Pregenerated sensors for GNAQ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024639Ensembl transcript IDs: ENSMUST00000025541.6
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGTTTAAAGGGCAAGGGTGGAAGGACGCGGCCGGTACGTGGCCTTaGGAAGCAAGGACTTCTTCCCAGCCTGTGCCCTCACACCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: WFKGQGWKDAAGTWP*EARTSSQPVPSHPD Trigger: GTCAGGGTGTGAGGGCACAGGCTGGGAAGAAGTCCTTGCTTCTCAAGGCCACGTACCGGCCGCGTCCTTCCACCCTTGCCCTTTAAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CCA 90 bp | CTGGCAGCAGCTGCTGGGGAATGTAGTGTCTGTTGGCGTATCATTTaGCATCTGTGGTTTAAAGGGCAAGGGTGGAAGGACGCGGCCGGT | + |
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Preference number: 1 (lower is better) Translates to: LAAAAGECSVCWRII*HLWFKGQGWKDAAG Trigger: ACCGGCCGCGTCCTTCCACCCTTGCCCTTTAAACCACAGATGCCAAATGATACGCCAACAGACACTACATTCCCCAGCAGCTGCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CCA 90 bp | GACCTCACGACAAACCACACAGGGAGCTTTTCTACACTGCTCGTCTaGACACTGGCATTGACCTTAAGGGCAAAGAAAAGAACGGACCAT | + |
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Preference number: 1 (lower is better) Translates to: DLTTNHTGSFSTLLV*TLALTLRAKKRTDH Trigger: ATGGTCCGTTCTTTTCTTTGCCCTTAAGGTCAATGCCAGTGTCCAGACGAGCAGTGTAGAAAAGCTCCCTGTGTGGTTTGTCGTGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR GCA 90 bp | CCCCAAGCCCCCAAGTTCCAGGTGTTCTTTAAATATCGCCGTGGATaGCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATT | + |
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Preference number: 1 (lower is better) Translates to: PQAPKFQVFFKYRRG*HLPVNNIRRLLRRI Trigger: AATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCATCCACGGCGATATTTAAAGAACACCTGGAACTTGGGGGCTTGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CCA 90 bp | CCCTCACACCCTGACCTCCATCCATTTCTCTTAACAATCCTGCTGTaGCTGAAGGTCTGCACCCAAAAGATACGACTCTTGATCATCAAT | + |
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Preference number: 1 (lower is better) Translates to: PSHPDLHPFLLTILL*LKVCTQKIRLLIIN Trigger: ATTGATGATCAAGAGTCGTATCTTTTGGGTGCAGACCTTCAGCCACAGCAGGATTGTTAAGAGAAATGGATGGAGGTCAGGGTGTGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CCA 90 bp | TTTCACTTCATTCGTTCTTTTGAGAAACTGAGAACAAAGGGGCGCTaGGGTCATCTGAGGGAATCTGAGTCTTGCGGTGTCTTGTTATGC | + |
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Preference number: 1 (lower is better) Translates to: FHFIRSFEKLRTKGR*GHLRESESCGVLLC Trigger: GCATAACAAGACACCGCAAGACTCAGATTCCCTCAGATGACCCCAGCGCCCCTTTGTTCTCAGTTTCTCAAAAGAACGAATGAAGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CAA 90 bp | GTCCTGACTACGTCACTCGATGGGAGAAACTGCCCAAGAATGGGATaGGGGGAAACTGGCCAAGAATGGGATTGGGGGCAAGGCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: VLTTSLDGRNCPRMG*GETGQEWDWGQGHG Trigger: ACCATGGCCTTGCCCCCAATCCCATTCTTGGCCAGTTTCCCCCAATCCCATTCTTGGGCAGTTTCTCCCATCGAGTGACGTAGTCAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTACTCAGGACGCCGGTACGTGGCCTTaGGAAGCAAGGACTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ASKQYTQAPKKNFPATQDAGTWP*EARTSS Trigger: GGAAGAAGTCCTTGCTTCTCAAGGCCACGTACCGGC...GTCCTGAGTAGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTGAACACCTATGCTCCTaGCTTCAGCAGACCCACGGG | + |
