRR*PSGAVW Trigger: CCAGACAGCCCCACTGGGCCATCTTCTCAATCCAAA...CAGTAAGCCTTGAGATTTTCCATGACAAGGCTGTTGGCCCCATCTAAGGCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CAA 90 bp | AGCTTGGCACACAACGGCTTGCCCAGCAGCACACAGCAAGCCTCGTaGAGATCCAGAGGAGGGGTAGTTCTCAAATATCTACACAACAAA | + |
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Preference number: 2 (lower is better) Translates to: SLAHNGLPSSTQQAS*RSRGGVVLKYLHNK Trigger: TTTGTTGTGTAGATATTTGAGAACTACCCCTCCTCTGGATCTCAACGAGGCTTGCTGTGTGCTGCTGGGCAAGCCGTTGTGTGCCAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTGCCAGGCCTGTGCTGTATGGAAATGGAACTGTAGCTTGGACTTGCCTGGAGCTGAGAATCCACTaGACAAATTACCCTCATCTG | + |
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Preference number: 2 (lower is better) Translates to: WPARPVLYGNGTVAWTCLELRIH*TNYPHL Trigger: CAGATGAGGGTAATTTGTGCAGTGGATTCTCAGCTC...CAGGCAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CAA 90 bp | GTGGCCCCTTTGAGAATAATAGCTACTGTCCCTCCTTTAATCTGCTaGGGTTGGCCTGCCAGGCCTGTGCTGTATGGAAATGGAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: VAPLRIIATVPPLIC*GWPARPVLYGNGTV Trigger: TACAGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAGCAGATTAAAGGAGGGACAGTAGCTATTATTCTCAAAGGGGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAAAATGATAGTCACCTCCTTGGAGGCCATTTTGCACTCCTCGTCTCAGAACGAGAAGATGGCCCAGTaGGGCTGTCTGGTGAGTATC | + |
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Preference number: 2 (lower is better) Translates to: LKMIVTSLEAILHSSSQNEKMAQ*GCLVSI Trigger: GATACTCACCAGACAGCCCCACTGGGCCATCTTCTC...GTTCTGAGACGAGGAGTGCAAAATGGCCTCCAAGGAGGTGACTATCATTTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CAA 90 bp | CCCTTTGAGAATAATAGCTACTGTCCCTCCTTTAATCTGCTTGGGTaGGCCTGCCAGGCCTGTGCTGTATGGAAATGGAACTGTAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PFENNSYCPSFNLLG*ACQACAVWKWNCSL Trigger: CAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAGCAGATTAAAGGAGGGACAGTAGCTATTATTCTCAAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR TCA 90 bp | GATATGTACACATTTCTGTTGAGTACACACTCTGGCAGAGTTGTCTCCTCACAAACGGGGCATTTGGATTaGGAAGATGGCCCAGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: DMYTFLLSTHSGRVVSSQTGHLD*EDGPVG Trigger: CCCCACTGGGCCATCTTCTCAATCCAAATGCCCCGT...TTGTGAGGAGACAACTCTGCCAGAGTGTGTACTCAACAGAAATGTGTACATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAAGAGAGGGTAGCAAGGCACAAACCCATCTAAAAATGATAGTCACCTCCTTCTCTTGGCCAAGGTaGGAGAGAGGTGTACATCCA | + |
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Preference number: 2 (lower is better) Translates to: AAREGSKAQTHLKMIVTSFSWPR*ERGVHP Trigger: TGGATGTACACCTCTCTCCCACCTTGGCCAAGAGAA...GGAGGTGACTATCATTTTTAGATGGGTTTGTGCCTTGCTACCCTCTCTTGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CAA 90 bp | GATGACCTACAGCTAGATCCAGAGACAGAACATTCCAGAAGCCTTTaGTGTCCCCTCTCTGTGGCCCCTTTGAGAATAATAGCTACTGTC | + |
