Pregenerated sensors for GNB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029713Ensembl transcript IDs: ENSMUST00000031726.15, ENSMUST00000111020.8, ENSMUST00000111023.8, ENSMUST00000111027.8, ENSMUST00000132525.8, ENSMUST00000140139.2, ENSMUST00000143495.8, ENSMUST00000150063.9, ENSMUST00000168746.8, ENSMUST00000170293.8
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGGCAGGGCTGCTCCCTaGCTGGGCCCATCTGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: PGREAWHMYPAPKLRACSGRAAP*LGPSGV Trigger: AACCCCAGATGGGCCCAGGCAGGGAGCAGCCCTGCC...ACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCGGCAGGGCTGCTCCCTaGCTGGGCCCATCTGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: PPRGTKPGYGSRTGGPVAGRAAP*LGPSGV Trigger: AACCCCAGATGGGCCCAGGCAGGGAGCAGCCCTGCC...GGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTCCTGTAGTGTGGGCATaGGCAGGGCTGCTCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: QTWVWEQDRRPCSPGREAPVVWA*AGLLPA Trigger: GGCAGGGAGCAGCCCTGCCCATGCCCACACTACAGG...AGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGGCAGGGCTGCTCCCTaGCTGGGCCCATCTGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: EAWHMYPAPKLRACSVGMGRAAP*LGPSGV Trigger: AACCCCAGATGGGCCCAGGCAGGGAGCAGCCCTGCC...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGCAGGGCTGCTCCCTaGCTGGGCCCATCTGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RGTKPGYGSRTGGPVAQGGRAAP*LGPSGV Trigger: AACCCCAGATGGGCCCAGGCAGGGAGCAGCCCTGCC...TCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCCTGTAGTGTGGGCATaGGCAGGGCTGCTCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PPRGTKPGYGSRTGGPVAPVVWA*AGLLPA Trigger: GGCAGGGAGCAGCCCTGCCCATGCCCACACTACAGG...GGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGACCTGTAGTGTGGGCATaGGCAGGGCTGCTCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: RGTKPGYGSRTGGPVAQGPVVWA*AGLLPA Trigger: GGCAGGGAGCAGCCCTGCCCATGCCCACACTACAGG...TCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGATCCGGGCCTGTAGTGTaGGCATGGGCAGGGCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RGTKPGYGSRTGGPVAQGSGPVV*AWAGLL Trigger: GAGCAGCCCTGCCCATGCCCACACTACAGGCCCGGA...TCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | GCCCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGCAGCAGCCGGCCGCTaGGCGAGAAGGCAACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQGGRLGTCTQPQSSGPVAAAGR*ARRQPR Trigger: CCTCGGTTGCCTTCTCGCGCAGCGGCCGGCTGCTGC...TACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | CAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTGCAGCAGCCGGCCGCTaGGCGAGAAGGCAACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTWVWEQDRRPCSPGREAAAAGR*ARRQPR Trigger: CCTCGGTTGCCTTCTCGCGCAGCGGCCGGCTGCTGC...AGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGCTCCAGCTCACTCATaGCGCCGGGCCCGTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGREAWHMYPAPKLRACSAPAHS*RRARGA Trigger: CGCCCCACGGGCCCGGCGCCATGAGTGAGCTGGAGC...ACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | ACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCGTCCTGGGAGGCGCTaGCCAGCAGCCTTGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TWVWEQDRRPCSPGREAWRPGRR*PAALSL Trigger: CAGACTCAAGGCTGCTGGTCAGCGCCTCCCAGGACG...CCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCCAGGAAGCGGCAGCATaGCAGGTACCCAGTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGYGSRTGGPVAQGGRLGQEAAA*QVPSVA Trigger: GGCCACACTGGGTACCTGTCATGCTGCCGCTTCCTG...GCCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | CCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCCACCTGACACAAAGGTaGGGCCATCGGGGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGYGSRTGGPVAQGGRLGHLTQR*GHRGPV Trigger: CACTGGCCCCCGATGGCCGCACCTTTGTGTCAGGTG...GCCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCAGCAGCCGGCCGCTaGGCGAGAAGGCAACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWAAAGR*ARRQPR Trigger: CCTCGGTTGCCTTCTCGCGCAGCGGCCGGCTGCTGC...