Pregenerated sensors for GNG12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036402Ensembl transcript IDs: ENSMUST00000043148.13, ENSMUST00000114222.4, ENSMUST00000114224.8, ENSMUST00000114225.8, ENSMUST00000114226.8, ENSMUST00000114227.8, ENSMUST00000114228.8, ENSMUST00000204511.3, ENSMUST00000204862.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CTGAGGTGGCCACCCCCAATCCAGCAGAGATCAAGAGCCCTGGAGTaGAAGCTGCCTCCTGAGGGTCTCTTCCCCTTTCTTAGCCTCAGG | + |
Preference number: 1 (lower is better) Translates to: LRWPPPIQQRSRALE*KLPPEGLFPFLSLR Trigger: CCTGAGGCTAAGAAAGGGGAAGAGACCCTCAGGAGGCAGCTTCCACTCCAGGGCTCTTGATCTCTGCTGGATTGGGGGTGGCCACCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR TCA 90 bp | CTGGGAATAGGGAGGCTCTCAGCTTCTTCTGCTTCTATTCCCTTGTaGCAACAAGGGAAGGGGAGGCTCAGAGAGCTGACGTGCCTGGTC | + |
Preference number: 1 (lower is better) Translates to: LGIGRLSASSASIPL*QQGKGRLRELTCLV Trigger: GACCAGGCACGTCAGCTCTCTGAGCCTCCCCTTCCCTTGTTGTCACAAGGGAATAGAAGCAGAAGAAGCTGAGAGCCTCCCTATTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR TCA 90 bp | CTCCCGCCTGAGCAGGTGTCTTTAATCCAGCTGGGAGCTAAGCAGTaGGAACAGGTTGTGGGCAGTGCTATGGATTTCACACGCTCAGTT | + |
Preference number: 1 (lower is better) Translates to: LPPEQVSLIQLGAKQ*EQVVGSAMDFTRSV Trigger: AACTGAGCGTGTGAAATCCATAGCACTGCCCACAACCTGTTCTCACTGCTTAGCTCCCAGCTGGATTAAAGACACCTGCTCAGGCGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR GCA 90 bp | CATTCCACCAGGGCATCTGGGAATAGGGAGGCTCTCAGCTTCTTCTaGTTCTATTCCCTTGTGACAACAAGGGAAGGGGAGGCTCAGAGA | + |
Preference number: 1 (lower is better) Translates to: HSTRASGNREALSFF*FYSLVTTREGEAQR Trigger: TCTCTGAGCCTCCCCTTCCCTTGTTGTCACAAGGGAATAGAAGCAGAAGAAGCTGAGAGCCTCCCTATTCCCAGATGCCCTGGTGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR TCA 90 bp | CGAGAGAAGGGTGTTTTAGTTACTAGCTGTGGTTACCAGGTAAGCTaGAGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGC | + |
Preference number: 1 (lower is better) Translates to: REKGVLVTSCGYQVS*RNPFRLLLWFALRG Trigger: GCCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCTTCAGCTTACCTGGTAACCACAGCTAGTAACTAAAACACCCTTCTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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3UTR GCA 90 bp | AGCCAAGTTGTCAGTGTGGGAAAAACACTCCACATGGGACTTCTGTaGATCATGACATCACCAACATACTGCTGCAGTTACCGGCTTCAT | + |
Preference number: 1 (lower is better) Translates to: SQVVSVGKTLHMGLL*IMTSPTYCCSYRLH Trigger: ATGAAGCCGGTAACTGCAGCAGTATGTTGGTGATGTCATGATGCACAGAAGTCCCATGTGGAGTGTTTTTCCCACACTGACAACTTGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR GCA 90 bp | AAGTCACCCGGCACAGGACTGACCAGGCCATCGACCACTGGTAAATaGTCTATTCTATCTGATTTGACGTATTTTTCCTGCTTACAGGCT | + |
Preference number: 1 (lower is better) Translates to: KSPGTGLTRPSTTGK*SILSDLTYFSCLQA Trigger: AGCCTGTAAGCAGGAAAAATACGTCAAATCAGATAGAATAGAGCATTTACCAGTGGTCGATGGCCTGGTCAGTCCTGTGCCGGGTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR TCA 90 bp | TTGTCAGTGTGGGAAAAACACTCCACATGGGACTTCTGTGCATCATaGCATCACCAACATACTGCTGCAGTTACCGGCTTCATAAGTGAA | + |
Preference number: 1 (lower is better) Translates to: LSVWEKHSTWDFCAS*HHQHTAAVTGFISE Trigger: TTCACTTATGAAGCCGGTAACTGCAGCAGTATGTTGGTGATGTCATGATGCACAGAAGTCCCATGTGGAGTGTTTTTCCCACACTGACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR TCA 90 bp | ATAAAGAGTATAGTGCTCGCGGGAGTGTTAGTTCAGACAACAGACTaGACACACAGAAAGGAAGCCAAGTTGTCAGTGTGGGAAAAACAC | + |
Preference number: 1 (lower is better) Translates to: IKSIVLAGVLVQTTD*THRKEAKLSVWEKH Trigger: GTGTTTTTCCCACACTGACAACTTGGCTTCCTTTCTGTGTGTTCAGTCTGTTGTCTGAACTAACACTCCCGCGAGCACTATACTCTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR TCA 90 bp | CAAACATCATGGCATACTTCAGTATTACATTTATTTCATTGGAGGTaGCTCTTGGGCCTGTGCATGGACACCCCTTTAAGACAAATTCAG | + |
Preference number: 1 (lower is better) Translates to: QTSWHTSVLHLFHWR*LLGLCMDTPLRQIQ Trigger: CTGAATTTGTCTTAAAGGGGTGTCCATGCACAGGCCCAAGAGTCACCTCCAATGAAATAAATGTAATACTGAAGTATGCCATGATGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR TCA 90 bp | GAAATAGTTAAGTCCATAAACCTAGAACAGGCACTGGATAACAAGTaGTTAGGTGAGTACACACTACAGACAAACTGGTATTTGAAGCAG | + |
Preference number: 1 (lower is better) Translates to: EIVKSINLEQALDNK*LGEYTLQTNWYLKQ Trigger: CTGCTTCAAATACCAGTTTGTCTGTAGTGTGTACTCACCTAATCACTTGTTATCCAGTGCCTGTTCTAGGTTTATGGACTTAACTATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR TCA 90 bp | CAGATCTGGTTAGGAAGTTACAAGATATTTATTGTCTCTAATCAATaGAAAGGCAACAAAACCTCCTGGGACCTCAAGTTCATTTCTTAC | + |
Preference number: 1 (lower is better) Translates to: QIWLGSYKIFIVSNQ*KGNKTSWDLKFISY Trigger: GTAAGAAATGAACTTGAGGTCCCAGGAGGTTTTGTTGCCTTTTCATTGATTAGAGACAATAAATATCTTGTAACTTCCTAACCAGATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR GCA 90 bp | ACCACTGGTAAATGCTCTATTCTATCTGATTTGACGTATTTTTCCTaGTTACAGGCTTACGATGAAAGAAAACAACAAACATCATGGCAT | + |
Preference number: 1 (lower is better) Translates to: TTGKCSILSDLTYFS*LQAYDERKQQTSWH Trigger: ATGCCATGATGTTTGTTGTTTTCTTTCATCGTAAGCCTGTAAGCAGGAAAAATACGTCAAATCAGATAGAATAGAGCATTTACCAGTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR TCA 90 bp | CATGATTTCAAAGAAATGGAATATTTAGCTACAACCCGCAGCTTGTaGACTATCTGCTACATTTCCCCTCTTTCAAAATATGTATGTTTC | + |
Preference number: 1 (lower is better) Translates to: HDFKEMEYLATTRSL*TICYISPLSKYVCF Trigger: GAAACATACATATTTTGAAAGAGGGGAAATGTAGCAGATAGTTCACAAGCTGCGGGTTGTAGCTAAATATTCCATTTCTTTGAAATCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR-3UTR GCA 90 bp | GACGTGCCTGGTCCTAAGTCACCCGGCACAGGACTGACCAGGCCATCGACCACTCCCTGGAGTGGAAGCTaGCTCCTGAGGGTCTCTTCC | + |
