RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNG3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071658

Ensembl transcript IDs: ENSMUST00000096259.6

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTGCCTCCATGCGGGTACGAACAGGCAGCCGCCATCTTGGGCATTaGCTGCCGCGCCGAGTCGCCCTGTCCCGCCCCACGGCCTCTCGG +
Preference number: 1 (lower is better)
Translates to: RASMRVRTGSRHLGH*LPRRVALSRPTASR
Trigger: CCGAGAGGCCGTGGGGCGGGACAGGGCGACTCGGCGCGGCAGCCAATGCCCAAGATGGCGGCTGCCTGTTCGTACCCGCATGGAGGCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CCA 90 bp AAAGGGAACCTCTACTCAGGCGAGATTCTTATGCAAAACTCACTCTaGGCTTCTTGGGTCCCAGTCCTAGTGACTGGTTGTTTTAAGTCA +
Preference number: 1 (lower is better)
Translates to: KGNLYSGEILMQNSL*ASWVPVLVTGCFKS
Trigger: TGACTTAAAACAACCAGTCACTAGGACTGGGACCCAAGAAGCCCAGAGTGAGTTTTGCATAAGAATCTCGCCTGAGTAGAGGTTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR GCA 90 bp CAAATTTATTACTTATTTAGATCCCACAGAGACCAAGGAACAGGGTaGTCCAAGATGGCCTGTTTAACACATTTGTGTTATTACATACAC +
Preference number: 1 (lower is better)
Translates to: QIYYLFRSHRDQGTG*SKMACLTHLCYYIH
Trigger: GTGTATGTAATAACACAAATGTGTTAAACAGGCCATCTTGGAGCACCCTGTTCCTTGGTCTCTGTGGGATCTAAATAAGTAATAAATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CAA 90 bp GCGTGCCTCCATGCGGGTACGAACAGGCAGCCGCCATCTTGGGCATaGGCTGCCGCGCCGAGTCGCCCTGTCCCGCCCCACGGCCTCTCG +
Preference number: 2 (lower is better)
Translates to: ACLHAGTNRQPPSWA*AAAPSRPVPPHGLS
Trigger: CGAGAGGCCGTGGGGCGGGACAGGGCGACTCGGCGCGGCAGCCAATGCCCAAGATGGCGGCTGCCTGTTCGTACCCGCATGGAGGCACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR-3UTR TCA 90 bp TGCCTCCATGCGGGTACGAACAGGCAGCCGCCATCTTGGGCATTGGCTGCCGCGTGCTTGGAGTTAGCCTaGAAGGGTGAGGAGATGGGG +
Preference number: 2 (lower is better)
Translates to: CLHAGTNRQPPSWALAAACLELA*KGEEMG
Trigger: CCCCATCTCCTCACCCTTTCAGGCTAACTCCAAGCA...CGCGGCAGCCAATGCCCAAGATGGCGGCTGCCTGTTCGTACCCGCATGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR-3UTR TCA 90 bp TGCCTCCATGCGGGTACGAACAGGCAGCCGCCATCTTGGGCATTGGCTGCCGCGGTTAGCCTGAAAGGGTaGGGAGATGGGGTAGACATG +
Preference number: 2 (lower is better)
Translates to: CLHAGTNRQPPSWALAAAVSLKG*GDGVDM
Trigger: CATGTCTACCCCATCTCCTCACCCTTTCAGGCTAAC...CGCGGCAGCCAATGCCCAAGATGGCGGCTGCCTGTTCGTACCCGCATGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR-3UTR TCA 90 bp GAGAGGGCAGGGGCAGCCATTTTAAGACCAGAGGATCGCATAAGGGATCGTTCCTGTCCTCTGAGGCTCTaGATGACTTTATTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: ERAGAAILRPEDRIRDRSCPLRL*MTLFFK
Trigger: TTTGAAGAATAAAGTCATTCAGAGCCTCAGAGGACA...GGAACGATCCCTTATGCGATCCTCTGGTCTTAAAATGGCTGCCCCTGCCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CAA 90 bp CCAGTCCTAGTGACTGGTTGTTTTAAGTCAGGATTTCATTGTGTATaGTGTGTCGTCGTGGCTGGCTTGGAACTCAGAGATCCATCTGCC +