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | GCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGGCGCAGCAGCCGGCCGCTaGGCGAGAAGGCAACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AWHMYPAPKLRACSVGMGAAAGR*ARRQPR Trigger: CCTCGGTTGCCTTCTCGCGCAGCGGCCGGCTGCTGC...GCCCATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | CAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTGCCATCGGGGGCCAGTaGCAGGGACATCACATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTWVWEQDRRPCSPGREAAIGGQ*QGHHIP Trigger: GGGGATGTGATGTCCCTGTCACTGGCCCCCGATGGC...AGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | ACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGGGCGTCACAGGCACCTaGCACAAAGGTGCGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TWVWEQDRRPCSPGREAWGVTGT*HKGAAI Trigger: GATGGCCGCACCTTTGTGTCAGGTGCCTGTGACGCC...CCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGCTGGCGTCCCGGATCTaGTTCCGGAGCTGCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWLASRI*FRSCSA Trigger: GGCCGAGCAGCTCCGGAACCAGATCCGGGACGCCAG...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 |
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| CDS-3UTR CCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGCAGCTCCTGGCCGCTaGCCCGAGGCCCGGGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVAAPGR*PEARDN Trigger: ATTATCCCGGGCCTCGGGCCAGCGGCCAGGAGCTGC...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCGGTCCAGCCCAGCTGTaGTCTGGGTCAGTGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGYGSRTGGPVAQGGRLGGPAQL*SGSVWN Trigger: ATTCCACACTGACCCAGATCACAGCTGGGCTGGACC...GCCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | ACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGGCTGACCAGCAGCCTTaGGTCTGTCCCCCAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: TWVWEQDRRPCSPGREAWADQQP*VCPPVH Trigger: ATGCACTGGGGGACAGACTCAAGGCTGCTGGTCAGC...CCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGCGTCCTGGGAGGCGCTaGCCAGCAGCCTTGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVRPGRR*PAALSL Trigger: CAGACTCAAGGCTGCTGGTCAGCGCCTCCCAGGACG...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGCGTCCTGGGAGGCGCTaGCCAGCAGCCTTGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWRPGRR*PAALSL Trigger: CAGACTCAAGGCTGCTGGTCAGCGCCTCCCAGGACG...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | GCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGGCCGTCCTGGGAGGCGCTaGCCAGCAGCCTTGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWHMYPAPKLRACSVGMGRPGRR*PAALSL Trigger: CAGACTCAAGGCTGCTGGTCAGCGCCTCCCAGGACG...GCCCATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCCATCGGGGGCCAGTaGCAGGGACATCACATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWAIGGQ*QGHHIP Trigger: GGGGATGTGATGTCCCTGTCACTGGCCCCCGATGGC...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | CCCCCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCGCCATCGGGGGCCAGTaGCAGGGACATCACATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRGTKPGYGSRTGGPVAAIGGQ*QGHHIP Trigger: GGGGATGTGATGTCCCTGTCACTGGCCCCCGATGGC...GGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | GCCCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTACACCTGACACAAAGGTaGGGCCATCGGGGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AQGGRLGTCTQPQSSGPVHLTQR*GHRGPV Trigger: CACTGGCCCCCGATGGCCGCACCTTTGTGTCAGGTG...TACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGCTGGCGTCCCGGATCTaGTTCCGGAGCTGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: EAWHMYPAPKLRACSVGMLASRI*FRSCSA Trigger: GGCCGAGCAGCTCCGGAACCAGATCCGGGACGCCAG...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCCTGAATTCGCCCCACTaGGTCCAGCCCAGCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: PGYGSRTGGPVAQGGRLGLNSPH*VQPSCD Trigger: ATCACAGCTGGGCTGGACCCAGTGGGGCGAATTCAG...GCCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGCAGGAAGCGGCAGCATaGCAGGTACCCAGTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWQEAAA*QVPSVA Trigger: GGCCACACTGGGTACCTGTCATGCTGCCGCTTCCTG...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGCCATCGGGGGCCAGTaGCAGGGACATCACATCCCC | + |
