RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNAI1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057614

Ensembl transcript IDs: ENSMUST00000074694.7

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACTATGCACCAGCAAAGCTCGTGGACAGAGTTAATGTTGCAGGATaGGTTCAAAAGGAGAAGGAGCTGGGAAGGCGAGTCAGCTTGCTG +
Preference number: 1 (lower is better)
Translates to: NYAPAKLVDRVNVAG*VQKEKELGRRVSLL
Trigger: CAGCAAGCTGACTCGCCTTCCCAGCTCCTTCTCCTTTTGAACTCATCCTGCAACATTAACTCTGTCCACGAGCTTTGCTGGTGCATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
3UTR CAA 90 bp CTCTGGTCAGGTCCAGGATGCATTTGCTGTACACTACATTCTGAGTaGCTGGGACACTCTAGTCTAGAGAGATCCATATATAAGTACTCA +
Preference number: 2 (lower is better)
Translates to: LWSGPGCICCTLHSE*LGHSSLERSIYKYS
Trigger: TGAGTACTTATATATGGATCTCTCTAGACTAGAGTGTCCCAGCAACTCAGAATGTAGTGTACAGCAAATGCATCCTGGACCTGACCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
3UTR-3UTR GCA 90 bp CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGGTCCAGGATGCATTTaGTGTACACTACATTCTGAG +
Preference number: 2 (lower is better)
Translates to: LLRSDKDTIQNNFGQNSGGPGCI*CTLHSE
Trigger: CTCAGAATGTAGTGTACAGCAAATGCATCCTGGACC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
3UTR TCA 72 bp CCAGCAAAGCTCGTGGACAGAGTTAATGTTGCAGGATaGGTTCAAAAGGAGAAGGAGCTGGGAAGGCGAGTC +
Preference number: 3 (lower is better)
Translates to: PAKLVDRVNVAG*VQKEKELGRRV
Trigger: GACTCGCCTTCCCAGCTCCTTCTCCTTTTGAACTCATCCTGCAACATTAACTCTGTCCACGAGCTTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
3UTR CCA 72 bp ATATACACAAACTTCAACAGGGAGACTCTGGGGAACTaGCAACACCTAACTCAAGTGAGCAACTATGCACCA +
Preference number: 3 (lower is better)
Translates to: IYTNFNRETLGN*QHLTQVSNYAP
Trigger: TGGTGCATAGTTGCTCACTTGAGTTAGGTGTTGCCAGTTCCCCAGAGTCTCCCTGTTGAAGTTTGTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
3UTR TCA 72 bp CAGCTTGCTGAAACCAGGGCGCACACACATTGTAAATaGTTTTGTTTCAATGGCACGAACAAAGTTCAGTAT +
Preference number: 3 (lower is better)
Translates to: QLAETRAHTHCK*FCFNGTNKVQY
Trigger: ATACTGAACTTTGTTCGTGCCATTGAAACAAAATCATTTACAATGTGTGTGCGCCCTGGTTTCAGCAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
3UTR-3UTR CAA 90 bp CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGACACTACATTCTGAGTaGCTGGGACACTCTAGTCTA +
Preference number: 3 (lower is better)
Translates to: QVLLLRSDKDTIQNNFGQTLHSE*LGHSSL
Trigger: TAGACTAGAGTGTCCCAGCAACTCAGAATGTAGTGT...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
3UTR CCA 72 bp GAATCAAAGTTGCCACTCTTACAACCTAAACATATGTaGGAAATCAAAAGTTATGAGTACATCTTACATCTG +
Preference number: 3 (lower is better)
Translates to: ESKLPLLQPKHM*EIKSYEYILHL
Trigger: CAGATGTAAGATGTACTCATAACTTTTGATTTCCCACATATGTTTAGGTTGTAAGAGTGGCAACTTTGATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
3UTR CAA 72 bp GTTCAAAAGGAGAAGGAGCTGGGAAGGCGAGTCAGCTaGCTGAAACCAGGGCGCACACACATTGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: VQKEKELGRRVS*LKPGRTHIVND
Trigger: ATCATTTACAATGTGTGTGCGCCCTGGTTTCAGCAAGCTGACTCGCCTTCCCAGCTCCTTCTCCTTTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR TCA 90 bp CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGGGGCCACACAGAAGATaGTGGCGGTCACCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: QVLLLRSDKDTIQNNFGQGPHRR*WRSPLQ
Trigger: TTGAAGGGGTGACCGCCATCATCTTCTGTGTGGCCC...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR TCA 90 bp CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTACTCCCGGGATCTGTTaGAGCAGGCTTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: LLRSDKDTIQNNFGQNSGTPGIC*SRLAHH