Preference number: 2 (lower is better) Translates to: DVPGPKSPGTGLTRPSTTPWSGS*LLRVSS Trigger: GGAAGAGACCCTCAGGAGGCAGCTTCCACTCCAGGG...AGTGGTCGATGGCCTGGTCAGTCCTGTGCCGGGTGACTTAGGACCAGGCACGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR-3UTR CCA 90 bp | GCTGCTCTAGCAGTAAGGGCAGGTACCATGCTGGTGAGGAGAAAGGGGCAGGGCTCAAGAGCCCTGGAGTaGAAGCTGCCTCCTGAGGGT | + |
Preference number: 2 (lower is better) Translates to: AALAVRAGTMLVRRKGQGSRALE*KLPPEG Trigger: ACCCTCAGGAGGCAGCTTCCACTCCAGGGCTCTTGA...GCCCTGCCCCTTTCTCCTCACCAGCATGGTACCTGCCCTTACTGCTAGAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR-3UTR GCA 90 bp | CTCTCGGTCCCCTCTTCCATTCCAGTCATGAGGGTGGAAGTTTCTGAGGTGGCCCCCTGGAGTGGAAGCTaGCTCCTGAGGGTCTCTTCC | + |
Preference number: 2 (lower is better) Translates to: LSVPSSIPVMRVEVSEVAPWSGS*LLRVSS Trigger: GGAAGAGACCCTCAGGAGGCAGCTTCCACTCCAGGG...GGCCACCTCAGAAACTTCCACCCTCATGACTGGAATGGAAGAGGGGACCGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR-3UTR CCA 90 bp | ACTAGCAAGCCTCCCTTTGGAAGGGCCCTCCCCCAGGGTGGTTTGTGGACATGGCAGGAAGTTTCAGGGTaGTTAGTGCCCATAGTGCAA | + |
Preference number: 2 (lower is better) Translates to: TSKPPFGRALPQGGLWTWQEVSG*LVPIVQ Trigger: TTGCACTATGGGCACTAACCACCCTGAAACTTCCTG...CCATGTCCACAAACCACCCTGGGGGAGGGCCCTTCCAAAGGGAGGCTTGCTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR-3UTR GCA 90 bp | ACTAGCAAGCCTCCCTTTGGAAGGGCCCTCCCCCAGGGTGGTTTGTGGACATGGGGAAGTATAGGCATCTaGAAAGAGCCCAAGTGTCTT | + |
Preference number: 2 (lower is better) Translates to: TSKPPFGRALPQGGLWTWGSIGI*KEPKCL Trigger: AAGACACTTGGGCTCTTTGCAGATGCCTATACTTCC...CCATGTCCACAAACCACCCTGGGGGAGGGCCCTTCCAAAGGGAGGCTTGCTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR-3UTR GCA 90 bp | TGGGATCCCTACTGGACACTGCGAGGGTACGTGGGCTATTTTCACAATTGGAGTGTTGCTGCTGTGGTTTaGGTTAAGAGGCAAGGGGCG | + |
Preference number: 2 (lower is better) Translates to: WDPYWTLRGYVGYFHNWSVAAVV*VKRQGA Trigger: CGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAAC...ACTCCAATTGTGAAAATAGCCCACGTACCCTCGCAGTGTCCAGTAGGGATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR-3UTR CCA 90 bp | GCCTCTGAGTCACTTAGGAACAGGACTGCATGTTTACCACCAAGAAGCATGACGTCAAGAGCCCTGGAGTaGAAGCTGCCTCCTGAGGGT | + |
Preference number: 2 (lower is better) Translates to: ASESLRNRTACLPPRSMTSRALE*KLPPEG Trigger: ACCCTCAGGAGGCAGCTTCCACTCCAGGGCTCTTGA...CGTCATGCTTCTTGGTGGTAAACATGCAGTCCTGTTCCTAAGTGACTCAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR-3UTR TCA 90 bp | GACGTGCCTGGTCCTAAGTCACCCGGCACAGGACTGACCAGGCCATCGACCACTTCATTATTATTATTGTaGGCACAGCTCAGATCTGGT | + |
Preference number: 2 (lower is better) Translates to: DVPGPKSPGTGLTRPSTTSLLLL*AQLRSG Trigger: ACCAGATCTGAGCTGTGCTCACAATAATAATAATGA...AGTGGTCGATGGCCTGGTCAGTCCTGTGCCGGGTGACTTAGGACCAGGCACGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR-3UTR GCA 90 bp | GCTGCTCTAGCAGTAAGGGCAGGTACCATGCTGGTGAGGAGAAAGGGGCAGGGCATTTTAATTTGCCGGTaGTTAGACAATGTAGGTCTT | + |
Preference number: 2 (lower is better) Translates to: AALAVRAGTMLVRRKGQGILICR*LDNVGL Trigger: AAGACCTACATTGTCTAAGCACCGGCAAATTAAAAT...GCCCTGCCCCTTTCTCCTCACCAGCATGGTACCTGCCCTTACTGCTAGAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR-3UTR TCA 90 bp | ATCCTTTCTTGGTTATGTGCCTCTGGGATCCCTACTGGACACTGCGAGGGTACGAGAAGCCCAAATGACTaGTATGAGTTAAGACCCCAT | + |
Preference number: 2 (lower is better) Translates to: ILSWLCASGIPTGHCEGTRSPND*YELRPH Trigger: ATGGGGTCTTAACTCATATCAGTCATTTGGGCTTCT...CGTACCCTCGCAGTGTCCAGTAGGGATCCCAGAGGCACATAACCAAGAAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR-3UTR GCA 90 bp | AAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATATGTTGCTGCTGTGGTTTaGGTTAAGAGGCAAGGGGCG | + |
Preference number: 2 (lower is better) Translates to: KTSFPQLPCHFPYTVTQYVAAVV*VKRQGA Trigger: CGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAAC...ATATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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3UTR-3UTR GCA 90 bp | GGAAGCCAAGTTGTCAGTGTGGGAAAAACACTCCACATGGGACTTCTGTGCATCGGAAGTATAGGCATCTaGAAAGAGCCCAAGTGTCTT | + |
Preference number: 2 (lower is better) Translates to: GSQVVSVGKTLHMGLLCIGSIGI*KEPKCL Trigger: AAGACACTTGGGCTCTTTGCAGATGCCTATACTTCC...GATGCACAGAAGTCCCATGTGGAGTGTTTTTCCCACACTGACAACTTGGCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR-3UTR CCA 90 bp | GGAAGCCAAGTTGTCAGTGTGGGAAAAACACTCCACATGGGACTTCTGTGCATCAGCAGATGGGTAACGTaGAGAAATTCTGATGCCTCT | + |
Preference number: 2 (lower is better) Translates to: GSQVVSVGKTLHMGLLCISRWVT*RNSDAS Trigger: AGAGGCATCAGAATTTCTCCACGTTACCCATCTGCT...GATGCACAGAAGTCCCATGTGGAGTGTTTTTCCCACACTGACAACTTGGCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR-3UTR GCA 90 bp | GAAGTGATTCTCGACATTTTAATTTGCCGGTGCTTAGACAATGTAGGTCTTGACGTTGCTGCTGTGGTTTaGGTTAAGAGGCAAGGGGCG | + |
Preference number: 2 (lower is better) Translates to: EVILDILICRCLDNVGLDVAAVV*VKRQGA Trigger: CGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAAC...GTCAAGACCTACATTGTCTAAGCACCGGCAAATTAAAATGTCGAGAATCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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3UTR-3UTR GCA 90 bp | AGGGGCCAGCACAATTCCAAGAGAGGAGTGAGAACAGCATCAACTCATTATAATATGGTTGTAGACACATaGCTCCTCCCCAGATCCCTT | + |
Preference number: 2 (lower is better) Translates to: RGQHNSKRGVRTASTHYNMVVDT*LLPRSL Trigger: AAGGGATCTGGGGAGGAGGCATGTGTCTACAACCAT...ATTATAATGAGTTGATGCTGTTCTCACTCCTCTCTTGGAATTGTGCTGGCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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3UTR-3UTR TCA 90 bp | ATTGTGAGCACAGCTCAGATCTGGTTAGGAAGTTACAAGATATTTATTGTCTCTGTGGAAGCTGCCTCCTaGGGGTCTCTTCCCCTTTCT | + |
