Pregenerated sensors for GNA13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020611Ensembl transcript IDs: ENSMUST00000020930.14, ENSMUST00000106702.4
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACAAAGTCCAAGGAGACAGGACCAGAAAGTCACACTCTGGGGCTaGTATGGTGATGTCCGTCACCAGGGTGCTTGCCCTCTCCAGATG | + |
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Preference number: 1 (lower is better) Translates to: AQSPRRQDQKVTLWG*YGDVRHQGACPLQM Trigger: CATCTGGAGAGGGCAAGCACCCTGGTGACGGACATCACCATAGCAGCCCCAGAGTGTGACTTTCTGGTCCTGTCTCCTTGGACTTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CCA 90 bp | AGCAAGGCACAAAGTCCAAGGAGACAGGACCAGAAAGTCACACTCTaGGGCTGCTATGGTGATGTCCGTCACCAGGGTGCTTGCCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: SKAQSPRRQDQKVTL*GCYGDVRHQGACPL Trigger: GAGAGGGCAAGCACCCTGGTGACGGACATCACCATAGCAGCCCCAGAGTGTGACTTTCTGGTCCTGTCTCCTTGGACTTTGTGCCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR TCA 90 bp | TCCAAGGAGACAGGACCAGAAAGTCACACTCTGGGGCTGCTATGGTaGTGTCCGTCACCAGGGTGCTTGCCCTCTCCAGATGTTGTAACA | + |
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Preference number: 1 (lower is better) Translates to: SKETGPESHTLGLLW*CPSPGCLPSPDVVT Trigger: TGTTACAACATCTGGAGAGGGCAAGCACCCTGGTGACGGACATCACCATAGCAGCCCCAGAGTGTGACTTTCTGGTCCTGTCTCCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CCA 90 bp | GGTCAGAGAACAACTGGCAGGAGTTGGTTCTCTCCTCCCACAGCATaGGTTCCAGTCATCTCGCTGGCCCTCAAATACGACTTGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: GQRTTGRSWFSPPTA*VPVISLALKYDLKG Trigger: TCCCTTCAAGTCGTATTTGAGGGCCAGCGAGATGACTGGAACCCATGCTGTGGGAGGAGAGAACCAACTCCTGCCAGTTGTTCTCTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
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| 3UTR CCA 90 bp | ACACTTGCACAAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTaGCAGGAGTTGGTTCTCTCCTCCCACAGCATGGGTTCCAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: TLAQAVAHVWRSENN*QELVLSSHSMGSSH Trigger: ATGACTGGAACCCATGCTGTGGGAGGAGAGAACCAACTCCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTTGTGCAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
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| 3UTR GCA 90 bp | TCAACCAAGACACTTGTGTGGTTCTCTGTCAGTAAGCAGGAAGGCTaGGGGATTGAAGGAGGAGTCTGGATTAGGCACAGTCACTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: STKTLVWFSVSKQEG*GIEGGVWIRHSHSK Trigger: CTTGGAGTGACTGTGCCTAATCCAGACTCCTCCTTCAATCCCGCAGCCTTCCTGCTTACTGACAGAGAACCACACAAGTGTCTTGGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR GCA 90 bp | CTCTGTCACAGAGAGACACTAACCAGGGACAGGGTACTGAAAGGATaGCTTTTTGAACAGTTCACAGGGAAATGCTGCCCACCAAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LCHRETLTRDRVLKG*LFEQFTGKCCPPSS Trigger: AGAGCTTGGTGGGCAGCATTTCCCTGTGAACTGTTCAAAAAGGCATCCTTTCAGTACCCTGTCCCTGGTTAGTGTCTCTCTGTGACAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CCA 90 bp | CAACGTTGCATCTGTGAATGGAGCAAGGATTGCATACCGAGAAGGTaGTTTGTGGCCATCAGTGACCCTCACAGACCCAAAACTTCTACC | + |
