Pregenerated sensors for GNAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034837Ensembl transcript IDs: ENSMUST00000010205.9, ENSMUST00000192271.6
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCAGTGCAGCCAGGCGGTGAAAAGCAGGGTCGAGTTGGGTACTTaGGGGAGGGTCTGCACTGCAAGCCTCATGCCTTTGGGTGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: GQCSQAVKSRVELGT*GRVCTASLMPLGVW Trigger: CCACACACCCAAAGGCATGAGGCTTGCAGTGCAGACCCTCCCCCAAGTACCCAACTCGACCCTGCTTTTCACCGCCTGGCTGCACTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 90 bp | AGGCTACTGGGAGGGACAGTCACTAACCACTGGGTGGACACGTGTTaGACTTGTCATATGCAGGTAGCAGGCTGGACCGGCCTACTGCTT | + |
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Preference number: 1 (lower is better) Translates to: RLLGGTVTNHWVDTC*TCHMQVAGWTGLLL Trigger: AAGCAGTAGGCCGGTCCAGCCTGCTACCTGCATATGACAAGTCCAACACGTGTCCACCCAGTGGTTAGTGACTGTCCCTCCCAGTAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR TCA 90 bp | GGGTGTGTGGCTACAAGAGCAGCAGCTTGTGGAAAGGACGGTATTTaGGGGGACTACAGGGCTACAGGGCTGCAGGGCTACAGAATCTCA | + |
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Preference number: 1 (lower is better) Translates to: GCVATRAAACGKDGI*GDYRATGLQGYRIS Trigger: TGAGATTCTGTAGCCCTGCAGCCCTGTAGCCCTGTAGTCCCCTCAAATACCGTCCTTTCCACAAGCTGCTGCTCTTGTAGCCACACACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR TCA 90 bp | TTGGACTTGTCATATGCAGGTAGCAGGCTGGACCGGCCTACTGCTTaGGGGAGGGATACCTCAAGTCCTTCGTGGAAACTGGTGAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: LDLSYAGSRLDRPTA*GRDTSSPSWKLVRE Trigger: CTCCCTCACCAGTTTCCACGAAGGACTTGAGGTATCCCTCCCTCAAGCAGTAGGCCGGTCCAGCCTGCTACCTGCATATGACAAGTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 90 bp | GACTTTGGAGTCCTCAGGCTACTGGGAGGGACAGTCACTAACCACTaGGTGGACACGTGTTGGACTTGTCATATGCAGGTAGCAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: DFGVLRLLGGTVTNH*VDTCWTCHMQVAGW Trigger: CCAGCCTGCTACCTGCATATGACAAGTCCAACACGTGTCCACCCAGTGGTTAGTGACTGTCCCTCCCAGTAGCCTGAGGACTCCAAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 90 bp | GAAGTGTCCAAGGACAGAGGGGCAAGACCCAGAGGGAGAAGGGACTaGAGAAACCCTGAGTCTGATGTTCGGGAATGGGTTTGGCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: EVSKDRGARPRGRRD*RNPESDVREWVWLV Trigger: CACAAGCCAAACCCATTCCCGAACATCAGACTCAGGGTTTCTCCAGTCCCTTCTCCCTCTGGGTCTTGCCCCTCTGTCCTTGGACACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR TCA 90 bp | TCACCAGACGCTCTAGGTCTGAGAGATAGTAGCCGGCGGAGTCATTaGGCTGGTATTCTGAGGCTCGGTCAAAGCAAGCTTGGATACCCG | + |
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Preference number: 1 (lower is better) Translates to: SPDALGLRDSSRRSH*AGILRLGQSKLGYP Trigger: CGGGTATCCAAGCTTGCTTTGACCGAGCCTCAGAATACCAGCTCAATGACTCCGCCGGCTACTATCTCTCAGACCTAGAGCGTCTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
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| 3UTR TCA 90 bp | AGTATCTGCCATGTGCATGAGCTTCCGGGCATCATCCTGCCGGGCTaGATCTCCATACTGAATGTTGAGCGTGGTCATAGCCCGAACGAT | + |
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Preference number: 1 (lower is better) Translates to: SICHVHELPGIILPG*ISILNVERGHSPND Trigger: ATCGTTCGGGCTATGACCACGCTCAACATTCAGTATGGAGATTCAGCCCGGCAGGATGATGCCCGGAAGCTCATGCACATGGCAGATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
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| 3UTR GCA 90 bp | GACATCTCCTTGGGCATTGTGCCTTCCTCAATAGTATCTGCCATGTaGATGAGCTTCCGGGCATCATCCTGCCGGGCTGAATCTCCATAC | + |
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Preference number: 1 (lower is better) Translates to: DISLGIVPSSIVSAM*MSFRASSCRAESPY Trigger: GTATGGAGATTCAGCCCGGCAGGATGATGCCCGGAAGCTCATGCACATGGCAGATACTATTGAGGAAGGCACAATGCCCAAGGAGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
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| 3UTR CCA 90 bp | GAGGCTTCAAAAACCAGAGCTTGGACTTTGGAGTCCTCAGGCTACTaGGAGGGACAGTCACTAACCACTGGGTGGACACGTGTTGGACTT | + |