Preference number: 2 (lower is better) Translates to: IVSTAQIWLGSYKIFIVSVEAAS*GSLPLS Trigger: AGAAAGGGGAAGAGACCCTCAGGAGGCAGCTTCCAC...AGAGACAATAAATATCTTGTAACTTCCTAACCAGATCTGAGCTGTGCTCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR-3UTR GCA 90 bp | GGCAGTGCTATGGATTTCACACGCTCAGTTCCGAGTGCCAAGCAGATGGGTAACAATGCAGATGATCTTTaGAACGTTCTTTCATTACCT | + |
Preference number: 2 (lower is better) Translates to: GSAMDFTRSVPSAKQMGNNADDL*NVLSLP Trigger: AGGTAATGAAAGAACGTTGCAAAGATCATCTGCATT...GTTACCCATCTGCTTGGCACTCGGAACTGAGCGTGTGAAATCCATAGCACTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR-3UTR GCA 90 bp | GCCTCTGAGTCACTTAGGAACAGGACTGCATGTTTACCACCAAGAAGCATGACGCTCGACATTTTAATTTaGCGGTGCTTAGACAATGTA | + |
Preference number: 2 (lower is better) Translates to: ASESLRNRTACLPPRSMTLDILI*RCLDNV Trigger: TACATTGTCTAAGCACCGGCAAATTAAAATGTCGAG...CGTCATGCTTCTTGGTGGTAAACATGCAGTCCTGTTCCTAAGTGACTCAGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR-3UTR GCA 90 bp | TTACCACCAAGAAGCATGACGCTCAGAGCCCAGGCATTAGATATTAAAATACATATGGTTGTAGACACATaGCTCCTCCCCAGATCCCTT | + |
Preference number: 2 (lower is better) Translates to: LPPRSMTLRAQALDIKIHMVVDT*LLPRSL Trigger: AAGGGATCTGGGGAGGAGGCATGTGTCTACAACCAT...ATGTATTTTAATATCTAATGCCTGGGCTCTGAGCGTCATGCTTCTTGGTGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR-3UTR GCA 90 bp | GAAGTGATTCTCGACATTTTAATTTGCCGGTGCTTAGACAATGTAGGTCTTGACTTCCCACAACTCCCCTaGCATTTTCCTTATACAGTA | + |
Preference number: 2 (lower is better) Translates to: EVILDILICRCLDNVGLDFPQLP*HFPYTV Trigger: TACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAA...GTCAAGACCTACATTGTCTAAGCACCGGCAAATTAAAATGTCGAGAATCACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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3UTR-3UTR GCA 90 bp | CAGCATCAACTCATTATAATGCAGATGATCTTTGCAACGTTCTTTCATTACCTTATGGTTGTAGACACATaGCTCCTCCCCAGATCCCTT | + |
Preference number: 2 (lower is better) Translates to: QHQLIIMQMIFATFFHYLMVVDT*LLPRSL Trigger: AAGGGATCTGGGGAGGAGGCATGTGTCTACAACCAT...AAGGTAATGAAAGAACGTTGCAAAGATCATCTGCATTATAATGAGTTGATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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3UTR-3UTR CCA 90 bp | CAGCATCAACTCATTATAATGCAGATGATCTTTGCAACGTTCTTTCATTACCTTCAGGAAGTTTCAGGGTaGTTAGTGCCCATAGTGCAA | + |
Preference number: 2 (lower is better) Translates to: QHQLIIMQMIFATFFHYLQEVSG*LVPIVQ Trigger: TTGCACTATGGGCACTAACCACCCTGAAACTTCCTG...AAGGTAATGAAAGAACGTTGCAAAGATCATCTGCATTATAATGAGTTGATGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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3UTR CCA 72 bp | GGTGGCCACCCCCAATCCAGCAGAGATCAAGAGCCCTaGAGTGGAAGCTGCCTCCTGAGGGTCTCTTCCCCT | + |
Preference number: 3 (lower is better) Translates to: GGHPQSSRDQEP*SGSCLLRVSSP Trigger: AGGGGAAGAGACCCTCAGGAGGCAGCTTCCACTCCAGGGCTCTTGATCTCTGCTGGATTGGGGGTGGCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR CCA 72 bp | CCACCCCCAATCCAGCAGAGATCAAGAGCCCTGGAGTaGAAGCTGCCTCCTGAGGGTCTCTTCCCCTTTCTT | + |
Preference number: 3 (lower is better) Translates to: PPPIQQRSRALE*KLPPEGLFPFL Trigger: AAGAAAGGGGAAGAGACCCTCAGGAGGCAGCTTCCACTCCAGGGCTCTTGATCTCTGCTGGATTGGGGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR TCA 72 bp | CTGACGTGCCTGGTCCTAAGTCACCCGGCACAGGACTaGCCAGGCCATCGACCACTGGTAAATGCTCTATTC | + |
Preference number: 3 (lower is better) Translates to: LTCLVLSHPAQD*PGHRPLVNALF Trigger: GAATAGAGCATTTACCAGTGGTCGATGGCCTGGTCAGTCCTGTGCCGGGTGACTTAGGACCAGGCACGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR GCA 72 bp | CAATCCAGCAGAGATCAAGAGCCCTGGAGTGGAAGCTaGCTCCTGAGGGTCTCTTCCCCTTTCTTAGCCTCA | + |
Preference number: 3 (lower is better) Translates to: QSSRDQEPWSGS*LLRVSSPFLAS Trigger: TGAGGCTAAGAAAGGGGAAGAGACCCTCAGGAGGCAGCTTCCACTCCAGGGCTCTTGATCTCTGCTGGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR GCA 72 bp | AAACTGGGAAGGAGGGAATGTCCCTCTACAAGCAGCTaGTCTAGCAGTAAGGGCAGGTACCATGCTGGTGAG | + |
Preference number: 3 (lower is better) Translates to: KLGRRECPSTSS*SSSKGRYHAGE Trigger: CTCACCAGCATGGTACCTGCCCTTACTGCTAGAGCAGCTGCTTGTAGAGGGACATTCCCTCCTTCCCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR GCA 72 bp | AGGGCATCTGGGAATAGGGAGGCTCTCAGCTTCTTCTaGTTCTATTCCCTTGTGACAACAAGGGAAGGGGAG | + |
Preference number: 3 (lower is better) Translates to: RASGNREALSFF*FYSLVTTREGE Trigger: CTCCCCTTCCCTTGTTGTCACAAGGGAATAGAAGCAGAAGAAGCTGAGAGCCTCCCTATTCCCAGATGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR CCA 72 bp | GCCTCTGGGATCCCTACTGGACACTGCGAGGGTACGTaGGCTATTTTCACAATTGGAGTAAAAGTGAGGACC | + |
Preference number: 3 (lower is better) Translates to: ASGIPTGHCEGT*AIFTIGVKVRT Trigger: GGTCCTCACTTTTACTCCAATTGTGAAAATAGCCCACGTACCCTCGCAGTGTCCAGTAGGGATCCCAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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3UTR CCA 72 bp | GAGCTAAGCAGTGAGAACAGGTTGTGGGCAGTGCTATaGATTTCACACGCTCAGTTCCGAGTGCCAAGCAGA | + |
Preference number: 3 (lower is better) Translates to: ELSSENRLWAVL*ISHAQFRVPSR Trigger: TCTGCTTGGCACTCGGAACTGAGCGTGTGAAATCCATAGCACTGCCCACAACCTGTTCTCACTGCTTAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR CCA 72 bp | CACGCTCAGTTCCGAGTGCCAAGCAGATGGGTAACGTaGAGAAATTCTGATGCCTCTGAGTCACTTAGGAAC | + |
Preference number: 3 (lower is better) Translates to: HAQFRVPSRWVT*RNSDASESLRN Trigger: GTTCCTAAGTGACTCAGAGGCATCAGAATTTCTCCACGTTACCCATCTGCTTGGCACTCGGAACTGAGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR TCA 72 bp | GAGCAGGTGTCTTTAATCCAGCTGGGAGCTAAGCAGTaGGAACAGGTTGTGGGCAGTGCTATGGATTTCACA | + |