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Preference number: 2 (lower is better) Translates to: DDLQLDPETEHSRSL*CPLSVAPLRIIATV Trigger: GACAGTAGCTATTATTCTCAAAGGGGCCACAGAGAGGGGACACAAAAGGCTTCTGGAATGTTCTGTCTCTGGATCTAGCTGTAGGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAAGAGAGGGTAGCAAGGCACAAACCCATCTAAAAATGATAGTCACCTCCATCAGCGAGTTGCATTaGTGGCATCACTTTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: AAREGSKAQTHLKMIVTSISELH*WHHFQG Trigger: TCCCTGAAAGTGATGCCACCAATGCAACTCGCTGAT...GGAGGTGACTATCATTTTTAGATGGGTTTGTGCCTTGCTACCCTCTCTTGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR GCA 90 bp | GATCAGCGAGTTGCATTGGTGGCATCACTTTCAGGGATAACTGTGCCGAGACTCTGTTGTCAGACTTCTTaGCTTACTAGAAACACCAAG | + |
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Preference number: 2 (lower is better) Translates to: DQRVALVASLSGITVPRLCCQTS*LTRNTK Trigger: CTTGGTGTTTCTAGTAAGGCAAGAAGTCTGACAACA...GAGTCTCGGCACAGTTATCCCTGAAAGTGATGCCACCAATGCAACTCGCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCTCCTTTAATCTGCTTGGGTTGGCCTGCCAGGCCTGTGCTGTATGGAAATCATTTCTCTATGCCTaGGATATTCCCTCTCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: CPSFNLLGLACQACAVWKSFLYA*DIPSLK Trigger: TTTTAGAGAGGGAATATCCCAGGCATAGAGAAATGA...TTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAGCAGATTAAAGGAGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR GCA 90 bp | CTAAAAATGATAGTCACCTCCTTGGAGGCCATTTTGCACTCCTCGTCTCAGAACAATCTCAAGGCTTACTaGTATCTGATCTTGGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LKMIVTSLEAILHSSSQNNLKAY*YLILGH Trigger: GTGCCCCAAGATCAGATAGCAGTAAGCCTTGAGATT...GTTCTGAGACGAGGAGTGCAAAATGGCCTCCAAGGAGGTGACTATCATTTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR GCA 90 bp | CTAAAAATGATAGTCACCTCCTTGGAGGCCATTTTGCACTCCTCGTCTCAGAACATGGACGTCTTGGTGTaGTTACTTTCTATCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LKMIVTSLEAILHSSSQNMDVLV*LLSICS Trigger: ACTGCAGATAGAAAGTAAGCACACCAAGACGTCCAT...GTTCTGAGACGAGGAGTGCAAAATGGCCTCCAAGGAGGTGACTATCATTTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTTCAGCAAATGTCATTTCTCTATGCCTGGGATATTCCCTCTCTAAAACTAGAGATGGGGTGTTGTaGGAGGTGTGCCTCTACATG | + |
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Preference number: 2 (lower is better) Translates to: QFSANVISLCLGYSLSKTRDGVL*EVCLYM Trigger: CATGTAGAGGCACACCTCCCACAACACCCCATCTCT...AGTTTTAGAGAGGGAATATCCCAGGCATAGAGAAATGACATTTGCTGAAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR CCA 90 bp | GATATGTACACATTTCTGTTGAGTACACACTCTGGCAGAGTTGTCTCCTCACAAACATGGGAGCATGCATaGTCTCTACTCAGAACTGTT | + |
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Preference number: 2 (lower is better) Translates to: DMYTFLLSTHSGRVVSSQTWEHA*SLLRTV Trigger: AACAGTTCTGAGTAGAGACCATGCATGCTCCCATGT...TTGTGAGGAGACAACTCTGCCAGAGTGTGTACTCAACAGAAATGTGTACATATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGCTGTGGACAGAGCTGAGAATCCACTGCACAAATTACCCTCATCTGTTTATGAGTTTACAAGGTTaGTCACAAGACTCTGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: TKLWTELRIHCTNYPHLFMSLQG*SQDSEN Trigger: ATTCTCAGAGTCTTGTGATCAACCTTGTAAACTCAT...AAACAGATGAGGGTAATTTGTGCAGTGGATTCTCAGCTCTGTCCACAGCTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAAGAGAGGGTAGCAAGGCACAAACCCATCTAAAAATGATAGTCACCTCCAGGAAGAGGAAACAGTaGTATGAAGGAAATATGATA | + |