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Preference number: 1 (lower is better) Translates to: EASKTRAWTLESSGY*EGQSLTTGWTRVGL Trigger: AAGTCCAACACGTGTCCACCCAGTGGTTAGTGACTGTCCCTCCCAGTAGCCTGAGGACTCCAAAGTCCAAGCTCTGGTTTTTGAAGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 90 bp | AATACAGCATACCTTGACCAGCCAGCCCTGAGTATTGTGTGTGGGTaGATGAGGTGTGGTGTGGAAGTGTCCAAGGACAGAGGGGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: NTAYLDQPALSIVCG*MRCGVEVSKDRGAR Trigger: TCTTGCCCCTCTGTCCTTGGACACTTCCACACCACACCTCATCCACCCACACACAATACTCAGGGCTGGCTGGTCAAGGTATGCTGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 90 bp | AGAGGGAGAAGGGACTGGAGAAACCCTGAGTCTGATGTTCGGGAATaGGTTTGGCTTGTGTCTTTCTTTCCCTGGCACCCACGTCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: RGRRDWRNPESDVRE*VWLVSFFPWHPRQS Trigger: ACTTTGACGTGGGTGCCAGGGAAAGAAAGACACAAGCCAAACCCATTCCCGAACATCAGACTCAGGGTTTCTCCAGTCCCTTCTCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR TCA 90 bp | GCTCGGTCAAAGCAAGCTTGGATACCCGAGTCCTTCCACAAGCGCTaGATGATGTCTGACATCTCCTTGGGCATTGTGCCTTCCTCAATA | + |
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Preference number: 1 (lower is better) Translates to: ARSKQAWIPESFHKR*MMSDISLGIVPSSI Trigger: TATTGAGGAAGGCACAATGCCCAAGGAGATGTCAGACATCATTCAGCGCTTGTGGAAGGACTCGGGTATCCAAGCTTGCTTTGACCGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
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| 3UTR TCA 90 bp | GGTCATAGCTATGTCAATAATACCCTCCTTCAATACAGCATACCTTaGCCAGCCAGCCCTGAGTATTGTGTGTGGGTGGATGAGGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: GHSYVNNTLLQYSIP*PASPEYCVWVDEVW Trigger: CCACACCTCATCCACCCACACACAATACTCAGGGCTGGCTGGTCAAGGTATGCTGTATTGAAGGAGGGTATTATTGACATAGCTATGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 90 bp | TCAAAGTCACTCACTTCTCTATACGAGGCTTCAAAAACCAGAGCTTaGACTTTGGAGTCCTCAGGCTACTGGGAGGGACAGTCACTAACC | + |
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Preference number: 1 (lower is better) Translates to: SKSLTSLYEASKTRA*TLESSGYWEGQSLT Trigger: GGTTAGTGACTGTCCCTCCCAGTAGCCTGAGGACTCCAAAGTCCAAGCTCTGGTTTTTGAAGCCTCGTATAGAGAAGTGAGTGACTTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 90 bp | GAGTCTGATGTTCGGGAATGGGTTTGGCTTGTGTCTTTCTTTCCCTaGCACCCACGTCAAAGTCACTCACTTCTCTATACGAGGCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: ESDVREWVWLVSFFP*HPRQSHSLLYTRLQ Trigger: TTGAAGCCTCGTATAGAGAAGTGAGTGACTTTGACGTGGGTGCCAGGGAAAGAAAGACACAAGCCAAACCCATTCCCGAACATCAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 90 bp | TCAGGAGGGACAACATGGTCACATGGAATTGCCTGTAACCTCACATaGGATATTCTTTGCCCATGGTTGATCAATAGGGGTTGGACTCTG | + |
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Preference number: 1 (lower is better) Translates to: SGGTTWSHGIACNLT*DILCPWLINRGWTL Trigger: CAGAGTCCAACCCCTATTGATCAACCATGGGCAAAGAATATCCCATGTGAGGTTACAGGCAATTCCATGTGACCATGTTGTCCCTCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CAA 90 bp | GGTCCAAGAGGCCAGTGCAGCCAGGCGGTGAAAAGCAGGGTCGAGTaGGGTACTTGGGGGAGGGTCTGCACTGCAAGCCTCATGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GPRGQCSQAVKSRVE*GTWGRVCTASLMPL Trigger: CAAAGGCATGAGGCTTGCAGTGCAGACCCTCCCCCAAGTACCCAACTCGACCCTGCTTTTCACCGCCTGGCTGCACTGGCCTCTTGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCCTCAGGCTACTGGGAGGGACAGTCACTAACCACTGGGTGGACACGTGTATGGGGATCTGCTGGTaGGCTGCTGCTGCTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GVLRLLGGTVTNHWVDTCMGICW*AAAAAG Trigger: CCCAGCAGCAGCAGCAGCTCACCAGCAGATCCCCAT...ACACGTGTCCACCCAGTGGTTAGTGACTGTCCCTCCCAGTAGCCTGAGGACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CAA 90 bp | AGGGATACCTCAAGTCCTTCGTGGAAACTGGTGAGGGAGGGCTGTTaGTGGAATGGGGATCTGCTGGTGAGCTGCTGCTGCTGCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RDTSSPSWKLVREGC*WNGDLLVSCCCCWG Trigger: CCCCCAGCAGCAGCAGCAGCTCACCAGCAGATCCCCATTCCACAAACAGCCCTCCCTCACCAGTTTCCACGAAGGACTTGAGGTATCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGCCTCTTCCAGGTCCAAGAGGCCAGTaGAGCCAGGCGGTGAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: GGRGCALVLLSRSILPLPGPRGQ*SQAVKS Trigger: GCTTTTCACCGCCTGGCTGCACTGGCCTCTTGGACC...TGGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGCCTCTTCCGTCGAGTTGGGTACTTaGGGGAGGGTCTGCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: GRERLCPSLAVQKHLASSVELGT*GRVCTA Trigger: TGCAGTGCAGACCCTCCCCCAAGTACCCAACTCGAC...GGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CAA 90 bp | TGGGTGTGTGGCTACAAGAGCAGCAGCTTGTGGAAAGGACGGTATTaGAGGGGACTACAGGGCTACAGGGCTGCAGGGCTACAGAATCTC | + |