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Preference number: 4 (lower is better) Translates to: EAWHMYPAPKLRACSVGMAIGGQ*QGHHIP Trigger: GGGGATGTGATGTCCCTGTCACTGGCCCCCGATGGC...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | CCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGGCGTCACAGGCACCTaGCACAAAGGTGCGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: PGREAWHMYPAPKLRACSGVTGT*HKGAAI Trigger: GATGGCCGCACCTTTGTGTCAGGTGCCTGTGACGCC...ACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCCCGACTCGTGACCTATaGATGTCTGTCGGCACATGG | + |
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Preference number: 4 (lower is better) Translates to: PGYGSRTGGPVAQGGRLGPTRDL*MSVGTW Trigger: CCATGTGCCGACAGACATTCATAGGTCACGAGTCGG...GCCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | ACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGATCTGGTTCCGGAGCTaGTCGGCCTCCTGTCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: TWVWEQDRRPCSPGREAWIWFRS*SASCLS Trigger: ACTGAGACAGGAGGCCGAGCAGCTCCGGAACCAGAT...CCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 |
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| CDS-3UTR GCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGCACCTGACACAAAGGTaGGGCCATCGGGGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWHLTQR*GHRGPV Trigger: CACTGGCCCCCGATGGCCGCACCTTTGTGTCAGGTG...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | GCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGGCCACCTGACACAAAGGTaGGGCCATCGGGGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AWHMYPAPKLRACSVGMGHLTQR*GHRGPV Trigger: CACTGGCCCCCGATGGCCGCACCTTTGTGTCAGGTG...GCCCATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | CAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTATGAGCTTTCCGTCCTaGGAGGCGCTGACCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QTWVWEQDRRPCSPGREAMSFPS*EALTSS Trigger: GCTGCTGGTCAGCGCCTCCCAGGACGGAAAGCTCAT...AGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGCAGGAAGCGGCAGCATaGCAGGTACCCAGTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EAWHMYPAPKLRACSVGMQEAAA*QVPSVA Trigger: GGCCACACTGGGTACCTGTCATGCTGCCGCTTCCTG...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | AGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGCGTCACAGGCACCTaGCACAAAGGTGCGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RGTKPGYGSRTGGPVAQGGVTGT*HKGAAI Trigger: GATGGCCGCACCTTTGTGTCAGGTGCCTGTGACGCC...TCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGCGTCACAGGCACCTaGCACAAAGGTGCGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PRGTKPGYGSRTGGPVAQGVTGT*HKGAAI Trigger: GATGGCCGCACCTTTGTGTCAGGTGCCTGTGACGCC...CTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | CAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTGAACATCCCACAGCTTaGTGGAGGCGTCACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTWVWEQDRRPCSPGREAEHPTA*WRRHRH Trigger: GTGCCTGTGACGCCTCCATCAAGCTGTGGGATGTTC...AGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGTGTCGTGGGAATACATaGGCAGCTCCTGATCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TWVWEQDRRPCSPGREAWCRGNT*AAPDQP Trigger: GGGCTGATCAGGAGCTGCTCATGTATTCCCACGACA...CCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGCACCTGACACAAAGGTaGGGCCATCGGGGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EAWHMYPAPKLRACSVGMHLTQR*GHRGPV Trigger: CACTGGCCCCCGATGGCCGCACCTTTGTGTCAGGTG...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGACAGGTACCCAGTGTaGCCAGGCAGCTCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWDRYPV*PGSSLL Trigger: CAGCAGAGAGCTGCCTGGCCACACTGGGTACCTGTC...