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Pregenerated sensors for GNG11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032766

Ensembl transcript IDs: ENSMUST00000031670.10

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGAAAGTGGGGGAGCCATGCCTTCATTCCATAACTGCAATCAGATaGTCTCCTCTGAGAGAGAGTGTGTGGGGAGCCAAGGTGAGAAGC +
Preference number: 1 (lower is better)
Translates to: LKVGEPCLHSITAIR*SPLRESVWGAKVRS
Trigger: GCTTCTCACCTTGGCTCCCCACACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATGGAATGAAGGCATGGCTCCCCCACTTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR CCA 90 bp CATTCCATAACTGCAATCAGATGCTCTCCTCTGAGAGAGAGTGTGTaGGGAGCCAAGGTGAGAAGCAGGTATGATTCACACCCCAACTGC +
Preference number: 1 (lower is better)
Translates to: HSITAIRCSPLRESV*GAKVRSRYDSHPNC
Trigger: GCAGTTGGGGTGTGAATCATACCTGCTTCTCACCTTGGCTCCCCACACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR TCA 90 bp TCCTCTGAGAGAGAGTGTGTGGGGAGCCAAGGTGAGAAGCAGGTATaGTTCACACCCCAACTGCTTGGAGAGTGCTTATATGACAGTCTT +
Preference number: 1 (lower is better)
Translates to: SSERECVGSQGEKQV*FTPQLLGECLYDSL
Trigger: AAGACTGTCATATAAGCACTCTCCAAGCAGTTGGGGTGTGAATCATACCTGCTTCTCACCTTGGCTCCCCACACACTCTCTCTCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR GCA 90 bp AAGGAGTATACTGAAAGTGGGGGAGCCATGCCTTCATTCCATAACTaGAATCAGATGCTCTCCTCTGAGAGAGAGTGTGTGGGGAGCCAA +
Preference number: 1 (lower is better)
Translates to: KEYTESGGAMPSFHN*NQMLSSERECVGSQ
Trigger: TTGGCTCCCCACACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATGGAATGAAGGCATGGCTCCCCCACTTTCAGTATACTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR GCA 90 bp ACTTTATTGGAGACAGCAAGGAGTATACTGAAAGTGGGGGAGCCATaGCTTCATTCCATAACTGCAATCAGATGCTCTCCTCTGAGAGAG +
Preference number: 1 (lower is better)
Translates to: TLLETARSILKVGEP*LHSITAIRCSPLRE
Trigger: CTCTCTCAGAGGAGAGCATCTGATTGCAGTTATGGAATGAAGGCATGGCTCCCCCACTTTCAGTATACTCCTTGCTGTCTCCAATAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR-3UTR CCA 90 bp ACTTTATTGGAGACAGCAAGGAGTATACTGAAAGTGGGGGAGCCATGCCTTCATCTGAGAGAGAGTGTGTaGGGAGCCAAGGTGAGAAGC +
Preference number: 2 (lower is better)
Translates to: TLLETARSILKVGEPCLHLRESV*GAKVRS
Trigger: GCTTCTCACCTTGGCTCCCCACACACTCTCTCTCAG...ATGAAGGCATGGCTCCCCCACTTTCAGTATACTCCTTGCTGTCTCCAATAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR-3UTR CCA 90 bp GCCATGCCTTCATTCCATAACTGCAATCAGATGCTCTCCTCTGAGAGAGAGTGTCTTCAACACACACTTTaGCTTCATTTGGGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: AMPSFHNCNQMLSSERECLQHTL*LHLGEN
Trigger: ATTTTCCCCCAAATGAAGCCAAAGTGTGTGTTGAAG...ACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATGGAATGAAGGCATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR-3UTR TCA 90 bp GCCATGCCTTCATTCCATAACTGCAATCAGATGCTCTCCTCTGAGAGAGAGTGTTGGAGAGTGCTTATATaGCAGTCTTTTTCTCGATTT +
