Pregenerated sensors for GNAI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057614Ensembl transcript IDs: ENSMUST00000074694.7
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AACTATGCACCAGCAAAGCTCGTGGACAGAGTTAATGTTGCAGGATaGGTTCAAAAGGAGAAGGAGCTGGGAAGGCGAGTCAGCTTGCTG | + |
Preference number: 1 (lower is better) Translates to: NYAPAKLVDRVNVAG*VQKEKELGRRVSLL Trigger: CAGCAAGCTGACTCGCCTTCCCAGCTCCTTCTCCTTTTGAACTCATCCTGCAACATTAACTCTGTCCACGAGCTTTGCTGGTGCATAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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3UTR CAA 90 bp | CTCTGGTCAGGTCCAGGATGCATTTGCTGTACACTACATTCTGAGTaGCTGGGACACTCTAGTCTAGAGAGATCCATATATAAGTACTCA | + |
Preference number: 2 (lower is better) Translates to: LWSGPGCICCTLHSE*LGHSSLERSIYKYS Trigger: TGAGTACTTATATATGGATCTCTCTAGACTAGAGTGTCCCAGCAACTCAGAATGTAGTGTACAGCAAATGCATCCTGGACCTGACCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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3UTR-3UTR GCA 90 bp | CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGGTCCAGGATGCATTTaGTGTACACTACATTCTGAG | + |
Preference number: 2 (lower is better) Translates to: LLRSDKDTIQNNFGQNSGGPGCI*CTLHSE Trigger: CTCAGAATGTAGTGTACAGCAAATGCATCCTGGACC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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3UTR TCA 72 bp | CCAGCAAAGCTCGTGGACAGAGTTAATGTTGCAGGATaGGTTCAAAAGGAGAAGGAGCTGGGAAGGCGAGTC | + |
Preference number: 3 (lower is better) Translates to: PAKLVDRVNVAG*VQKEKELGRRV Trigger: GACTCGCCTTCCCAGCTCCTTCTCCTTTTGAACTCATCCTGCAACATTAACTCTGTCCACGAGCTTTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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3UTR CCA 72 bp | ATATACACAAACTTCAACAGGGAGACTCTGGGGAACTaGCAACACCTAACTCAAGTGAGCAACTATGCACCA | + |
Preference number: 3 (lower is better) Translates to: IYTNFNRETLGN*QHLTQVSNYAP Trigger: TGGTGCATAGTTGCTCACTTGAGTTAGGTGTTGCCAGTTCCCCAGAGTCTCCCTGTTGAAGTTTGTGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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3UTR TCA 72 bp | CAGCTTGCTGAAACCAGGGCGCACACACATTGTAAATaGTTTTGTTTCAATGGCACGAACAAAGTTCAGTAT | + |
Preference number: 3 (lower is better) Translates to: QLAETRAHTHCK*FCFNGTNKVQY Trigger: ATACTGAACTTTGTTCGTGCCATTGAAACAAAATCATTTACAATGTGTGTGCGCCCTGGTTTCAGCAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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3UTR-3UTR CAA 90 bp | CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGACACTACATTCTGAGTaGCTGGGACACTCTAGTCTA | + |
Preference number: 3 (lower is better) Translates to: QVLLLRSDKDTIQNNFGQTLHSE*LGHSSL Trigger: TAGACTAGAGTGTCCCAGCAACTCAGAATGTAGTGT...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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3UTR CCA 72 bp | GAATCAAAGTTGCCACTCTTACAACCTAAACATATGTaGGAAATCAAAAGTTATGAGTACATCTTACATCTG | + |
Preference number: 3 (lower is better) Translates to: ESKLPLLQPKHM*EIKSYEYILHL Trigger: CAGATGTAAGATGTACTCATAACTTTTGATTTCCCACATATGTTTAGGTTGTAAGAGTGGCAACTTTGATTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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3UTR CAA 72 bp | GTTCAAAAGGAGAAGGAGCTGGGAAGGCGAGTCAGCTaGCTGAAACCAGGGCGCACACACATTGTAAATGAT | + |
Preference number: 4 (lower is better) Translates to: VQKEKELGRRVS*LKPGRTHIVND Trigger: ATCATTTACAATGTGTGTGCGCCCTGGTTTCAGCAAGCTGACTCGCCTTCCCAGCTCCTTCTCCTTTTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR TCA 90 bp | CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGGGGCCACACAGAAGATaGTGGCGGTCACCCCTTCAA | + |