Preference number: 3 (lower is better) Translates to: EQVSLIQLGAKQ*EQVVGSAMDFT Trigger: TGTGAAATCCATAGCACTGCCCACAACCTGTTCTCACTGCTTAGCTCCCAGCTGGATTAAAGACACCTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR GCA 72 bp | TCTTGGTTATGTGCCTCTGGGATCCCTACTGGACACTaGGAGGGTACGTGGGCTATTTTCACAATTGGAGTA | + |
Preference number: 3 (lower is better) Translates to: SWLCASGIPTGH*EGTWAIFTIGV Trigger: TACTCCAATTGTGAAAATAGCCCACGTACCCTCGCAGTGTCCAGTAGGGATCCCAGAGGCACATAACCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
||
3UTR TCA 72 bp | GGTGTTTTAGTTACTAGCTGTGGTTACCAGGTAAGCTaGAGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCG | + |
Preference number: 3 (lower is better) Translates to: GVLVTSCGYQVS*RNPFRLLLWFA Trigger: CGCAAACCACAGCAGCAACCTGAAGGGATTCCTTCAGCTTACCTGGTAACCACAGCTAGTAACTAAAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
||
3UTR TCA 72 bp | TGGGAAAAACACTCCACATGGGACTTCTGTGCATCATaGCATCACCAACATACTGCTGCAGTTACCGGCTTC | + |
Preference number: 3 (lower is better) Translates to: WEKHSTWDFCAS*HHQHTAAVTGF Trigger: GAAGCCGGTAACTGCAGCAGTATGTTGGTGATGTCATGATGCACAGAAGTCCCATGTGGAGTGTTTTTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
||
3UTR CCA 72 bp | AATCCTTTCTTGGTTATGTGCCTCTGGGATCCCTACTaGACACTGCGAGGGTACGTGGGCTATTTTCACAAT | + |
Preference number: 3 (lower is better) Translates to: NPFLVMCLWDPY*TLRGYVGYFHN Trigger: ATTGTGAAAATAGCCCACGTACCCTCGCAGTGTCCAGTAGGGATCCCAGAGGCACATAACCAAGAAAGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
||
3UTR-3UTR CAA 90 bp | AGGGGCCAGCACAATTCCAAGAGAGGAGTGAGAACAGCATCAACTCATTATAATAGGAATCCCTTCAGGTaGCTGCTGTGGTTTGCGTTA | + |
Preference number: 3 (lower is better) Translates to: RGQHNSKRGVRTASTHYNRNPFR*LLWFAL Trigger: TAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT...ATTATAATGAGTTGATGCTGTTCTCACTCCTCTCTTGGAATTGTGCTGGCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
||
3UTR-3UTR CAA 90 bp | AAAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATAAGGAATCCCTTCAGGTaGCTGCTGTGGTTTGCGTTA | + |
Preference number: 3 (lower is better) Translates to: KDKLPTTPLPFSLYSNPIRNPFR*LLWFAL Trigger: TAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT...TATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
||
3UTR-3UTR CAA 90 bp | GAGAGACTTCAGGGTCTATTATTCCGAGAGAAGGGTGTTTTAGTTACTAGCTGTAGGAATCCCTTCAGGTaGCTGCTGTGGTTTGCGTTA | + |
Preference number: 3 (lower is better) Translates to: ERLQGLLFREKGVLVTSCRNPFR*LLWFAL Trigger: TAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT...ACAGCTAGTAACTAAAACACCCTTCTCTCGGAATAATAGACCCTGAAGTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
||
3UTR-3UTR CAA 90 bp | TTACCACCAAGAAGCATGACGCTCAGAGCCCAGGCATTAGATATTAAAATACATAGGAATCCCTTCAGGTaGCTGCTGTGGTTTGCGTTA | + |
Preference number: 3 (lower is better) Translates to: LPPRSMTLRAQALDIKIHRNPFR*LLWFAL Trigger: TAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT...ATGTATTTTAATATCTAATGCCTGGGCTCTGAGCGTCATGCTTCTTGGTGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
||
3UTR CCA 72 bp | AAAATATGTATGTTTCTTCAAGATGCTCTGGAGTCATaGAATCTTGTGTACGCTATCTTGCCAGGGCCACGG | + |
Preference number: 3 (lower is better) Translates to: KICMFLQDALES*NLVYAILPGPR Trigger: CCGTGGCCCTGGCAAGATAGCGTACACAAGATTCCATGACTCCAGAGCATCTTGAAGAAACATACATATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
||
3UTR TCA 72 bp | TGGCATACTTCAGTATTACATTTATTTCATTGGAGGTaGCTCTTGGGCCTGTGCATGGACACCCCTTTAAGA | + |
Preference number: 3 (lower is better) Translates to: WHTSVLHLFHWR*LLGLCMDTPLR Trigger: TCTTAAAGGGGTGTCCATGCACAGGCCCAAGAGTCACCTCCAATGAAATAAATGTAATACTGAAGTATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
||
3UTR TCA 72 bp | AATCCAAACACAGAAAACGCAGACCAAGCCTTCCCTTaGAAGTGTATGACACTCCTTTTCTTTCTGATGGTA | + |
Preference number: 3 (lower is better) Translates to: NPNTENADQAFP*KCMTLLFFLMV Trigger: TACCATCAGAAAGAAAAGGAGTGTCATACACTTTCAAGGGAAGGCTTGGTCTGCGTTTTCTGTGTTTGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
||
3UTR-3UTR CAA 90 bp | CAGCATCAACTCATTATAATGCAGATGATCTTTGCAACGTTCTTTCATTACCTTAGGAATCCCTTCAGGTaGCTGCTGTGGTTTGCGTTA | + |
Preference number: 3 (lower is better) Translates to: QHQLIIMQMIFATFFHYLRNPFR*LLWFAL Trigger: TAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT...AAGGTAATGAAAGAACGTTGCAAAGATCATCTGCATTATAATGAGTTGATGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
||
3UTR TCA 72 bp | CATCGACCACTGGTAAATGCTCTATTCTATCTGATTTaGCGTATTTTTCCTGCTTACAGGCTTACGATGAAA | + |
Preference number: 3 (lower is better) Translates to: HRPLVNALFYLI*RIFPAYRLTMK Trigger: TTTCATCGTAAGCCTGTAAGCAGGAAAAATACGTCAAATCAGATAGAATAGAGCATTTACCAGTGGTCGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
||
3UTR GCA 72 bp | AGGTTTTTGACTGAAGTGATTCTCGACATTTTAATTTaGCGGTGCTTAGACAATGTAGGTCTTGACATATCT | + |
Preference number: 3 (lower is better) Translates to: RFLTEVILDILI*RCLDNVGLDIS Trigger: AGATATGTCAAGACCTACATTGTCTAAGCACCGGCAAATTAAAATGTCGAGAATCACTTCAGTCAAAAACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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3UTR TCA 72 bp | TTAGGAAGTTACAAGATATTTATTGTCTCTAATCAATaGAAAGGCAACAAAACCTCCTGGGACCTCAAGTTC | + |
Preference number: 3 (lower is better) Translates to: LGSYKIFIVSNQ*KGNKTSWDLKF Trigger: GAACTTGAGGTCCCAGGAGGTTTTGTTGCCTTTTCATTGATTAGAGACAATAAATATCTTGTAACTTCCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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3UTR TCA 72 bp | AAAGAAATGGAATATTTAGCTACAACCCGCAGCTTGTaGACTATCTGCTACATTTCCCCTCTTTCAAAATAT | + |