Preference number: 2 (lower is better)
Translates to: AMPSFHNCNQMLSSERECWRVLI*QSFSRF
Trigger: AAATCGAGAAAAAGACTGTCATATAAGCACTCTCCA...ACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATGGAATGAAGGCATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR GCA 72 bp GGGGAGCCATGCCTTCATTCCATAACTGCAATCAGATaGTCTCCTCTGAGAGAGAGTGTGTGGGGAGCCAAG +
Preference number: 3 (lower is better)
Translates to: GEPCLHSITAIR*SPLRESVWGAK
Trigger: CTTGGCTCCCCACACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATGGAATGAAGGCATGGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR-3UTR CAA 90 bp CATAACTGCAATCAGATGCTCTCCTCTGAGAGAGAGTGTGTGGGGAGCCAAGGTTCACACCCCAACTGCTaGGAGAGTGCTTATATGACA +
Preference number: 3 (lower is better)
Translates to: HNCNQMLSSERECVGSQGSHPNC*ESAYMT
Trigger: TGTCATATAAGCACTCTCCAAGCAGTTGGGGTGTGA...ACCTTGGCTCCCCACACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR TCA 72 bp AGAGAGTGTGTGGGGAGCCAAGGTGAGAAGCAGGTATaGTTCACACCCCAACTGCTTGGAGAGTGCTTATAT +
Preference number: 3 (lower is better)
Translates to: RECVGSQGEKQV*FTPQLLGECLY
Trigger: ATATAAGCACTCTCCAAGCAGTTGGGGTGTGAATCATACCTGCTTCTCACCTTGGCTCCCCACACACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR GCA 72 bp GAGACAGCAAGGAGTATACTGAAAGTGGGGGAGCCATaGCTTCATTCCATAACTGCAATCAGATGCTCTCCT +
Preference number: 3 (lower is better)
Translates to: ETARSILKVGEP*LHSITAIRCSP
Trigger: AGGAGAGCATCTGATTGCAGTTATGGAATGAAGGCATGGCTCCCCCACTTTCAGTATACTCCTTGCTGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR-3UTR CAA 90 bp TCATTCCATAACTGCAATCAGATGCTCTCCTCTGAGAGAGAGTGTGTGGGGAGCTCTTCAACACACACTTaGGCTTCATTTGGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: SFHNCNQMLSSERECVGSSSTHT*ASFGGK
Trigger: TTTTCCCCCAAATGAAGCCAAAGTGTGTGTTGAAGA...GCTCCCCACACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATGGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
3UTR GCA 72 bp GCCAAGGTGAGAAGCAGGTATGATTCACACCCCAACTaGTTGGAGAGTGCTTATATGACAGTCTTTTTCTCG +
Preference number: 3 (lower is better)
Translates to: AKVRSRYDSHPN*LESAYMTVFFS
Trigger: CGAGAAAAAGACTGTCATATAAGCACTCTCCAAGCAGTTGGGGTGTGAATCATACCTGCTTCTCACCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
CDS-3UTR TCA 90 bp AGAGAGAGTGTGTGGGGAGCCAAGGTGAGAAGCAGGTATGATTCACACCCCAACGTTGTCTCTGCAACTTaGCTTCTTTGCGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RESVWGAKVRSRYDSHPNVVSAT*LLCEVA
Trigger: AGCAACTTCGCAAAGAAGTCAAGTTGCAGAGACAAC...GTTGGGGTGTGAATCATACCTGCTTCTCACCTTGGCTCCCCACACACTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
CDS-3UTR TCA 90 bp CATAACTGCAATCAGATGCTCTCCTCTGAGAGAGAGTGTGTGGGGAGCCAAGGTAGCTGCCCTTTTCTTTaGAGGGATTCTTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: HNCNQMLSSERECVGSQGSCPFL*RDSCLL