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGACAGGTACCCAGTGTaGCCAGGCAGCTCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVDRYPV*PGSSLL Trigger: CAGCAGAGAGCTGCCTGGCCACACTGGGTACCTGTC...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGGCGACAGGTACCCAGTGTaGCCAGGCAGCTCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWHMYPAPKLRACSVGMGDRYPV*PGSSLL Trigger: CAGCAGAGAGCTGCCTGGCCACACTGGGTACCTGTC...GCCCATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | GCCCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAAACCCCACCGTCTGCTaGCCTGTCTCAATGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQGGRLGTCTQPQSSGPVNPTVC*PVSMSH Trigger: GTGGGACATTGAGACAGGCCAGCAGACGGTGGGGTT...TACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTAACCCCACCGTCTGCTaGCCTGTCTCAATGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTWVWEQDRRPCSPGREANPTVC*PVSMSH Trigger: GTGGGACATTGAGACAGGCCAGCAGACGGTGGGGTT...AGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCCACGGTCACCCTTCATaGCATCCCAGATGTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGYGSRTGGPVAQGGRLGHGHPS*HPRCCS Trigger: ACTGCAACATCTGGGATGCCATGAAGGGTGACCGTG...GCCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGCTCCGTGTTCTCATCTaGATTCGCCCCACTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVLRVLI*IRPTGS Trigger: GGACCCAGTGGGGCGAATTCAGATGAGAACACGGAG...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGAACATCCCACAGCTTaGTGGAGGCGTCACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVEHPTA*WRRHRH Trigger: GTGCCTGTGACGCCTCCATCAAGCTGTGGGATGTTC...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGAACATCCCACAGCTTaGTGGAGGCGTCACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGREAWHMYPAPKLRACSEHPTA*WRRHRH Trigger: GTGCCTGTGACGCCTCCATCAAGCTGTGGGATGTTC...ACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | CCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTATCTGGTTCCGGAGCTaGTCGGCCTCCTGTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGREAWHMYPAPKLRACSIWFRS*SASCLS Trigger: ACTGAGACAGGAGGCCGAGCAGCTCCGGAACCAGAT...ACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 |
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| CDS-3UTR GCA 90 bp | CCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGCAAACCCCACCGTCTaGTGGCCTGTCTCAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGREAWHMYPAPKLRACSANPTV*WPVSMS Trigger: GGACATTGAGACAGGCCAGCAGACGGTGGGGTTTGC...ACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | CCCCCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCGCAAACCCCACCGTCTaGTGGCCTGTCTCAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRGTKPGYGSRTGGPVAANPTV*WPVSMS Trigger: GGACATTGAGACAGGCCAGCAGACGGTGGGGTTTGC...GGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR GCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGCCTCCTGTCTCAGTTaGTCCAGCTCACTCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVASCLS*SSSLMA Trigger: CGCCATGAGTGAGCTGGAGCAACTGAGACAGGAGGC...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111027.8 |
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| CDS-3UTR CCA 90 bp | CCCCCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCTGAATTCGCCCCACTaGGTCCAGCCCAGCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPRGTKPGYGSRTGGPVALNSPH*VQPSCD Trigger: ATCACAGCTGGGCTGGACCCAGTGGGGCGAATTCAG...GGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 |