Preference number: 3 (lower is better) Translates to: KEMEYLATTRSL*TICYISPLSKY Trigger: ATATTTTGAAAGAGGGGAAATGTAGCAGATAGTTCACAAGCTGCGGGTTGTAGCTAAATATTCCATTTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
||
CDS-3UTR GCA 90 bp | CTAGCAAGCCTCCCTTTGGAAGGGCCCTCCCCCAGGGTGGTTTGTGGACATGGTGCTTCCAATCTCAGCTaGTGCACAGTTCTCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: LASLPLEGPSPRVVCGHGASNLS*CTVLLA Trigger: AGCCAGGAGAACTGTGCAGCAGCTGAGATTGGAAGC...ACCATGTCCACAAACCACCCTGGGGGAGGGCCCTTCCAAAGGGAGGCTTGCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
||
CDS-3UTR GCA 90 bp | AGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGCAAGGGGCGCTTCGGGTCGCTCCGGGCATaGTCCTCACAGTATGACATC | + |
Preference number: 4 (lower is better) Translates to: RNPFRLLLWFALRGKGRFGSLRA*SSQYDI Trigger: GATGTCATACTGTGAGGAGCATGCCCGGAGCGACCC...GAAGCGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
||
CDS-3UTR CCA 90 bp | CTCCTCCCTCTCCGAGATTGTGAGGCTCTCGGTCCCCTCTTCCATTCCAGTCATGCTGCACAGTTCTCCTaGCTTGGGCTATGCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: LLPLRDCEALGPLFHSSHAAQFS*LGLCCW Trigger: CCAACAGCATAGCCCAAGCCAGGAGAACTGTGCAGC...ATGACTGGAATGGAAGAGGGGACCGAGAGCCTCACAATCTCGGAGAGGGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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CDS-3UTR TCA 90 bp | ACTAGCAAGCCTCCCTTTGGAAGGGCCCTCCCCCAGGGTGGTTTGTGGACATGGAGGTCTTCTTATCCTTaGACGGGTTTTCTGAGGTCG | + |
Preference number: 4 (lower is better) Translates to: TSKPPFGRALPQGGLWTWRSSYP*TGFLRS Trigger: CGACCTCAGAAAACCCGTTCAAGGATAAGAAGACCT...CCATGTCCACAAACCACCCTGGGGGAGGGCCCTTCCAAAGGGAGGCTTGCTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
||
CDS-3UTR TCA 90 bp | CCCCAATCCAGCAGAGATCAAGAGCCCTGGAGTGGAAGCTGCCTCCTGAGGGTCAGGTCTTCTTATCCTTaGACGGGTTTTCTGAGGTCG | + |
Preference number: 4 (lower is better) Translates to: PQSSRDQEPWSGSCLLRVRSSYP*TGFLRS Trigger: CGACCTCAGAAAACCCGTTCAAGGATAAGAAGACCT...GACCCTCAGGAGGCAGCTTCCACTCCAGGGCTCTTGATCTCTGCTGGATTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
||
CDS-3UTR GCA 90 bp | AGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGCAAGGGGCGCTTCTCCTGGCTTGGGCTATaGTGTTGGTGCTTGCCGTCT | + |
Preference number: 4 (lower is better) Translates to: RNPFRLLLWFALRGKGRFSWLGL*CWCLPS Trigger: AGACGGCAAGCACCAACAGCATAGCCCAAGCCAGGA...GAAGCGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CCA 90 bp | AGCCTCCCTTTGGAAGGGCCCTCCCCCAGGGTGGTTTGTGGACATGGTAGTGTTACAGTTCTCCTGGCTTaGGCTATGCTGTTGGTGCTT | + |
Preference number: 4 (lower is better) Translates to: SLPLEGPSPRVVCGHGSVTVLLA*AMLLVL Trigger: AAGCACCAACAGCATAGCCCAAGCCAGGAGAACTGT...AACACTACCATGTCCACAAACCACCCTGGGGGAGGGCCCTTCCAAAGGGAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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CDS-3UTR CCA 90 bp | AGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGCAAGGGGCGCTTCGCTGCACAGTTCTCCTaGCTTGGGCTATGCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: RNPFRLLLWFALRGKGRFAAQFS*LGLCCW Trigger: CCAACAGCATAGCCCAAGCCAGGAGAACTGTGCAGC...GAAGCGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | AGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGCAAGGGGCGCTTCGCTTCCAATCTCAGCTaGTGCACAGTTCTCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: RNPFRLLLWFALRGKGRFASNLS*CTVLLA Trigger: AGCCAGGAGAACTGTGCAGCAGCTGAGATTGGAAGC...GAAGCGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | CCAGGTAAGCTGAAGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGGGGTCGCTCCGGGCATaGTCCTCACAGTATGACATC | + |
Preference number: 4 (lower is better) Translates to: PGKLKESLQVAAVVCVKRGSLRA*SSQYDI Trigger: GATGTCATACTGTGAGGAGCATGCCCGGAGCGACCC...CCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCTTCAGCTTACCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CCA 90 bp | CTCCTCCCTCTCCGAGATTGTGAGGCTCTCGGTCCCCTCTTCCATTCCAGTCATACAGTTCTCCTGGCTTaGGCTATGCTGTTGGTGCTT | + |
Preference number: 4 (lower is better) Translates to: LLPLRDCEALGPLFHSSHTVLLA*AMLLVL Trigger: AAGCACCAACAGCATAGCCCAAGCCAGGAGAACTGT...ATGACTGGAATGGAAGAGGGGACCGAGAGCCTCACAATCTCGGAGAGGGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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CDS-3UTR CCA 90 bp | AGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGCAAGGGGCGCTTCACAGTTCTCCTGGCTTaGGCTATGCTGTTGGTGCTT | + |
Preference number: 4 (lower is better) Translates to: RNPFRLLLWFALRGKGRFTVLLA*AMLLVL Trigger: AAGCACCAACAGCATAGCCCAAGCCAGGAGAACTGT...GAAGCGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR TCA 90 bp | AGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGCAAGGGGCGCTTCAGGTCTTCTTATCCTTaGACGGGTTTTCTGAGGTCG | + |
Preference number: 4 (lower is better) Translates to: RNPFRLLLWFALRGKGRFRSSYP*TGFLRS Trigger: CGACCTCAGAAAACCCGTTCAAGGATAAGAAGACCT...GAAGCGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | CCAGGTAAGCTGAAGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGGCTTCCAATCTCAGCTaGTGCACAGTTCTCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: PGKLKESLQVAAVVCVKRASNLS*CTVLLA Trigger: AGCCAGGAGAACTGTGCAGCAGCTGAGATTGGAAGC...CCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCTTCAGCTTACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CCA 90 bp | TGGTTACCAGGTAAGCTGAAGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTGCTGCACAGTTCTCCTaGCTTGGGCTATGCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: WLPGKLKESLQVAAVVCVAAQFS*LGLCCW Trigger: CCAACAGCATAGCCCAAGCCAGGAGAACTGTGCAGC...AACGCAAACCACAGCAGCAACCTGAAGGGATTCCTTCAGCTTACCTGGTAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR TCA 90 bp | CCAGGTAAGCTGAAGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGAGGTCTTCTTATCCTTaGACGGGTTTTCTGAGGTCG | + |