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Preference number: 1 (lower is better) Translates to: QRCICEWSKDCIPRR*FVAISDPHRPKTST Trigger: GGTAGAAGTTTTGGGTCTGTGAGGGTCACTGATGGCCACAAACCACCTTCTCGGTATGCAATCCTTGCTCCATTCACAGATGCAACGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR TCA 90 bp | AAACAAACTACTGCTGTGTGTGTAGGGGGCCAAGCCTCTGTGGGCTaGGACTGCTGCCCTACAGAAATTAGAGAAATTGAGGGAAAACAA | + |
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Preference number: 1 (lower is better) Translates to: KQTTAVCVGGQASVG*DCCPTEIREIEGKQ Trigger: TTGTTTTCCCTCAATTTCTCTAATTTCTGTAGGGCAGCAGTCTCAGCCCACAGAGGCTTGGCCCCCTACACACACAGCAGTAGTTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR GCA 90 bp | GAATTTCTGTGCTCACCACAGAGCTTAAATGTAACCAGACACAACTaGTTTCTGGTGGGACTGACTTCTGCTGCCTTCACTGCACTTAGT | + |
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Preference number: 1 (lower is better) Translates to: EFLCSPQSLNVTRHN*FLVGLTSAAFTALS Trigger: ACTAAGTGCAGTGAAGGCAGCAGAAGTCAGTCCCACCAGAAAGCAGTTGTGTCTGGTTACATTTAAGCTCTGTGGTGAGCACAGAAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CCA 90 bp | CCAACACTGAGAAATGCATGCCATCAAAACAGATGCCCAAGCGTTTaGGCATACACACTAGAAGGTATGAGTTACTTGGGGGCATATGCT | + |
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Preference number: 1 (lower is better) Translates to: PTLRNACHQNRCPSV*AYTLEGMSYLGAYA Trigger: AGCATATGCCCCCAAGTAACTCATACCTTCTAGTGTGTATGCCCAAACGCTTGGGCATCTGTTTTGATGGCATGCATTTCTCAGTGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CCA 90 bp | TTTAAAATGACATTTATTCAGGTGAGTGCACACTTGCACAAGCTGTaGCACATGTGTGGAGGTCAGAGAACAACTGGCAGGAGTTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: FKMTFIQVSAHLHKL*HMCGGQRTTGRSWF Trigger: GAACCAACTCCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTTGTGCAAGTGTGCACTCACCTGAATAAATGTCATTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
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| 3UTR TCA 90 bp | GCAACATCTCAGGCCATTACAGACAGATATCTGGGTGGCACATCTTaGGTTGAGAGTATAAGAAAATGTGGAACAAAGCCCTTTCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: ATSQAITDRYLGGTS*VESIRKCGTKPFPH Trigger: ATGGGGAAAGGGCTTTGTTCCACATTTTCTTATACTCTCAACTCAAGATGTGCCACCCAGATATCTGTCTGTAATGGCCTGAGATGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR GCA 90 bp | ATTAAGTTAGTGACAGCATGTATGGCAAAGGAAACTGCGTGTCACTaGTCATCTCAGATCAACATAGCACATGTACCATTTGTGACCGCA | + |
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Preference number: 1 (lower is better) Translates to: IKLVTACMAKETACH*SSQINIAHVPFVTA Trigger: TGCGGTCACAAATGGTACATGTGCTATGTTGATCTGAGATGAGCAGTGACACGCAGTTTCCTTTGCCATACATGCTGTCACTAACTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CCA 90 bp | TCTGAAATGTATAAAAAGATTTCGAAGTCAACCAAGACACTTGTGTaGTTCTCTGTCAGTAAGCAGGAAGGCTGCGGGATTGAAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: SEMYKKISKSTKTLV*FSVSKQEGCGIEGG Trigger: TCCTCCTTCAATCCCGCAGCCTTCCTGCTTACTGACAGAGAACCACACAAGTGTCTTGGTTGACTTCGAAATCTTTTTATACATTTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR TCA 90 bp | ATCTCAGGCCATTACAGACAGATATCTGGGTGGCACATCTTGAGTTaGGAGTATAAGAAAATGTGGAACAAAGCCCTTTCCCCATTACAA | + |