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| CDS-3UTR CCA 90 bp | CCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGACAGGTACCCAGTGTaGCCAGGCAGCTCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRGTKPGYGSRTGGPVAQDRYPV*PGSSLL Trigger: CAGCAGAGAGCTGCCTGGCCACACTGGGTACCTGTC...CTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTAACCCCACCGTCTGCTaGCCTGTCTCAATGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGREAWHMYPAPKLRACSNPTVC*PVSMSH Trigger: GTGGGACATTGAGACAGGCCAGCAGACGGTGGGGTT...ACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCATGTCTGTCGGCACATaGAATCCCGAACATCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGYGSRTGGPVAQGGRLGMSVGT*NPEHPT Trigger: TGTGGGATGTTCGGGATTCCATGTGCCGACAGACAT...GCCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | ACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCACGGTCACCCTTCATaGCATCCCAGATGTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TWVWEQDRRPCSPGREAWHGHPS*HPRCCS Trigger: ACTGCAACATCTGGGATGCCATGAAGGGTGACCGTG...CCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | AGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGTCCAGCCCAGCTGTaGTCTGGGTCAGTGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGTKPGYGSRTGGPVAQGGPAQL*SGSVWN Trigger: ATTCCACACTGACCCAGATCACAGCTGGGCTGGACC...TCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | AGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGACTCCGTGTTCTCATCTaGATTCGCCCCACTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGTKPGYGSRTGGPVAQGLRVLI*IRPTGS Trigger: GGACCCAGTGGGGCGAATTCAGATGAGAACACGGAG...TCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 |
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| CDS-3UTR TCA 90 bp | CCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGAACATCCCACAGCTTaGTGGAGGCGTCACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRGTKPGYGSRTGGPVAQEHPTA*WRRHRH Trigger: GTGCCTGTGACGCCTCCATCAAGCTGTGGGATGTTC...CTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGAACATCCCACAGCTTaGTGGAGGCGTCACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EAWHMYPAPKLRACSVGMEHPTA*WRRHRH Trigger: GTGCCTGTGACGCCTCCATCAAGCTGTGGGATGTTC...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | GCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGGCCCGACTCGTGACCTATaGATGTCTGTCGGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: AWHMYPAPKLRACSVGMGPTRDL*MSVGTW Trigger: CCATGTGCCGACAGACATTCATAGGTCACGAGTCGG...GCCCATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGCCGACTCGTGACCTATaGATGTCTGTCGGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVPTRDL*MSVGTW Trigger: CCATGTGCCGACAGACATTCATAGGTCACGAGTCGG...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGTGTCGTGGGAATACATaGGCAGCTCCTGATCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWCRGNT*AAPDQP Trigger: GGGCTGATCAGGAGCTGCTCATGTATTCCCACGACA...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR TCA 90 bp | CCCCCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCTGTCGTGGGAATACATaGGCAGCTCCTGATCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRGTKPGYGSRTGGPVACRGNT*AAPDQP Trigger: GGGCTGATCAGGAGCTGCTCATGTATTCCCACGACA...GGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGGCCCATTCCATCATCTGTaGCCCCAAGGCAGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AWHMYPAPKLRACSVGMGPFHHL*PQGSSH Trigger: GTGTGAGCTGCCTTGGGGTCACAGATGATGGAATGG...GCCCATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCCATTCCATCATCTGTaGCCCCAAGGCAGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PPRGTKPGYGSRTGGPVAPFHHL*PQGSSH Trigger: GTGTGAGCTGCCTTGGGGTCACAGATGATGGAATGG...GGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGCCATTCCATCATCTGTaGCCCCAAGGCAGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWPFHHL*PQGSSH Trigger: GTGTGAGCTGCCTTGGGGTCACAGATGATGGAATGG...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGCCATTCCATCATCTGTaGCCCCAAGGCAGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVPFHHL*PQGSSH Trigger: GTGTGAGCTGCCTTGGGGTCACAGATGATGGAATGG...