Pregenerated sensors for GNB4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027669Ensembl transcript IDs: ENSMUST00000108234.8, ENSMUST00000155737.8, ENSMUST00000184130.7, ENSMUST00000193050.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACACCTGACCGGCCTCCTTTCAGAGCGTCCCACACACTGCAGTTaGAGTCGTCATAGCCGGCTAACAGGAGGCGCCCACTCTTTGAGA | + |
|
Preference number: 1 (lower is better) Translates to: GHLTGLLSERPTHCS*SRHSRLTGGAHSLR Trigger: TCTCAAAGAGTGGGCGCCTCCTGTTAGCCGGCTATGACGACTTCAACTGCAGTGTGTGGGACGCTCTGAAAGGAGGCCGGTCAGGTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR TCA 90 bp | GCCATGCCGTCATCAGTCACACCTAAGCAGCTAACACGGTTGTCATaGCCAGCAAGGACACCTGACCGGCCTCCTTTCAGAGCGTCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: AMPSSVTPKQLTRLS*PARTPDRPPFRASH Trigger: GTGGGACGCTCTGAAAGGAGGCCGGTCAGGTGTCCTTGCTGGTCATGACAACCGTGTTAGCTGCTTAGGTGTGACTGATGACGGCATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR GCA 90 bp | GAGAGGCTCATCACGTCACCCGAGTGTCCCGTGAAGGTCGTAGTCTaGTGTCCGGTCTCAATGTCCCACAAAGCACAAGTCGTGTCTCCC | + |
|
Preference number: 1 (lower is better) Translates to: ERLITSPECPVKVVV*CPVSMSHKAQVVSP Trigger: GGGAGACACGACTTGTGCTTTGTGGGACATTGAGACCGGACAGCAGACTACGACCTTCACGGGACACTCGGGTGACGTGATGAGCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR TCA 90 bp | TGGGTGAGGAAGTCAGATATCCTGGGACTGAAGCAACAGACAGTTTaGGCTGCCATGTGGATGCTGGGACTCAAATCCAGGTCTTCTACA | + |
|
Preference number: 1 (lower is better) Translates to: WVRKSDILGLKQQTV*AAMWMLGLKSRSST Trigger: TGTAGAAGACCTGGATTTGAGTCCCAGCATCCACATGGCAGCTCAAACTGTCTGTTGCTTCAGTCCCAGGATATCTGACTTCCTCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 90 bp | GGCAAAGGCATATCCACTCGGGAAGAAACTGACAGCGTTGATGTCTaGGATGTGTCCGGTGAAAGACTGTCTACACATCCCATCTCGGAT | + |
|
Preference number: 1 (lower is better) Translates to: GKGISTREETDSVDV*DVSGERLSTHPISD Trigger: ATCCGAGATGGGATGTGTAGACAGTCTTTCACCGGACACATCTCAGACATCAACGCTGTCAGTTTCTTCCCGAGTGGATATGCCTTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR GCA 90 bp | GAGGAAGTCAGATATCCTGGGACTGAAGCAACAGACAGTTTGAGCTaGCATGTGGATGCTGGGACTCAAATCCAGGTCTTCTACAAGAGT | + |
|
Preference number: 1 (lower is better) Translates to: EEVRYPGTEATDSLS*HVDAGTQIQVFYKS Trigger: ACTCTTGTAGAAGACCTGGATTTGAGTCCCAGCATCCACATGGCAGCTCAAACTGTCTGTTGCTTCAGTCCCAGGATATCTGACTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 90 bp | ATAACAGTCTGTTACTGTCAATCATTTGAATCTACAGGAGAGAACTaGAGAGGAGAGCTGTCTGTTCCGTTAGGAGGCGGGACATCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: ITVCYCQSFESTGEN*RGELSVPLGGGTSQ Trigger: CTGGGATGTCCCGCCTCCTAACGGAACAGACAGCTCTCCTCTTCAGTTCTCTCCTGTAGATTCAAATGATTGACAGTAACAGACTGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 90 bp | TATACAACAGCACTGCCTCTTTGTGCTTCTCCATGGAATAAACTCTaGGTTTCTGGGTGCTGGTTTCTCCATCAATGTCCAGTCTACCCA | + |
|
Preference number: 1 (lower is better) Translates to: YTTALPLCASPWNKL*VSGCWFLHQCPVYP Trigger: TGGGTAGACTGGACATTGATGGAGAAACCAGCACCCAGAAACTCAGAGTTTATTCCATGGAGAAGCACAAAGAGGCAGTGCTGTTGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR GCA 90 bp | CTTAGTCACCTAACCACGAAGCAGTCAGGGACTTTCAGATTAAAATaGAATGTCACAGTCCAAGGGGACCTCCTTCAGACAGCACATAAT | + |
|
Preference number: 1 (lower is better) Translates to: LSHLTTKQSGTFRLK*NVTVQGDLLQTAHN Trigger: ATTATGTGCTGTCTGAAGGAGGTCCCCTTGGACTGTGACATTGCATTTTAATCTGAAAGTCCCTGACTGCTTCGTGGTTAGGTGACTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR GCA 90 bp | TTTACTCAACCAAATGGTGGTCACATTGCTTTAGGAGAGAACTTGTaGCTTTACAGTACTACAGTATTCTTGGCAGAGTGGCACACTGGC | + |
|
Preference number: 1 (lower is better) Translates to: FTQPNGGHIALGENL*LYSTTVFLAEWHTG Trigger: GCCAGTGTGCCACTCTGCCAAGAATACTGTAGTACTGTAAAGGCACAAGTTCTCTCCTAAAGCAATGTGACCACCATTTGGTTGAGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 90 bp | GTGCCAGTTGAATGGATGAGTTTACATTTCTCAAATGTTAGAAGGTaGGACACTGTTTCCTCCCATTACAGAGAACACCAGGCAAGTGTC | + |
|
Preference number: 1 (lower is better) Translates to: VPVEWMSLHFSNVRR*DTVSSHYREHQASV Trigger: GACACTTGCCTGGTGTTCTCTGTAATGGGAGGAAACAGTGTCTCACCTTCTAACATTTGAGAAATGTAAACTCATCCATTCAACTGGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR GCA 90 bp | GGCTTTTACATTTCTAACTGGCTAAGATGTCATTTTACAACAGTATaGTTTCCACAGTGGCCAGAGAATCAGCACCCGAACACAGTATGT | + |
|
Preference number: 1 (lower is better) Translates to: GFYISNWLRCHFTTV*FPQWPENQHPNTVC Trigger: ACATACTGTGTTCGGGTGCTGATTCTCTGGCCACTGTGGAAAGCATACTGTTGTAAAATGACATCTTAGCCAGTTAGAAATGTAAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR GCA 90 bp | CTTCCCACTGTATTAAGATCAATTGATTTTCATAAACAAAAGGGATaGTGGTCTGATCACAGCTGTTATGTACATGGGCACATTCACAGT | + |
|
Preference number: 1 (lower is better) Translates to: LPTVLRSIDFHKQKG*WSDHSCYVHGHIHS Trigger: ACTGTGAATGTGCCCATGTACATAACAGCTGTGATCAGACCAGCATCCCTTTTGTTTATGAAAATCAATTGATCTTAATACAGTGGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CCA 90 bp | CCCACTGTATTAAGATCAATTGATTTTCATAAACAAAAGGGATGCTaGTCTGATCACAGCTGTTATGTACATGGGCACATTCACAGTACA | + |
|
Preference number: 1 (lower is better) Translates to: PTVLRSIDFHKQKGC*SDHSCYVHGHIHST Trigger: TGTACTGTGAATGTGCCCATGTACATAACAGCTGTGATCAGACCAGCATCCCTTTTGTTTATGAAAATCAATTGATCTTAATACAGTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCATGACCAGCAAGGACACCTGACCGGCCTCCTTTCAGAGCGTCCCACACACGGTGGCCGCGCAGCGTaGGCCTTGTTCGCATTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: CHDQQGHLTGLLSERPTHGGRAA*ALFAFV Trigger: TACAAATGCGAACAAGGCGCACGCTGCGCGGCCACC...GTGTGTGGGACGCTCTGAAAGGAGGCCGGTCAGGTGTCCTTGCTGGTCATGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR CAA 90 bp | ACACCCTTCTGGGGATGCTCAGGATCCTCTCATGCGCCTCAGCTCTaGGCTGGGGTGGGCAGGCAGCAGATACAACCCAGCGATAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: TPFWGCSGSSHAPQL*AGVGRQQIQPSDRT Trigger: AGTTCTATCGCTGGGTTGTATCTGCTGCCTGCCCACCCCAGCCAAGAGCTGAGGCGCATGAGAGGATCCTGAGCATCCCCAGAAGGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTGGCACACTGGCATCTGCCTGTAGACCAAGCTAGAGGCCAGGGCAGGAGTACTTCTTGTCAGCAGTaGCGCTGTGTGCAGTTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: RVAHWHLPVDQARGQGRSTSCQQ*RCVQLA Trigger: GGCTAACTGCACACAGCGCCACTGCTGACAAGAAGT...ACTCCTGCCCTGGCCTCTAGCTTGGTCTACAGGCAGATGCCAGTGTGCCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGCATCACAAGCACCAGACACAAAGGTCTTCAAGTCAGGACTCAGTGAGAGGGTAGCCCGTGTGTCCTaGCAATTCTCGGCTCACCCG | + |
|