Preference number: 4 (lower is better) Translates to: PGKLKESLQVAAVVCVKRRSSYP*TGFLRS Trigger: CGACCTCAGAAAACCCGTTCAAGGATAAGAAGACCT...CCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCTTCAGCTTACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | AGGGGCCAGCACAATTCCAAGAGAGGAGTGAGAACAGCATCAACTCATTATAATGGGTCGCTCCGGGCATaGTCCTCACAGTATGACATC | + |
Preference number: 4 (lower is better) Translates to: RGQHNSKRGVRTASTHYNGSLRA*SSQYDI Trigger: GATGTCATACTGTGAGGAGCATGCCCGGAGCGACCC...ATTATAATGAGTTGATGCTGTTCTCACTCCTCTCTTGGAATTGTGCTGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR CCA 90 bp | AGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGCAAGGGGCGCTTCCCTTTATTCTTTCGATaGAGGCTTCCAATCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: RNPFRLLLWFALRGKGRFPLFFR*RLPISA Trigger: AGCTGAGATTGGAAGCCTCCATCGAAAGAATAAAGG...GAAGCGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | GAGAGACTTCAGGGTCTATTATTCCGAGAGAAGGGTGTTTTAGTTACTAGCTGTGGGTCGCTCCGGGCATaGTCCTCACAGTATGACATC | + |
Preference number: 4 (lower is better) Translates to: ERLQGLLFREKGVLVTSCGSLRA*SSQYDI Trigger: GATGTCATACTGTGAGGAGCATGCCCGGAGCGACCC...ACAGCTAGTAACTAAAACACCCTTCTCTCGGAATAATAGACCCTGAAGTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | GGACAACTTGAAAAAGAGAGACTTCAGGGTCTATTATTCCGAGAGAAGGGTGTTGGGTCGCTCCGGGCATaGTCCTCACAGTATGACATC | + |
Preference number: 4 (lower is better) Translates to: GQLEKERLQGLLFREKGVGSLRA*SSQYDI Trigger: GATGTCATACTGTGAGGAGCATGCCCGGAGCGACCC...AACACCCTTCTCTCGGAATAATAGACCCTGAAGTCTCTCTTTTTCAAGTTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CCA 90 bp | TGGGCTATTTTCACAATTGGAGTAAAAGTGAGGACCCAACTGCTAGACGCTGAAGCTGCACAGTTCTCCTaGCTTGGGCTATGCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: WAIFTIGVKVRTQLLDAEAAQFS*LGLCCW Trigger: CCAACAGCATAGCCCAAGCCAGGAGAACTGTGCAGC...TTCAGCGTCTAGCAGTTGGGTCCTCACTTTTACTCCAATTGTGAAAATAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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CDS-3UTR GCA 90 bp | AAAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATATCCTGGCTTGGGCTATaGTGTTGGTGCTTGCCGTCT | + |
Preference number: 4 (lower is better) Translates to: KDKLPTTPLPFSLYSNPISWLGL*CWCLPS Trigger: AGACGGCAAGCACCAACAGCATAGCCCAAGCCAGGA...TATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
||
CDS-3UTR GCA 90 bp | AAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATATTCCTGGCTTGGGCTATaGTGTTGGTGCTTGCCGTCT | + |
Preference number: 4 (lower is better) Translates to: KTSFPQLPCHFPYTVTQYSWLGL*CWCLPS Trigger: AGACGGCAAGCACCAACAGCATAGCCCAAGCCAGGA...ATATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | GAAGTGATTCTCGACATTTTAATTTGCCGGTGCTTAGACAATGTAGGTCTTGACGGGTCGCTCCGGGCATaGTCCTCACAGTATGACATC | + |
Preference number: 4 (lower is better) Translates to: EVILDILICRCLDNVGLDGSLRA*SSQYDI Trigger: GATGTCATACTGTGAGGAGCATGCCCGGAGCGACCC...GTCAAGACCTACATTGTCTAAGCACCGGCAAATTAAAATGTCGAGAATCACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR CCA 90 bp | GAGAGACTTCAGGGTCTATTATTCCGAGAGAAGGGTGTTTTAGTTACTAGCTGTGCTGCACAGTTCTCCTaGCTTGGGCTATGCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: ERLQGLLFREKGVLVTSCAAQFS*LGLCCW Trigger: CCAACAGCATAGCCCAAGCCAGGAGAACTGTGCAGC...ACAGCTAGTAACTAAAACACCCTTCTCTCGGAATAATAGACCCTGAAGTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | GAAGTGATTCTCGACATTTTAATTTGCCGGTGCTTAGACAATGTAGGTCTTGACTCCTGGCTTGGGCTATaGTGTTGGTGCTTGCCGTCT | + |
Preference number: 4 (lower is better) Translates to: EVILDILICRCLDNVGLDSWLGL*CWCLPS Trigger: AGACGGCAAGCACCAACAGCATAGCCCAAGCCAGGA...GTCAAGACCTACATTGTCTAAGCACCGGCAAATTAAAATGTCGAGAATCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR GCA 90 bp | AAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATATGCTTCCAATCTCAGCTaGTGCACAGTTCTCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: KTSFPQLPCHFPYTVTQYASNLS*CTVLLA Trigger: AGCCAGGAGAACTGTGCAGCAGCTGAGATTGGAAGC...ATATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CCA 90 bp | GAAGTGATTCTCGACATTTTAATTTGCCGGTGCTTAGACAATGTAGGTCTTGACGCTGCACAGTTCTCCTaGCTTGGGCTATGCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: EVILDILICRCLDNVGLDAAQFS*LGLCCW Trigger: CCAACAGCATAGCCCAAGCCAGGAGAACTGTGCAGC...GTCAAGACCTACATTGTCTAAGCACCGGCAAATTAAAATGTCGAGAATCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR CCA 90 bp | GGAAGCCAAGTTGTCAGTGTGGGAAAAACACTCCACATGGGACTTCTGTGCATCCCTTTATTCTTTCGATaGAGGCTTCCAATCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: GSQVVSVGKTLHMGLLCIPLFFR*RLPISA Trigger: AGCTGAGATTGGAAGCCTCCATCGAAAGAATAAAGG...GATGCACAGAAGTCCCATGTGGAGTGTTTTTCCCACACTGACAACTTGGCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043148.13 |
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CDS-3UTR CCA 90 bp | TGGTTACCAGGTAAGCTGAAGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTCCTTTATTCTTTCGATaGAGGCTTCCAATCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: WLPGKLKESLQVAAVVCVPLFFR*RLPISA Trigger: AGCTGAGATTGGAAGCCTCCATCGAAAGAATAAAGG...AACGCAAACCACAGCAGCAACCTGAAGGGATTCCTTCAGCTTACCTGGTAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR TCA 90 bp | GAGAGACTTCAGGGTCTATTATTCCGAGAGAAGGGTGTTTTAGTTACTAGCTGTAGGTCTTCTTATCCTTaGACGGGTTTTCTGAGGTCG | + |
Preference number: 4 (lower is better) Translates to: ERLQGLLFREKGVLVTSCRSSYP*TGFLRS Trigger: CGACCTCAGAAAACCCGTTCAAGGATAAGAAGACCT...ACAGCTAGTAACTAAAACACCCTTCTCTCGGAATAATAGACCCTGAAGTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | CAGCATCAACTCATTATAATGCAGATGATCTTTGCAACGTTCTTTCATTACCTTGGGTCGCTCCGGGCATaGTCCTCACAGTATGACATC | + |