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Preference number: 2 (lower is better) Translates to: AAREGSKAQTHLKMIVTSRKRKQ*YEGNMI Trigger: TATCATATTTCCTTCATAGCACTGTTTCCTCTTCCT...GGAGGTGACTATCATTTTTAGATGGGTTTGTGCCTTGCTACCCTCTCTTGCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGGTAGTTCTCAAATATCTACACAACAAATGTTCTCACAGAGCCCTCAGCAAAATGTCATTTCTCTATaGCTGGGATATTCCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: RGSSQISTQQMFSQSPQQNVISL*LGYSLS Trigger: AGAGAGGGAATATCCCAGGCATAGAGAAATGACATT...TTGCTGAGGGCTCTGTGAGAACATTTGTTGTGTAGATATTTGAGAACTACCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTTCAGCAAATGTCATTTCTCTATGCCTGGGATATTCCCTCTCTAAAACTTTGAATTACTGCGCATaGGAGACACTTGTGCATGGT | + |
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Preference number: 2 (lower is better) Translates to: QFSANVISLCLGYSLSKTLNYCA*ETLVHG Trigger: ACCATGCACAAGTGTCTCCCATGCGCAGTAATTCAA...AGTTTTAGAGAGGGAATATCCCAGGCATAGAGAAATGACATTTGCTGAAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CCA 72 bp | CACCAAGGAGGGAGCAAACAGGGAGAACGGGGCATTTaGATTGAGAAGATGGCCCAGTGGGGCTGTCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: HQGGSKQGERGI*IEKMAQWGCLV Trigger: CACCAGACAGCCCCACTGGGCCATCTTCTCAATCCAAATGCCCCGTTCTCCCTGTTTGCTCCCTCCTTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CCA 72 bp | ACCGCCTCCATTGGGAGGGTATGGGGGTGCCTTAGATaGGGCCAACAGCCTTGTCATGGAAAATCTCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: TASIGRVWGCLR*GQQPCHGKSQG Trigger: GCCTTGAGATTTTCCATGACAAGGCTGTTGGCCCCATCTAAGGCACCCCCATACCCTCCCAATGGAGGCGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR TCA 72 bp | AGGAGGGAGCAAACAGGGAGAACGGGGCATTTGGATTaGGAAGATGGCCCAGTGGGGCTGTCTGGTGAGTAT | + |
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Preference number: 3 (lower is better) Translates to: RREQTGRTGHLD*EDGPVGLSGEY Trigger: ATACTCACCAGACAGCCCCACTGGGCCATCTTCTCAATCCAAATGCCCCGTTCTCCCTGTTTGCTCCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR GCA 72 bp | ACTGTGGTTACCGCCTCCATTGGGAGGGTATGGGGGTaGCTTAGATGGGGCCAACAGCCTTGTCATGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TVVTASIGRVWG*LRWGQQPCHGK Trigger: TTTTCCATGACAAGGCTGTTGGCCCCATCTAAGGCACCCCCATACCCTCCCAATGGAGGCGGTAACCACAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CCA 72 bp | GGAGAACGGGGCATTTGGATTGAGAAGATGGCCCAGTaGGGCTGTCTGGTGAGTATCTACAGTCAAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GERGIWIEKMAQ*GCLVSIYSQGC Trigger: GCAGCCTTGACTGTAGATACTCACCAGACAGCCCCACTGGGCCATCTTCTCAATCCAAATGCCCCGTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CCA 72 bp | CTTGGGTTGGCCTGCCAGGCCTGTGCTGTATGGAAATaGAACTGTAGCTTGGACTTGCCTGCTCTTAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGLACQACAVWK*NCSLDLPALSP Trigger: GGGACTAAGAGCAGGCAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR GCA 72 bp | GATTGGTTGGACAGAGATGGGGTGTTGTGGGAGGTGTaGCTCTACATGGGAGCATGCATGGTCTCTACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DWLDRDGVLWEV*LYMGACMVSTQ Trigger: CTGAGTAGAGACCATGCATGCTCCCATGTAGAGGCACACCTCCCACAACACCCCATCTCTGTCCAACCAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CCA 72 bp | CCAGATCATGATTGGTTGGACAGAGATGGGGTGTTGTaGGAGGTGTGCCTCTACATGGGAGCATGCATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: PDHDWLDRDGVL*EVCLYMGACMV Trigger: GACCATGCATGCTCCCATGTAGAGGCACACCTCCCACAACACCCCATCTCTGTCCAACCAATCATGATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