Preference number: 4 (lower is better) Translates to: QVLLLRSDKDTIQNNFGQGPHRR*WRSPLQ Trigger: TTGAAGGGGTGACCGCCATCATCTTCTGTGTGGCCC...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR TCA 90 bp | CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTACTCCCGGGATCTGTTaGAGCAGGCTTGCACACCAC | + |
Preference number: 4 (lower is better) Translates to: LLRSDKDTIQNNFGQNSGTPGIC*SRLAHH Trigger: GTGGTGTGCAAGCCTGCTTCAACAGATCCCGGGAGT...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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3UTR CAA 72 bp | GGTCCAGGATGCATTTGCTGTACACTACATTCTGAGTaGCTGGGACACTCTAGTCTAGAGAGATCCATATAT | + |
Preference number: 4 (lower is better) Translates to: GPGCICCTLHSE*LGHSSLERSIY Trigger: ATATATGGATCTCTCTAGACTAGAGTGTCCCAGCAACTCAGAATGTAGTGTACAGCAAATGCATCCTGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR CCA 90 bp | CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGCCGAATCGTTCAGCTaGTACTCCCGGGATCTGTTG | + |
Preference number: 4 (lower is better) Translates to: LLRSDKDTIQNNFGQNSGAESFS*YSRDLL Trigger: CAACAGATCCCGGGAGTACCAGCTGAACGATTCGGC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR TCA 90 bp | CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTTTCCGCTCTGACCTCTaGCCTCCCACGTCAAACATT | + |
Preference number: 4 (lower is better) Translates to: LLRSDKDTIQNNFGQNSGFRSDL*PPTSNI Trigger: AATGTTTGACGTGGGAGGTCAGAGGTCAGAGCGGAA...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR GCA 90 bp | CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGACCACTGCCTTGTACTaGTTACACTCCTCTTCCGAG | + |
Preference number: 4 (lower is better) Translates to: QVLLLRSDKDTIQNNFGQTTALY*LHSSSE Trigger: CTCGGAAGAGGAGTGTAAGCAGTACAAGGCAGTGGT...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR GCA 90 bp | CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGACACCGGCGAGCTCTaGAGTCATAAAGCCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: LLRSDKDTIQNNFGQNSGDTGEL*SHKAFF Trigger: GAAGAAGGCTTTATGACTGCAGAGCTCGCCGGTGTC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR GCA 90 bp | CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGCTGTTGAAGCAGGCTTaGACACCACTGTCTTTCCAC | + |
Preference number: 4 (lower is better) Translates to: QVLLLRSDKDTIQNNFGQLLKQA*TPLSFH Trigger: GTGGAAAGACAGTGGTGTGCAAGCCTGCTTCAACAG...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR CCA 90 bp | CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGACATCCTGCTGAGTTaGGATGTAATTTGGCTGTGC | + |
Preference number: 4 (lower is better) Translates to: LLRSDKDTIQNNFGQNSGDILLS*DVIWLC Trigger: GCACAGCCAAATTACATCCCAACTCAGCAGGATGTC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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3UTR CAA 72 bp | TATTACGTTCAGATAAAGATACAATACAGAACAACTTaGGTCAGAACTCTGGTCAGGTCCAGGATGCATTTG | + |
Preference number: 4 (lower is better) Translates to: YYVQIKIQYRTT*VRTLVRSRMHL Trigger: CAAATGCATCCTGGACCTGACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR TCA 90 bp | CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGTGTCCTTCCTTTTATTaGGGTCTTCAAACTGACACT | + |
Preference number: 4 (lower is better) Translates to: QVLLLRSDKDTIQNNFGQCPSFY*GLQTDT Trigger: AGTGTCAGTTTGAAGACCTCAATAAAAGGAAGGACA...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR CCA 90 bp | CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAGTTGGGATGTAATTTaGCTGTGCTATTCTGTCCAA | + |
Preference number: 4 (lower is better) Translates to: QVLLLRSDKDTIQNNFGQSWDVI*LCYSVQ Trigger: TTGGACAGAATAGCACAGCCAAATTACATCCCAACT...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR CCA 90 bp | CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTTCTTTGAAGGTAAAGTaGGTTTCCACAATCCCTGTG | + |
