Pregenerated sensors for GNAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009108Ensembl transcript IDs: ENSMUST00000058669.15, ENSMUST00000131856.3, ENSMUST00000151326.8
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGTCATGGCCGCTTTCTGTGGCCAACCACAGCAGCCAGCTACCCTaGGCCTCCCCTTCAGTTAGGTCTGTGCTCTTCAGAGTGACCCTG | + |
|
Preference number: 1 (lower is better) Translates to: LSWPLSVANHSSQLP*ASPSVRSVLFRVTL Trigger: CAGGGTCACTCTGAAGAGCACAGACCTAACTGAAGGGGAGGCCCAGGGTAGCTGGCTGCTGTGGTTGGCCACAGAAAGCGGCCATGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR CCA 90 bp | GGAGAAATGAAGCTTTTCTGTTCTTATACTAAACAGAACCAGCCTTaGAACCTGGGCGTTAGGGTCGCTGGCCATGCCTTCGTTACAGTG | + |
|
Preference number: 1 (lower is better) Translates to: GEMKLFCSYTKQNQP*NLGVRVAGHAFVTV Trigger: CACTGTAACGAAGGCATGGCCAGCGACCCTAACGCCCAGGTTCCAAGGCTGGTTCTGTTTAGTATAAGAACAGAAAAGCTTCATTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR GCA 90 bp | TCTCTATCACCAACAGGATGGGCTGATTTGACACATTCTGGTACATaGGAACTAATTTTCTGCATGAAGCCTCAGATTCTAAGCTTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: SLSPTGWADLTHSGT*ELIFCMKPQILSLL Trigger: AAGCAAGCTTAGAATCTGAGGCTTCATGCAGAAAATTAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGATAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR GCA 90 bp | GGATGGGCTGATTTGACACATTCTGGTACATGCGAACTAATTTTCTaGATGAAGCCTCAGATTCTAAGCTTGCTTATAGAATGTATATTC | + |
|
Preference number: 1 (lower is better) Translates to: GWADLTHSGTCELIF*MKPQILSLLIECIF Trigger: GAATATACATTCTATAAGCAAGCTTAGAATCTGAGGCTTCATGCAGAAAATTAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR-3UTR TCA 90 bp | GTCCATCAGGCAGCTGTCATGGCCGCTTTCTGTGGCCAACCACAGCAGCCAGCTCAGGATGGGCTGATTTaGCACATTCTGGTACATGCG | + |
|
Preference number: 2 (lower is better) Translates to: VHQAAVMAAFCGQPQQPAQDGLI*HILVHA Trigger: CGCATGTACCAGAATGTGTCAAATCAGCCCATCCTG...AGCTGGCTGCTGTGGTTGGCCACAGAAAGCGGCCATGACAGCTGCCTGATGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR-3UTR CCA 90 bp | CCAACCACAGCAGCCAGCTACCCTGGGCCTCCCCTTCAGTTAGGTCTGTGCTCTCTATCACCAACAGGATaGGCTGATTTGACACATTCT | + |
|
Preference number: 2 (lower is better) Translates to: PTTAASYPGPPLQLGLCSLSPTG*ADLTHS Trigger: AGAATGTGTCAAATCAGCCCATCCTGTTGGTGATAG...AGAGCACAGACCTAACTGAAGGGGAGGCCCAGGGTAGCTGGCTGCTGTGGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCAGCTGTCATGGCCGCTTTCTGTGGCCAACCACAGCAGCCAGCTACCCTGTCTGCATCGGAGAAATaGAGCTTTTCTGTTCTTATA | + |
|
Preference number: 2 (lower is better) Translates to: QAAVMAAFCGQPQQPATLSASEK*SFSVLI Trigger: TATAAGAACAGAAAAGCTTCATTTCTCCGATGCAGA...CAGGGTAGCTGGCTGCTGTGGTTGGCCACAGAAAGCGGCCATGACAGCTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCAGCTGTCATGGCCGCTTTCTGTGGCCAACCACAGCAGCCAGCTACCCTGACACATTCTGGTACATaGGAACTAATTTTCTGCATG | + |
|