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Preference number: 2 (lower is better) Translates to: WVCGYKSSSLWKGRY*RGLQGYRAAGLQNL Trigger: GAGATTCTGTAGCCCTGCAGCCCTGTAGCCCTGTAGTCCCCTCAAATACCGTCCTTTCCACAAGCTGCTGCTCTTGTAGCCACACACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR CCA 90 bp | GATGGCAATGAACTCGAGGCATTCCTCCAGCGAATACCCGTCCTGGTGGATAATCTCAACTGTGTCCAGTaGGAAGGAGGAGGCGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: DGNELEAFLQRIPVLVDNLNCVQ*EGGGVP Trigger: TGGGACGCCTCCTCCTTCCCACTGGACACAGTTGAG...ATTATCCACCAGGACGGGTATTCGCTGGAGGAATGCCTCGAGTTCATTGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
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| 3UTR-3UTR CCA 90 bp | TGGAAACTGGTGAGGGAGGGCTGTTTGTGGAATGGGGATCTGCTGGTGAGCTGCAAGAGCAGCAGCTTGTaGAAAGGACGGTATTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: WKLVREGCLWNGDLLVSCKSSSL*KGRYLR Trigger: CCTCAAATACCGTCCTTTCCACAAGCTGCTGCTCTT...GCAGCTCACCAGCAGATCCCCATTCCACAAACAGCCCTCCCTCACCAGTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGCCTCTTCCGTTCGGGAATGGGTTTaGCTTGTGTCTTTCTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GRERLCPSLAVQKHLASSVREWV*LVSFFP Trigger: GGGAAAGAAAGACACAAGCCAAACCCATTCCCGAAC...GGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGCCTCTTCCAGTATTGTGTGTGGGTaGATGAGGTGTGGTGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: GRERLCPSLAVQKHLASSSIVCG*MRCGVE Trigger: TTCCACACCACACCTCATCCACCCACACACAATACT...GGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CAA 90 bp | TCACTCACTTCTCTATACGAGGCTTCAAAAACCAGAGCTTGGACTTaGGAGTCCTCAGGCTACTGGGAGGGACAGTCACTAACCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: SLTSLYEASKTRAWT*ESSGYWEGQSLTTG Trigger: CCCAGTGGTTAGTGACTGTCCCTCCCAGTAGCCTGAGGACTCCAAAGTCCAAGCTCTGGTTTTTGAAGCCTCGTATAGAGAAGTGAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR CCA 90 bp | GGACAACATGGTCACATGGAATTGCCTGTAACCTCACATGGGATATTCTTTGCCGAGTCCTCAGGCTACTaGGAGGGACAGTCACTAACC | + |
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Preference number: 2 (lower is better) Translates to: GQHGHMELPVTSHGIFFAESSGY*EGQSLT Trigger: GGTTAGTGACTGTCCCTCCCAGTAGCCTGAGGACTC...GGCAAAGAATATCCCATGTGAGGTTACAGGCAATTCCATGTGACCATGTTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CAA 90 bp | GTCAAAGTCACTCACTTCTCTATACGAGGCTTCAAAAACCAGAGCTaGGACTTTGGAGTCCTCAGGCTACTGGGAGGGACAGTCACTAAC | + |
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Preference number: 2 (lower is better) Translates to: VKVTHFSIRGFKNQS*DFGVLRLLGGTVTN Trigger: GTTAGTGACTGTCCCTCCCAGTAGCCTGAGGACTCCAAAGTCCAAGCTCTGGTTTTTGAAGCCTCGTATAGAGAAGTGAGTGACTTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CAA 90 bp | GGGGTTGGACTCTGCTCTGAGCCACCCCTCAGCATGGCTTCATTATaGGTCATAGCTATGTCAATAATACCCTCCTTCAATACAGCATAC | + |
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Preference number: 2 (lower is better) Translates to: GVGLCSEPPLSMASL*VIAMSIIPSFNTAY Trigger: GTATGCTGTATTGAAGGAGGGTATTATTGACATAGCTATGACCAATAATGAAGCCATGCTGAGGGGTGGCTCAGAGCAGAGTCCAACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR CCA 90 bp | GGACAACATGGTCACATGGAATTGCCTGTAACCTCACATGGGATATTCTTTGCCATGCCTTTGGGTGTGTaGCTACAAGAGCAGCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: GQHGHMELPVTSHGIFFAMPLGV*LQEQQL Trigger: AAGCTGCTGCTCTTGTAGCCACACACCCAAAGGCAT...GGCAAAGAATATCCCATGTGAGGTTACAGGCAATTCCATGTGACCATGTTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGCCACCCCTCAGCATGGCTTCATTATTGGTCATAGCTATGTCAATAATAACTGCTGAGTCACTGTaGGTTCCAGCTGTCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: SEPPLSMASLLVIAMSIITAESL*VPAVPS Trigger: ACTTGGGACAGCTGGAACTCACAGTGACTCAGCAGT...TATTATTGACATAGCTATGACCAATAATGAAGCCATGCTGAGGGGTGGCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR CAA 90 bp | TGGAAACTGGTGAGGGAGGGCTGTTTGTGGAATGGGGATCTGCTGGTGAGCTGCGGTCGAGTTGGGTACTaGGGGGAGGGTCTGCACTGC | + |