Preference number: 2 (lower is better) Translates to: DASQAPDTKVFKSGLSERVARVS*QFSAHP Trigger: CGGGTGAGCCGAGAATTGCCAGGACACACGGGCTAC...CCTCTCACTGAGTCCTGACTTGAAGACCTTTGTGTCTGGTGCTTGTGATGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR CAA 90 bp | GTGGGTGAGGAAGTCAGATATCCTGGGACTGAAGCAACAGACAGTTaGAGCTGCCATGTGGATGCTGGGACTCAAATCCAGGTCTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: VGEEVRYPGTEATDS*SCHVDAGTQIQVFY Trigger: GTAGAAGACCTGGATTTGAGTCCCAGCATCCACATGGCAGCTCAAACTGTCTGTTGCTTCAGTCCCAGGATATCTGACTTCCTCACCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTGGCACACTGGCATCTGCCTGTAGACCAAGCTAGAGGCCAGGGCAGGAGTAGTGTATGGATGTTTTaGCTGCATGTATGTATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: RVAHWHLPVDQARGQGRSSVWMF*LHVCMW Trigger: CCACATACATACATGCAGGCAAAACATCCATACACT...ACTCCTGCCCTGGCCTCTAGCTTGGTCTACAGGCAGATGCCAGTGTGCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGACGAGCTGGCCTCAGCTCTGCACTGTGTTAGCCTCCCAGGTGAAGGATAACAGGACAACTTTTGTCTaGTGTTATGCATCAACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LTSWPQLCTVLASQVKDNRTTFV*CYASTC Trigger: GCAGGTTGATGCATAACATCAGACAAAAGTTGTCCT...GTTATCCTTCACCTGGGAGGCTAACACAGTGCAGAGCTGAGGCCAGCTCGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGACGAGCTGGCCTCAGCTCTGCACTGTGTTAGCCTCCCAGGTGAAGGATAACTGTATACAACAGCACTaGCTCTTTGTGCTTCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LTSWPQLCTVLASQVKDNCIQQH*LFVLLH Trigger: ATGGAGAAGCACAAAGAGGCAGTGCTGTTGTATACA...GTTATCCTTCACCTGGGAGGCTAACACAGTGCAGAGCTGAGGCCAGCTCGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGGATGCTGGGACTCAAATCCAGGTCTTCTACAAGAGTGACACCTGTTTTTAGCTCTTGGCTGGGGTaGGCAGGCAGCAGATACAAC | + |
|
Preference number: 2 (lower is better) Translates to: MWMLGLKSRSSTRVTPVFSSWLG*AGSRYN Trigger: GTTGTATCTGCTGCCTGCCCACCCCAGCCAAGAGCT...AAAAACAGGTGTCACTCTTGTAGAAGACCTGGATTTGAGTCCCAGCATCCACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGGATGCTGGGACTCAAATCCAGGTCTTCTACAAGAGTGACACCTGTTTTTACACCCTTCTGGGGATaGTCAGGATCCTCTCATGCG | + |
|
Preference number: 2 (lower is better) Translates to: MWMLGLKSRSSTRVTPVFTPFWG*SGSSHA Trigger: CGCATGAGAGGATCCTGAGCATCCCCAGAAGGGTGT...AAAAACAGGTGTCACTCTTGTAGAAGACCTGGATTTGAGTCCCAGCATCCACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCACGGTCATCATGGTTTCTCTCCAGATACATATTAAGGGAAACCTTCAAGTTCTGAACCCAGGGCCTTaGGTTGCAAGCACTCTACCC | + |
|
Preference number: 2 (lower is better) Translates to: ATVIMVSLQIHIKGNLQVLNPGP*VASTLP Trigger: GGGTAGAGTGCTTGCAACGCAAGGCCCTGGGTTCAG...AACTTGAAGGTTTCCCTTAATATGTATCTGGAGAGAAACCATGATGACCGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | TACCTCATAGAGAAATACTCAGTCAGGCTTAAAGGCACACTTGAGGTGTGGGCTCTATGTGGGTACAGGTaGCTGAGGAGGGCTTTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: YLIEKYSVRLKGTLEVWALCGYR*LRRALD Trigger: ATCCAAAGCCCTCCTCAGGCACCTGTACCCACATAG...AGCCCACACCTCAAGTGTGCCTTTAAGCCTGACTGAGTATTTCTCTATGAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTCAGGACCACCTCACCTCTTAGTCACCTAACCACGAAGCAGTCAGGGACTTCTACAGAAAAACAATaGGCACAAGCAAGAATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SLRTTSPLSHLTTKQSGTSTEKQ*AQARIC Trigger: ACAGATTCTTGCTTGTGCTCATTGTTTTTCTGTAGA...AGTCCCTGACTGCTTCGTGGTTAGGTGACTAAGAGGTGAGGTGGTCCTGAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGAGGAAGTCAGATATCCTGGGACTGAAGCAACAGACAGTTTGAGCTGCCATTACCCTATGTCAAAGTaGAATCTTTACCCCTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GEEVRYPGTEATDSLSCHYPMSK*NLYPWP Trigger: AGGCCAGGGGTAAAGATTTCACTTTGACATAGGGTA...ATGGCAGCTCAAACTGTCTGTTGCTTCAGTCCCAGGATATCTGACTTCCTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR TCA 90 bp | CATAATGCTACATTGTTACACCTGCTTTACAAAACCAGCTATTTAGTTTGGGGGGTGGGTACAGGTGCCTaGGGAGGGCTTTGGATCCCT | + |
|
Preference number: 2 (lower is better) Translates to: HNATLLHLLYKTSYLVWGVGTGA*GGLWIP Trigger: AGGGATCCAAAGCCCTCCTCAGGCACCTGTACCCAC...CCCCCAAACTAAATAGCTGGTTTTGTAAAGCAGGTGTAACAATGTAGCATTATG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGACGAGCTGGCCTCAGCTCTGCACTGTGTTAGCCTCCCAGGTGAAGGATAACTTCTCCAGGTATCATTaGAGAACAGAAAATATGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTSWPQLCTVLASQVKDNFSRYH*RTENMA Trigger: TGCCATATTTTCTGTTCTCCAATGATACCTGGAGAA...GTTATCCTTCACCTGGGAGGCTAACACAGTGCAGAGCTGAGGCCAGCTCGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTCTTCAAGTCAGGACTCAGTGAGAGGCTCATCACGTCACCCGAGTGTCCCTTCTCCAGGTATCATTaGAGAACAGAAAATATGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KVFKSGLSERLITSPECPFSRYH*RTENMA Trigger: TGCCATATTTTCTGTTCTCCAATGATACCTGGAGAA...GGGACACTCGGGTGACGTGATGAGCCTCTCACTGAGTCCTGACTTGAAGACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCCAGATGCAGAGACAAGTCAGGTTTTTGTCAGACTTCTCAAATACTAGTTGCATGAACAGCCACTaGGTCCCTCAGGACCACCTC | + |
|
Preference number: 2 (lower is better) Translates to: CLQMQRQVRFLSDFSNTSCMNSH*VPQDHL Trigger: GAGGTGGTCCTGAGGGACCCAGTGGCTGTTCATGCA...ACTAGTATTTGAGAAGTCTGACAAAAACCTGACTTGTCTCTGCATCTGGAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCCCATTACAGAGAACACCAGGCAAGTGTCTCCAGATGCAGAGACAAGTCAAACAGCAAGGTCCAATaGTTCAAATGGCTGAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSHYREHQASVSRCRDKSNSKVQ*FKWLSF Trigger: GAAGCTCAGCCATTTGAACCATTGGACCTTGCTGTT...TGACTTGTCTCTGCATCTGGAGACACTTGCCTGGTGTTCTCTGTAATGGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | TACCTCATAGAGAAATACTCAGTCAGGCTTAAAGGCACACTTGAGGTGTGGGCTCTGCCATGTGGATGCTaGGACTCAAATCCAGGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: YLIEKYSVRLKGTLEVWALPCGC*DSNPGL Trigger: AAGACCTGGATTTGAGTCCCAGCATCCACATGGCAG...AGCCCACACCTCAAGTGTGCCTTTAAGCCTGACTGAGTATTTCTCTATGAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGTGGATGCTGGGACTCAAATCCAGGTCTTCTACAAGAGTGACACCTGTTTTTCTAAACCTGTCTCCTTaGTCCAGCAGTATACCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: MWMLGLKSRSSTRVTPVFLNLSP*SSSIPR Trigger: CCGAGGTATACTGCTGGATCAAGGAGACAGGTTTAG...AAAAACAGGTGTCACTCTTGTAGAAGACCTGGATTTGAGTCCCAGCATCCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CAA 90 bp | TTTAAACTATGTGGGTACAGGTGCCTGAGGAGGGCTTTGGATCCCTaGAAGTTAAAGGCAGTTGTTAGCCACCTGAAATGGGAACTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FKLCGYRCLRRALDP*KLKAVVSHLKWELN Trigger: GTTTAGTTCCCATTTCAGGTGGCTAACAACTGCCTTTAACTTCAAGGGATCCAAAGCCCTCCTCAGGCACCTGTACCCACATAGTTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CAA 90 bp | AGGATTCTTTTTAAACTATGTGGGTACAGGTGCCTGAGGAGGGCTTaGGATCCCTTGAAGTTAAAGGCAGTTGTTAGCCACCTGAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: RILFKLCGYRCLRRA*DPLKLKAVVSHLKW Trigger: CCATTTCAGGTGGCTAACAACTGCCTTTAACTTCAAGGGATCCAAAGCCCTCCTCAGGCACCTGTACCCACATAGTTTAAAAAGAATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCATTACAGAGAACACCAGGCAAGTGTCTCCAGATGCAGAGACAAGTCAGGTTACTTTCAGATTAAAATaGAATGTCACAGTCCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PITENTRQVSPDAETSQVTFRLK*NVTVQG Trigger: CCCTTGGACTGTGACATTGCATTTTAATCTGAAAGT...AACCTGACTTGTCTCTGCATCTGGAGACACTTGCCTGGTGTTCTCTGTAATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCACGGTCATCATGGTTTCTCTCCAGATACATATTAAGGGAAACCTTCAAGTTTTACAGCCTGAGGATTaGTTCCCTACATATGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: ATVIMVSLQIHIKGNLQVLQPED*FPTYGD Trigger: GTCCCCATATGTAGGGAAGCAATCCTCAGGCTGTAA...AACTTGAAGGTTTCCCTTAATATGTATCTGGAGAGAAACCATGATGACCGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGCATCACAAGCACCAGACACAAAGGTCTTCAAGTCAGGACTCAGTGAGAGGATTAATTTTCCATCTTaGGAAGCACTGACTAGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: DASQAPDTKVFKSGLSERINFPS*EALTSS Trigger: GCTACTAGTCAGTGCTTCGCAAGATGGAAAATTAAT...CCTCTCACTGAGTCCTGACTTGAAGACCTTTGTGTCTGGTGCTTGTGATGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR CAA 90 bp | GTGTTTACTCAACCAAATGGTGGTCACATTGCTTTAGGAGAGAACTaGTGCCTTTACAGTACTACAGTATTCTTGGCAGAGTGGCACACT | + |
|
Preference number: 2 (lower is better) Translates to: VFTQPNGGHIALGEN*CLYSTTVFLAEWHT Trigger: AGTGTGCCACTCTGCCAAGAATACTGTAGTACTGTAAAGGCACAAGTTCTCTCCTAAAGCAATGTGACCACCATTTGGTTGAGTAAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCCCATTACAGAGAACACCAGGCAAGTGTCTCCAGATGCAGAGACAAGTCACAGCTTATTGAACGCTaGTTTTTATATATAGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: SSHYREHQASVSRCRDKSQLIER*FLYIVT Trigger: GGTGACTATATATAAAAAGCAGCGTTCAATAAGCTG...TGACTTGTCTCTGCATCTGGAGACACTTGCCTGGTGTTCTCTGTAATGGGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGTCACAGCAAAAATGTTACAAATCTTGCCAATCTGAAGGACAACTTTTGTGAGCTGCCATGTGGATaGTGGGACTCAAATCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RSHSKNVTNLANLKDNFCELPCG*WDSNPG Trigger: ACCTGGATTTGAGTCCCAGCATCCACATGGCAGCTC...ACAAAAGTTGTCCTTCAGATTGGCAAGATTTGTAACATTTTTGCTGTGACTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGCAAGTGTCTCCAGATGCAGAGACAAGTCAGGTTTTTGTCAGACTTCTCATTCTCCAGGTATCATTaGAGAACAGAAAATATGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PGKCLQMQRQVRFLSDFSFSRYH*RTENMA Trigger: TGCCATATTTTCTGTTCTCCAATGATACCTGGAGAA...TGAGAAGTCTGACAAAAACCTGACTTGTCTCTGCATCTGGAGACACTTGCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | TACCTCATAGAGAAATACTCAGTCAGGCTTAAAGGCACACTTGAGGTGTGGGCTAAACAAAAGGGATGCTaGTCTGATCACAGCTGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: YLIEKYSVRLKGTLEVWAKQKGC*SDHSCY Trigger: ATAACAGCTGTGATCAGACCAGCATCCCTTTTGTTT...AGCCCACACCTCAAGTGTGCCTTTAAGCCTGACTGAGTATTTCTCTATGAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCACGGTCATCATGGTTTCTCTCCAGATACATATTAAGGGAAACCTTCAAGTTTTGCTTCCCTACATATaGGGACTGCTCTTGAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ATVIMVSLQIHIKGNLQVLLPYI*GLLLKR Trigger: TCTCTTCAAGAGCAGTCCCCATATGTAGGGAAGCAA...AACTTGAAGGTTTCCCTTAATATGTATCTGGAGAGAAACCATGATGACCGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CAA 90 bp | TTAAGCTTTAGGCATGGCTGGCATTCAGTCAGTTGGCTTCATGTGTaGGAACTTATTTTAGGAGGAGAAAAATGCCTCCAAGATACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSFRHGWHSVSWLHV*ELILGGEKCLQDTS Trigger: TGAGGTATCTTGGAGGCATTTTTCTCCTCCTAAAATAAGTTCCAACACATGAAGCCAACTGACTGAATGCCAGCCATGCCTAAAGCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGGGACTTTCAGATTAAAATGCAATGTCACAGTCCAAGGGGACCTCCTTCATCTACAGAAAAACAATaGGCACAAGCAAGAATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VRDFQIKMQCHSPRGPPSSTEKQ*AQARIC Trigger: ACAGATTCTTGCTTGTGCTCATTGTTTTTCTGTAGA...TGAAGGAGGTCCCCTTGGACTGTGACATTGCATTTTAATCTGAAAGTCCCTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTCCAGATGCAGAGACAAGTCAGGTTTTTGTCAGACTTCTCAAATACTAGTTACCCTATGTCAAAGTaGAATCTTTACCCCTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: CLQMQRQVRFLSDFSNTSYPMSK*NLYPWP Trigger: AGGCCAGGGGTAAAGATTTCACTTTGACATAGGGTA...ACTAGTATTTGAGAAGTCTGACAAAAACCTGACTTGTCTCTGCATCTGGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR TCA 90 bp | GACGTTCATATCCAGATAATTTCCCTGGATGGTTTCACTTCTGAAATGATGTCTCAGATATCCTGGGACTaGAGCAACAGACAGTTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DVHIQIISLDGFTSEMMSQISWD*SNRQFE Trigger: CTCAAACTGTCTGTTGCTTCAGTCCCAGGATATCTG...AGACATCATTTCAGAAGTGAAACCATCCAGGGAAATTATCTGGATATGAACGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | TACCTCATAGAGAAATACTCAGTCAGGCTTAAAGGCACACTTGAGGTGTGGGCTACTTTCAGATTAAAATaGAATGTCACAGTCCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: YLIEKYSVRLKGTLEVWATFRLK*NVTVQG Trigger: CCCTTGGACTGTGACATTGCATTTTAATCTGAAAGT...AGCCCACACCTCAAGTGTGCCTTTAAGCCTGACTGAGTATTTCTCTATGAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGGATGCTGGGACTCAAATCCAGGTCTTCTACAAGAGTGACACCTGTTTTTGTCCAATGGTTCAAATaGCTGAGCTTCTTAAAATAC | + |
|
Preference number: 2 (lower is better) Translates to: MWMLGLKSRSSTRVTPVFVQWFK*LSFLKY Trigger: GTATTTTAAGAAGCTCAGCCATTTGAACCATTGGAC...AAAAACAGGTGTCACTCTTGTAGAAGACCTGGATTTGAGTCCCAGCATCCACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CAA 90 bp | AGAACACCAGGCAAGTGTCTCCAGATGCAGAGACAAGTCAGGTTTTaGTCAGACTTCTCAAATACTAGTACTTTCTACAAACTTCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: RTPGKCLQMQRQVRF*SDFSNTSTFYKLHF Trigger: GAAATGAAGTTTGTAGAAAGTACTAGTATTTGAGAAGTCTGACAAAAACCTGACTTGTCTCTGCATCTGGAGACACTTGCCTGGTGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR TCA 90 bp | CATAATGCTACATTGTTACACCTGCTTTACAAAACCAGCTATTTAGTTTGGGGGTGTACAAGCCTCGTGTaGTGTGCAGATTCTAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: HNATLLHLLYKTSYLVWGCTSLV*CADSKS Trigger: ACTTTTAGAATCTGCACATCACACGAGGCTTGTACA...CCCCCAAACTAAATAGCTGGTTTTGTAAAGCAGGTGTAACAATGTAGCATTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTCAGATTAAAATGCAATGTCACAGTCCAAGGGGACCTCCTTCAGACAGCACAGCTTATTGAACGCTaGTTTTTATATATAGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: TFRLKCNVTVQGDLLQTAQLIER*FLYIVT Trigger: GGTGACTATATATAAAAAGCAGCGTTCAATAAGCTG...TGCTGTCTGAAGGAGGTCCCCTTGGACTGTGACATTGCATTTTAATCTGAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTCAGATTAAAATGCAATGTCACAGTCCAAGGGGACCTCCTTCAGACAGCAAATGGCAAACACAAATaGTTGTCTGCTATAAAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TFRLKCNVTVQGDLLQTANGKHK*LSAIKC Trigger: ACACTTTATAGCAGACAACCATTTGTGTTTGCCATT...TGCTGTCTGAAGGAGGTCCCCTTGGACTGTGACATTGCATTTTAATCTGAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR CAA 90 bp | CATGGGCACATTCACAGTACAAGGATGAAAACTCACAGGTTCAGTTaGGAAGTATTAAGGTTACAGTTACAGGTGATCAACTTTAACACA | + |