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Preference number: 2 (lower is better) Translates to: MPPASKQYTQAPKKNFPAEHLCS*LQQTHG Trigger: CCCGTGGGTCTGCTGAAGGCAGGAGCATAGGTGTTC...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR CCA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTGCTACAAGAGGGCTCTaGCAGCAGCTGCTGGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: MPPASKQYTQAPKKNFPAATRGL*QQLLGN Trigger: ATTCCCCAGCAGCTGCTGCCAGAGCCCTCTTGTAGC...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTTCCGTGTTCATACAGTaGGCTGGTCACTCTCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: MPPASKQYTQAPKKNFPASVFIQ*AGHSPS Trigger: GCTGGGAGAGTGACCAGCTCACTGTATGAACACGGA...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTCTTACTCAGCAGCTCTaGGCTTGGTATCAGCACGGC | + |
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Preference number: 2 (lower is better) Translates to: MPPASKQYTQAPKKNFPALTQQL*AWYQHG Trigger: GCCGTGCTGATACCAAGCTCAGAGCTGCTGAGTAAG...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTATGCACCCCAGGATGTaGAGTGAGGCCAGACTTCAA | + |
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Preference number: 2 (lower is better) Translates to: MPPASKQYTQAPKKNFPAMHPRM*SEARLQ Trigger: TTGAAGTCTGGCCTCACTGCACATCCTGGGGTGCAT...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR CCA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTGAAACTGGCCAAGAATaGGATTGGGGGCAAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: MPPASKQYTQAPKKNFPAETGQE*DWGQGH Trigger: ATGGCCTTGCCCCCAATCCCATTCTTGGCCAGTTTC...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTCTGTGGCTGAAGGTCTaGACCCAAAAGATACGACTC | + |
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Preference number: 2 (lower is better) Translates to: MPPASKQYTQAPKKNFPALWLKV*TQKIRL Trigger: GAGTCGTATCTTTTGGGTGCAGACCTTCAGCCACAG...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTGGCACAGTTTGCATCTaGGGACAAATTGCACATGGA | + |
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Preference number: 2 (lower is better) Translates to: MPPASKQYTQAPKKNFPAGTVCI*GQIAHG Trigger: TCCATGTGCAATTTGTCCGCAGATGCAAACTGTGCC...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTACTCAGGACGACTACGTCACTCGATaGGAGAAACTGCCCAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: ASKQYTQAPKKNFPATQDDYVTR*EKLPKN Trigger: ATTCTTGGGCAGTTTCTCCCATCGAGTGACGTAGTC...GTCCTGAGTAGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTACTCAGGACTTAACAATCCTGCTGTaGCTGAAGGTCTGCACCCAA | + |
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Preference number: 2 (lower is better) Translates to: ASKQYTQAPKKNFPATQDLTILL*LKVCTQ Trigger: TTGGGTGCAGACCTTCAGCCACAGCAGGATTGTTAA...GTCCTGAGTAGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTACTCAGGACCAGGAGAGTAACACATaGGAGCACTTCATTACCAGT | + |
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Preference number: 2 (lower is better) Translates to: ASKQYTQAPKKNFPATQDQESNT*EHFITS Trigger: ACTGGTAATGAAGTGCTCTCATGTGTTACTCTCCTG...GTCCTGAGTAGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCTTGGCAGATTCACTCGAACGTAAGGAGAATAAAGAGCTAATGAAACTAGGGATTGGGGGAAACTaGCCAAGAATGGGATTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VFLADSLERKENKELMKLGIGGN*PRMGLG Trigger: CCCCAATCCCATTCTTGGCCAGTTTCCCCCAATCCC...TAGTTTCATTAGCTCTTTATTCTCCTTACGTTCGAGTGAATCTGCCAAGAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR GCA 90 bp | GCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTACTCAGGACCATCTGCGGACAAATTaGACATGGAGAATTCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ASKQYTQAPKKNFPATQDHLRTN*TWRIPN Trigger: GTTTGGAATTCTCCATGTGCAATTTGTCCGCAGATG...GTCCTGAGTAGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTCGGATGGTGTGTGTTTaGTATGAAATTACCTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: MPPASKQYTQAPKKNFPARMVCV*YEITFG Trigger: CCCAAAGGTAATTTCATAGCAAACACACACCATCCG...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTACTCAGGACTTAATGCTGACATTTTaGGACACTGGCTTTTACTGT | + |