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Preference number: 3 (lower is better) Translates to: WKLVREGCLWNGDLLVSCGRVGY*GEGLHC Trigger: GCAGTGCAGACCCTCCCCCAAGTACCCAACTCGACC...GCAGCTCACCAGCAGATCCCCATTCCACAAACAGCCCTCCCTCACCAGTTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 72 bp | AGCCAGGCGGTGAAAAGCAGGGTCGAGTTGGGTACTTaGGGGAGGGTCTGCACTGCAAGCCTCATGCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SQAVKSRVELGT*GRVCTASLMPL Trigger: CAAAGGCATGAGGCTTGCAGTGCAGACCCTCCCCCAAGTACCCAACTCGACCCTGCTTTTCACCGCCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 72 bp | GGAGGGACAGTCACTAACCACTGGGTGGACACGTGTTaGACTTGTCATATGCAGGTAGCAGGCTGGACCGGC | + |
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Preference number: 3 (lower is better) Translates to: GGTVTNHWVDTC*TCHMQVAGWTG Trigger: GCCGGTCCAGCCTGCTACCTGCATATGACAAGTCCAACACGTGTCCACCCAGTGGTTAGTGACTGTCCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR TCA 72 bp | TTCCGGGCATCATCCTGCCGGGCTGAATCTCCATACTaGATGTTGAGCGTGGTCATAGCCCGAACGATGGCC | + |
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Preference number: 3 (lower is better) Translates to: FRASSCRAESPY*MLSVVIARTMA Trigger: GGCCATCGTTCGGGCTATGACCACGCTCAACATTCAGTATGGAGATTCAGCCCGGCAGGATGATGCCCGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
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| 3UTR GCA 72 bp | AGGACGGTATTTGAGGGGACTACAGGGCTACAGGGCTaGAGGGCTACAGAATCTCAGGGCAAGAGACACACC | + |
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Preference number: 3 (lower is better) Translates to: RTVFEGTTGLQG*RATESQGKRHT Trigger: GGTGTGTCTCTTGCCCTGAGATTCTGTAGCCCTGCAGCCCTGTAGCCCTGTAGTCCCCTCAAATACCGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR CAA 90 bp | GGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGCCTCTTCCAGCAAGCCTCATGCCTTaGGGTGTGTGGCTACAAGAG | + |
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Preference number: 3 (lower is better) Translates to: GGRGCALVLLSRSILPLPASLMP*GVWLQE Trigger: CTCTTGTAGCCACACACCCAAAGGCATGAGGCTTGC...TGGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 72 bp | AGGGTCTGCACTGCAAGCCTCATGCCTTTGGGTGTGTaGCTACAAGAGCAGCAGCTTGTGGAAAGGACGGTA | + |
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Preference number: 3 (lower is better) Translates to: RVCTASLMPLGV*LQEQQLVERTV Trigger: TACCGTCCTTTCCACAAGCTGCTGCTCTTGTAGCCACACACCCAAAGGCATGAGGCTTGCAGTGCAGACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 72 bp | GACACGTGTTGGACTTGTCATATGCAGGTAGCAGGCTaGACCGGCCTACTGCTTGAGGGAGGGATACCTCAA | + |
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Preference number: 3 (lower is better) Translates to: DTCWTCHMQVAG*TGLLLEGGIPQ Trigger: TTGAGGTATCCCTCCCTCAAGCAGTAGGCCGGTCCAGCCTGCTACCTGCATATGACAAGTCCAACACGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 72 bp | AAGGACAGAGGGGCAAGACCCAGAGGGAGAAGGGACTaGAGAAACCCTGAGTCTGATGTTCGGGAATGGGTT | + |
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Preference number: 3 (lower is better) Translates to: KDRGARPRGRRD*RNPESDVREWV Trigger: AACCCATTCCCGAACATCAGACTCAGGGTTTCTCCAGTCCCTTCTCCCTCTGGGTCTTGCCCCTCTGTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR TCA 72 bp | CATGTGCATGAGCTTCCGGGCATCATCCTGCCGGGCTaGATCTCCATACTGAATGTTGAGCGTGGTCATAGC | + |
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Preference number: 3 (lower is better) Translates to: HVHELPGIILPG*ISILNVERGHS Trigger: GCTATGACCACGCTCAACATTCAGTATGGAGATTCAGCCCGGCAGGATGATGCCCGGAAGCTCATGCACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
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| 3UTR CCA 72 bp | TGCCTTTGGGTGTGTGGCTACAAGAGCAGCAGCTTGTaGAAAGGACGGTATTTGAGGGGACTACAGGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: CLWVCGYKSSSL*KGRYLRGLQGY Trigger: GTAGCCCTGTAGTCCCCTCAAATACCGTCCTTTCCACAAGCTGCTGCTCTTGTAGCCACACACCCAAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 72 bp | GTCCTCAGGCTACTGGGAGGGACAGTCACTAACCACTaGGTGGACACGTGTTGGACTTGTCATATGCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: VLRLLGGTVTNH*VDTCWTCHMQV Trigger: TACCTGCATATGACAAGTCCAACACGTGTCCACCCAGTGGTTAGTGACTGTCCCTCCCAGTAGCCTGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR CCA 72 bp | AAAACCAGAGCTTGGACTTTGGAGTCCTCAGGCTACTaGGAGGGACAGTCACTAACCACTGGGTGGACACGT | + |