|
Preference number: 2 (lower is better) Translates to: HGHIHSTRMKTHRFS*EVLRLQLQVINFNT Trigger: TGTGTTAAAGTTGATCACCTGTAACTGTAACCTTAATACTTCCAAACTGAACCTGTGAGTTTTCATCCTTGTACTGTGAATGTGCCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CCA 90 bp | TCACAGCAAAAATGTTACAAATCTTGCCAATCTGAAGGACAACTTTTGTCTGATTTTGTGCCAGTTGAATaGATGAGTTTACATTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SQQKCYKSCQSEGQLLSDFVPVE*MSLHFS Trigger: TGAGAAATGTAAACTCATCCATTCAACTGGCACAAA...ATCAGACAAAAGTTGTCCTTCAGATTGGCAAGATTTGTAACATTTTTGCTGTGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CCA 72 bp | GGGGATGCTCAGGATCCTCTCATGCGCCTCAGCTCTTaGCTGGGGTGGGCAGGCAGCAGATACAACCCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: GDAQDPLMRLSS*LGWAGSRYNPA Trigger: CGCTGGGTTGTATCTGCTGCCTGCCCACCCCAGCCAAGAGCTGAGGCGCATGAGAGGATCCTGAGCATCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR GCA 72 bp | AGACACACCCTTCTGGGGATGCTCAGGATCCTCTCATaGGCCTCAGCTCTTGGCTGGGGTGGGCAGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RHTLLGMLRILS*ASALGWGGQAA Trigger: TGCTGCCTGCCCACCCCAGCCAAGAGCTGAGGCGCATGAGAGGATCCTGAGCATCCCCAGAAGGGTGTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 72 bp | ACCGGCCTCCTTTCAGAGCGTCCCACACACTGCAGTTaGAGTCGTCATAGCCGGCTAACAGGAGGCGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TGLLSERPTHCS*SRHSRLTGGAH Trigger: GTGGGCGCCTCCTGTTAGCCGGCTATGACGACTTCAACTGCAGTGTGTGGGACGCTCTGAAAGGAGGCCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR CCA 72 bp | CAGGATCCTCTCATGCGCCTCAGCTCTTGGCTGGGGTaGGCAGGCAGCAGATACAACCCAGCGATAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: QDPLMRLSSWLG*AGSRYNPAIEL Trigger: AAGTTCTATCGCTGGGTTGTATCTGCTGCCTGCCCACCCCAGCCAAGAGCTGAGGCGCATGAGAGGATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCTGCACGGAGGTCAAAGAGTCGGCATGTGGCATCATCAGAACCAGTGGCAAGCGCCTTGTTCGCATTaGTATTCGGCCCACGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GLHGGQRVGMWHHQNQWQAPCSH*YSAHGV Trigger: GACTCCGTGGGCCGAATACAAATGCGAACAAGGCGC...TTGCCACTGGTTCTGATGATGCCACATGCCGACTCTTTGACCTCCGTGCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTCATGACCAGCAAGGACACCTGACCGGCCTCCTTTCAGAGCGTCCCACACACGGATATCCCACAGCTTaGAGGATGCATCACAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CHDQQGHLTGLLSERPTHGYPTA*RMHHKH Trigger: GTGCTTGTGATGCATCCTCAAAGCTGTGGGATATCC...GTGTGTGGGACGCTCTGAAAGGAGGCCGGTCAGGTGTCCTTGCTGGTCATGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR GCA 72 bp | ATCACGTCACCCGAGTGTCCCGTGAAGGTCGTAGTCTaGTGTCCGGTCTCAATGTCCCACAAAGCACAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: ITSPECPVKVVV*CPVSMSHKAQV Trigger: GACTTGTGCTTTGTGGGACATTGAGACCGGACAGCAGACTACGACCTTCACGGGACACTCGGGTGACGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR TCA 72 bp | GACTATACACACATACACACACACAGAGCTAGGGACTaGACCCAGGGCCTTGCGTTGCAAGCACTCTACCCC | + |
|
Preference number: 3 (lower is better) Translates to: DYTHIHTHRARD*TQGLALQALYP Trigger: GGGGTAGAGTGCTTGCAACGCAAGGCCCTGGGTTCAGTCCCTAGCTCTGTGTGTGTGTATGTGTGTATAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 72 bp | AGCACCAGACACAAAGGTCTTCAAGTCAGGACTCAGTaGGAGGCTCATCACGTCACCCGAGTGTCCCGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: STRHKGLQVRTQ*EAHHVTRVSRE Trigger: TTCACGGGACACTCGGGTGACGTGATGAGCCTCTCACTGAGTCCTGACTTGAAGACCTTTGTGTCTGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR TCA 72 bp | TCATCAGTCACACCTAAGCAGCTAACACGGTTGTCATaGCCAGCAAGGACACCTGACCGGCCTCCTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSVTPKQLTRLS*PARTPDRPPFR Trigger: TCTGAAAGGAGGCCGGTCAGGTGTCCTTGCTGGTCATGACAACCGTGTTAGCTGCTTAGGTGTGACTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR CCA 72 bp | GGCAGGCAGCAGATACAACCCAGCGATAGAACTTTCTaGGCAGAGGTACAAGGAAGGCTAGACTTCATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRQQIQPSDRTF*AEVQGRLDFIQ Trigger: CTGAATGAAGTCTAGCCTTCCTTGTACCTCTGCCCAGAAAGTTCTATCGCTGGGTTGTATCTGCTGCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CCA 72 bp | GACACCAACCATGAGAAAGCAACTTCTTGTCAGCAGTaGCGCTGTGTGCAGTTAGCCACGGTCATCATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: DTNHEKATSCQQ*RCVQLATVIMV Trigger: AACCATGATGACCGTGGCTAACTGCACACAGCGCCACTGCTGACAAGAAGTTGCTTTCTCATGGTTGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGACGAGCTGGCCTCAGCTCTGCACTGTGTTAGCCTCCCAGGTGAAGGATAACAAAGGGAGCTTAATCTaGATTGTTTCTCTGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: LTSWPQLCTVLASQVKDNKGSLI*IVSLTT Trigger: GGTGGTCAGAGAAACAATCAAGATTAAGCTCCCTTT...GTTATCCTTCACCTGGGAGGCTAACACAGTGCAGAGCTGAGGCCAGCTCGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 72 bp | AAGTCAGATATCCTGGGACTGAAGCAACAGACAGTTTaGGCTGCCATGTGGATGCTGGGACTCAAATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSDILGLKQQTV*AAMWMLGLKSR Trigger: CCTGGATTTGAGTCCCAGCATCCACATGGCAGCTCAAACTGTCTGTTGCTTCAGTCCCAGGATATCTGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR GCA 72 bp | AGATATCCTGGGACTGAAGCAACAGACAGTTTGAGCTaGCATGTGGATGCTGGGACTCAAATCCAGGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RYPGTEATDSLS*HVDAGTQIQVF Trigger: GAAGACCTGGATTTGAGTCCCAGCATCCACATGGCAGCTCAAACTGTCTGTTGCTTCAGTCCCAGGATATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR GCA 72 bp | TGCCTTCAGCGAGACAAGGATACTCAAGAGCACAATTaGATAAAGACAGAAAAGGACGGGACACCCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CLQRDKDTQEHN*IKTEKDGTPCC Trigger: GCAGCAGGGTGTCCCGTCCTTTTCTGTCTTTATGCAATTGTGCTCTTGAGTATCCTTGTCTCGCTGAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 72 bp | ATATCCACTCGGGAAGAAACTGACAGCGTTGATGTCTaGGATGTGTCCGGTGAAAGACTGTCTACACATCCC | + |
|
Preference number: 3 (lower is better) Translates to: ISTREETDSVDV*DVSGERLSTHP Trigger: GGGATGTGTAGACAGTCTTTCACCGGACACATCTCAGACATCAACGCTGTCAGTTTCTTCCCGAGTGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR CCA 72 bp | AAATACTCAGTCAGGCTTAAAGGCACACTTGAGGTGTaGGCTATCAGTGCCTTCAGCGAGACAAGGATACTC | + |