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| 3UTR CCA 72 bp | GCCAGGCCTGTGCTGTATGGAAATGGAACTGTAGCTTaGACTTGCCTGCTCTTAGTCCCTCAAGCCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ARPVLYGNGTVA*TCLLLVPQASK Trigger: CTTGCTGGCTTGAGGGACTAAGAGCAGGCAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR TCA 72 bp | TTTGGATTGAGAAGATGGCCCAGTGGGGCTGTCTGGTaGGTATCTACAGTCAAGGCTGCTCCAGCGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: FGLRRWPSGAVW*VSTVKAAPAST Trigger: TGTAGACGCTGGAGCAGCCTTGACTGTAGATACTCACCAGACAGCCCCACTGGGCCATCTTCTCAATCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR GCA 72 bp | CCGAGACTCCAGAGGACCCAGTGTTGTCAGACTTCTTaGCTTACTAGAAACACCAAGGAGGGAGCAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: PRLQRTQCCQTS*LTRNTKEGANR Trigger: CCTGTTTGCTCCCTCCTTGGTGTTTCTAGTAAGGCAAGAAGTCTGACAACACTGGGTCCTCTGGAGTCTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR GCA 72 bp | AGCTACTGTCCCTCCTTTAATCTGCTTGGGTTGGCCTaGCAGGCCTGTGCTGTATGGAAATGGAACTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SYCPSFNLLGLA*QACAVWKWNCS Trigger: GCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAGCAGATTAAAGGAGGGACAGTAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGCCTTAGATGGGGCCAACAGCCTTGTCATGGAAAATCTCAAGGCTTACTGCCAGAGGACCCAGTGTaGTCAGACTTCTTGCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: GCLRWGQQPCHGKSQGLLPEDPV*SDFLPY Trigger: GTAAGGCAAGAAGTCTGACAACACTGGGTCCTCTGG...CAGTAAGCCTTGAGATTTTCCATGACAAGGCTGTTGGCCCCATCTAAGGCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CCA 72 bp | ACAGAGATGGGGTGTTGTGGGAGGTGTGCCTCTACATaGGAGCATGCATGGTCTCTACTCAGAACTGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: TEMGCCGRCAST*EHAWSLLRTVT Trigger: TGTAACAGTTCTGAGTAGAGACCATGCATGCTCCCATGTAGAGGCACACCTCCCACAACACCCCATCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGGCACAAACCCATCTAAAAATGATAGTCACCTCCTTGGAGGCCATTTTGGACAGAGATGGGGTGTaGTGGGAGGTGTGCCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SKAQTHLKMIVTSLEAILDRDGV*WEVCLY Trigger: GTAGAGGCACACCTCCCACAACACCCCATCTCTGTC...CAAAATGGCCTCCAAGGAGGTGACTATCATTTTTAGATGGGTTTGTGCCTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR GCA 72 bp | CCTGTGCTGTATGGAAATGGAACTGTAGCTTGGACTTaGCTGCTCTTAGTCCCTCAAGCCAGCAAGATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PVLYGNGTVAWT*LLLVPQASKIH Trigger: GTGAATCTTGCTGGCTTGAGGGACTAAGAGCAGGCAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CCA 72 bp | ATAATAGCTACTGTCCCTCCTTTAATCTGCTTGGGTTaGCCTGCCAGGCCTGTGCTGTATGGAAATGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: IIATVPPLICLG*PARPVLYGNGT Trigger: AGTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAGCAGATTAAAGGAGGGACAGTAGCTATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGGCACAAACCCATCTAAAAATGATAGTCACCTCCTTGGAGGCCATTTTGGATCAGCGAGTTGCATaGGTGGCATCACTTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SKAQTHLKMIVTSLEAILDQRVA*VASLSG