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Preference number: 3 (lower is better) Translates to: KTRAWTLESSGY*EGQSLTTGWTR Trigger: ACGTGTCCACCCAGTGGTTAGTGACTGTCCCTCCCAGTAGCCTGAGGACTCCAAAGTCCAAGCTCTGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR-3UTR CAA 90 bp | GGGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGCCTCTTCCTACAAGAGCAGCAGCTaGTGGAAAGGACGGTATTTG | + |
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Preference number: 3 (lower is better) Translates to: GRERLCPSLAVQKHLASSYKSSS*WKGRYL Trigger: CAAATACCGTCCTTTCCACAAGCTGCTGCTCTTGTA...GGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
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| 3UTR TCA 72 bp | GCTCTAGGTCTGAGAGATAGTAGCCGGCGGAGTCATTaGGCTGGTATTCTGAGGCTCGGTCAAAGCAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ALGLRDSSRRSH*AGILRLGQSKL Trigger: AAGCTTGCTTTGACCGAGCCTCAGAATACCAGCTCAATGACTCCGCCGGCTACTATCTCTCAGACCTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
||
| 3UTR TCA 72 bp | CCTGGTTTTCAGTTCTCCCTCCTAAGGAATGGGCCCTaGATCAGGAGGGACAACATGGTCACATGGAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: PGFQFSLLRNGP*IRRDNMVTWNC Trigger: GCAATTCCATGTGACCATGTTGTCCCTCCTGATTCAGGGCCCATTCCTTAGGAGGGAGAACTGAAAACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR TCA 72 bp | AAGCTTGGATACCCGAGTCCTTCCACAAGCGCTGAATaGTGTCTGACATCTCCTTGGGCATTGTGCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KLGYPSPSTSAE*CLTSPWALCLP Trigger: AGGAAGGCACAATGCCCAAGGAGATGTCAGACATCATTCAGCGCTTGTGGAAGGACTCGGGTATCCAAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
||
| 3UTR TCA 72 bp | AAGCAAGCTTGGATACCCGAGTCCTTCCACAAGCGCTaGATGATGTCTGACATCTCCTTGGGCATTGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KQAWIPESFHKR*MMSDISLGIVP Trigger: AGGCACAATGCCCAAGGAGATGTCAGACATCATTCAGCGCTTGTGGAAGGACTCGGGTATCCAAGCTTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
||
| 3UTR CCA 72 bp | CTCACTTCTCTATACGAGGCTTCAAAAACCAGAGCTTaGACTTTGGAGTCCTCAGGCTACTGGGAGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LTSLYEASKTRA*TLESSGYWEGQ Trigger: CTGTCCCTCCCAGTAGCCTGAGGACTCCAAAGTCCAAGCTCTGGTTTTTGAAGCCTCGTATAGAGAAGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR CCA 72 bp | TGGAGAAACCCTGAGTCTGATGTTCGGGAATGGGTTTaGCTTGTGTCTTTCTTTCCCTGGCACCCACGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: WRNPESDVREWV*LVSFFPWHPRQ Trigger: TTGACGTGGGTGCCAGGGAAAGAAAGACACAAGCCAAACCCATTCCCGAACATCAGACTCAGGGTTTCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR CCA 72 bp | TGGTCCACAGGCTTAAGCAAAGGTTGTAGAAGTGGCTaGGGGTTGGGGGACATTGTCTCTAATGGTTTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WSTGLSKGCRSG*GLGDIVSNGLG Trigger: GCCTAAACCATTAGAGACAATGTCCCCCAACCCCCAGCCACTTCTACAACCTTTGCTTAAGCCTGTGGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR TCA 72 bp | TATGTCAATAATACCCTCCTTCAATACAGCATACCTTaGCCAGCCAGCCCTGAGTATTGTGTGTGGGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: YVNNTLLQYSIP*PASPEYCVWVD Trigger: ATCCACCCACACACAATACTCAGGGCTGGCTGGTCAAGGTATGCTGTATTGAAGGAGGGTATTATTGACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAGCCACCCCTCAGCATGGCTTCATTATTGGTCATAGCTATGTCAATAATATTCAAAAACCAGAGCTaGGACTTTGGAGTCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SEPPLSMASLLVIAMSIIFKNQS*DFGVLR Trigger: CCTGAGGACTCCAAAGTCCAAGCTCTGGTTTTTGAA...TATTATTGACATAGCTATGACCAATAATGAAGCCATGCTGAGGGGTGGCTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR CCA 72 bp | ACAACATGGTCACATGGAATTGCCTGTAACCTCACATaGGATATTCTTTGCCCATGGTTGATCAATAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TTWSHGIACNLT*DILCPWLINRG Trigger: ACCCCTATTGATCAACCATGGGCAAAGAATATCCCATGTGAGGTTACAGGCAATTCCATGTGACCATGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR CAA 72 bp | CAGCCAGGCGGTGAAAAGCAGGGTCGAGTTGGGTACTaGGGGGAGGGTCTGCACTGCAAGCCTCATGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QPGGEKQGRVGY*GEGLHCKPHAF