Preference number: 2 (lower is better) Translates to: QAAVMAAFCGQPQQPATLTHSGT*ELIFCM Trigger: CATGCAGAAAATTAGTTCGCATGTACCAGAATGTGT...CAGGGTAGCTGGCTGCTGTGGTTGGCCACAGAAAGCGGCCATGACAGCTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR-3UTR CCA 90 bp | TCATACAGACTGGGACTTCTGCATCGGAGAAATGAAGCTTTTCTGTTCTTATACAAACAGAACCAGCCTTaGAACCTGGGCGTTAGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SYRLGLLHRRNEAFLFLYKQNQP*NLGVRV Trigger: GACCCTAACGCCCAGGTTCCAAGGCTGGTTCTGTTT...GTATAAGAACAGAAAAGCTTCATTTCTCCGATGCAGAAGTCCCAGTCTGTATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR-3UTR GCA 90 bp | TCATACAGACTGGGACTTCTGCATCGGAGAAATGAAGCTTTTCTGTTCTTATACTGCGAACTAATTTTCTaGATGAAGCCTCAGATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: SYRLGLLHRRNEAFLFLYCELIF*MKPQIL Trigger: TAGAATCTGAGGCTTCATGCAGAAAATTAGTTCGCA...GTATAAGAACAGAAAAGCTTCATTTCTCCGATGCAGAAGTCCCAGTCTGTATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR CCA 72 bp | GGTAGTCCATCAGGCAGCTGTCATGGCCGCTTTCTGTaGCCAACCACAGCAGCCAGCTACCCTGGGCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GSPSGSCHGRFL*PTTAASYPGPP Trigger: GGGAGGCCCAGGGTAGCTGGCTGCTGTGGTTGGCCACAGAAAGCGGCCATGACAGCTGCCTGATGGACTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR CCA 72 bp | AAGCTTTTCTGTTCTTATACTAAACAGAACCAGCCTTaGAACCTGGGCGTTAGGGTCGCTGGCCATGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KLFCSYTKQNQP*NLGVRVAGHAF Trigger: GAAGGCATGGCCAGCGACCCTAACGCCCAGGTTCCAAGGCTGGTTCTGTTTAGTATAAGAACAGAAAAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR CCA 72 bp | AGAAATAAGCAGGCTCGCATCTTCTCTCCTGTAATCTaGGTCTCTGAGCTGAGGCACACACATAGGACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RNKQARIFSPVI*VSELRHTHRTS Trigger: ACTGGTCCTATGTGTGTGCCTCAGCTCAGAGACCCAGATTACAGGAGAGAAGATGCGAGCCTGCTTATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR TCA 72 bp | CCTTCAGTTAGGTCTGTGCTCTTCAGAGTGACCCTGTaGAGTAGGCAGGGAAGTTACCTTCATCATACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PSVRSVLFRVTL*SRQGSYLHHTD Trigger: GTCTGTATGATGAAGGTAACTTCCCTGCCTACTTCACAGGGTCACTCTGAAGAGCACAGACCTAACTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR CCA 72 bp | ACAGTCCTGAGCATGCCTTCTCTATCACCAACAGGATaGGCTGATTTGACACATTCTGGTACATGCGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: TVLSMPSLSPTG*ADLTHSGTCEL Trigger: TAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGATAGAGAAGGCATGCTCAGGACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR TCA 72 bp | CCTGAGCATGCCTTCTCTATCACCAACAGGATGGGCTaGTTTGACACATTCTGGTACATGCGAACTAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: PEHAFSITNRMG*FDTFWYMRTNF Trigger: AAAATTAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGATAGAGAAGGCATGCTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR GCA 72 bp | CCAACAGGATGGGCTGATTTGACACATTCTGGTACATaGGAACTAATTTTCTGCATGAAGCCTCAGATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PTGWADLTHSGT*ELIFCMKPQIL Trigger: TAGAATCTGAGGCTTCATGCAGAAAATTAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGCCAACCACAGCAGCCAGCTACCCTGGGCCTCCCCTTCAGTTAGGTCTCCAACTCAGGAGGCATaGTCCCCTCCTCGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVANHSSQLPWASPSVRSPTQEA*SPPRWS Trigger: ACTCCACCGAGGAGGGGACCATGCCTCCTGAGTTGG...AGACCTAACTGAAGGGGAGGCCCAGGGTAGCTGGCTGCTGTGGTTGGCCACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGCTGTCATGGCCGCTTTCTGTGGCCAACCACAGCAGCCAGCTACCCTGGGCATCCGCACAGCTTaGCTCTGCATAGTCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAAVMAAFCGQPQQPATLGIRTA*LCIVNA Trigger: GGCATTGACTATGCAGAGCCAAGCTGTGCGGATGCC...CAGGGTAGCTGGCTGCTGTGGTTGGCCACAGAAAGCGGCCATGACAGCTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGCTGTCATGGCCGCTTTCTGTGGCCAACCACAGCAGCCAGCTACCCTGGCTCCTTGGACCTCCTaGCAAGTTCTTTGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAAVMAAFCGQPQQPATLAPWTS*QVLCPQ Trigger: CTGAGGACAAAGAACTTGCCAGGAGGTCCAAGGAGC...CAGGGTAGCTGGCTGCTGTGGTTGGCCACAGAAAGCGGCCATGACAGCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR TCA 90 bp | ACACTGCTAACAGTCCTGAGCATGCCTTCTCTATCACCAACAGGATGGGCTGATAAGATGCCGAGTCATTaGGCTGGAACTCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLLTVLSMPSLSPTGWADKMPSH*AGTLQL Trigger: GAGCTGCAGAGTTCCAGCTCAATGACTCGGCATCTT...ATCAGCCCATCCTGTTGGTGATAGAGAAGGCATGCTCAGGACTGTTAGCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CCA 90 bp | CCTGTAATCTGGGTCTCTGAGCTGAGGCACACACATAGGACCAGTAAAACCACAGCCGAGTCATTGAGCTaGAACTCTGCAGCTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVIWVSELRHTHRTSKTTAESLS*NSAALS Trigger: TGACAGAGCTGCAGAGTTCCAGCTCAATGACTCGGC...TGTGGTTTTACTGGTCCTATGTGTGTGCCTCAGCTCAGAGACCCAGATTACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR TCA 90 bp | TCATACAGACTGGGACTTCTGCATCGGAGAAATGAAGCTTTTCTGTTCTTATACAGTCAGCCAGGTTGTTaGGCTGTCTCCCGGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: SYRLGLLHRRNEAFLFLYSQPGC*AVSRHP Trigger: CGGATGCCGGGAGACAGCTCAACAACCTGGCTGACT...GTATAAGAACAGAAAAGCTTCATTTCTCCGATGCAGAAGTCCCAGTCTGTATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR TCA 90 bp | CCTGTAATCTGGGTCTCTGAGCTGAGGCACACACATAGGACCAGTAAAACCACAGGTTGCAGATGCTGTTaGACAGATGCAAAGACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVIWVSELRHTHRTSKTTGCRCC*TDAKTR Trigger: ACGAGTCTTTGCATCTGTTCAACAGCATCTGCAACC...TGTGGTTTTACTGGTCCTATGTGTGTGCCTCAGCTCAGAGACCCAGATTACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR TCA 90 bp | TCACCAACAGGATGGGCTGATTTGACACATTCTGGTACATGCGAACTAATTTTCCTGTCAAAGCAGGCTTaGACTCCACCGTCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPTGWADLTHSGTCELIFLSKQA*TPPSFH Trigger: GTGGAAGGACGGTGGAGTTCAAGCCTGCTTTGACAG...GAAAATTAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR GCA 90 bp | CCTGTAATCTGGGTCTCTGAGCTGAGGCACACACATAGGACCAGTAAAACCACAATGCTGTTGAACAGATaGAAAGACTCGTGCATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PVIWVSELRHTHRTSKTTMLLNR*KDSCMR Trigger: TCGCATGCACGAGTCTTTGCATCTGTTCAACAGCAT...TGTGGTTTTACTGGTCCTATGTGTGTGCCTCAGCTCAGAGACCCAGATTACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CCA 90 bp | TCTCTATCACCAACAGGATGGGCTGATTTGACACATTCTGGTACATGCGAACTATCTTCTCCAGCTCCTTaGACCTCCTGGCAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSPTGWADLTHSGTCELSSPAP*TSWQVL Trigger: AAGAACTTGCCAGGAGGTCCAAGGAGCTGGAGAAGA...TAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGATAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CCA 