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Preference number: 1 (lower is better) Translates to: ISGHYRQISGWHILS*EYKKMWNKALSPLQ Trigger: TTGTAATGGGGAAAGGGCTTTGTTCCACATTTTCTTATACTCTCAACTCAAGATGTGCCACCCAGATATCTGTCTGTAATGGCCTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR TCA 90 bp | TATTCTTCATATAAACGAGGCATAACCGGATGTGAATACCAACACTaGGAAATGCATGCCATCAAAACAGATGCCCAAGCGTTTGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: YSSYKRGITGCEYQH*EMHAIKTDAQAFGH Trigger: ATGCCCAAACGCTTGGGCATCTGTTTTGATGGCATGCATTTCTCAGTGTTGGTATTCACATCCGGTTATGCCTCGTTTATATGAAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CCA 90 bp | GGGATGCAGGGGTTCATACAGGAAATTCAAATTAACACTGACGCTTaGTCTTCTCAAACGAGAAAAATAACATCGCTAACAAATTGCACC | + |
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Preference number: 1 (lower is better) Translates to: GMQGFIQEIQINTDA*SSQTRKITSLTNCT Trigger: GGTGCAATTTGTTAGCGATGTTATTTTTCTCGTTTGAGAAGACCAAGCGTCAGTGTTAATTTGAATTTCCTGTATGAACCCCTGCATCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR TCA 90 bp | TGCTTATCCTTAGATGCATCCTTAAGACATTTGAATGTACCTCAATaGAGCTGTGTCTCACACACGATGACACACACAACACATACAAAC | + |
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Preference number: 1 (lower is better) Translates to: CLSLDASLRHLNVPQ*SCVSHTMTHTTHTN Trigger: GTTTGTATGTGTTGTGTGTGTCATCGTGTGTGAGACACAGCTTCATTGAGGTACATTCAAATGTCTTAAGGATGCATCTAAGGATAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CCA 90 bp | GCCTTTATGCATATTAATTTGTTTGGTGAAATGAAAGCATACCTTTaGACTCTTAGATCTACCTACAGGAATAATTTACGGCGACTCTTG | + |
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Preference number: 1 (lower is better) Translates to: AFMHINLFGEMKAYL*TLRSTYRNNLRRLL Trigger: CAAGAGTCGCCGTAAATTATTCCTGTAGGTAGATCTAAGAGTCCAAAGGTATGCTTTCATTTCACCAAACAAATTAATATGCATAAAGGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CAA 90 bp | GGACCCGGAAGGATGCTGTCTCTAGTCAGGAGCTCTGGTCCTTTCTaGGTGACGGTCACAATGGAGGAAGTCAGAGATCCTGCTCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: GPGRMLSLVRSSGPF*VTVTMEEVRDPALS Trigger: TGACAGAGCAGGATCTCTGACTTCCTCCATTGTGACCGTCACCAAGAAAGGACCAGAGCTCCTGACTAGAGACAGCATCCTTCCGGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CAA 90 bp | CCAGCTCTGGCACCCTCCAGCAAGAAAAGAAGAAAGCCACTGCTTTaGGGCCTCATAGTCAGCCAGTCTTTCAGGGCGCAATTTCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: PALAPSSKKRRKPLL*GLIVSQSFRAQFLA Trigger: GGCAAGAAATTGCGCCCTGAAAGACTGGCTGACTATGAGGCCCAAAAGCAGTGGCTTTCTTCTTTTCTTGCTGGAGGGTGCCAGAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CAA 90 bp | AGACACTTGTGTGGTTCTCTGTCAGTAAGCAGGAAGGCTGCGGGATaGAAGGAGGAGTCTGGATTAGGCACAGTCACTCCAAGCACCCGA | + |
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Preference number: 2 (lower is better) Translates to: RHLCGSLSVSRKAAG*KEESGLGTVTPSTR Trigger: TCGGGTGCTTGGAGTGACTGTGCCTAATCCAGACTCCTCCTTCAATCCCGCAGCCTTCCTGCTTACTGACAGAGAACCACACAAGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR CCA 90 bp | TACACTAGGGCCCAGCTCTGGCACCCTCCAGCAAGAAAAGAAGAAAGCCACTGCGAGGCATGTCATTGCTaGGTAAGGCACTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: YTRAQLWHPPARKEESHCEACHC*VRHSLS Trigger: AGAGAGAGAGTGCCTTACCCAGCAATGACATGCCTC...GCAGTGGCTTTCTTCTTTTCTTGCTGGAGGGTGCCAGAGCTGGGCCCTAGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR CCA 90 bp | ACCAACACTGAGAAATGCATGCCATCAAAACAGATGCCCAAGCGTTTGGGCATAGGGGCCAAGCCTCTGTaGGCTGAGACTGCTGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: TNTEKCMPSKQMPKRLGIGAKPL*AETAAL Trigger: TAGGGCAGCAGTCTCAGCCCACAGAGGCTTGGCCCC...TATGCCCAAACGCTTGGGCATCTGTTTTGATGGCATGCATTTCTCAGTGTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR TCA 90 bp | ATCCTGCTCTGTCAGGCAGAATTTCTGTGCTCACCACAGAGCTTAAATGTAACCCAAGCCTCTGTGGGCTaGGACTGCTGCCCTACAGAA | + |