Trigger: AAAGGCATGAGGCTTGCAGTGCAGACCCTCCCCCAAGTACCCAACTCGACCCTGCTTTTCACCGCCTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTAGGTCCAAGAGGCCAGTGCAGCCAGGCGGTGAAAAGCAGGGTCGAGTTGTATCTGCCATGTGCATaGGCTTCCGGGCATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVGPRGQCSQAVKSRVELYLPCA*ASGHHP Trigger: AGGATGATGCCCGGAAGCTCATGCACATGGCAGATA...CAACTCGACCCTGCTTTTCACCGCCTGGCTGCACTGGCCTCTTGGACCTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR GCA 90 bp | CCGGATTCACCGGCACATCAGTTAAGGGACCTCAACTGTGTCCAGTGGGAAGGATCCAGCTCTCTGGAGTaGTTCTCCTCAGCGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PDSPAHQLRDLNCVQWEGSSSLE*FSSALA Trigger: GGCCAGCGCTGAGGAGAAGCACTCCAGAGAGCTGGA...TCCTTCCCACTGGACACAGTTGAGGTCCCTTAACTGATGTGCCGGTGAATCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
||
| CDS-3UTR TCA 90 bp | TCCTTCGTGGAAACTGGTGAGGGAGGGCTGTTTGTGGAATGGGGATCTGCTGGTAGCCGGCGGAGTCATTaGGCTGGTATTCTGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFVETGEGGLFVEWGSAGSRRSH*AGILRL Trigger: GAGCCTCAGAATACCAGCTCAATGACTCCGCCGGCT...ACCAGCAGATCCCCATTCCACAAACAGCCCTCCCTCACCAGTTTCCACGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGCCTCTTCCAGGTGCAGGCTCTCGTaGATTCGGTTCACTTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GRERLCPSLAVQKHLASSRCRLS*IRFTSS Trigger: CGACGAAGTGAACCGAATGCACGAGAGCCTGCACCT...GGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAACTGGTGAGGGAGGGCTGTTTGTGGAATGGGGATCTGCTGGTGAGCTGCTCTTCTCCAGCTCTCTaGAGTGCTTCTCCTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WKLVREGCLWNGDLLVSCSSPAL*SASPQR Trigger: GCGCTGAGGAGAAGCACTCCAGAGAGCTGGAGAAGA...GCAGCTCACCAGCAGATCCCCATTCCACAAACAGCCCTCCCTCACCAGTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR CAA 72 bp | TCAAGTCCTTCGTGGAAACTGGTGAGGGAGGGCTGTTaGTGGAATGGGGATCTGCTGGTGAGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSWKLVREGC*WNGDLLVSCCC Trigger: GCAGCAGCAGCTCACCAGCAGATCCCCATTCCACAAACAGCCCTCCCTCACCAGTTTCCACGAAGGACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR CAA 72 bp | AGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTaGCCTCTTCCAGCAGCACTGGCTCTGGTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGCALVLLSRSI*PLPAALALVHR Trigger: CCTGTGGACCAGAGCCAGTGCTGCTGGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR TCA 90 bp | ACTACAGGGCTACAGGGCTGCAGGGCTACAGAATCTCAGGGCAAGAGACACACCGATTGCAGATGCTGTTaGACAGGTGCAGGCTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TTGLQGCRATESQGKRHTDCRCC*TGAGSR Trigger: ACGAGAGCCTGCACCTGTTCAACAGCATCTGCAATC...GGTGTGTCTCTTGCCCTGAGATTCTGTAGCCCTGCAGCCCTGTAGCCCTGTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGCCTCTTCCAGAACGATGGCCAGGATaGACTGCAGAGTGTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GGRGCALVLLSRSILPLPERWPG*TAECCR Trigger: ACGGCAACACTCTGCAGTCCATCCTGGCCATCGTTC...TGGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CCA 90 bp | CTACAGGGCTACAGGGCTGCAGGGCTACAGAATCTCAGGGCAAGAGACACACCTCGGTCAAAGCAAGCTTaGATACCCGAGTCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQGYRAAGLQNLRARDTPRSKQA*IPESFH Trigger: GTGGAAGGACTCGGGTATCCAAGCTTGCTTTGACCG...AGGTGTGTCTCTTGCCCTGAGATTCTGTAGCCCTGCAGCCCTGTAGCCCTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CCA 90 bp | CTACAGGGCTACAGGGCTGCAGGGCTACAGAATCTCAGGGCAAGAGACACACCTGCGGAGTCATTGAGCTaGTATTCTGAGGCTCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQGYRAAGLQNLRARDTPAESLS*YSEARS Trigger: TGACCGAGCCTCAGAATACCAGCTCAATGACTCCGC...AGGTGTGTCTCTTGCCCTGAGATTCTGTAGCCCTGCAGCCCTGTAGCCCTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CCA 90 bp | CCGGCACATCAGTTAAGGGACCTCAACTGTGTCCAGTGGGAAGGAGGAGGCGTCATCCCAGCAACCACATaGTGGCTCACAACCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PAHQLRDLNCVQWEGGGVIPATT*WLTTIC Trigger: ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT...GACGCCTCCTCCTTCCCACTGGACACAGTTGAGGTCCCTTAACTGATGTGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
||