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGGCTGCCCTCTCGGGTCTTaGGACTATAGATGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AWHMYPAPKLRACSVGMGCPLGS*DYRWSR Trigger: TCTGCTCCATCTATAGTCTCAAGACCCGAGAGGGCA...GCCCATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTTGCCCTCTCGGGTCTTaGGACTATAGATGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGREAWHMYPAPKLRACSCPLGS*DYRWSR Trigger: TCTGCTCCATCTATAGTCTCAAGACCCGAGAGGGCA...ACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGTGCCCTCTCGGGTCTTaGGACTATAGATGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVCPLGS*DYRWSR Trigger: TCTGCTCCATCTATAGTCTCAAGACCCGAGAGGGCA...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGCCGACTCGTGACCTATaGATGTCTGTCGGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: EAWHMYPAPKLRACSVGMPTRDL*MSVGTW Trigger: CCATGTGCCGACAGACATTCATAGGTCACGAGTCGG...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGACCGACTCGTGACCTATaGATGTCTGTCGGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: RGTKPGYGSRTGGPVAQGPTRDL*MSVGTW Trigger: CCATGTGCCGACAGACATTCATAGGTCACGAGTCGG...TCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTATTGATGTCCGACTCGTaGCCTATGAATGTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AQGGRLGTCTQPQSSGPVLMSDS*PMNVCR Trigger: CCGACAGACATTCATAGGTCACGAGTCGGACATCAA...TACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGCCATTCCATCATCTGTaGCCCCAAGGCAGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: EAWHMYPAPKLRACSVGMPFHHL*PQGSSH Trigger: GTGTGAGCTGCCTTGGGGTCACAGATGATGGAATGG...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCAGATGATGTTGTCGTaGGAATACATGAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TWVWEQDRRPCSPGREAWQMMLS*EYMSSS Trigger: GGAGCTGCTCATGTATTCCCACGACAACATCATCTG...CCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGCACGGTCACCCTTCATaGCATCCCAGATGTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWHGHPS*HPRCCS Trigger: ACTGCAACATCTGGGATGCCATGAAGGGTGACCGTG...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGTGCCCTCTCGGGTCTTaGGACTATAGATGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRGTKPGYGSRTGGPVAQCPLGS*DYRWSR Trigger: TCTGCTCCATCTATAGTCTCAAGACCCGAGAGGGCA...CTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGTTGATGTCCGACTCGTaGCCTATGAATGTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWLMSDS*PMNVCR Trigger: CCGACAGACATTCATAGGTCACGAGTCGGACATCAA...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGTTGATGTCCGACTCGTaGCCTATGAATGTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVLMSDS*PMNVCR Trigger: CCGACAGACATTCATAGGTCACGAGTCGGACATCAA...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCATGGCATAGATTTTTaGCAGGTGTCCACGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPRGTKPGYGSRTGGPVAHGIDF*QVSTEG Trigger: ACCCTCCGTGGACACCTGGCAAAAATCTATGCCATG...GGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCATGTCTGTCGGCACATaGAATCCCGAACATCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PPRGTKPGYGSRTGGPVAMSVGT*NPEHPT Trigger: TGTGGGATGTTCGGGATTCCATGTGCCGACAGACAT...GGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGATGTCTGTCGGCACATaGAATCCCGAACATCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVMSVGT*NPEHPT Trigger: TGTGGGATGTTCGGGATTCCATGTGCCGACAGACAT...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGATGTCTGTCGGCACATaGAATCCCGAACATCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWMSVGT*NPEHPT Trigger: TGTGGGATGTTCGGGATTCCATGTGCCGACAGACAT...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTCAGATGATGTTGTCGTaGGAATACATGAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTWVWEQDRRPCSPGREAQMMLS*EYMSSS Trigger: GGAGCTGCTCATGTATTCCCACGACAACATCATCTG...AGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGATTGATGTCCGACTCGTaGCCTATGAATGTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGTKPGYGSRTGGPVAQGLMSDS*PMNVCR Trigger: CCGACAGACATTCATAGGTCACGAGTCGGACATCAA...TCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGTTGATGTCCGACTCGTaGCCTATGAATGTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: EAWHMYPAPKLRACSVGMLMSDS*PMNVCR Trigger: CCGACAGACATTCATAGGTCACGAGTCGGACATCAA...