Trigger: CCCTGAAAGTGATGCCACCAATGCAACTCGCTGATC...CAAAATGGCCTCCAAGGAGGTGACTATCATTTTTAGATGGGTTTGTGCCTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGGCACAAACCCATCTAAAAATGATAGTCACCTCCTTGGAGGCCATTTTGAGGATAATGCGAGCTTaGCTTGGTTTCCTGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SKAQTHLKMIVTSLEAILRIMRA*LGFLPW Trigger: CCAGGGCAGGAAACCAAGCAAAGCTCGCATTATCCT...CAAAATGGCCTCCAAGGAGGTGACTATCATTTTTAGATGGGTTTGTGCCTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR TCA 72 bp | GGCCAAGGTGGGAGAGAGGTGTACATCCAGTTAGTGTaGAAATGTGTTTGCTTCATTCCAAGCGTGCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GQGGREVYIQLV*KCVCFIPSVQL Trigger: TAACTGCACGCTTGGAATGAAGCAAACACATTTTCACACTAACTGGATGTACACCTCTCTCCCACCTTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CCA 72 bp | TCCACTGCACAAATTACCCTCATCTGTTTATTCCTTTaGCATGGGTGTAAGGGGCTCCTTCTGGCTATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: STAQITLICLFL*HGCKGLLLAMV Trigger: AACCATAGCCAGAAGGAGCCCCTTACACCCATGCCAAAGGAATAAACAGATGAGGGTAATTTGTGCAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CCA 72 bp | TCTCCACAGCATTATAGGCTGTCATCCAGCACATGTTaGCTTTCAAGGATAATGCGAGCTTTGCTTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SPQHYRLSSSTC*LSRIMRALLGF Trigger: GAAACCAAGCAAAGCTCGCATTATCCTTGAAAGCCAACATGTGCTGGATGACAGCCTATAATGCTGTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR TCA 72 bp | GAAGGAAATATGATAAAACAAGATGAGCCCAGATCATaGTTGGTTGGACAGAGATGGGGTGTTGTGGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: EGNMIKQDEPRS*LVGQRWGVVGG Trigger: ACCTCCCACAACACCCCATCTCTGTCCAACCAATCATGATCTGGGCTCATCTTGTTTTATCATATTTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR TCA 72 bp | CAGTTGGAGAACTTGCACAAACTAAACACATCAGGATaGCCTACAGCTAGATCCAGAGACAGAACATTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QLENLHKLNTSG*PTARSRDRTFQ Trigger: CTGGAATGTTCTGTCTCTGGATCTAGCTGTAGGTCATCCTGATGTGTTTAGTTTGTGCAAGTTCTCCAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR GCA 72 bp | CCACACATGGACGTCTTGGTGTGCTTACTTTCTATCTaGAGTTTTCAGCAAATGTCATTTCTCTATGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PHMDVLVCLLSI*SFQQMSFLYAW Trigger: CCAGGCATAGAGAAATGACATTTGCTGAAAACTGCAGATAGAAAGTAAGCACACCAAGACGTCCATGTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR GCA 72 bp | GCCAACAGCCTTGTCATGGAAAATCTCAAGGCTTACTaGTATCTGATCTTGGGGCACCTACATATCATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ANSLVMENLKAY*YLILGHLHIIY Trigger: ATAGATGATATGTAGGTGCCCCAAGATCAGATAGCAGTAAGCCTTGAGATTTTCCATGACAAGGCTGTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR GCA 72 bp | ATTCACACCAAGCTGTGGACAGAGCTGAGAATCCACTaGACAAATTACCCTCATCTGTTTATTCCTTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IHTKLWTELRIH*TNYPHLFIPLA Trigger: TGCCAAAGGAATAAACAGATGAGGGTAATTTGTGCAGTGGATTCTCAGCTCTGTCCACAGCTTGGTGTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR TCA 72 bp | ATATCATCTATTACAAACTGCCATAACTTAGGCTTGTaGCACTTCTCTTGGCCAAGGTGGGAGAGAGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ISSITNCHNLGL*HFSWPRWERGV