|
Preference number: 3 (lower is better) Translates to: KYSVRLKGTLEV*AISAFSETRIL Trigger: GAGTATCCTTGTCTCGCTGAAGGCACTGATAGCCCACACCTCAAGTGTGCCTTTAAGCCTGACTGAGTATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CAA 90 bp | TACCTCATAGAGAAATACTCAGTCAGGCTTAAAGGCACACTTGAGGTGTGGGCTGAGATAGTGATGTCTTaGCTGAGCAGCATTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YLIEKYSVRLKGTLEVWAEIVMS*LSSILG Trigger: CCCCAAAATGCTGCTCAGCAAAGACATCACTATCTC...AGCCCACACCTCAAGTGTGCCTTTAAGCCTGACTGAGTATTTCTCTATGAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGGTGAAAGACTGTCTACACATCCCATCTCGGATATCCCACAGCTTTGAGGATTGGCGTGCATCTTATTaGTCGTATAGCTATCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PVKDCLHIPSRISHSFEDWRASY*SYSYPK Trigger: TTTGGGATAGCTATACGACAAATAAGATGCACGCCA...ATCCTCAAAGCTGTGGGATATCCGAGATGGGATGTGTAGACAGTCTTTCACCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR TCA 72 bp | GGATGCTGGGACTCAAATCCAGGTCTTCTACAAGAGTaGCACCTGTTTTTAACTGCTGATCCATCTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GCWDSNPGLLQE*HLFLTADPSLQ Trigger: CTGGAGAGATGGATCAGCAGTTAAAAACAGGTGTCACTCTTGTAGAAGACCTGGATTTGAGTCCCAGCATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR GCA 72 bp | CTAACCACGAAGCAGTCAGGGACTTTCAGATTAAAATaGAATGTCACAGTCCAAGGGGACCTCCTTCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LTTKQSGTFRLK*NVTVQGDLLQT Trigger: TGTCTGAAGGAGGTCCCCTTGGACTGTGACATTGCATTTTAATCTGAAAGTCCCTGACTGCTTCGTGGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGAGGAAGTCAGATATCCTGGGACTGAAGCAACAGACAGTTTGAGCTGCCATTTTCTCCAGGTATCATaGGAGAACAGAAAATATGGC | + |
|
Preference number: 3 (lower is better) Translates to: GEEVRYPGTEATDSLSCHFLQVS*ENRKYG Trigger: GCCATATTTTCTGTTCTCCAATGATACCTGGAGAAA...ATGGCAGCTCAAACTGTCTGTTGCTTCAGTCCCAGGATATCTGACTTCCTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 72 bp | AAGCAAGAATCTGTTCAAGTCAAGACGACCACTCAATaGATACCCTGGCCTTTGACCACAGAAAGGGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KQESVQVKTTTQ*IPWPLTTEREL Trigger: AAGCTCCCTTTCTGTGGTCAAAGGCCAGGGTATTCATTGAGTGGTCGTCTTGACTTGAACAGATTCTTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR TCA 72 bp | TCGTGTGATGTGCAGATTCTAAAAGTATGTTCCCTATaGAATGATGACAGGCAGGCCTATCTGGGGGATTGC | + |
|
Preference number: 3 (lower is better) Translates to: SCDVQILKVCSL*NDDRQAYLGDC Trigger: GCAATCCCCCAGATAGGCCTGCCTGTCATCATTTCATAGGGAACATACTTTTAGAATCTGCACATCACACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR GCA 72 bp | TCCCATTACAGAGAACACCAGGCAAGTGTCTCCAGATaGAGAGACAAGTCAGGTTTTTGTCAGACTTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SHYREHQASVSR*RDKSGFCQTSQ Trigger: TTGAGAAGTCTGACAAAAACCTGACTTGTCTCTGCATCTGGAGACACTTGCCTGGTGTTCTCTGTAATGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR GCA 72 bp | CCAAATGGTGGTCACATTGCTTTAGGAGAGAACTTGTaGCTTTACAGTACTACAGTATTCTTGGCAGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PNGGHIALGENL*LYSTTVFLAEW Trigger: CCACTCTGCCAAGAATACTGTAGTACTGTAAAGGCACAAGTTCTCTCCTAAAGCAATGTGACCACCATTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGGGACTTTCAGATTAAAATGCAATGTCACAGTCCAAGGGGACCTCCTTCATTTCTCCAGGTATCATaGGAGAACAGAAAATATGGC | + |
|
Preference number: 3 (lower is better) Translates to: VRDFQIKMQCHSPRGPPSFLQVS*ENRKYG Trigger: GCCATATTTTCTGTTCTCCAATGATACCTGGAGAAA...TGAAGGAGGTCCCCTTGGACTGTGACATTGCATTTTAATCTGAAAGTCCCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR TCA 72 bp | CCAGCAAGACATAACAGTCTGTTACTGTCAATCATTTaGATCTACAGGAGAGAACTGAAGAGGAGAGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PARHNSLLLSII*IYRRELKRRAV Trigger: GACAGCTCTCCTCTTCAGTTCTCTCCTGTAGATTCAAATGATTGACAGTAACAGACTGTTATGTCTTGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR GCA 72 bp | ATTTCTAACTGGCTAAGATGTCATTTTACAACAGTATaGTTTCCACAGTGGCCAGAGAATCAGCACCCGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ISNWLRCHFTTV*FPQWPENQHPN Trigger: GTTCGGGTGCTGATTCTCTGGCCACTGTGGAAAGCATACTGTTGTAAAATGACATCTTAGCCAGTTAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 72 bp | GCTCTTGAAGTGACAGGCCCCAACACTTTGCTTTCATaGGTTTGTAATACAGTACATGTGTGTCATGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: ALEVTGPNTLLS*VCNTVHVCHDL Trigger: TAAGTCATGACACACATGTACTGTATTACAAACTCATGAAAGCAAAGTGTTGGGGCCTGTCACTTCAAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAAAGCACAAGTCGTGTCTCCCGAACTTGTAATGATTTGTCCATCATCTAAGTTTCTCCAGGTATCATaGGAGAACAGAAAATATGGC | + |
|
Preference number: 3 (lower is better) Translates to: HKAQVVSPELVMICPSSKFLQVS*ENRKYG Trigger: GCCATATTTTCTGTTCTCCAATGATACCTGGAGAAA...CTTAGATGATGGACAAATCATTACAAGTTCGGGAGACACGACTTGTGCTTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGGATGCTGGGACTCAAATCCAGGTCTTCTACAAGAGTGACACCTGTTTTTGTTACTGTCAATCATTaGAATCTACAGGAGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: MWMLGLKSRSSTRVTPVFVTVNH*NLQERT Trigger: AGTTCTCTCCTGTAGATTCAAATGATTGACAGTAAC...AAAAACAGGTGTCACTCTTGTAGAAGACCTGGATTTGAGTCCCAGCATCCACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAATGAGCACAAGCAAGAATCTGTTCAAGTCAAGACGACCACTCAATGAAAAAGGGAGCTTAATCTaGATTGTTTCTCTGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: KTMSTSKNLFKSRRPLNEKGSLI*IVSLTT Trigger: GGTGGTCAGAGAAACAATCAAGATTAAGCTCCCTTT...TTCATTGAGTGGTCGTCTTGACTTGAACAGATTCTTGCTTGTGCTCATTGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR-3UTR CAA 90 bp | GACGTTCATATCCAGATAATTTCCCTGGATGGTTTCACTTCTGAAATGATGTCTGATAACAAGCATGCATaGCCACACCTATCTTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: DVHIQIISLDGFTSEMMSDNKHA*PHLSSF Trigger: AAATGAAGATAGGTGTGGCAATGCATGCTTGTTATC...AGACATCATTTCAGAAGTGAAACCATCCAGGGAAATTATCTGGATATGAACGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR TCA 72 bp | CGAACACAGTATGTAAGTATTTGTACAAGCCTCGTGTaGTGTGCAGATTCTAAAAGTATGTTCCCTATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RTQYVSICTSLV*CADSKSMFPMK Trigger: TTTCATAGGGAACATACTTTTAGAATCTGCACATCACACGAGGCTTGTACAAATACTTACATACTGTGTTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR GCA 72 bp | AAATGGCAAACACAAATGGTTGTCTGCTATAAAGTGTaGACTCTAATCTACAGAAAAACAATGAGCACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KWQTQMVVCYKV*TLIYRKTMSTS Trigger: GCTTGTGCTCATTGTTTTTCTGTAGATTAGAGTGCACACTTTATAGCAGACAACCATTTGTGTTTGCCATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR GCA 72 bp | GTATTAAGATCAATTGATTTTCATAAACAAAAGGGATaGTGGTCTGATCACAGCTGTTATGTACATGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VLRSIDFHKQKG*WSDHSCYVHGH Trigger: GTGCCCATGTACATAACAGCTGTGATCAGACCAGCATCCCTTTTGTTTATGAAAATCAATTGATCTTAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CCA 72 bp | TTAAGATCAATTGATTTTCATAAACAAAAGGGATGCTaGTCTGATCACAGCTGTTATGTACATGGGCACATT | + |