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Preference number: 2 (lower is better) Translates to: ASKQYTQAPKKNFPATQDLMLTF*DTGFYC Trigger: ACAGTAAAAGCCAGTGTCTCAAAATGTCAGCATTAA...GTCCTGAGTAGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCTTGGCAGATTCACTCGAACGTAAGGAGAATAAAGAGCTAATGAAACTAAAGCAGCAGTTCAGTTaGCAACTGTTTGGCAATGTG | + |
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Preference number: 2 (lower is better) Translates to: VFLADSLERKENKELMKLKQQFS*QLFGNV Trigger: CACATTGCCAAACAGTTGCCAACTGAACTGCTGCTT...TAGTTTCATTAGCTCTTTATTCTCCTTACGTTCGAGTGAATCTGCCAAGAACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR TCA 90 bp | GTGTTCTTGGCAGATTCACTCGAACGTAAGGAGAATAAAGAGCTAATGAAACTAGAGAGAGAACACGAATaGCAGGAGTGCTTTTATACT | + |
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Preference number: 2 (lower is better) Translates to: VFLADSLERKENKELMKLEREHE*QECFYT Trigger: AGTATAAAAGCACTCCTGTCATTCGTGTTCTCTCTC...TAGTTTCATTAGCTCTTTATTCTCCTTACGTTCGAGTGAATCTGCCAAGAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR TCA 72 bp | GGGCAAGGGTGGAAGGACGCGGCCGGTACGTGGCCTTaGGAAGCAAGGACTTCTTCCCAGCCTGTGCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: GQGWKDAAGTWP*EARTSSQPVPS Trigger: TGAGGGCACAGGCTGGGAAGAAGTCCTTGCTTCTCAAGGCCACGTACCGGCCGCGTCCTTCCACCCTTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR TCA 72 bp | AAGAAGGGACTCTGTCATGCACCCCAGGATGTGCAGTaGGGCCAGACTTCAACTCTGTGCAGCAGCAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: KKGLCHAPQDVQ*GQTSTLCSSKL Trigger: CAGCTTGCTGCTGCACAGAGTTGAAGTCTGGCCTCACTGCACATCCTGGGGTGCATGACAGAGTCCCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CCA 72 bp | CGTCACTCGATGGGAGAAACTGCCCAAGAATGGGATTaGGGGAAACTGGCCAAGAATGGGATTGGGGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: RHSMGETAQEWD*GKLAKNGIGGK Trigger: CTTGCCCCCAATCCCATTCTTGGCCAGTTTCCCCCAATCCCATTCTTGGGCAGTTTCTCCCATCGAGTGACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR TCA 72 bp | GAGAACAAAGGGGCGCTGGGGTCATCTGAGGGAATCTaGGTCTTGCGGTGTCTTGTTATGCAGCCCTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: ENKGALGSSEGI*VLRCLVMQPFL Trigger: AAGAAAGGGCTGCATAACAAGACACCGCAAGACTCAGATTCCCTCAGATGACCCCAGCGCCCCTTTGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR CAA 90 bp | GCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTACTCAGGACTCAGCAGCTCTGAGCTaGGTATCAGCACGGCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: ASKQYTQAPKKNFPATQDSAALS*VSARLS Trigger: GCTGAGCCGTGCTGATACCAAGCTCAGAGCTGCTGA...GTCCTGAGTAGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CCA 72 bp | ATTCGTTCTTTTGAGAAACTGAGAACAAAGGGGCGCTaGGGTCATCTGAGGGAATCTGAGTCTTGCGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: IRSFEKLRTKGR*GHLRESESCGV Trigger: GACACCGCAAGACTCAGATTCCCTCAGATGACCCCAGCGCCCCTTTGTTCTCAGTTTCTCAAAAGAACGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR GCA 72 bp | CCCAAGTTCCAGGTGTTCTTTAAATATCGCCGTGGATaGCACCTGCCAGTAAACAATATACGCAGGCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: PKFQVFFKYRRG*HLPVNNIRRLL Trigger: TAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCATCCACGGCGATATTTAAAGAACACCTGGAACTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CCA 72 bp | CCTGACCTCCATCCATTTCTCTTAACAATCCTGCTGTaGCTGAAGGTCTGCACCCAAAAGATACGACTCTTG | + |