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Preference number: 2 (lower is better) Translates to: ILLCQAEFLCSPQSLNVTQASVG*DCCPTE Trigger: TTCTGTAGGGCAGCAGTCTCAGCCCACAGAGGCTTG...GGTTACATTTAAGCTCTGTGGTGAGCACAGAAATTCTGCCTGACAGAGCAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR TCA 90 bp | TACACTAGGGCCCAGCTCTGGCACCCTCCAGCAAGAAAAGAAGAAAGCCACTGCGTGTCTCACACACGATaGCACACACAACACATACAA | + |
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Preference number: 2 (lower is better) Translates to: YTRAQLWHPPARKEESHCVSHTR*HTQHIQ Trigger: TTGTATGTGTTGTGTGTGTCATCGTGTGTGAGACAC...GCAGTGGCTTTCTTCTTTTCTTGCTGGAGGGTGCCAGAGCTGGGCCCTAGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR GCA 90 bp | ATTGAATACAGACAGGATTTGGCAGAGAGCAACATCTCAGGCCATTACAGACAGTTCACTGCCCTCGTGTaGTCTCCAGGGACAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: IEYRQDLAESNISGHYRQFTALV*SPGTAG Trigger: CCCTGCTGTCCCTGGAGAGCACACGAGGGCAGTGAA...CTGTCTGTAATGGCCTGAGATGTTGCTCTCTGCCAAATCCTGTCTGTATTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR TCA 90 bp | TGCATCCTTAAGACATTTGAATGTACCTCAATGAAGCTGTGTCTCACACACGATCTGGGGCTGCTATGGTaGTGTCCGTCACCAGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: CILKTFECTSMKLCLTHDLGLLW*CPSPGC Trigger: GCACCCTGGTGACGGACATCACCATAGCAGCCCCAG...ATCGTGTGTGAGACACAGCTTCATTGAGGTACATTCAAATGTCTTAAGGATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTAAAGGAAGAAGACCCAACAGTGGTTCTCTCCAGCAAGGCACAAAGTCCTATGGCAAAGGAAACTaGGTGTCACTGCTCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: GAKGRRPNSGSLQQGTKSYGKGN*VSLLIS Trigger: TGAGATGAGCAGTGACACGCAGTTTCCTTTGCCATA...GGACTTTGTGCCTTGCTGGAGAGAACCACTGTTGGGTCTTCTTCCTTTAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR CCA 90 bp | ACCAACACTGAGAAATGCATGCCATCAAAACAGATGCCCAAGCGTTTGGGCATAACATCCTGTCTGGCTTaGCTGAAGCTTCTCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: TNTEKCMPSKQMPKRLGITSCLA*LKLLFG Trigger: GCCAAAGAGAAGCTTCAGCCAAGCCAGACAGGATGT...TATGCCCAAACGCTTGGGCATCTGTTTTGATGGCATGCATTTCTCAGTGTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CAA 90 bp | AGGGAGAAGTCAGCACACGGAGGGTTAGGCACCTTTTCAATTCTGTaGGCTAAATTCCATCGCCCTCTTCACACAACAGTATTTCACTTC | + |
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Preference number: 2 (lower is better) Translates to: REKSAHGGLGTFSIL*AKFHRPLHTTVFHF Trigger: GAAGTGAAATACTGTTGTGTGAAGAGGGCGATGGAATTTAGCCAACAGAATTGAAAAGGTGCCTAACCCTCCGTGTGCTGACTTCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CAA 90 bp | ACCAACACTGAGAAATGCATGCCATCAAAACAGATGCCCAAGCGTTaGGGCATACACACTAGAAGGTATGAGTTACTTGGGGGCATATGC | + |