| 3UTR CAA 72 bp | CAGCTAGCTAAGGGAGGGAGAGGTTGTGCCCTAGTCTaGCTGTCCAGAAGCATCTTGCCTCTTCCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLAKGGRGCALV*LSRSILPLPAA Trigger: TGCTGCTGGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCCCTTAGCTAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR CAA 72 bp | TCATGCCTTTGGGTGTGTGGCTACAAGAGCAGCAGCTaGTGGAAAGGACGGTATTTGAGGGGACTACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCLWVCGYKSSS*WKGRYLRGLQG Trigger: GCCCTGTAGTCCCCTCAAATACCGTCCTTTCCACAAGCTGCTGCTCTTGTAGCCACACACCCAAAGGCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR GCA 90 bp | GATTCACCGGCACATCAGTTAAGGGACCTCAACTGTGTCCAGTGGGAAGGAGGAGCAGCAGTTTCACAGTaGGGGCATCCTTCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSPAHQLRDLNCVQWEGGAAVSQ*GHPSQH Trigger: ATGCTGAGAAGGATGCCCGCACTGTGAAACTGCTGC...TCCTCCTTCCCACTGGACACAGTTGAGGTCCCTTAACTGATGTGCCGGTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
||
| CDS-3UTR CCA 90 bp | TCGGTCAAAGCAAGCTTGGATACCCGAGTCCTTCCACAAGCGCTGAATGATGTCTCTTCTCCAGCTCTCTaGAGTGCTTCTCCTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SVKASLDTRVLPQALNDVSSPAL*SASPQR Trigger: GCGCTGAGGAGAAGCACTCCAGAGAGCTGGAGAAGA...GACATCATTCAGCGCTTGTGGAAGGACTCGGGTATCCAAGCTTGCTTTGACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGCCTCTTCCGCTGAATCTCCATACTaGATGTTGAGCGTGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GRERLCPSLAVQKHLASSAESPY*MLSVVI Trigger: TATGACCACGCTCAACATTCAGTATGGAGATTCAGC...GGAAGAGGCAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR GCA 90 bp | CTACAGGGCTACAGGGCTGCAGGGCTACAGAATCTCAGGGCAAGAGACACACCTTTCCTCAATAGTATCTaGCATGTGCATGAGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LQGYRAAGLQNLRARDTPFLNSI*HVHELP Trigger: CGGAAGCTCATGCACATGGCAGATACTATTGAGGAA...AGGTGTGTCTCTTGCCCTGAGATTCTGTAGCCCTGCAGCCCTGTAGCCCTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAACTGGTGAGGGAGGGCTGTTTGTGGAATGGGGATCTGCTGGTGAGCTGCAGCGAATACCCGTCCTaGTGGATAATCTTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WKLVREGCLWNGDLLVSCSEYPS*WIIFIC Trigger: ACAGATGAAGATTATCCACCAGGACGGGTATTCGCT...GCAGCTCACCAGCAGATCCCCATTCCACAAACAGCCCTCCCTCACCAGTTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR GCA 90 bp | TCAATAATACCCTCCTTCAATACAGCATACCTTGACCAGCCAGCCCTGAGTATTTCCAGCTCTCTGGAGTaGTTCTCCTCAGCGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SIIPSFNTAYLDQPALSISSSLE*FSSALA Trigger: GGCCAGCGCTGAGGAGAAGCACTCCAGAGAGCTGGA...AATACTCAGGGCTGGCTGGTCAAGGTATGCTGTATTGAAGGAGGGTATTATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR GCA 90 bp | CTAGCTAAGGGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGATAGTATCTGCCATGTaGATGAGCTTCCGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LAKGGRGCALVLLSRSILIVSAM*MSFRAS Trigger: TGATGCCCGGAAGCTCATGCACATGGCAGATACTAT...CAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCCCTTAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CCA 90 bp | AGACGGGTCACTAGGGCACTGCTGAGTCACTGTGAGTTCCAGCTGTCCCAAGTCGAATACCCGTCCTGGTaGATAATCTTCATCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRVTRALLSHCEFQLSQVEYPSW*IIFICL Trigger: CAAACAGATGAAGATTATCCACCAGGACGGGTATTC...GACTTGGGACAGCTGGAACTCACAGTGACTCAGCAGTGCCCTAGTGACCCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCTAAGGGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGTGTCTGACATCTCCTTaGGCATTGTGCCTTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAKGGRGCALVLLSRSILCLTSP*ALCLPQ Trigger: TTGAGGAAGGCACAATGCCCAAGGAGATGTCAGACA...CAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCCCTTAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CCA 90 bp | GATGGCAATGAACTCGAGGCATTCCTCCAGCGAATACCCGTCCTGGTGGATAATCCAGCAACCACATGGTaGCTCACAACCATCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DGNELEAFLQRIPVLVDNPATTW*LTTICN Trigger: GTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGG...ATTATCCACCAGGACGGGTATTCGCTGGAGGAATGCCTCGAGTTCATTGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192271.6 |
||