Trigger: TACACCTCTCTCCCACCTTGGCCAAGAGAAGTGTCACAAGCCTAAGTTATGGCAGTTTGTAATAGATGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR-3UTR CAA 90 bp | GATATGTACACATTTCTGTTGAGTACACACTCTGGCAGAGTTGTCTCCTCACAAAGTGTGAAAATGTGTTaGCTTCATTCCAAGCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DMYTFLLSTHSGRVVSSQSVKMC*LHSKRA Trigger: TGCACGCTTGGAATGAAGCAAACACATTTTCACACT...TTGTGAGGAGACAACTCTGCCAGAGTGTGTACTCAACAGAAATGTGTACATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAGCTGTGGACAGAGCTGAGAATCCACTGCACAAATTACCCTCATCTGTTTCCAAATGAGGAGACTTaGTGGAATAATGAGTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: TKLWTELRIHCTNYPHLFPNEET*WNNEFT Trigger: TGTAAACTCATTATTCCACAAAGTCTCCTCATTTGG...AAACAGATGAGGGTAATTTGTGCAGTGGATTCTCAGCTCTGTCCACAGCTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CCA 72 bp | ATCTGCAGTTTTCAGCAAATGTCATTTCTCTATGCCTaGGATATTCCCTCTCTAAAACTAGACCTATACTTG | + |
|
Preference number: 3 (lower is better) Translates to: ICSFQQMSFLYA*DIPSLKLDLYL Trigger: CAAGTATAGGTCTAGTTTTAGAGAGGGAATATCCCAGGCATAGAGAAATGACATTTGCTGAAAACTGCAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR GCA 72 bp | TTCTATCTGCAGTTTTCAGCAAATGTCATTTCTCTATaGCTGGGATATTCCCTCTCTAAAACTAGACCTATA | + |
|
Preference number: 3 (lower is better) Translates to: FYLQFSANVISL*LGYSLSKTRPI Trigger: TATAGGTCTAGTTTTAGAGAGGGAATATCCCAGGCATAGAGAAATGACATTTGCTGAAAACTGCAGATAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| CDS-3UTR GCA 90 bp | CCGCCTCCATTGGGAGGGTATGGGGGTGCCTTAGATGGGGCCAACAGCCTTGTCGCTTCCATCTTCAGCTaGTCCACGGCTTTCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPLGGYGGALDGANSLVASIFS*STAFLA Trigger: GGCCAGGAAAGCCGTGGAGCAGCTGAAGATGGAAGC...GACAAGGCTGTTGGCCCCATCTAAGGCACCCCCATACCCTCCCAATGGAGGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| CDS-3UTR CCA 90 bp | AAGATGGCCCAGTGGGGCTGTCTGGTGAGTATCTACAGTCAAGGCTGCTCCAGCAGGTCTGAGGCAGCCTaGGAGACCTTCACCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMAQWGCLVSIYSQGCSSRSEAA*ETFTLS Trigger: GGACAGGGTGAAGGTCTCCCAGGCTGCCTCAGACCT...GCTGGAGCAGCCTTGACTGTAGATACTCACCAGACAGCCCCACTGGGCCATCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGCCTTAGATGGGGCCAACAGCCTTGTCATGGAAAATCTCAAGGCTTACTGGCTCCACGGCTTTCCTaGCCTGGGAGATGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GCLRWGQQPCHGKSQGLLAPRLS*PGRCWW Trigger: CCACCAGCATCTCCCAGGCCAGGAAAGCCGTGGAGC...CAGTAAGCCTTGAGATTTTCCATGACAAGGCTGTTGGCCCCATCTAAGGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | CAGTTTGCCGGTTTGAACAGCTTGGCACACAACGGCTaGCCCAGCAGCACACAGCAAGCCTCGTTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: QFAGLNSLAHNG*PSSTQQASLRS Trigger: GGATCTCAACGAGGCTTGCTGTGTGCTGCTGGGCAAGCCGTTGTGTGCCAAGCTGTTCAAACCGGCAAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | AGCCCAGATCATGATTGGTTGGACAGAGATGGGGTGTaGTGGGAGGTGTGCCTCTACATGGGAGCATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SPDHDWLDRDGV*WEVCLYMGACM Trigger: CATGCATGCTCCCATGTAGAGGCACACCTCCCACAACACCCCATCTCTGTCCAACCAATCATGATCTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | AAGCGTGCAGTTAGGACTGTTTGTGAAGCTGCACGCTaGCCACAGGTGTCCACAGTTCAGAGCTTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRAVRTVCEAAR*PQVSTVQSFRE Trigger: CTCCCTGAAGCTCTGAACTGTGGACACCTGTGGCAAGCGTGCAGCTTCACAAACAGTCCTAACTGCACGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | CACAACGGCTTGCCCAGCAGCACACAGCAAGCCTCGTaGAGATCCAGAGGAGGGGTAGTTCTCAAATATCTA | + |