Preference number: 2 (lower is better)
Translates to: PVLVTGCFKSGFHCV*CVVVAGLELRDPSA
Trigger: GGCAGATGGATCTCTGAGTTCCAAGCCAGCCACGACGACACACAATACACAATGAAATCCTGACTTAAAACAACCAGTCACTAGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR-3UTR GCA 90 bp GAAAACAAATTTATTACTTATTTAGATCCCACAGAGACCAAGGAACAGGGTGCTGGGCACCTTATACTTTaGGATCTCCAATCCTTACAA +
Preference number: 2 (lower is better)
Translates to: ENKFITYLDPTETKEQGAGHLIL*DLQSLQ
Trigger: TTGTAAGGATTGGAGATCGCAAAGTATAAGGTGCCC...AGCACCCTGTTCCTTGGTCTCTGTGGGATCTAAATAAGTAATAAATTTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR GCA 72 bp GGGTACGAACAGGCAGCCGCCATCTTGGGCATTGGCTaGCGCGCCGAGTCGCCCTGTCCCGCCCCACGGCCT +
Preference number: 3 (lower is better)
Translates to: GYEQAAAILGIG*RAESPCPAPRP
Trigger: AGGCCGTGGGGCGGGACAGGGCGACTCGGCGCGGCAGCCAATGCCCAAGATGGCGGCTGCCTGTTCGTACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR TCA 72 bp CCAGGTGAGCACCCGGGCATCCCCCTCTCCATTGCCTaGACGGATGGATCACCGAGGGAAACAGGCAGGATT +
Preference number: 3 (lower is better)
Translates to: PGEHPGIPLSIA*TDGSPRETGRI
Trigger: AATCCTGCCTGTTTCCCTCGGTGATCCATCCGTTCAGGCAATGGAGAGGGGGATGCCCGGGTGCTCACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR GCA 72 bp ACCTCAAAGGGAACCTCTACTCAGGCGAGATTCTTATaGAAAACTCACTCTGGGCTTCTTGGGTCCCAGTCC +
Preference number: 3 (lower is better)
Translates to: TSKGTSTQARFL*KTHSGLLGSQS
Trigger: GGACTGGGACCCAAGAAGCCCAGAGTGAGTTTTGCATAAGAATCTCGCCTGAGTAGAGGTTCCCTTTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR-3UTR CAA 90 bp GTTTTAAGTCAGGATTTCATTGTGTATTGTGTGTCGTCGTGGCTGGCTTGGAACAACCTGACTCTGACTTaGAGAGGGCAGGGGCAGCCA +
Preference number: 3 (lower is better)
Translates to: VLSQDFIVYCVSSWLAWNNLTLT*RGQGQP
Trigger: TGGCTGCCCCTGCCCTCTCAAAGTCAGAGTCAGGTT...GTTCCAAGCCAGCCACGACGACACACAATACACAATGAAATCCTGACTTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CCA 72 bp CGATCTCCAATCCTTACAATGTCTAACGGGCTCGACTaGCCCTGTTCCCTGGATATGGCAAGTGTATCGATT +
Preference number: 3 (lower is better)
Translates to: RSPILTMSNGLD*PCSLDMASVSI
Trigger: AATCGATACACTTGCCATATCCAGGGAACAGGGCCAGTCGAGCCCGTTAGACATTGTAAGGATTGGAGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CCA 72 bp GATTTCATTGTGTATTGTGTGTCGTCGTGGCTGGCTTaGAACTCAGAGATCCATCTGCCTCTGTGTGTGTCC +
Preference number: 3 (lower is better)
Translates to: DFIVYCVSSWLA*NSEIHLPLCVS
Trigger: GGACACACACAGAGGCAGATGGATCTCTGAGTTCCAAGCCAGCCACGACGACACACAATACACAATGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CCA 72 bp GTCAGGATTTCATTGTGTATTGTGTGTCGTCGTGGCTaGCTTGGAACTCAGAGATCCATCTGCCTCTGTGTG +
Preference number: 3 (lower is better)
Translates to: VRISLCIVCRRG*LGTQRSICLCV