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Preference number: 2 (lower is better) Translates to: TNTEKCMPSKQMPKR*GIHTRRYELLGGIC Trigger: GCATATGCCCCCAAGTAACTCATACCTTCTAGTGTGTATGCCCAAACGCTTGGGCATCTGTTTTGATGGCATGCATTTCTCAGTGTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CAA 90 bp | CCCACAGCATGGGTTCCAGTCATCTCGCTGGCCCTCAAATACGACTaGAAGGGATTAGATGATGGTAGATCTTCAGAATTGCCTTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PTAWVPVISLALKYD*KGLDDGRSSELPFS Trigger: AGAAAAAGGCAATTCTGAAGATCTACCATCATCTAATCCCTTCAAGTCGTATTTGAGGGCCAGCGAGATGACTGGAACCCATGCTGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
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| 3UTR-3UTR CCA 90 bp | AATATGCAAGCCAACAGATACAAAACAATGCCATGTGCCACCCAAGGCACTCAATCTAGTCAGGAGCTCTaGTCCTTTCTTGGTGACGGT | + |
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Preference number: 2 (lower is better) Translates to: NMQANRYKTMPCATQGTQSSQEL*SFLGDG Trigger: ACCGTCACCAAGAAAGGACCAGAGCTCCTGACTAGA...TTGAGTGCCTTGGGTGGCACATGGCATTGTTTTGTATCTGTTGGCTTGCATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR GCA 90 bp | TTGGGCCTTGTGAGCTCACGTGTAAGAGAGAGAAGTCATTCAGGATATTTTGCGCAAAACAATGCCATGTaGCACCCAAGGCACTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LGLVSSRVRERSHSGYFAQNNAM*HPRHSK Trigger: TTTTGAGTGCCTTGGGTGGCACATGGCATTGTTTTG...CGCAAAATATCCTGAATGACTTCTCTCTCTTACACGTGAGCTCACAAGGCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR TCA 90 bp | ACTTCTGGTACTAATGGTGGTCTTACTCTTACTTTAGTAACAGCAACAGCTGCCGTGTGTGTGTGTGTGTaGAGGCAAACCTCCTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: TSGTNGGLTLTLVTATAAVCVCV*RQTSLS Trigger: ACTTAAGGAGGTTTGCCTTCACACACACACACACAC...GGCAGCTGTTGCTGTTACTAAAGTAAGAGTAAGACCACCATTAGTACCAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR TCA 90 bp | TTGGGCCTTGTGAGCTCACGTGTAAGAGAGAGAAGTCATTCAGGATATTTTGCGTCATGCTTTCTGGGCTaGAAAGCCAACCACATTTTT | + |
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Preference number: 2 (lower is better) Translates to: LGLVSSRVRERSHSGYFASCFLG*KANHIF Trigger: AAAAATGTGGTTGGCTTTTCAGCCCAGAAAGCATGA...CGCAAAATATCCTGAATGACTTCTCTCTCTTACACGTGAGCTCACAAGGCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR CCA 90 bp | AATATGCAAGCCAACAGATACAAAACAATGCCATGTGCCACCCAAGGCACTCAAACCAAGACACTTGTGTaGTTCTCTGTCAGTAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: NMQANRYKTMPCATQGTQTKTLV*FSVSKQ Trigger: CTGCTTACTGACAGAGAACCACACAAGTGTCTTGGT...TTGAGTGCCTTGGGTGGCACATGGCATTGTTTTGTATCTGTTGGCTTGCATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCCTTGTGAGCTCACGTGTAAGAGAGAGAAGTCATTCAGGATATTTTGCGTTACAGACAGATATCTaGGTGGCACATCTTGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LGLVSSRVRERSHSGYFALQTDI*VAHLEL Trigger: CAACTCAAGATGTGCCACCCAGATATCTGTCTGTAA...CGCAAAATATCCTGAATGACTTCTCTCTCTTACACGTGAGCTCACAAGGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR CAA 90 bp | GCAACTCTGAAATGTATAAAAAGATTTCGAAGTCAACCAAGACACTaGTGTGGTTCTCTGTCAGTAAGCAGGAAGGCTGCGGGATTGAAG | + |