|
Preference number: 4 (lower is better) Translates to: HNGLPSSTQQAS*RSRGGVVLKYL Trigger: TAGATATTTGAGAACTACCCCTCCTCTGGATCTCAACGAGGCTTGCTGTGTGCTGCTGGGCAAGCCGTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | GCAAGAGGAGTAATTAACTGTCTGCAGTTTGCCGGTTaGAACAGCTTGGCACACAACGGCTTGCCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARGVINCLQFAG*NSLAHNGLPSS Trigger: GCTGCTGGGCAAGCCGTTGTGTGCCAAGCTGTTCAAACCGGCAAACTGCAGACAGTTAATTACTCCTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | TGCCAGGCCTGTGCTGTATGGAAATGGAACTGTAGCTaGGACTTGCCTGCTCTTAGTCCCTCAAGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CQACAVWKWNCS*DLPALSPSSQQ Trigger: TTGCTGGCTTGAGGGACTAAGAGCAGGCAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | TCCAGCACATGTTGGCTTTCAAGGATAATGCGAGCTTaGCTTGGTTTCCTGCCCTGGCAGAAAAGCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTCWLSRIMRA*LGFLPWQKSKR Trigger: CCTCTTGCTTTTCTGCCAGGGCAGGAAACCAAGCAAAGCTCGCATTATCCTTGAAAGCCAACATGTGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | GTTGACGCCCATAAATCCTTAGATCAGCGAGTTGCATaGGTGGCATCACTTTCAGGGATAACTGTGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VDAHKSLDQRVA*VASLSGITVPR Trigger: TCTCGGCACAGTTATCCCTGAAAGTGATGCCACCAATGCAACTCGCTGATCTAAGGATTTATGGGCGTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | AATAATAGCTACTGTCCCTCCTTTAATCTGCTTGGGTaGGCCTGCCAGGCCTGTGCTGTATGGAAATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NNSYCPSFNLLG*ACQACAVWKWN Trigger: GTTCCATTTCCATACAGCACAGGCCTGGCAGGCCAACCCAAGCAGATTAAAGGAGGGACAGTAGCTATTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | CATCTAAAAATGATAGTCACCTCCTTGGAGGCCATTTaGCACTCCTCGTCTCAGAACCATGGTGTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLKMIVTSLEAI*HSSSQNHGVCE Trigger: TTCACAGACACCATGGTTCTGAGACGAGGAGTGCAAAATGGCCTCCAAGGAGGTGACTATCATTTTTAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | AAGGCACAAACCCATCTAAAAATGATAGTCACCTCCTaGGAGGCCATTTTGCACTCCTCGTCTCAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAQTHLKMIVTS*EAILHSSSQNH Trigger: ATGGTTCTGAGACGAGGAGTGCAAAATGGCCTCCAAGGAGGTGACTATCATTTTTAGATGGGTTTGTGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | GAGAGAGGTGTACATCCAGTTAGTGTGAAAATGTGTTaGCTTCATTCCAAGCGTGCAGTTAGGACTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERGVHPVSVKMC*LHSKRAVRTVC Trigger: ACAAACAGTCCTAACTGCACGCTTGGAATGAAGCAAACACATTTTCACACTAACTGGATGTACACCTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||
| 3UTR CAA 72 bp | CTCCTCACAAAATATTCACATCCAAATGAGGAGACTTaGTGGAATAATGAGTTTACAAGGTTGATCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTKYSHPNEET*WNNEFTRLITR Trigger: TCTTGTGATCAACCTTGTAAACTCATTATTCCACAAAGTCTCCTCATTTGGATGTGAATATTTTGTGAGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021734.9 |
||