| 3UTR CAA 72 bp | TCTCTATACGAGGCTTCAAAAACCAGAGCTTGGACTTaGGAGTCCTCAGGCTACTGGGAGGGACAGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SLYEASKTRAWT*ESSGYWEGQSL Trigger: TAGTGACTGTCCCTCCCAGTAGCCTGAGGACTCCAAAGTCCAAGCTCTGGTTTTTGAAGCCTCGTATAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR CAA 72 bp | ACTCACTTCTCTATACGAGGCTTCAAAAACCAGAGCTaGGACTTTGGAGTCCTCAGGCTACTGGGAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: THFSIRGFKNQS*DFGVLRLLGGT Trigger: TGTCCCTCCCAGTAGCCTGAGGACTCCAAAGTCCAAGCTCTGGTTTTTGAAGCCTCGTATAGAGAAGTGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR GCA 90 bp | GGACAACATGGTCACATGGAATTGCCTGTAACCTCACATGGGATATTCTTTGCCGCAGCAGTTTCACAGTaGGGGCATCCTTCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQHGHMELPVTSHGIFFAAAVSQ*GHPSQH Trigger: ATGCTGAGAAGGATGCCCGCACTGTGAAACTGCTGC...GGCAAAGAATATCCCATGTGAGGTTACAGGCAATTCCATGTGACCATGTTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR TCA 90 bp | AATCAGGAGGGACAACATGGTCACATGGAATTGCCTGTAACCTCACATGGGATATCCACAAGCGCTGAATaGTGTCTGACATCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQEGQHGHMELPVTSHGISTSAE*CLTSPW Trigger: CCAAGGAGATGTCAGACATCATTCAGCGCTTGTGGA...TATCCCATGTGAGGTTACAGGCAATTCCATGTGACCATGTTGTCCCTCCTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR TCA 90 bp | TCAATAATACCCTCCTTCAATACAGCATACCTTGACCAGCCAGCCCTGAGTATTCCAGGAACTGCACTTTaGTGTAGTTGCCGGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIIPSFNTAYLDQPALSIPGTAL*CSCRHP Trigger: AGGATGCCGGCAACTACATCAAAGTGCAGTTCCTGG...AATACTCAGGGCTGGCTGGTCAAGGTATGCTGTATTGAAGGAGGGTATTATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| 3UTR CAA 72 bp | CTCTGCTCTGAGCCACCCCTCAGCATGGCTTCATTATaGGTCATAGCTATGTCAATAATACCCTCCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCSEPPLSMASL*VIAMSIIPSFN Trigger: ATTGAAGGAGGGTATTATTGACATAGCTATGACCAATAATGAAGCCATGCTGAGGGGTGGCTCAGAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR TCA 90 bp | TCAATAATACCCTCCTTCAATACAGCATACCTTGACCAGCCAGCCCTGAGTATTTCCTTGAAGGAGAATTaGGTCTCGATAATACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIIPSFNTAYLDQPALSISLKEN*VSIIPV Trigger: CACTGGTATTATCGAGACTCAATTCTCCTTCAAGGA...AATACTCAGGGCTGGCTGGTCAAGGTATGCTGTATTGAAGGAGGGTATTATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CAA 90 bp | AGACGGGTCACTAGGGCACTGCTGAGTCACTGTGAGTTCCAGCTGTCCCAAGTCTCGGTCAAAGCAAGCTaGGATACCCGAGTCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRVTRALLSHCEFQLSQVSVKAS*DTRVLP Trigger: TGGAAGGACTCGGGTATCCAAGCTTGCTTTGACCGA...GACTTGGGACAGCTGGAACTCACAGTGACTCAGCAGTGCCCTAGTGACCCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CAA 90 bp | AGACGGGTCACTAGGGCACTGCTGAGTCACTGTGAGTTCCAGCTGTCCCAAGTCTCGAACATTCTGAAGTaGAGGTCCTTGAAGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RRVTRALLSHCEFQLSQVSNILK*RSLKEN Trigger: ATTCTCCTTCAAGGACCTCAACTTCAGAATGTTCGA...GACTTGGGACAGCTGGAACTCACAGTGACTCAGCAGTGCCCTAGTGACCCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CAA 90 bp | CTAGCTAAGGGAGGGAGAGGTTGTGCCCTAGTCTTGCTGTCCAGAAGCATCTTGTCTTTGAGGTTCTCCTaGATGATAATGTCGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LAKGGRGCALVLLSRSILSLRFS*MIMSVT Trigger: TGTCACCGACATTATCATCAAGGAGAACCTCAAAGA...CAAGATGCTTCTGGACAGCAAGACTAGGGCACAACCTCTCCCTCCCTTAGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CAA 90 bp | GGACAACATGGTCACATGGAATTGCCTGTAACCTCACATGGGATATTCTTTGCCATGTCTGACATCTCCTaGGGCATTGTGCCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GQHGHMELPVTSHGIFFAMSDIS*GIVPSS Trigger: TGAGGAAGGCACAATGCCCAAGGAGATGTCAGACAT...GGCAAAGAATATCCCATGTGAGGTTACAGGCAATTCCATGTGACCATGTTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CAA 90 bp | GGACAACATGGTCACATGGAATTGCCTGTAACCTCACATGGGATATTCTTTGCCAAGAGCCCGCAGTCTTaGAGGTTCTCCTTGATGATA | + |
|
Preference number: 5 (lower is better) Translates to: GQHGHMELPVTSHGIFFAKSPQS*RFSLMI Trigger: TATCATCAAGGAGAACCTCAAAGACTGCGGGCTCTT...GGCAAAGAATATCCCATGTGAGGTTACAGGCAATTCCATGTGACCATGTTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||
| CDS-3UTR CAA 90 bp | AATCAGGAGGGACAACATGGTCACATGGAATTGCCTGTAACCTCACATGGGATAGAGAAAACGTCCTTCTaGTTGAGGAAGAGCACGATA | + |
|
Preference number: 5 (lower is better) Translates to: NQEGQHGHMELPVTSHGIEKTSF*LRKSTI Trigger: TATCGTGCTCTTCCTCAACAAGAAGGACGTTTTCTC...TATCCCATGTGAGGTTACAGGCAATTCCATGTGACCATGTTGTCCCTCCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010205.9 |
||