Trigger: GTGGTGTGCAAGCCTGCTTCAACAGATCCCGGGAGT...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
3UTR CAA 72 bp GGTCCAGGATGCATTTGCTGTACACTACATTCTGAGTaGCTGGGACACTCTAGTCTAGAGAGATCCATATAT +
Preference number: 4 (lower is better)
Translates to: GPGCICCTLHSE*LGHSSLERSIY
Trigger: ATATATGGATCTCTCTAGACTAGAGTGTCCCAGCAACTCAGAATGTAGTGTACAGCAAATGCATCCTGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR CCA 90 bp CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGCCGAATCGTTCAGCTaGTACTCCCGGGATCTGTTG +
Preference number: 4 (lower is better)
Translates to: LLRSDKDTIQNNFGQNSGAESFS*YSRDLL
Trigger: CAACAGATCCCGGGAGTACCAGCTGAACGATTCGGC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR TCA 90 bp CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTTTCCGCTCTGACCTCTaGCCTCCCACGTCAAACATT +
Preference number: 4 (lower is better)
Translates to: LLRSDKDTIQNNFGQNSGFRSDL*PPTSNI
Trigger: AATGTTTGACGTGGGAGGTCAGAGGTCAGAGCGGAA...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR GCA 90 bp CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGACCACTGCCTTGTACTaGTTACACTCCTCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: QVLLLRSDKDTIQNNFGQTTALY*LHSSSE
Trigger: CTCGGAAGAGGAGTGTAAGCAGTACAAGGCAGTGGT...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR GCA 90 bp CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGACACCGGCGAGCTCTaGAGTCATAAAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLRSDKDTIQNNFGQNSGDTGEL*SHKAFF
Trigger: GAAGAAGGCTTTATGACTGCAGAGCTCGCCGGTGTC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR GCA 90 bp CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGCTGTTGAAGCAGGCTTaGACACCACTGTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: QVLLLRSDKDTIQNNFGQLLKQA*TPLSFH
Trigger: GTGGAAAGACAGTGGTGTGCAAGCCTGCTTCAACAG...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR CCA 90 bp CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGACATCCTGCTGAGTTaGGATGTAATTTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LLRSDKDTIQNNFGQNSGDILLS*DVIWLC
Trigger: GCACAGCCAAATTACATCCCAACTCAGCAGGATGTC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
3UTR CAA 72 bp TATTACGTTCAGATAAAGATACAATACAGAACAACTTaGGTCAGAACTCTGGTCAGGTCCAGGATGCATTTG +
Preference number: 4 (lower is better)
Translates to: YYVQIKIQYRTT*VRTLVRSRMHL
Trigger: CAAATGCATCCTGGACCTGACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR TCA 90 bp CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGTGTCCTTCCTTTTATTaGGGTCTTCAAACTGACACT +
Preference number: 4 (lower is better)
Translates to: QVLLLRSDKDTIQNNFGQCPSFY*GLQTDT
Trigger: AGTGTCAGTTTGAAGACCTCAATAAAAGGAAGGACA...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR CCA 90 bp CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAGTTGGGATGTAATTTaGCTGTGCTATTCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: QVLLLRSDKDTIQNNFGQSWDVI*LCYSVQ
Trigger: TTGGACAGAATAGCACAGCCAAATTACATCCCAACT...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR CCA 90 bp CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTTCTTTGAAGGTAAAGTaGGTTTCCACAATCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLRSDKDTIQNNFGQNSGSLKVK*VSTIPV
Trigger: CACAGGGATTGTGGAAACCCACTTTACCTTCAAAGA...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR GCA 90 bp CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGGATGTAATTTGGCTGTaGTATTCTGTCCAAGTCATT +