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Preference number: 3 (lower is better) Translates to: PDLHPFLLTILL*LKVCTQKIRLL Trigger: CAAGAGTCGTATCTTTTGGGTGCAGACCTTCAGCCACAGCAGGATTGTTAAGAGAAATGGATGGAGGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CCA 72 bp | ACAAACCACACAGGGAGCTTTTCTACACTGCTCGTCTaGACACTGGCATTGACCTTAAGGGCAAAGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: TNHTGSFSTLLV*TLALTLRAKKR Trigger: TCTTTTCTTTGCCCTTAAGGTCAATGCCAGTGTCCAGACGAGCAGTGTAGAAAAGCTCCCTGTGTGGTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CCA 72 bp | TTACCAGTCAGCAATGTCCGTGTTCATACAGTGAGCTaGTCACTCTCCCAGCTTTGCTATTCAAGAAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: LPVSNVRVHTVS*SLSQLCYSRKV Trigger: CACTTTTCTTGAATAGCAAAGCTGGGAGAGTGACCAGCTCACTGTATGAACACGGACATTGCTGACTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR CAA 90 bp | GTGTTCTTGGCAGATTCACTCGAACGTAAGGAGAATAAAGAGCTAATGAAACTATGCCCAAGAATGGGATaGGGGGAAACTGGCCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: VFLADSLERKENKELMKLCPRMG*GETGQE Trigger: TTCTTGGCCAGTTTCCCCCAATCCCATTCTTGGGCA...TAGTTTCATTAGCTCTTTATTCTCCTTACGTTCGAGTGAATCTGCCAAGAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR GCA 72 bp | CGTGTTCATACAGTGAGCTGGTCACTCTCCCAGCTTTaGTATTCAAGAAAAGTGATGTCTATGGAGTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: RVHTVSWSLSQL*YSRKVMSMELR Trigger: TCTCAACTCCATAGACATCACTTTTCTTGAATAGCAAAGCTGGGAGAGTGACCAGCTCACTGTATGAACACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR CAA 90 bp | GTGTTCTTGGCAGATTCACTCGAACGTAAGGAGAATAAAGAGCTAATGAAACTAGAAGCAGCAGTTCAGTaGGCAACTGTTTGGCAATGT | + |
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Preference number: 3 (lower is better) Translates to: VFLADSLERKENKELMKLEAAVQ*ATVWQC Trigger: ACATTGCCAAACAGTTGCCAACTGAACTGCTGCTTC...TAGTTTCATTAGCTCTTTATTCTCCTTACGTTCGAGTGAATCTGCCAAGAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR-3UTR CAA 90 bp | GTGTTCTTGGCAGATTCACTCGAACGTAAGGAGAATAAAGAGCTAATGAAACTATTTAATGCTGACATTTaGAGACACTGGCTTTTACTG | + |
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Preference number: 3 (lower is better) Translates to: VFLADSLERKENKELMKLFNADI*RHWLLL Trigger: CAGTAAAAGCCAGTGTCTCAAAATGTCAGCATTAAA...TAGTTTCATTAGCTCTTTATTCTCCTTACGTTCGAGTGAATCTGCCAAGAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CAA 72 bp | AGGGCAAGGGTGGAAGGACGCGGCCGGTACGTGGCCTaGAGAAGCAAGGACTTCTTCCCAGCCTGTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: RARVEGRGRYVA*RSKDFFPACAL Trigger: GAGGGCACAGGCTGGGAAGAAGTCCTTGCTTCTCAAGGCCACGTACCGGCCGCGTCCTTCCACCCTTGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CAA 72 bp | ACGTCACTCGATGGGAGAAACTGCCCAAGAATGGGATaGGGGGAAACTGGCCAAGAATGGGATTGGGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: TSLDGRNCPRMG*GETGQEWDWGQ Trigger: TTGCCCCCAATCCCATTCTTGGCCAGTTTCCCCCAATCCCATTCTTGGGCAGTTTCTCCCATCGAGTGACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CAA 72 bp | CGGACCATGAGAAGCAGCAGTTCAGTTGGCAACTGTTaGGCAATGTGTGTTTCCGGTTCACACCCTGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: RTMRSSSSVGNC*AMCVSGSHPAV Trigger: GACAGCAGGGTGTGAACCGGAAACACACATTGCCAAACAGTTGCCAACTGAACTGCTGCTTCTCATGGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| CDS-3UTR CCA 90 bp | GCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTACTCAGGACGCCTGGGCATCTCTCTaGGGTCCATCATATTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ASKQYTQAPKKNFPATQDAWASL*GPSYSG