|
Preference number: 3 (lower is better) Translates to: LRSIDFHKQKGC*SDHSCYVHGHI Trigger: AATGTGCCCATGTACATAACAGCTGTGATCAGACCAGCATCCCTTTTGTTTATGAAAATCAATTGATCTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CCA 72 bp | TTCATTTCAGAAGGCAAAATTAACAGCAAGGTCCAATaGTTCAAATGGCTGAGCTTCTTAAAATACCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FISEGKINSKVQ*FKWLSFLKYQK Trigger: TTTTTGGTATTTTAAGAAGCTCAGCCATTTGAACCATTGGACCTTGCTGTTAATTTTGCCTTCTGAAATGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR CAA 72 bp | TGGGGATGCTCAGGATCCTCTCATGCGCCTCAGCTCTaGGCTGGGGTGGGCAGGCAGCAGATACAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WGCSGSSHAPQL*AGVGRQQIQPS Trigger: GCTGGGTTGTATCTGCTGCCTGCCCACCCCAGCCAAGAGCTGAGGCGCATGAGAGGATCCTGAGCATCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR GCA 90 bp | GCAGATGTTATCCAAGCCTCCACAGGCAACGTAGTTCCCGGACGGGGCGTAGGCAGCTGTTCAGCCTCCTaGCTCAGCTGCTCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ADVIQASTGNVVPGRGVGSCSAS*LSCSSS Trigger: CGAGCTGGAGCAGCTGAGGCAGGAGGCTGAACAGCT...GCCTACGCCCCGTCCGGGAACTACGTTGCCTGTGGAGGCTTGGATAACATCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184130.7 ENSMUST00000193050.2 |
||
| CDS-3UTR GCA 90 bp | TGTCATGACCAGCAAGGACACCTGACCGGCCTCCTTTCAGAGCGTCCCACACACAGCTGTTCAGCCTCCTaGCTCAGCTGCTCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CHDQQGHLTGLLSERPTHSCSAS*LSCSSS Trigger: CGAGCTGGAGCAGCTGAGGCAGGAGGCTGAACAGCT...GTGTGTGGGACGCTCTGAAAGGAGGCCGGTCAGGTGTCCTTGCTGGTCATGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| CDS-3UTR GCA 90 bp | AGATGTTATCCAAGCCTCCACAGGCAACGTAGTTCCCGGACGGGGCGTAGGCACGGTGGCCGCGCAGCGTaGGCCTTGTTCGCATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RCYPSLHRQRSSRTGRRHGGRAA*ALFAFV Trigger: TACAAATGCGAACAAGGCGCACGCTGCGCGGCCACC...GTGCCTACGCCCCGTCCGGGAACTACGTTGCCTGTGGAGGCTTGGATAACATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193050.2 |
||
| CDS-3UTR GCA 90 bp | TTGACGAGCTGGCCTCAGCTCTGCACTGTGTTAGCCTCCCAGGTGAAGGATAACGGTGGCCGCGCAGCGTaGGCCTTGTTCGCATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTSWPQLCTVLASQVKDNGGRAA*ALFAFV Trigger: TACAAATGCGAACAAGGCGCACGCTGCGCGGCCACC...GTTATCCTTCACCTGGGAGGCTAACACAGTGCAGAGCTGAGGCCAGCTCGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATGTTATCCAAGCCTCCACAGGCAACGTAGTTCCCGGACGGGGCGTAGGCGGGATGGCGTGCATCTaGAATCATATCCCCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADVIQASTGNVVPGRGVGGMACI*NHIPSA Trigger: TGCACTGGGGATATGATTCCAGATGCACGCCATCCC...GCCTACGCCCCGTCCGGGAACTACGTTGCCTGTGGAGGCTTGGATAACATCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193050.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTCAGGACCACCTCACCTCTTAGTCACCTAACCACGAAGCAGTCAGGGACTGAGGCGCCCACTCTTTaGGAAGGCCACAGAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRTTSPLSHLTTKQSGTEAPTL*EGHRSN Trigger: ATTACTTCTGTGGCCTTCTCAAAGAGTGGGCGCCTC...AGTCCCTGACTGCTTCGTGGTTAGGTGACTAAGAGGTGAGGTGGTCCTGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCCATTACAGAGAACACCAGGCAAGTGTCTCCAGATGCAGAGACAAGTCAACCAGCAAGGACACCTaGCCGGCCTCCTTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSHYREHQASVSRCRDKSTSKDT*PASFQS Trigger: GCTCTGAAAGGAGGCCGGTCAGGTGTCCTTGCTGGT...TGACTTGTCTCTGCATCTGGAGACACTTGCCTGGTGTTCTCTGTAATGGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR TCA 90 bp | GGTACAAGGAAGGCTAGACTTCATTCAGCACCGTCAGGTTTTCTTTTCGTGCCCACCAGCAAGGACACCTaGCCGGCCTCCTTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTRKARLHSAPSGFLFVPTSKDT*PASFQS Trigger: GCTCTGAAAGGAGGCCGGTCAGGTGTCCTTGCTGGT...GGGCACGAAAAGAAAACCTGACGGTGCTGAATGAAGTCTAGCCTTCCTTGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR TCA 90 bp | ATGCATCACAAGCACCAGACACAAAGGTCTTCAAGTCAGGACTCAGTGAGAGGCGTACAATGGGGCCGGTaGGCAGGTGTCTTTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MHHKHQTQRSSSQDSVRGVQWGR*AGVFWS Trigger: ACTCCAAAAGACACCTGCTCACCGGCCCCATTGTAC...GCCTCTCACTGAGTCCTGACTTGAAGACCTTTGTGTCTGGTGCTTGTGATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| CDS-3UTR GCA 90 bp | GGTGAGGAAGTCAGATATCCTGGGACTGAAGCAACAGACAGTTTGAGCTGCCATCAGTGGCCACAGCCATaGCGTCATCAGTCACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: GEEVRYPGTEATDSLSCHQWPQP*RHQSHL Trigger: TAGGTGTGACTGATGACGGCATGGCTGTGGCCACTG...ATGGCAGCTCAAACTGTCTGTTGCTTCAGTCCCAGGATATCTGACTTCCTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR TCA 90 bp | CCCATTACAGAGAACACCAGGCAAGTGTCTCCAGATGCAGAGACAAGTCAGGTTCTAACACGGTTGTCATaGCCAGCAAGGACACCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PITENTRQVSPDAETSQVLTRLS*PARTPD Trigger: GTCAGGTGTCCTTGCTGGTCATGACAACCGTGTTAG...AACCTGACTTGTCTCTGCATCTGGAGACACTTGCCTGGTGTTCTCTGTAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGGATGCTGGGACTCAAATCCAGGTCTTCTACAAGAGTGACACCTGTTTTTAGCTGTTCAGCCTCCTaGCTCAGCTGCTCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: MWMLGLKSRSSTRVTPVFSCSAS*LSCSSS Trigger: CGAGCTGGAGCAGCTGAGGCAGGAGGCTGAACAGCT...AAAAACAGGTGTCACTCTTGTAGAAGACCTGGATTTGAGTCCCAGCATCCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CAA 72 bp | TGTGGGTACAGGTGCCTGAGGAGGGCTTTGGATCCCTaGAAGTTAAAGGCAGTTGTTAGCCACCTGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CGYRCLRRALDP*KLKAVVSHLKW Trigger: CCATTTCAGGTGGCTAACAACTGCCTTTAACTTCAAGGGATCCAAAGCCCTCCTCAGGCACCTGTACCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR TCA 90 bp | GGTACAAGGAAGGCTAGACTTCATTCAGCACCGTCAGGTTTTCTTTTCGTGCCCGATATCCCACAGCTTTaGGGATGCATCACAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GTRKARLHSAPSGFLFVPDIPQL*GCITST Trigger: GGTGCTTGTGATGCATCCTCAAAGCTGTGGGATATC...GGGCACGAAAAGAAAACCTGACGGTGCTGAATGAAGTCTAGCCTTCCTTGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CAA 72 bp | GAAGTCAGATATCCTGGGACTGAAGCAACAGACAGTTaGAGCTGCCATGTGGATGCTGGGACTCAAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVRYPGTEATDS*SCHVDAGTQIQ Trigger: CTGGATTTGAGTCCCAGCATCCACATGGCAGCTCAAACTGTCTGTTGCTTCAGTCCCAGGATATCTGACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CAA 72 bp | GTGCCTTCAGCGAGACAAGGATACTCAAGAGCACAATaGCATAAAGACAGAAAAGGACGGGACACCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPSARQGYSRAQ*HKDRKGRDTLL Trigger: CAGCAGGGTGTCCCGTCCTTTTCTGTCTTTATGCAATTGTGCTCTTGAGTATCCTTGTCTCGCTGAAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTCAGATTAAAATGCAATGTCACAGTCCAAGGGGACCTCCTTCAGACAGCACAGTGGCCACAGCCATaGCGTCATCAGTCACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: TFRLKCNVTVQGDLLQTAQWPQP*RHQSHL Trigger: TAGGTGTGACTGATGACGGCATGGCTGTGGCCACTG...TGCTGTCTGAAGGAGGTCCCCTTGGACTGTGACATTGCATTTTAATCTGAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR CAA 72 bp | GCAAAGGCATATCCACTCGGGAAGAAACTGACAGCGTaGATGTCTGAGATGTGTCCGGTGAAAGACTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AKAYPLGKKLTA*MSEMCPVKDCL Trigger: TAGACAGTCTTTCACCGGACACATCTCAGACATCAACGCTGTCAGTTTCTTCCCGAGTGGATATGCCTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| CDS-3UTR TCA 90 bp | GTCAGGGACTTTCAGATTAAAATGCAATGTCACAGTCCAAGGGGACCTCCTTCAGATATCCCACAGCTTTaGGGATGCATCACAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VRDFQIKMQCHSPRGPPSDIPQL*GCITST Trigger: GGTGCTTGTGATGCATCCTCAAAGCTGTGGGATATC...TGAAGGAGGTCCCCTTGGACTGTGACATTGCATTTTAATCTGAAAGTCCCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGGGACTTTCAGATTAAAATGCAATGTCACAGTCCAAGGGGACCTCCTTCACTGAGATGTGTCCGGTaGAAGACTGTCTACACATCC | + |
|
Preference number: 4 (lower is better) Translates to: VRDFQIKMQCHSPRGPPSLRCVR*KTVYTS Trigger: GGATGTGTAGACAGTCTTTCACCGGACACATCTCAG...TGAAGGAGGTCCCCTTGGACTGTGACATTGCATTTTAATCTGAAAGTCCCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTTCATTTCAGAAGGCAAAATTAACAGCAAGGTCCAATGGTTCAAATGGCAGCTGTTCAGCCTCCTaGCTCAGCTGCTCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QTSFQKAKLTARSNGSNGSCSAS*LSCSSS Trigger: CGAGCTGGAGCAGCTGAGGCAGGAGGCTGAACAGCT...GCCATTTGAACCATTGGACCTTGCTGTTAATTTTGCCTTCTGAAATGAAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR CCA 90 bp | AAATGGCAAACACAAATGGTTGTCTGCTATAAAGTGTGCACTCTAATCTACAGAGTAGCCCGTGTGTCCTaGCAATTCTCGGCTCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: KWQTQMVVCYKVCTLIYRVARVS*QFSAHP Trigger: CGGGTGAGCCGAGAATTGCCAGGACACACGGGCTAC...TCTGTAGATTAGAGTGCACACTTTATAGCAGACAACCATTTGTGTTTGCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR CCA 90 bp | GTACTTTCTACAAACTTCATTTCAGAAGGCAAAATTAACAGCAAGGTCCAATGGGTAGCCCGTGTGTCCTaGCAATTCTCGGCTCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLSTNFISEGKINSKVQWVARVS*QFSAHP Trigger: CGGGTGAGCCGAGAATTGCCAGGACACACGGGCTAC...CCATTGGACCTTGCTGTTAATTTTGCCTTCTGAAATGAAGTTTGTAGAAAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR CAA 72 bp | TTGCTTCCCTACATATGGGGACTGCTCTTGAAGAGATaGGCTAAACCTGTCTCCTTGATCCAGCAGTATACC | + |
|
Preference number: 4 (lower is better) Translates to: LLPYIWGLLLKR*AKPVSLIQQYT Trigger: GGTATACTGCTGGATCAAGGAGACAGGTTTAGCCAATCTCTTCAAGAGCAGTCCCCATATGTAGGGAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTACAAACTTCATTTCAGAAGGCAAAATTAACAGCAAGGTCCAATGGTTCAGGTGGCCGCGCAGCGTaGGCCTTGTTCGCATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLQTSFQKAKLTARSNGSGGRAA*ALFAFV Trigger: TACAAATGCGAACAAGGCGCACGCTGCGCGGCCACC...TGAACCATTGGACCTTGCTGTTAATTTTGCCTTCTGAAATGAAGTTTGTAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR TCA 90 bp | GACGTTCATATCCAGATAATTTCCCTGGATGGTTTCACTTCTGAAATGATGTCTCTAACACGGTTGTCATaGCCAGCAAGGACACCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DVHIQIISLDGFTSEMMSLTRLS*PARTPD Trigger: GTCAGGTGTCCTTGCTGGTCATGACAACCGTGTTAG...AGACATCATTTCAGAAGTGAAACCATCCAGGGAAATTATCTGGATATGAACGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTACAAACTTCATTTCAGAAGGCAAAATTAACAGCAAGGTCCAATGGTTCACCAGCGTGGCATCATTaGAGGCCTTCCGAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLQTSFQKAKLTARSNGSPAWHH*RPSEHP Trigger: AGGATGCTCGGAAGGCCTGCAATGATGCCACGCTGG...TGAACCATTGGACCTTGCTGTTAATTTTGCCTTCTGAAATGAAGTTTGTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR CAA 72 bp | AGGCATGGCTGGCATTCAGTCAGTTGGCTTCATGTGTaGGAACTTATTTTAGGAGGAGAAAAATGCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RHGWHSVSWLHV*ELILGGEKCLQ Trigger: TTGGAGGCATTTTTCTCCTCCTAAAATAAGTTCCAACACATGAAGCCAACTGACTGAATGCCAGCCATGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR TCA 90 bp | CAAACTTCATTTCAGAAGGCAAAATTAACAGCAAGGTCCAATGGTTCAAATGGCCTGAGATGTGTCCGGTaGAAGACTGTCTACACATCC | + |
|
Preference number: 4 (lower is better) Translates to: QTSFQKAKLTARSNGSNGLRCVR*KTVYTS Trigger: GGATGTGTAGACAGTCTTTCACCGGACACATCTCAG...GCCATTTGAACCATTGGACCTTGCTGTTAATTTTGCCTTCTGAAATGAAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR CAA 72 bp | CAACCAAATGGTGGTCACATTGCTTTAGGAGAGAACTaGTGCCTTTACAGTACTACAGTATTCTTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPNGGHIALGEN*CLYSTTVFLAE Trigger: CTCTGCCAAGAATACTGTAGTACTGTAAAGGCACAAGTTCTCTCCTAAAGCAATGTGACCACCATTTGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| 3UTR CAA 72 bp | TTAAGGGAGATAGTGATGTCTTTGCTGAGCAGCATTTaGGGGTGTTTACTCAACCAAATGGTGGTCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LREIVMSLLSSI*GCLLNQMVVTL Trigger: CAATGTGACCACCATTTGGTTGAGTAAACACCCCAAAATGCTGCTCAGCAAAGACATCACTATCTCCCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCACAGCTATAGGCTGTAACACGGATTTCTCCAGGTATCATTGGAGAACAATTAATTTTCCATCTTaGGAAGCACTGACTAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLTAIGCNTDFSRYHWRTINFPS*EALTSS Trigger: GCTACTAGTCAGTGCTTCGCAAGATGGAAAATTAAT...TGTTCTCCAATGATACCTGGAGAAATCCGTGTTACAGCCTATAGCTGTGAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| 3UTR CAA 72 bp | GGCAAGTGTCTCCAGATGCAGAGACAAGTCAGGTTTTaGTCAGACTTCTCAAATACTAGTACTTTCTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKCLQMQRQVRF*SDFSNTSTFYK Trigger: TTTGTAGAAAGTACTAGTATTTGAGAAGTCTGACAAAAACCTGACTTGTCTCTGCATCTGGAGACACTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR GCA 90 bp | CACCATTTATGTCACAACAGTTTCAATAAACTACAGCTTATTGAACGCTGCTTTATTAATTTTCCATCTTaGGAAGCACTGACTAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HHLCHNSFNKLQLIERCFINFPS*EALTSS Trigger: GCTACTAGTCAGTGCTTCGCAAGATGGAAAATTAAT...AAAGCAGCGTTCAATAAGCTGTAGTTTATTGAAACTGTTGTGACATAAATGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR CAA 90 bp | GCAGATGTTATCCAAGCCTCCACAGGCAACGTAGTTCCCGGACGGGGCGTAGGCACCAGCGTGGCATCATaGCAGGCCTTCCGAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ADVIQASTGNVVPGRGVGTSVAS*QAFRAS Trigger: GGATGCTCGGAAGGCCTGCAATGATGCCACGCTGGT...GCCTACGCCCCGTCCGGGAACTACGTTGCCTGTGGAGGCTTGGATAACATCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184130.7 ENSMUST00000193050.2 |