Trigger: CACACAGAGGCAGATGGATCTCTGAGTTCCAAGCCAGCCACGACGACACACAATACACAATGAAATCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CCA 72 bp CTCTACTCAGGCGAGATTCTTATGCAAAACTCACTCTaGGCTTCTTGGGTCCCAGTCCTAGTGACTGGTTGT +
Preference number: 3 (lower is better)
Translates to: LYSGEILMQNSL*ASWVPVLVTGC
Trigger: ACAACCAGTCACTAGGACTGGGACCCAAGAAGCCCAGAGTGAGTTTTGCATAAGAATCTCGCCTGAGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CAA 72 bp TTAAGACCAGAGGATCGCATAAGGGATCGTTCCCTATaGGGAACGCTGGGGACCGCCATTTTAAGAGCACCC +
Preference number: 4 (lower is better)
Translates to: LRPEDRIRDRSL*GTLGTAILRAP
Trigger: GGGTGCTCTTAAAATGGCGGTCCCCAGCGTTCCCAATAGGGAACGATCCCTTATGCGATCCTCTGGTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CAA 72 bp CATCTGCCTCTGTGTGTGTCCAACACCTCCGGAGTGTaGGTCACCACACTGAACTTAAGAACCCATGACTGC +
Preference number: 4 (lower is better)
Translates to: HLPLCVSNTSGV*VTTLNLRTHDC
Trigger: GCAGTCATGGGTTCTTAAGTTCAGTGTGGTGACCAACACTCCGGAGGTGTTGGACACACACAGAGGCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
CDS-3UTR GCA 90 bp GGATGGATCACCGAGGGAAACAGGCAGGATTTTGGCAGTTTAGCGGGGTCCCTTGCTGTTCCACCATCTTaGGTGCTTGACCAATACTCA +
Preference number: 4 (lower is better)
Translates to: GWITEGNRQDFGSLAGSLAVPPS*VLDQYS
Trigger: TGAGTATTGGTCAAGCACGCAAGATGGTGGAACAGC...AAGGGACCCCGCTAAACTGCCAAAATCCTGCCTGTTTCCCTCGGTGATCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
CDS-3UTR GCA 90 bp CCTCTCCATTGCCTGAACGGATGGATCACCGAGGGAAACAGGCAGGATTTTGGCTGTCATCAGGTCTGCTaGTGCCTTGGACACCTTTAT +
Preference number: 4 (lower is better)
Translates to: PLHCLNGWITEGNRQDFGCHQVC*CLGHLY
Trigger: ATAAAGGTGTCCAAGGCAGCAGCAGACCTGATGACA...GCCAAAATCCTGCCTGTTTCCCTCGGTGATCCATCCGTTCAGGCAATGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
CDS-3UTR CCA 90 bp ATTGTGTATTGTGTGTCGTCGTGGCTGGCTTGGAACTCAGAGATCCATCTGCCTGGTCTGCTGCTGCCTTaGACACCTTTATCCGGCACA +
Preference number: 4 (lower is better)
Translates to: IVYCVSSWLAWNSEIHLPGLLLP*TPLSGT
Trigger: TGTGCCGGATAAAGGTGTCCAAGGCAGCAGCAGACC...AGGCAGATGGATCTCTGAGTTCCAAGCCAGCCACGACGACACACAATACACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
CDS-3UTR GCA 90 bp ATTGTGTATTGTGTGTCGTCGTGGCTGGCTTGGAACTCAGAGATCCATCTGCCTGTATGTCATCAGGTCTaGTGCTGCCTTGGACACCTT +
Preference number: 4 (lower is better)
Translates to: IVYCVSSWLAWNSEIHLPVCHQV*CCLGHL
Trigger: AAGGTGTCCAAGGCAGCAGCAGACCTGATGACATAC...AGGCAGATGGATCTCTGAGTTCCAAGCCAGCCACGACGACACACAATACACAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CAA 72 bp GGATTTCATTGTGTATTGTGTGTCGTCGTGGCTGGCTaGGAACTCAGAGATCCATCTGCCTCTGTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GFHCVLCVVVAG*ELRDPSASVCV
Trigger: GACACACACAGAGGCAGATGGATCTCTGAGTTCCAAGCCAGCCACGACGACACACAATACACAATGAAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