Preference number: 4 (lower is better) Translates to: LLRSDKDTIQNNFGQNSGSLKVK*VSTIPV Trigger: CACAGGGATTGTGGAAACCCACTTTACCTTCAAAGA...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR GCA 90 bp | CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGGATGTAATTTGGCTGTaGTATTCTGTCCAAGTCATT | + |
Preference number: 4 (lower is better) Translates to: QVLLLRSDKDTIQNNFGQDVIWL*YSVQVI Trigger: AATGACTTGGACAGAATAGCACAGCCAAATTACATC...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR GCA 90 bp | CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTACTTGTTGTTACAGATaGTATCGAACAGCTTCATGC | + |
Preference number: 4 (lower is better) Translates to: LLRSDKDTIQNNFGQNSGTCCYR*YRTASC Trigger: GCATGAAGCTGTTCGATAGCATCTGTAACAACAAGT...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS GCA 90 bp | TCTCTTTATGACACCGGCGAGCTCTGCAGTCATAAAGCCTTCTTCTaGAGCCCCAGCAAGCACGAAAAGTTGGCGAGCATCATCCGCCCG | + |
Preference number: 5 (lower is better) Translates to: SLYDTGELCSHKAFF*SPSKHEKLASIIRP Trigger: CGGGCGGATGATGCTCGCCAACTTTTCGTGCTTGCTGGGGCTGCAGAAGAAGGCTTTATGACTGCAGAGCTCGCCGGTGTCATAAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS GCA 90 bp | CACACCACTGTCTTTCCACAGTCTCTTTATGACACCGGCGAGCTCTaGAGTCATAAAGCCTTCTTCTGCAGCCCCAGCAAGCACGAAAAG | + |
Preference number: 5 (lower is better) Translates to: HTTVFPQSLYDTGEL*SHKAFFCSPSKHEK Trigger: CTTTTCGTGCTTGCTGGGGCTGCAGAAGAAGGCTTTATGACTGCAGAGCTCGCCGGTGTCATAAAGAGACTGTGGAAAGACAGTGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR CAA 90 bp | CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGGACATCCTGCTGAGTaGGGATGTAATTTGGCTGTG | + |
Preference number: 5 (lower is better) Translates to: LLRSDKDTIQNNFGQNSGGHPAE*GCNLAV Trigger: CACAGCCAAATTACATCCCAACTCAGCAGGATGTCC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR CAA 90 bp | CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGTCGAAGAGGTCCTTCTaGTTGAGGAAAAGGATGATG | + |
Preference number: 5 (lower is better) Translates to: QVLLLRSDKDTIQNNFGQSKRSF*LRKRMM Trigger: CATCATCCTTTTCCTCAACAAGAAGGACCTCTTCGA...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS-3UTR CAA 90 bp | CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGAGTTGGGATGTAATTaGGCTGTGCTATTCTGTCCA | + |
Preference number: 5 (lower is better) Translates to: LLRSDKDTIQNNFGQNSGELGCN*AVLFCP Trigger: TGGACAGAATAGCACAGCCAAATTACATCCCAACTC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS CCA 72 bp | AAGCCTTCTTCTGCAGCCCCAGCAAGCACGAAAAGTTaGCGAGCATCATCCGCCCGAGCAGAGTCTCCGAAG | + |
Preference number: 6 (lower is better) Translates to: KPSSAAPASTKS*RASSARAESPK Trigger: CTTCGGAGACTCTGCTCGGGCGGATGATGCTCGCCAACTTTTCGTGCTTGCTGGGGCTGCAGAAGAAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS CAA 72 bp | AAAGCCTTCTTCTGCAGCCCCAGCAAGCACGAAAAGTaGGCGAGCATCATCCGCCCGAGCAGAGTCTCCGAA | + |
Preference number: 6 (lower is better) Translates to: KAFFCSPSKHEK*ASIIRPSRVSE Trigger: TTCGGAGACTCTGCTCGGGCGGATGATGCTCGCCAACTTTTCGTGCTTGCTGGGGCTGCAGAAGAAGGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS CAA 90 bp | TGCAGTCATAAAGCCTTCTTCTGCAGCCCCAGCAAGCACGAAAAGTaGGCGAGCATCATCCGCCCGAGCAGAGTCTCCGAAGTCGATTTT | + |
Preference number: 6 (lower is better) Translates to: CSHKAFFCSPSKHEK*ASIIRPSRVSEVDF Trigger: AAAATCGACTTCGGAGACTCTGCTCGGGCGGATGATGCTCGCCAACTTTTCGTGCTTGCTGGGGCTGCAGAAGAAGGCTTTATGACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |
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CDS GCA 72 bp | GTCTTTCCACAGTCTCTTTATGACACCGGCGAGCTCTaGAGTCATAAAGCCTTCTTCTGCAGCCCCAGCAAG | + |
Preference number: 6 (lower is better) Translates to: VFPQSLYDTGEL*SHKAFFCSPSK Trigger: CTTGCTGGGGCTGCAGAAGAAGGCTTTATGACTGCAGAGCTCGCCGGTGTCATAAAGAGACTGTGGAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074694.7 |