Trigger: CAGAAGACAAGAATCCCTTCAAAGAAAAGGGCAGCT...ACCTTGGCTCCCCACACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
CDS-3UTR GCA 90 bp ATTGGAGACAGCAAGGAGTATACTGAAAGTGGGGGAGCCATGCCTTCATTCCATACTTCTTTGCGAAGTTaGTCAACCTCCATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: IGDSKEYTESGGAMPSFHTSLRS*STSIFS
Trigger: ACTGAAGATGGAGGTTGAGCAACTTCGCAAAGAAGT...ATGGAATGAAGGCATGGCTCCCCCACTTTCAGTATACTCCTTGCTGTCTCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
CDS-3UTR GCA 90 bp ATTGGAGACAGCAAGGAGTATACTGAAAGTGGGGGAGCCATGCCTTCATTCCATGATACCTGTTGTCTCTaGAACTTGACTTCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: IGDSKEYTESGGAMPSFHDTCCL*NLTSLR
Trigger: TCGCAAAGAAGTCAAGTTGCAGAGACAACAGGTATC...ATGGAATGAAGGCATGGCTCCCCCACTTTCAGTATACTCCTTGCTGTCTCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
CDS-3UTR CAA 90 bp TCATTCCATAACTGCAATCAGATGCTCTCCTCTGAGAGAGAGTGTGTGGGGAGCGACTTCTTTGCGAAGTaGCTCAACCTCCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: SFHNCNQMLSSERECVGSDFFAK*LNLHLQ
Trigger: CTGAAGATGGAGGTTGAGCAACTTCGCAAAGAAGTC...GCTCCCCACACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
CDS-3UTR CAA 90 bp ATTGGAGACAGCAAGGAGTATACTGAAAGTGGGGGAGCCATGCCTTCATTCCATTGTTGTCTCTGCAACTaGACTTCTTTGCGAAGTTGC +
Preference number: 5 (lower is better)
Translates to: IGDSKEYTESGGAMPSFHCCLCN*TSLRSC
Trigger: GCAACTTCGCAAAGAAGTCAAGTTGCAGAGACAACA...ATGGAATGAAGGCATGGCTCCCCCACTTTCAGTATACTCCTTGCTGTCTCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
CDS-3UTR CAA 90 bp GCCATGCCTTCATTCCATAACTGCAATCAGATGCTCTCCTCTGAGAGAGAGTGTACATTTAGATACCTGTaGTCTCTGCAACTTGACTTC +
Preference number: 5 (lower is better)
Translates to: AMPSFHNCNQMLSSERECTFRYL*SLQLDF
Trigger: GAAGTCAAGTTGCAGAGACAACAGGTATCTAAATGT...ACACTCTCTCTCAGAGGAGAGCATCTGATTGCAGTTATGGAATGAAGGCATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
CDS CAA 90 bp ACATTTAGATACCTGTTGTCTCTGCAACTTGACTTCTTTGCGAAGTaGCTCAACCTCCATCTTCAGTTTTTCCTTTTCCGGCAGATCCTC +
Preference number: 6 (lower is better)
Translates to: TFRYLLSLQLDFFAK*LNLHLQFFLFRQIL
Trigger: GAGGATCTGCCGGAAAAGGAAAAACTGAAGATGGAGGTTGAGCAACTTCGCAAAGAAGTCAAGTTGCAGAGACAACAGGTATCTAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
CDS CAA 90 bp TCCTCAGAACATTTAGATACCTGTTGTCTCTGCAACTTGACTTCTTaGCGAAGTTGCTCAACCTCCATCTTCAGTTTTTCCTTTTCCGGC +
Preference number: 6 (lower is better)
Translates to: SSEHLDTCCLCNLTS*RSCSTSIFSFSFSG
Trigger: GCCGGAAAAGGAAAAACTGAAGATGGAGGTTGAGCAACTTCGCAAAGAAGTCAAGTTGCAGAGACAACAGGTATCTAAATGTTCTGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10
CDS CAA 72 bp CATTTAGATACCTGTTGTCTCTGCAACTTGACTTCTTaGCGAAGTTGCTCAACCTCCATCTTCAGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: HLDTCCLCNLTS*RSCSTSIFSFS
Trigger: GGAAAAACTGAAGATGGAGGTTGAGCAACTTCGCAAAGAAGTCAAGTTGCAGAGACAACAGGTATCTAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031670.10