Preference number: 4 (lower is better) Translates to: QHQLIIMQMIFATFFHYLGSLRA*SSQYDI Trigger: GATGTCATACTGTGAGGAGCATGCCCGGAGCGACCC...AAGGTAATGAAAGAACGTTGCAAAGATCATCTGCATTATAATGAGTTGATGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR CCA 90 bp | GAAGTGATTCTCGACATTTTAATTTGCCGGTGCTTAGACAATGTAGGTCTTGACACAGTTCTCCTGGCTTaGGCTATGCTGTTGGTGCTT | + |
Preference number: 4 (lower is better) Translates to: EVILDILICRCLDNVGLDTVLLA*AMLLVL Trigger: AAGCACCAACAGCATAGCCCAAGCCAGGAGAACTGT...GTCAAGACCTACATTGTCTAAGCACCGGCAAATTAAAATGTCGAGAATCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR TCA 90 bp | AAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATATGAGACCTTAACCAAGTaGTCAGAGGAGGACATCTTT | + |
Preference number: 4 (lower is better) Translates to: KTSFPQLPCHFPYTVTQYETLTK*SEEDIF Trigger: AAAGATGTCCTCCTCTGATCACTTGGTTAAGGTCTC...ATATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | CAGCATCAACTCATTATAATGCAGATGATCTTTGCAACGTTCTTTCATTACCTTTCCTGGCTTGGGCTATaGTGTTGGTGCTTGCCGTCT | + |
Preference number: 4 (lower is better) Translates to: QHQLIIMQMIFATFFHYLSWLGL*CWCLPS Trigger: AGACGGCAAGCACCAACAGCATAGCCCAAGCCAGGA...AAGGTAATGAAAGAACGTTGCAAAGATCATCTGCATTATAATGAGTTGATGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR CCA 90 bp | CAAAAATTTCACGGAAATTTACCTACACAGAGTCAGGATAATGATGTAACTCTGGCTGCACAGTTCTCCTaGCTTGGGCTATGCTGTTGG | + |
Preference number: 4 (lower is better) Translates to: QKFHGNLPTQSQDNDVTLAAQFS*LGLCCW Trigger: CCAACAGCATAGCCCAAGCCAGGAGAACTGTGCAGC...CAGAGTTACATCATTATCCTGACTCTGTGTAGGTAAATTTCCGTGAAATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR CCA 90 bp | AGGGGCCAGCACAATTCCAAGAGAGGAGTGAGAACAGCATCAACTCATTATAATCCTTTATTCTTTCGATaGAGGCTTCCAATCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: RGQHNSKRGVRTASTHYNPLFFR*RLPISA Trigger: AGCTGAGATTGGAAGCCTCCATCGAAAGAATAAAGG...ATTATAATGAGTTGATGCTGTTCTCACTCCTCTCTTGGAATTGTGCTGGCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR GCA 90 bp | CAGCATCAACTCATTATAATGCAGATGATCTTTGCAACGTTCTTTCATTACCTTGCTTCCAATCTCAGCTaGTGCACAGTTCTCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: QHQLIIMQMIFATFFHYLASNLS*CTVLLA Trigger: AGCCAGGAGAACTGTGCAGCAGCTGAGATTGGAAGC...AAGGTAATGAAAGAACGTTGCAAAGATCATCTGCATTATAATGAGTTGATGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR CCA 90 bp | GGACAACTTGAAAAAGAGAGACTTCAGGGTCTATTATTCCGAGAGAAGGGTGTTCCTTTATTCTTTCGATaGAGGCTTCCAATCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: GQLEKERLQGLLFREKGVPLFFR*RLPISA Trigger: AGCTGAGATTGGAAGCCTCCATCGAAAGAATAAAGG...AACACCCTTCTCTCGGAATAATAGACCCTGAAGTCTCTCTTTTTCAAGTTGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CCA 90 bp | AAAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATACCTTTATTCTTTCGATaGAGGCTTCCAATCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: KDKLPTTPLPFSLYSNPIPLFFR*RLPISA Trigger: AGCTGAGATTGGAAGCCTCCATCGAAAGAATAAAGG...TATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CCA 90 bp | AAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATATCCTTTATTCTTTCGATaGAGGCTTCCAATCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: KTSFPQLPCHFPYTVTQYPLFFR*RLPISA Trigger: AGCTGAGATTGGAAGCCTCCATCGAAAGAATAAAGG...ATATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR GCA 90 bp | GGACAACTTGAAAAAGAGAGACTTCAGGGTCTATTATTCCGAGAGAAGGGTGTTAGAGGAGGACATCTTTaGCTTTATTCTTTCGATGGA | + |
Preference number: 4 (lower is better) Translates to: GQLEKERLQGLLFREKGVRGGHL*LYSFDG Trigger: TCCATCGAAAGAATAAAGGCAAAGATGTCCTCCTCT...AACACCCTTCTCTCGGAATAATAGACCCTGAAGTCTCTCTTTTTCAAGTTGTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204511.3 |
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CDS-3UTR CCA 90 bp | CAAAAATTTCACGGAAATTTACCTACACAGAGTCAGGATAATGATGTAACTCTGACAGTTCTCCTGGCTTaGGCTATGCTGTTGGTGCTT | + |
Preference number: 4 (lower is better) Translates to: QKFHGNLPTQSQDNDVTLTVLLA*AMLLVL Trigger: AAGCACCAACAGCATAGCCCAAGCCAGGAGAACTGT...CAGAGTTACATCATTATCCTGACTCTGTGTAGGTAAATTTCCGTGAAATTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS-3UTR CAA 90 bp | CCCCCAATCCAGCAGAGATCAAGAGCCCTGGAGTGGAAGCTGCCTCCTGAGGGTCAGGTCTTCTTATCCTaGAACGGGTTTTCTGAGGTC | + |
Preference number: 5 (lower is better) Translates to: PPIQQRSRALEWKLPPEGQVFLS*NGFSEV Trigger: GACCTCAGAAAACCCGTTCAAGGATAAGAAGACCTG...ACCCTCAGGAGGCAGCTTCCACTCCAGGGCTCTTGATCTCTGCTGGATTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043148.13 ENSMUST00000114225.8 |
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CDS-3UTR CAA 90 bp | CCAGGTAAGCTGAAGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGCACAGTTCTCCTGGCTaGGGCTATGCTGTTGGTGCT | + |
Preference number: 5 (lower is better) Translates to: PGKLKESLQVAAVVCVKRHSSPG*GYAVGA Trigger: AGCACCAACAGCATAGCCCAAGCCAGGAGAACTGTG...CCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCTTCAGCTTACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CAA 90 bp | AGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGCAAGGGGCGCTTCCAGGTCTTCTTATCCTaGAACGGGTTTTCTGAGGTC | + |
Preference number: 5 (lower is better) Translates to: RNPFRLLLWFALRGKGRFQVFLS*NGFSEV Trigger: GACCTCAGAAAACCCGTTCAAGGATAAGAAGACCTG...GAAGCGCCCCTTGCCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CAA 90 bp | CCAGGTAAGCTGAAGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTAAGAGGCAGGTCTTCTTATCCTaGAACGGGTTTTCTGAGGTC | + |