||
| CDS-3UTR CAA 90 bp | AGATGTTATCCAAGCCTCCACAGGCAACGTAGTTCCCGGACGGGGCGTAGGCACCGCGCAGCGTGCGCCTaGTTCGCATTTGTATTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RCYPSLHRQRSSRTGRRHRAACA*FAFVFG Trigger: GCCGAATACAAATGCGAACAAGGCGCACGCTGCGCG...GTGCCTACGCCCCGTCCGGGAACTACGTTGCCTGTGGAGGCTTGGATAACATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193050.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCATTACAGAGAACACCAGGCAAGTGTCTCCAGATGCAGAGACAAGTCAACCAGCGTGGCATCATaGCAGGCCTTCCGAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SSHYREHQASVSRCRDKSTSVAS*QAFRAS Trigger: GGATGCTCGGAAGGCCTGCAATGATGCCACGCTGGT...TGACTTGTCTCTGCATCTGGAGACACTTGCCTGGTGTTCTCTGTAATGGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCTCCCGAACTTGTAATGATTTGTCCATCATCTAAGAATCGGCAGCAGGACACCAGCGTGGCATCATaGCAGGCCTTCCGAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VSPELVMICPSSKNRQQDTSVAS*QAFRAS Trigger: GGATGCTCGGAAGGCCTGCAATGATGCCACGCTGGT...GTCCTGCTGCCGATTCTTAGATGATGGACAAATCATTACAAGTTCGGGAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| CDS-3UTR CAA 90 bp | GTCAGGGACTTTCAGATTAAAATGCAATGTCACAGTCCAAGGGGACCTCCTTCACGCGCAGCGTGCGCCTaGTTCGCATTTGTATTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRDFQIKMQCHSPRGPPSRAACA*FAFVFG Trigger: GCCGAATACAAATGCGAACAAGGCGCACGCTGCGCG...TGAAGGAGGTCCCCTTGGACTGTGACATTGCATTTTAATCTGAAAGTCCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCATTACAGAGAACACCAGGCAAGTGTCTCCAGATGCAGAGACAAGTCAGGATATCCCACAGCTTaGAGGATGCATCACAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSHYREHQASVSRCRDKSGYPTA*RMHHKH Trigger: GTGCTTGTGATGCATCCTCAAAGCTGTGGGATATCC...TGACTTGTCTCTGCATCTGGAGACACTTGCCTGGTGTTCTCTGTAATGGGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS TCA 90 bp | GGTGAGCAGGTGTCTTTTGGAGTCGTAAATAACATTCTGATTTTCTaGACCAGCGTGGCATCATTGCAGGCCTTCCGAGCATCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GEQVSFGVVNNILIF*TSVASLQAFRASWI Trigger: GATCCAGGATGCTCGGAAGGCCTGCAATGATGCCACGCTGGTTCAGAAAATCAGAATGTTATTTACGACTCCAAAAGACACCTGCTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| CDS-3UTR CAA 90 bp | AAAACAATGAGCACAAGCAAGAATCTGTTCAAGTCAAGACGACCACTCAATGAAACCAGCGTGGCATCATaGCAGGCCTTCCGAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: KTMSTSKNLFKSRRPLNETSVAS*QAFRAS Trigger: GGATGCTCGGAAGGCCTGCAATGATGCCACGCTGGT...TTCATTGAGTGGTCGTCTTGACTTGAACAGATTCTTGCTTGTGCTCATTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAATGAGCACAAGCAAGAATCTGTTCAAGTCAAGACGACCACTCAATGAACGCGCAGCGTGCGCCTaGTTCGCATTTGTATTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KTMSTSKNLFKSRRPLNERAACA*FAFVFG Trigger: GCCGAATACAAATGCGAACAAGGCGCACGCTGCGCG...TTCATTGAGTGGTCGTCTTGACTTGAACAGATTCTTGCTTGTGCTCATTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAATGAGCACAAGCAAGAATCTGTTCAAGTCAAGACGACCACTCAATGAAGCGCCTTGTTCGCATTaGTATTCGGCCCACGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KTMSTSKNLFKSRRPLNEAPCSH*YSAHGV Trigger: GACTCCGTGGGCCGAATACAAATGCGAACAAGGCGC...TTCATTGAGTGGTCGTCTTGACTTGAACAGATTCTTGCTTGTGCTCATTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGGATGCTGGGACTCAAATCCAGGTCTTCTACAAGAGTGACACCTGTTTTTGGATATCCCACAGCTTaGAGGATGCATCACAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: MWMLGLKSRSSTRVTPVFGYPTA*RMHHKH Trigger: GTGCTTGTGATGCATCCTCAAAGCTGTGGGATATCC...AAAAACAGGTGTCACTCTTGTAGAAGACCTGGATTTGAGTCCCAGCATCCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTTTGCCTGCATGTATGTATGTGGGTGAGGAAGTCAGATATCCTGGGACTGTGGCGTGCATCTTATTaGTCGTATAGCTATCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: MFCLHVCMWVRKSDILGLWRASY*SYSYPK Trigger: TTTGGGATAGCTATACGACAAATAAGATGCACGCCA...CAGTCCCAGGATATCTGACTTCCTCACCCACATACATACATGCAGGCAAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155737.8 |
||
| CDS-3UTR CAA 90 bp | CACCATTTATGTCACAACAGTTTCAATAAACTACAGCTTATTGAACGCTGCTTTTGGCGTGCATCTTATTaGTCGTATAGCTATCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HHLCHNSFNKLQLIERCFWRASY*SYSYPK Trigger: TTTGGGATAGCTATACGACAAATAAGATGCACGCCA...AAAGCAGCGTTCAATAAGCTGTAGTTTATTGAAACTGTTGTGACATAAATGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 |
||
| CDS TCA 72 bp | AGGGACACCGACGGTGGCTTCCGACACTGCTCAGTGTaGGGGTGGTACAGGGCACTCAGATCAGAGGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RDTDGGFRHCSV*GWYRALRSEVK Trigger: TTTGACCTCTGATCTGAGTGCCCTGTACCACCCTCACACTGAGCAGTGTCGGAAGCCACCGTCGGTGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| CDS CAA 72 bp | AGCGAGGTGGCCGCGCAGCGTGCGCCTTGTTCGCATTaGTATTCGGCCCACGGAGTCCATATTAGACGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SEVAAQRAPCSH*YSAHGVHIRRD Trigger: ATCACGTCTAATATGGACTCCGTGGGCCGAATACAAATGCGAACAAGGCGCACGCTGCGCGGCCACCTCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 ENSMUST00000193050.2 |
||
| CDS CAA 90 bp | GTAGATCTTAGCGAGGTGGCCGCGCAGCGTGCGCCTTGTTCGCATTaGTATTCGGCCCACGGAGTCCATATTAGACGTGATCTGAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: VDLSEVAAQRAPCSH*YSAHGVHIRRDLNQ Trigger: CTGGTTCAGATCACGTCTAATATGGACTCCGTGGGCCGAATACAAATGCGAACAAGGCGCACGCTGCGCGGCCACCTCGCTAAGATCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 ENSMUST00000193050.2 |
||
| CDS TCA 72 bp | TGTATTCGGCCCACGGAGTCCATATTAGACGTGATCTaGACCAGCGTGGCATCATTGCAGGCCTTCCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CIRPTESILDVI*TSVASLQAFRA Trigger: TGCTCGGAAGGCCTGCAATGATGCCACGCTGGTTCAGATCACGTCTAATATGGACTCCGTGGGCCGAATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108234.8 ENSMUST00000155737.8 ENSMUST00000193050.2 |
||
| CDS CAA 72 bp | GGTGGTACAGGGCACTCAGATCAGAGGTCAAAAAGTTaGACCCTAAGTACAATGGGGCCGGTGAGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GGTGHSDQRSKS*TLSTMGPVSRC Trigger: ACACCTGCTCACCGGCCCCATTGTACTTAGGGTCAAACTTTTTGACCTCTGATCTGAGTGCCCTGTACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||
| CDS TCA 72 bp | GTGTCTTTTGGAGTCGTAAATAACATTCTGATTTTCTaGACCAGCGTGGCATCATTGCAGGCCTTCCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VSFGVVNNILIF*TSVASLQAFRA Trigger: TGCTCGGAAGGCCTGCAATGATGCCACGCTGGTTCAGAAAATCAGAATGTTATTTACGACTCCAAAAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184130.7 |
||