90 bp | TCACCAACAGGATGGGCTGATTTGACACATTCTGGTACATGCGAACTAATTTTCGCCGCAAAGAACTTGTaGTTGCAGATGCTGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPTGWADLTHSGTCELIFAAKNL*LQMLLN Trigger: GTTCAACAGCATCTGCAACCACAAGTTCTTTGCGGC...GAAAATTAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| 3UTR CAA 72 bp | AGCATGCCTTCTCTATCACCAACAGGATGGGCTGATTaGACACATTCTGGTACATGCGAACTAATTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SMPSLSPTGWAD*THSGTCELIFC Trigger: GCAGAAAATTAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGATAGAGAAGGCATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGCTGTCATGGCCGCTTTCTGTGGCCAACCACAGCAGCCAGCTACCCTGGTGGAGTCAGCCAGGTaGTTGAGCTGTCTCCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QAAVMAAFCGQPQQPATLVESAR*LSCLPA Trigger: TGCCGGGAGACAGCTCAACAACCTGGCTGACTCCAC...CAGGGTAGCTGGCTGCTGTGGTTGGCCACAGAAAGCGGCCATGACAGCTGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS TCA 90 bp | ACTCAGGAGGCATGGTCCCCTCCTCGGTGGAGTCAGCCAGGTTGTTaGGCTGTCTCCCGGCATCCGCACAGCTTGGCTCTGCATAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TQEAWSPPRWSQPGC*AVSRHPHSLALHSQ Trigger: TTGACTATGCAGAGCCAAGCTGTGCGGATGCCGGGAGACAGCTCAACAACCTGGCTGACTCCACCGAGGAGGGGACCATGCCTCCTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058669.15 ENSMUST00000151326.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGCCAACCACAGCAGCCAGCTACCCTGGGCCTCCCCTTCAGTTAGGTCTCTCCTGGCAAGTTCTTaGTCCTCAGCACTGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVANHSSQLPWASPSVRSLLASS*SSALMP Trigger: TGGCATCAGTGCTGAGGACAAAGAACTTGCCAGGAG...AGACCTAACTGAAGGGGAGGCCCAGGGTAGCTGGCTGCTGTGGTTGGCCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CAA 90 bp | ATCAGGCAGCTGTCATGGCCGCTTTCTGTGGCCAACCACAGCAGCCAGCTACCCATGATGCCTGTTGTCTaGACTCTGGATCGAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: IRQLSWPLSVANHSSQLPMMPVV*TLDRST Trigger: CGTGCTTCGATCCAGAGTCAAGACAACAGGCATCAT...GGGTAGCTGGCTGCTGTGGTTGGCCACAGAAAGCGGCCATGACAGCTGCCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGCCAACCACAGCAGCCAGCTACCCTGGGCCTCCCCTTCAGTTAGGTCTGTAGCCGCAAAGAACTaGTGGTTGCAGATGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVANHSSQLPWASPSVRSVAAKN*WLQMLL Trigger: CAACAGCATCTGCAACCACAAGTTCTTTGCGGCTAC...AGACCTAACTGAAGGGGAGGCCCAGGGTAGCTGGCTGCTGTGGTTGGCCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS CCA 90 bp | AAGTGGAAAACATCTTGCGTTGCTCCTAACACCCGACTCTCCTTGTaGTCTGCCGGTCTCTGGTCTACTTCTTCTCCTGCTTCCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KWKTSCVAPNTRLSL*SAGLWSTSSPASTL Trigger: CAGGGTGGAAGCAGGAGAAGAAGTAGACCAGAGACCGGCAGACCACAAGGAGAGTCGGGTGTTAGGAGCAACGCAAGATGTTTTCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS-3UTR CAA 90 bp | CCTGTAATCTGGGTCTCTGAGCTGAGGCACACACATAGGACCAGTAAAACCACATTCTTCTCCAGCTCCTaGGACCTCCTGGCAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVIWVSELRHTHRTSKTTFFSSS*DLLASS Trigger: AGAACTTGCCAGGAGGTCCAAGGAGCTGGAGAAGAA...TGTGGTTTTACTGGTCCTATGTGTGTGCCTCAGCTCAGAGACCCAGATTACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CAA 90 bp | TCACCAACAGGATGGGCTGATTTGACACATTCTGGTACATGCGAACTAATTTTCGAGTCAGCCAGGTTGTaGAGCTGTCTCCCGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SPTGWADLTHSGTCELIFESARL*SCLPAS Trigger: GGATGCCGGGAGACAGCTCAACAACCTGGCTGACTC...GAAAATTAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CAA 90 bp | ACACTGCTAACAGTCCTGAGCATGCCTTCTCTATCACCAACAGGATGGGCTGATGCAAAGAACTTGTGGTaGCAGATGCTGTTGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLLTVLSMPSLSPTGWADAKNLW*QMLLNR Trigger: TCTGTTCAACAGCATCTGCAACCACAAGTTCTTTGC...ATCAGCCCATCCTGTTGGTGATAGAGAAGGCATGCTCAGGACTGTTAGCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CAA 90 bp | TCACCAACAGGATGGGCTGATTTGACACATTCTGGTACATGCGAACTAATTTTCAGCAGCTTGACAGTCTaGGCTTCCTTGTCAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SPTGWADLTHSGTCELIFSSLTV*ASLSAS Trigger: GGATGCTGACAAGGAAGCCAAGACTGTCAAGCTGCT...GAAAATTAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS-3UTR CAA 90 bp | TCTCTATCACCAACAGGATGGGCTGATTTGACACATTCTGGTACATGCGAACTATCAAAGAGGTCCTTCTaGTTGAGAAAGAGAACGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLSPTGWADLTHSGTCELSKRSF*LRKRTM Trigger: CATCGTTCTCTTTCTCAACAAGAAGGACCTCTTTGA...TAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGATAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058669.15 |
||
| CDS CAA 72 bp | GGAGGCATGGTCCCCTCCTCGGTGGAGTCAGCCAGGTaGTTGAGCTGTCTCCCGGCATCCGCACAGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGMVPSSVESAR*LSCLPASAQLG Trigger: GCCAAGCTGTGCGGATGCCGGGAGACAGCTCAACAACCTGGCTGACTCCACCGAGGAGGGGACCATGCCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058669.15 ENSMUST00000151326.8 |
||
| CDS TCA 72 bp | GCATGGTCCCCTCCTCGGTGGAGTCAGCCAGGTTGTTaGGCTGTCTCCCGGCATCCGCACAGCTTGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AWSPPRWSQPGC*AVSRHPHSLAL Trigger: CAGAGCCAAGCTGTGCGGATGCCGGGAGACAGCTCAACAACCTGGCTGACTCCACCGAGGAGGGGACCATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058669.15 ENSMUST00000151326.8 |
||
| CDS CAA 72 bp | GGCATGGTCCCCTCCTCGGTGGAGTCAGCCAGGTTGTaGAGCTGTCTCCCGGCATCCGCACAGCTTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GMVPSSVESARL*SCLPASAQLGS Trigger: AGAGCCAAGCTGTGCGGATGCCGGGAGACAGCTCAACAACCTGGCTGACTCCACCGAGGAGGGGACCATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058669.15 ENSMUST00000151326.8 |
||
| CDS CAA 72 bp | GGAGGCATGGTCCCCTCCTCGGTGGAGTCAGCCAGGTaGTTGAGCTGTCTCCCGGCATCCTGTGTAATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GGMVPSSVESAR*LSCLPASCVIQ Trigger: CTGGATTACACAGGATGCCGGGAGACAGCTCAACAACCTGGCTGACTCCACCGAGGAGGGGACCATGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS CAA 72 bp | GGCATGGTCCCCTCCTCGGTGGAGTCAGCCAGGTTGTaGAGCTGTCTCCCGGCATCCTGTGTAATCCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GMVPSSVESARL*SCLPASCVIQK Trigger: TTTCTGGATTACACAGGATGCCGGGAGACAGCTCAACAACCTGGCTGACTCCACCGAGGAGGGGACCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS CAA 90 bp | ACCAACTCAGGAGGCATGGTCCCCTCCTCGGTGGAGTCAGCCAGGTaGTTGAGCTGTCTCCCGGCATCCTGTGTAATCCAGAAATCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TNSGGMVPSSVESAR*LSCLPASCVIQKSD