Preference number: 5 (lower is better) Translates to: PGKLKESLQVAAVVCVKRQVFLS*NGFSEV Trigger: GACCTCAGAAAACCCGTTCAAGGATAAGAAGACCTG...CCTCTTAACGCAAACCACAGCAGCAACCTGAAGGGATTCCTTCAGCTTACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CAA 90 bp | TGGTTACCAGGTAAGCTGAAGGAATCCCTTCAGGTTGCTGCTGTGGTTTGCGTTCAGGTCTTCTTATCCTaGAACGGGTTTTCTGAGGTC | + |
Preference number: 5 (lower is better) Translates to: WLPGKLKESLQVAAVVCVQVFLS*NGFSEV Trigger: GACCTCAGAAAACCCGTTCAAGGATAAGAAGACCTG...AACGCAAACCACAGCAGCAACCTGAAGGGATTCCTTCAGCTTACCTGGTAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CAA 90 bp | AAAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATACACAGTTCTCCTGGCTaGGGCTATGCTGTTGGTGCT | + |
Preference number: 5 (lower is better) Translates to: KDKLPTTPLPFSLYSNPIHSSPG*GYAVGA Trigger: AGCACCAACAGCATAGCCCAAGCCAGGAGAACTGTG...TATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CAA 90 bp | AAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATATCACAGTTCTCCTGGCTaGGGCTATGCTGTTGGTGCT | + |
Preference number: 5 (lower is better) Translates to: KTSFPQLPCHFPYTVTQYHSSPG*GYAVGA Trigger: AGCACCAACAGCATAGCCCAAGCCAGGAGAACTGTG...ATATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CAA 90 bp | GAAGTGATTCTCGACATTTTAATTTGCCGGTGCTTAGACAATGTAGGTCTTGACCACAGTTCTCCTGGCTaGGGCTATGCTGTTGGTGCT | + |
Preference number: 5 (lower is better) Translates to: EVILDILICRCLDNVGLDHSSPG*GYAVGA Trigger: AGCACCAACAGCATAGCCCAAGCCAGGAGAACTGTG...GTCAAGACCTACATTGTCTAAGCACCGGCAAATTAAAATGTCGAGAATCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS TCA 90 bp | CAGTATGACATCAGGTCTGCTGATGCTTTTGAGACCTTAACCAAGTaGTCAGAGGAGGACATCTTTGCCTTTATTCTTTCGATGGAGGCT | + |
Preference number: 5 (lower is better) Translates to: QYDIRSADAFETLTK*SEEDIFAFILSMEA Trigger: AGCCTCCATCGAAAGAATAAAGGCAAAGATGTCCTCCTCTGATCACTTGGTTAAGGTCTCAAAAGCATCAGCAGACCTGATGTCATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204511.3 |
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CDS-3UTR CAA 90 bp | AAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATATCAGGTCTTCTTATCCTaGAACGGGTTTTCTGAGGTC | + |
Preference number: 5 (lower is better) Translates to: KTSFPQLPCHFPYTVTQYQVFLS*NGFSEV Trigger: GACCTCAGAAAACCCGTTCAAGGATAAGAAGACCTG...ATATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CAA 90 bp | GGACAACTTGAAAAAGAGAGACTTCAGGGTCTATTATTCCGAGAGAAGGGTGTTCAGGTCTTCTTATCCTaGAACGGGTTTTCTGAGGTC | + |
Preference number: 5 (lower is better) Translates to: GQLEKERLQGLLFREKGVQVFLS*NGFSEV Trigger: GACCTCAGAAAACCCGTTCAAGGATAAGAAGACCTG...AACACCCTTCTCTCGGAATAATAGACCCTGAAGTCTCTCTTTTTCAAGTTGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 |
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CDS-3UTR CAA 90 bp | AAAGACAAGCTTCCCACAACTCCCCTGCCATTTTCCTTATACAGTAACCCAATAGGTCTGCTGATGCTTTaGAGACCTTTATTCTTTCGA | + |
Preference number: 5 (lower is better) Translates to: KDKLPTTPLPFSLYSNPIGLLML*RPLFFR Trigger: TCGAAAGAATAAAGGTCTCAAAAGCATCAGCAGACC...TATTGGGTTACTGTATAAGGAAAATGGCAGGGGAGTTGTGGGAAGCTTGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 |
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CDS-3UTR CAA 90 bp | CAAAAATTTCACGGAAATTTACCTACACAGAGTCAGGATAATGATGTAACTCTGCAGGTCTTCTTATCCTaGAACGGGTTTTCTGAGGTC | + |
Preference number: 5 (lower is better) Translates to: QKFHGNLPTQSQDNDVTLQVFLS*NGFSEV Trigger: GACCTCAGAAAACCCGTTCAAGGATAAGAAGACCTG...CAGAGTTACATCATTATCCTGACTCTGTGTAGGTAAATTTCCGTGAAATTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 |
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CDS CCA 72 bp | GCTTCCAATCTCAGCTGCTGCACAGTTCTCCTGGCTTaGGCTATGCTGTTGGTGCTTGCCGTCTTGCTGGAC | + |
Preference number: 6 (lower is better) Translates to: ASNLSCCTVLLA*AMLLVLAVLLD Trigger: GTCCAGCAAGACGGCAAGCACCAACAGCATAGCCCAAGCCAGGAGAACTGTGCAGCAGCTGAGATTGGAAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 ENSMUST00000204862.2 |
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CDS CCA 72 bp | TGGAGGCTTCCAATCTCAGCTGCTGCACAGTTCTCCTaGCTTGGGCTATGCTGTTGGTGCTTGCCGTCTTGC | + |
Preference number: 6 (lower is better) Translates to: WRLPISAAAQFS*LGLCCWCLPSC Trigger: GCAAGACGGCAAGCACCAACAGCATAGCCCAAGCCAGGAGAACTGTGCAGCAGCTGAGATTGGAAGCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 ENSMUST00000204862.2 |
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CDS CAA 72 bp | GGCTTCCAATCTCAGCTGCTGCACAGTTCTCCTGGCTaGGGCTATGCTGTTGGTGCTTGCCGTCTTGCTGGA | + |
Preference number: 6 (lower is better) Translates to: GFQSQLLHSSPG*GYAVGACRLAG Trigger: TCCAGCAAGACGGCAAGCACCAACAGCATAGCCCAAGCCAGGAGAACTGTGCAGCAGCTGAGATTGGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204511.3 ENSMUST00000204862.2 |
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CDS CCA 72 bp | GGTCTGCTGATGCTTTTGAGACCTTTATTCTTTCGATaGAGGCTTCCAATCTCAGCTGCTGCACAGTTCTCC | + |
Preference number: 6 (lower is better) Translates to: GLLMLLRPLFFR*RLPISAAAQFS Trigger: GGAGAACTGTGCAGCAGCTGAGATTGGAAGCCTCCATCGAAAGAATAAAGGTCTCAAAAGCATCAGCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000043148.13 ENSMUST00000114222.4 ENSMUST00000114224.8 ENSMUST00000114225.8 ENSMUST00000114226.8 ENSMUST00000114227.8 ENSMUST00000114228.8 ENSMUST00000204862.2 |
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CDS TCA 72 bp | ATCAGGTCTGCTGATGCTTTTGAGACCTTAACCAAGTaGTCAGAGGAGGACATCTTTGCCTTTATTCTTTCG | + |
Preference number: 6 (lower is better) Translates to: IRSADAFETLTK*SEEDIFAFILS Trigger: CGAAAGAATAAAGGCAAAGATGTCCTCCTCTGATCACTTGGTTAAGGTCTCAAAAGCATCAGCAGACCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204511.3 |