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGCATGGCATAGATTTTTaGCAGGTGTCCACGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAWHMYPAPKLRACSVGMHGIDF*QVSTEG Trigger: ACCCTCCGTGGACACCTGGCAAAAATCTATGCCATG...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGCATGGCATAGATTTTTaGCAGGTGTCCACGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRGTKPGYGSRTGGPVAQHGIDF*QVSTEG Trigger: ACCCTCCGTGGACACCTGGCAAAAATCTATGCCATG...CTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAATGTCTGTCGGCACATaGAATCCCGAACATCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RGTKPGYGSRTGGPVAQGMSVGT*NPEHPT Trigger: TGTGGGATGTTCGGGATTCCATGTGCCGACAGACAT...TCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
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| CDS-3UTR CCA 90 bp | CCCCCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGATGATGTTGTCGTaGGAATACATGAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRGTKPGYGSRTGGPVAQMMLS*EYMSSS Trigger: GGAGCTGCTCATGTATTCCCACGACAACATCATCTG...GGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGCAGATGATGTTGTCGTaGGAATACATGAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GREAWHMYPAPKLRACSVQMMLS*EYMSSS Trigger: GGAGCTGCTCATGTATTCCCACGACAACATCATCTG...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCTGCTGACCCTGACATaGCCCTCTCGGGTCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TWVWEQDRRPCSPGREAWLLTLT*PSRVLR Trigger: TCTCAAGACCCGAGAGGGCAATGTCAGGGTCAGCAG...CCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCCTGGTGATGATTTGGTaGTCGTCCAGGAAGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGYGSRTGGPVAQGGRLGLVMIW*SSRKRQ Trigger: CTGCCGCTTCCTGGACGACAACCAAATCATCACCAG...GCCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTACTGCTGACCCTGACATaGCCCTCTCGGGTCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AQGGRLGTCTQPQSSGPVLLTLT*PSRVLR Trigger: TCTCAAGACCCGAGAGGGCAATGTCAGGGTCAGCAG...TACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAGGGAGGCTTGGCTGGTGATGATTTGGTaGTCGTCCAGGAAGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TWVWEQDRRPCSPGREAWLVMIW*SSRKRQ Trigger: CTGCCGCTTCCTGGACGACAACCAAATCATCACCAG...CCAAGCCTCCCTCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTCTGCTGACCCTGACATaGCCCTCTCGGGTCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGREAWHMYPAPKLRACSLLTLT*PSRVLR Trigger: TCTCAAGACCCGAGAGGGCAATGTCAGGGTCAGCAG...ACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGCTGCTGACCCTGACATaGCCCTCTCGGGTCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GREAWHMYPAPKLRACSVLLTLT*PSRVLR Trigger: TCTCAAGACCCGAGAGGGCAATGTCAGGGTCAGCAG...CACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | GCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGGGCCTGCTGACCCTGACATaGCCCTCTCGGGTCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AWHMYPAPKLRACSVGMGLLTLT*PSRVLR Trigger: TCTCAAGACCCGAGAGGGCAATGTCAGGGTCAGCAG...GCCCATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTACTGGTGATGATTTGGTaGTCGTCCAGGAAGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AQGGRLGTCTQPQSSGPVLVMIW*SSRKRQ Trigger: CTGCCGCTTCCTGGACGACAACCAAATCATCACCAG...TACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS CCA 90 bp | GTGTCCACGGAGGGTCCTCCGTGTTCTCATCTGAATTCGCCCCACTaGGTCCAGCCCAGCTGTGATCTGGGTCAGTGTGGAATCCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSTEGPPCSHLNSPH*VQPSCDLGQCGIPA Trigger: TGCGGGGATTCCACACTGACCCAGATCACAGCTGGGCTGGACCCAGTGGGGCGAATTCAGATGAGAACACGGAGGACCCTCCGTGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 ENSMUST00000132525.8 ENSMUST00000140139.2 ENSMUST00000150063.