Trigger: GTCAGATTTCTGGATTACACAGGATGCCGGGAGACAGCTCAACAACCTGGCTGACTCCACCGAGGAGGGGACCATGCCTCCTGAGTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS CCA 72 bp | CCTAACACCCGACTCTCCTTGTGGTCTGCCGGTCTCTaGTCTACTTCTTCTCCTGCTTCCACCCTGAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: PNTRLSLWSAGL*STSSPASTLNQ Trigger: CTGGTTCAGGGTGGAAGCAGGAGAAGAAGTAGACCAGAGACCGGCAGACCACAAGGAGAGTCGGGTGTTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS GCA 72 bp | GTCTGTAATCCGGTCCAGCTGGTTCAGGTAGTAAGATaGCGAGTCATTGAGCTGGAACTCTGCAGCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VCNPVQLVQVVR*RVIELELCSSV Trigger: GACAGAGCTGCAGAGTTCCAGCTCAATGACTCGGCATCTTACTACCTGAACCAGCTGGACCGGATTACAGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058669.15 ENSMUST00000131856.3 ENSMUST00000151326.8 |
||
| CDS CAA 90 bp | ACTAAGTGGAAAACATCTTGCGTTGCTCCTAACACCCGACTCTCCTaGTGGTCTGCCGGTCTCTGGTCTACTTCTTCTCCTGCTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: TKWKTSCVAPNTRLS*WSAGLWSTSSPAST Trigger: GGTGGAAGCAGGAGAAGAAGTAGACCAGAGACCGGCAGACCACAAGGAGAGTCGGGTGTTAGGAGCAACGCAAGATGTTTTCCACTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS CAA 72 bp | GGCTCTGGAAACTTACTAAGTGGAAAACATCTTGCGTaGCTCCTAACACCCGACTCTCCTTGTGGTCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSGNLLSGKHLA*LLTPDSPCGLP Trigger: CGGCAGACCACAAGGAGAGTCGGGTGTTAGGAGCAACGCAAGATGTTTTCCACTTAGTAAGTTTCCAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS TCA 72 bp | ACTTCTTCTCCTGCTTCCACCCTGAACCAGATAACATaGATCACGTACCGCACAGCTTGGCTCTGCATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TSSPASTLNQIT*ITYRTAWLCIV Trigger: GACTATGCAGAGCCAAGCTGTGCGGTACGTGATTCATGTTATCTGGTTCAGGGTGGAAGCAGGAGAAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS GCA 72 bp | CTTGTGGTCTGCCGGTCTCTGGTCTACTTCTTCTCCTaGTTCCACCCTGAACCAGATAACATGAATCACGTA | + |
|
Preference number: 6 (lower is better) Translates to: LVVCRSLVYFFS*FHPEPDNMNHV Trigger: TACGTGATTCATGTTATCTGGTTCAGGGTGGAAGCAGGAGAAGAAGTAGACCAGAGACCGGCAGACCACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS GCA 72 bp | GGCAGGCTCTGGAAACTTACTAAGTGGAAAACATCTTaGGTTGCTCCTAACACCCGACTCTCCTTGTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRLWKLTKWKTS*VAPNTRLSLWS Trigger: AGACCACAAGGAGAGTCGGGTGTTAGGAGCAACGCAAGATGTTTTCCACTTAGTAAGTTTCCAGAGCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS CCA 72 bp | AGTGGCTTTCCAGGCAGGCTCTGGAAACTTACTAAGTaGAAAACATCTTGCGTTGCTCCTAACACCCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: SGFPGRLWKLTK*KTSCVAPNTRL Trigger: GAGTCGGGTGTTAGGAGCAACGCAAGATGTTTTCCACTTAGTAAGTTTCCAGAGCCTGCCTGGAAAGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||
| CDS CAA 72 bp | CCTGAACCAGATAACATGAATCACGTACCGCACAGCTaGGCTCTGCATAGTCAATGCCTAGTGTGGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: PEPDNMNHVPHS*ALHSQCLVWTW Trigger: CCATGTCCACACTAGGCATTGACTATGCAGAGCCAAGCTGTGCGGTACGTGATTCATGTTATCTGGTTCAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131856.3 |
||