CDS-3UTR GCA 90 bp GTGTCCAACACCTCCGGAGTGTTGGTCACCACACTGAACTTAAGAACCCATGACTTCCACCATCTTGCGTaGTTGACCAATACTCATAGT +
Preference number: 4 (lower is better)
Translates to: VSNTSGVLVTTLNLRTHDFHHLA*LTNTHS
Trigger: ACTATGAGTATTGGTCAAGCACGCAAGATGGTGGAA...GTCATGGGTTCTTAAGTTCAGTGTGGTGACCAACACTCCGGAGGTGTTGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
CDS-3UTR GCA 90 bp GTTTTAAGTCAGGATTTCATTGTGTATTGTGTGTCGTCGTGGCTGGCTTGGAACCATCAGGTCTGCTGCTaGCTTGGACACCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: VLSQDFIVYCVSSWLAWNHQVCC*LGHLYP
Trigger: CGGATAAAGGTGTCCAAGGCAGCAGCAGACCTGATG...GTTCCAAGCCAGCCACGACGACACACAATACACAATGAAATCCTGACTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CAA 72 bp GTGACTGGTTGTTTTAAGTCAGGATTTCATTGTGTATaGTGTGTCGTCGTGGCTGGCTTGGAACTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VTGCFKSGFHCV*CVVVAGLELRD
Trigger: ATCTCTGAGTTCCAAGCCAGCCACGACGACACACAATACACAATGAAATCCTGACTTAAAACAACCAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
3UTR CAA 72 bp GGAACAGGGTGCTCCAAGATGGCCTGTTTAACACATTaGTGTTATTACATACACCTCAAAGGGAACCTCTAC +
Preference number: 4 (lower is better)
Translates to: GTGCSKMACLTH*CYYIHLKGNLY
Trigger: GTAGAGGTTCCCTTTGAGGTGTATGTAATAACACAAATGTGTTAAACAGGCCATCTTGGAGCACCCTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
CDS-3UTR TCA 90 bp ACGTTGTCCTCTGAGGCTCTGAATGACTTTATTCTTCAAATGCCTTTACCTTTCACCATCTTGCGTGCTTaGCCAATACTCATAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TLSSEALNDFILQMPLPFTILRA*PILIVL
Trigger: CAGCACTATGAGTATTGGTCAAGCACGCAAGATGGT...GAAAGGTAAAGGCATTTGAAGAATAAAGTCATTCAGAGCCTCAGAGGACAACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
CDS-3UTR CAA 90 bp GAGAGGGCAGGGGCAGCCATTTTAAGACCAGAGGATCGCATAAGGGATCGTTCCCACCATCTTGCGTGCTaGACCAATACTCATAGTGCT +
Preference number: 5 (lower is better)
Translates to: ERAGAAILRPEDRIRDRSHHLAC*TNTHSA
Trigger: AGCACTATGAGTATTGGTCAAGCACGCAAGATGGTG...GGAACGATCCCTTATGCGATCCTCTGGTCTTAAAATGGCTGCCCCTGCCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
CDS-3UTR CAA 90 bp GAAAACAAATTTATTACTTATTTAGATCCCACAGAGACCAAGGAACAGGGTGCTAGGTCTGCTGCTGCCTaGGACACCTTTATCCGGCAC +
Preference number: 5 (lower is better)
Translates to: ENKFITYLDPTETKEQGARSAAA*DTFIRH
Trigger: GTGCCGGATAAAGGTGTCCAAGGCAGCAGCAGACCT...AGCACCCTGTTCCTTGGTCTCTGTGGGATCTAAATAAGTAATAAATTTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6
CDS CCA 72 bp GTGGGCACAGGAGTGATGAGGGGGTCCTCACAAGCGTaGGCATCACAGTATGTCATCAGGTCTGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: VGTGVMRGSSQA*ASQYVIRSAAA
Trigger: GGCAGCAGCAGACCTGATGACATACTGTGATGCCCACGCTTGTGAGGACCCCCTCATCACTCCTGTGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096259.6