Trigger: CCCAGAATATGATGGACCCCAGAGAGATGCCCAGGC...GTCCTGAGTAGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| CDS-3UTR TCA 90 bp | AACAATCCTGCTGTGGCTGAAGGTCTGCACCCAAAAGATACGACTCTTGATCATCGAACATTTTCAGGATaGATTCTCGAGCTGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NNPAVAEGLHPKDTTLDHRTFSG*ILELPG Trigger: CCCAGGCAGCTCGAGAATTCATCCTGAAAATGTTCG...ATGATCAAGAGTCGTATCTTTTGGGTGCAGACCTTCAGCCACAGCAGGATTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CAA 72 bp | CCGTGTTCATACAGTGAGCTGGTCACTCTCCCAGCTTaGCTATTCAAGAAAAGTGATGTCTATGGAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PCSYSELVTLPA*LFKKSDVYGVE Trigger: CTCAACTCCATAGACATCACTTTTCTTGAATAGCAAAGCTGGGAGAGTGACCAGCTCACTGTATGAACACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| CDS-3UTR GCA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTCTCTCGAACCAATTGTaGATGAGCCTTATTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: MPPASKQYTQAPKKNFPALSNQL*MSLIVF Trigger: GAACACAATAAGGCTCATGCACAATTGGTTCGAGAG...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| CDS-3UTR GCA 90 bp | GCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTACTCAGGACAATTGTTCTAAAGAGTaGTTTGCTCTCCTCCATGCG | + |
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Preference number: 4 (lower is better) Translates to: ASKQYTQAPKKNFPATQDNCSKE*FALLHA Trigger: CGCATGGAGGAGAGCAAAGCACTCTTTAGAACAATT...GTCCTGAGTAGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| 3UTR CAA 72 bp | CAGCTTTGCTATTCAAGAAAAGTGATGTCTATGGAGTaGAGATTAGTGCCAAGCGCTAATGAGACCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: QLCYSRKVMSME*RLVPSANETSI Trigger: GATGCTGGTCTCATTAGCGCTTGGCACTAATCTCAACTCCATAGACATCACTTTTCTTGAATAGCAAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| CDS-3UTR TCA 90 bp | GTGTTCTTGGCAGATTCACTCGAACGTAAGGAGAATAAAGAGCTAATGAAACTACGAACCAATTGTGCATaGGCCTTATTGTGTTCATAC | + |
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Preference number: 4 (lower is better) Translates to: VFLADSLERKENKELMKLRTNCA*ALLCSY Trigger: GTATGAACACAATAAGGCTCATGCACAATTGGTTCG...TAGTTTCATTAGCTCTTTATTCTCCTTACGTTCGAGTGAATCTGCCAAGAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| CDS-3UTR CAA 90 bp | TGGGAGAAACTGCCCAAGAATGGGATTGGGGGAAACTGGCCAAGAATGGGATTGTCTAAGCACGTCTTGTaGTGTAGGCAGATAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: WEKLPKNGIGGNWPRMGLSKHVL*CRQIGR Trigger: CCTTCCTATCTGCCTACACAACAAGACGTGCTTAGA...CAATCCCATTCTTGGCCAGTTTCCCCCAATCCCATTCTTGGGCAGTTTCTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| CDS-3UTR CAA 90 bp | GCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTACTCAGGACTCCATGCGGTTCTCATaGTCTGACTCCACAAGAACT | + |
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Preference number: 5 (lower is better) Translates to: ASKQYTQAPKKNFPATQDSMRFS*SDSTRT Trigger: AGTTCTTGTGGAGTCAGACAATGAGAACCGCATGGA...GTCCTGAGTAGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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| CDS-3UTR CAA 90 bp | ATGCCACCTGCCAGTAAACAATATACGCAGGCTCCTAAGAAGAATTTCCCAGCTAACCTCTCGAACCAATaGTGCATGAGCCTTATTGTG | + |
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Preference number: 5 (lower is better) Translates to: MPPASKQYTQAPKKNFPANLSNQ*CMSLIV Trigger: CACAATAAGGCTCATGCACAATTGGTTCGAGAGGTT...AGCTGGGAAATTCTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025541.6 |
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