Preference number: 4 (lower is better)
Translates to: QVLLLRSDKDTIQNNFGQDVIWL*YSVQVI
Trigger: AATGACTTGGACAGAATAGCACAGCCAAATTACATC...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR GCA 90 bp CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTACTTGTTGTTACAGATaGTATCGAACAGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: LLRSDKDTIQNNFGQNSGTCCYR*YRTASC
Trigger: GCATGAAGCTGTTCGATAGCATCTGTAACAACAAGT...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS GCA 90 bp TCTCTTTATGACACCGGCGAGCTCTGCAGTCATAAAGCCTTCTTCTaGAGCCCCAGCAAGCACGAAAAGTTGGCGAGCATCATCCGCCCG +
Preference number: 5 (lower is better)
Translates to: SLYDTGELCSHKAFF*SPSKHEKLASIIRP
Trigger: CGGGCGGATGATGCTCGCCAACTTTTCGTGCTTGCTGGGGCTGCAGAAGAAGGCTTTATGACTGCAGAGCTCGCCGGTGTCATAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS GCA 90 bp CACACCACTGTCTTTCCACAGTCTCTTTATGACACCGGCGAGCTCTaGAGTCATAAAGCCTTCTTCTGCAGCCCCAGCAAGCACGAAAAG +
Preference number: 5 (lower is better)
Translates to: HTTVFPQSLYDTGEL*SHKAFFCSPSKHEK
Trigger: CTTTTCGTGCTTGCTGGGGCTGCAGAAGAAGGCTTTATGACTGCAGAGCTCGCCGGTGTCATAAAGAGACTGTGGAAAGACAGTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR CAA 90 bp CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGGACATCCTGCTGAGTaGGGATGTAATTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LLRSDKDTIQNNFGQNSGGHPAE*GCNLAV
Trigger: CACAGCCAAATTACATCCCAACTCAGCAGGATGTCC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR CAA 90 bp CAGGTCCTTCTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGTCGAAGAGGTCCTTCTaGTTGAGGAAAAGGATGATG +
Preference number: 5 (lower is better)
Translates to: QVLLLRSDKDTIQNNFGQSKRSF*LRKRMM
Trigger: CATCATCCTTTTCCTCAACAAGAAGGACCTCTTCGA...CTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAGAAGGACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS-3UTR CAA 90 bp CTATTACGTTCAGATAAAGATACAATACAGAACAACTTTGGTCAGAACTCTGGTGAGTTGGGATGTAATTaGGCTGTGCTATTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: LLRSDKDTIQNNFGQNSGELGCN*AVLFCP
Trigger: TGGACAGAATAGCACAGCCAAATTACATCCCAACTC...ACCAGAGTTCTGACCAAAGTTGTTCTGTATTGTATCTTTATCTGAACGTAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS CCA 72 bp AAGCCTTCTTCTGCAGCCCCAGCAAGCACGAAAAGTTaGCGAGCATCATCCGCCCGAGCAGAGTCTCCGAAG +
Preference number: 6 (lower is better)
Translates to: KPSSAAPASTKS*RASSARAESPK
Trigger: CTTCGGAGACTCTGCTCGGGCGGATGATGCTCGCCAACTTTTCGTGCTTGCTGGGGCTGCAGAAGAAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS CAA 72 bp AAAGCCTTCTTCTGCAGCCCCAGCAAGCACGAAAAGTaGGCGAGCATCATCCGCCCGAGCAGAGTCTCCGAA +
Preference number: 6 (lower is better)
Translates to: KAFFCSPSKHEK*ASIIRPSRVSE
Trigger: TTCGGAGACTCTGCTCGGGCGGATGATGCTCGCCAACTTTTCGTGCTTGCTGGGGCTGCAGAAGAAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS CAA 90 bp TGCAGTCATAAAGCCTTCTTCTGCAGCCCCAGCAAGCACGAAAAGTaGGCGAGCATCATCCGCCCGAGCAGAGTCTCCGAAGTCGATTTT +
Preference number: 6 (lower is better)
Translates to: CSHKAFFCSPSKHEK*ASIIRPSRVSEVDF
Trigger: AAAATCGACTTCGGAGACTCTGCTCGGGCGGATGATGCTCGCCAACTTTTCGTGCTTGCTGGGGCTGCAGAAGAAGGCTTTATGACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7
CDS GCA 72 bp GTCTTTCCACAGTCTCTTTATGACACCGGCGAGCTCTaGAGTCATAAAGCCTTCTTCTGCAGCCCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: VFPQSLYDTGEL*SHKAFFCSPSK
Trigger: CTTGCTGGGGCTGCAGAAGAAGGCTTTATGACTGCAGAGCTCGCCGGTGTCATAAAGAGACTGTGGAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074694.7