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGCTGGTGATGATTTGGTaGTCGTCCAGGAAGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGRLGTCTQPQSSGPVVWLVMIW*SSRKRQ Trigger: CTGCCGCTTCCTGGACGACAACCAAATCATCACCAG...CCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTGTGGGCATGCTGGTGATGATTTGGTaGTCGTCCAGGAAGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EAWHMYPAPKLRACSVGMLVMIW*SSRKRQ Trigger: CTGCCGCTTCCTGGACGACAACCAAATCATCACCAG...CATGCCCACACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGAGGGAGGCTTGGCACATGTACCCAGCCCCAAAGCTCCGGGCCTGTAGTATGCCGCAGATGATGTaGTCGTGGGAATACATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGREAWHMYPAPKLRACSMPQMM*SWEYMS Trigger: GCTCATGTATTCCCACGACAACATCATCTGCGGCAT...ACTACAGGCCCGGAGCTTTGGGGCTGGGTACATGTGCCAAGCCTCCCTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGATGCCGCAGATGATGTaGTCGTGGGAATACATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRGTKPGYGSRTGGPVAQMPQMM*SWEYMS Trigger: GCTCATGTATTCCCACGACAACATCATCTGCGGCAT...CTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAACCAAACCTGGGTATGGGAGCAGGACCGGAGGCCCTGTAGCCCAGGGAATGCCGCAGATGATGTaGTCGTGGGAATACATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGTKPGYGSRTGGPVAQGMPQMM*SWEYMS Trigger: GCTCATGTATTCCCACGACAACATCATCTGCGGCAT...TCCCTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000143495.8 |
||
| CDS CCA 72 bp | GTGGAATCCCCGCATGCTTTTCTGGCGTCCCGGATCTaGTTCCGGAGCTGCTCGGCCTCCTGTCTCAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VESPHAFLASRI*FRSCSASCLSC Trigger: GCAACTGAGACAGGAGGCCGAGCAGCTCCGGAACCAGATCCGGGACGCCAGAAAAGCATGCGGGGATTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 ENSMUST00000132525.8 ENSMUST00000140139.2 ENSMUST00000150063.9 |
||
| CDS CCA 72 bp | GAGGGTCCTCCGTGTTCTCATCTGAATTCGCCCCACTaGGTCCAGCCCAGCTGTGATCTGGGTCAGTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EGPPCSHLNSPH*VQPSCDLGQCG Trigger: TCCACACTGACCCAGATCACAGCTGGGCTGGACCCAGTGGGGCGAATTCAGATGAGAACACGGAGGACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031726.15 ENSMUST00000111027.8 ENSMUST00000132525.8 ENSMUST00000140139.2 ENSMUST00000150063.9 |
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| CDS TCA 72 bp | GGTGATGATTTGGTTGTCGTCCAGGAAGCGGCAGCATaGCAGGTACCCAGTGTGGCCAGGCAGCTCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GDDLVVVQEAAA*QVPSVARQLSA Trigger: AGCAGAGAGCTGCCTGGCCACACTGGGTACCTGTCATGCTGCCGCTTCCTGGACGACAACCAAATCATCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000132525.8 ENSMUST00000140139.2 ENSMUST00000143495.8 ENSMUST00000150063.9 ENSMUST00000168746.8 ENSMUST00000170293.8 |
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| CDS CAA 90 bp | CCTATGAATGTCTGTCGGCACATGGAATCCCGAACATCCCACAGCTaGATGGAGGCGTCACAGGCACCTGACACAAAGGTGCGGCCATCG | + |
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Preference number: 6 (lower is better) Translates to: PMNVCRHMESRTSHS*MEASQAPDTKVRPS Trigger: CGATGGCCGCACCTTTGTGTCAGGTGCCTGTGACGCCTCCATCAAGCTGTGGGATGTTCGGGATTCCATGTGCCGACAGACATTCATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000132525.8 ENSMUST00000143495.8 ENSMUST00000150063.9 ENSMUST00000168746.8 ENSMUST00000170293.8 |
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| CDS TCA 72 bp | TCTGTCGGCACATGGAATCCCGAACATCCCACAGCTTaGTGGAGGCGTCACAGGCACCTGACACAAAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SVGTWNPEHPTA*WRRHRHLTQRC Trigger: GCACCTTTGTGTCAGGTGCCTGTGACGCCTCCATCAAGCTGTGGGATGTTCGGGATTCCATGTGCCGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000132525.8 ENSMUST00000143495.8 ENSMUST00000150063.9 ENSMUST00000168746.8 ENSMUST00000170293.8 |
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| CDS CAA 72 bp | GTCTGTCGGCACATGGAATCCCGAACATCCCACAGCTaGATGGAGGCGTCACAGGCACCTGACACAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VCRHMESRTSHS*MEASQAPDTKV Trigger: CACCTTTGTGTCAGGTGCCTGTGACGCCTCCATCAAGCTGTGGGATGTTCGGGATTCCATGTGCCGACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000031726.15 ENSMUST00000111020.8 ENSMUST00000111023.8 ENSMUST00000111027.8 ENSMUST00000132525.8 ENSMUST00000143495.8 ENSMUST00000150063.9 ENSMUST00000168746.8 ENSMUST00000170293.8 |
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