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Preference number: 2 (lower is better) Translates to: ATLKCIKRFRSQPRH*CGSLSVSRKAAGLK Trigger: CTTCAATCCCGCAGCCTTCCTGCTTACTGACAGAGAACCACACAAGTGTCTTGGTTGACTTCGAAATCTTTTTATACATTTCAGAGTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR TCA 90 bp | AATATGCAAGCCAACAGATACAAAACAATGCCATGTGCCACCCAAGGCACTCAAGAAAGGATGCCTTTTTaGACAGTTCACAGGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: NMQANRYKTMPCATQGTQERMPF*TVHREM Trigger: CATTTCCCTGTGAACTGTTCAAAAAGGCATCCTTTC...TTGAGTGCCTTGGGTGGCACATGGCATTGTTTTGTATCTGTTGGCTTGCATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR TCA 90 bp | TTGGGCCTTGTGAGCTCACGTGTAAGAGAGAGAAGTCATTCAGGATATTTTGCGTGTGAATACCAACACTaGGAAATGCATGCCATCAAA | + |
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Preference number: 2 (lower is better) Translates to: LGLVSSRVRERSHSGYFACEYQH*EMHAIK Trigger: TTTGATGGCATGCATTTCTCAGTGTTGGTATTCACA...CGCAAAATATCCTGAATGACTTCTCTCTCTTACACGTGAGCTCACAAGGCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR GCA 90 bp | TATAAAAAGATTTCGAAGTCAACCAAGACACTTGTGTGGTTCTCTGTCAGTAAGAGGGAGGCATGTCATTaGTGGGTAAGGCACTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: YKKISKSTKTLVWFSVSKREACH*WVRHSL Trigger: GAGAGAGTGCCTTACCCAGCAATGACATGCCTCCCT...CTTACTGACAGAGAACCACACAAGTGTCTTGGTTGACTTCGAAATCTTTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR GCA 90 bp | ATGACAGTGAAAGCTCAAATCCAGGACAAGTCAGGTCTCTCAAGTATACATACAAGGCCAGTTGGAACATaGCAAATGGTTTTGTACACC | + |
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Preference number: 2 (lower is better) Translates to: MTVKAQIQDKSGLSSIHTRPVGT*QMVLYT Trigger: GGTGTACAAAACCATTTGGCATGTTCCAACTGGCCT...TGTATGTATACTTGAGAGACCTGACTTGTCCTGGATTTGAGCTTTCACTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| 3UTR-3UTR GCA 90 bp | TATAAAAAGATTTCGAAGTCAACCAAGACACTTGTGTGGTTCTCTGTCAGTAAGGGAAGTCAGAGATCCTaGTCTGTCAGGCAGAATTTC | + |
|
Preference number: 2 (lower is better) Translates to: YKKISKSTKTLVWFSVSKGSQRS*SVRQNF Trigger: GAAATTCTGCCTGACAGAGCAGGATCTCTGACTTCC...CTTACTGACAGAGAACCACACAAGTGTCTTGGTTGACTTCGAAATCTTTTTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR-3UTR GCA 90 bp | TATAAAAAGATTTCGAAGTCAACCAAGACACTTGTGTGGTTCTCTGTCAGTAAGAGAAAAACAAACTACTaGTGTGTGTGTAGGGGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YKKISKSTKTLVWFSVSKRKTNY*CVCRGP Trigger: TGGCCCCCTACACACACAGCAGTAGTTTGTTTTTCT...CTTACTGACAGAGAACCACACAAGTGTCTTGGTTGACTTCGAAATCTTTTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR-3UTR GCA 90 bp | ATGACAGTGAAAGCTCAAATCCAGGACAAGTCAGGTCTCTCAAGTATACATACAAGGGTACTGAAAGGATaGCTTTTTGAACAGTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: MTVKAQIQDKSGLSSIHTRVLKG*LFEQFT Trigger: TGTGAACTGTTCAAAAAGGCATCCTTTCAGTACCCT...TGTATGTATACTTGAGAGACCTGACTTGTCCTGGATTTGAGCTTTCACTGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR-3UTR CCA 90 bp | CTTAAGACATTTGAATGTACCTCAATGAAGCTGTGTCTCACACACGATGACACAAATTCTAGCAGATATTaGCAATGGGTTAATTCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LKTFECTSMKLCLTHDDTNSSRY*QWVNSA Trigger: TGCTGAATTAACCCATTGCCAATATCTGCTAGAATT...TGTGTCATCGTGTGTGAGACACAGCTTCATTGAGGTACATTCAAATGTCTTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | CCAAGGAGACAGGACCAGAAAGTCACACTCTGGGGCTaGTATGGTGATGTCCGTCACCAGGGTGCTTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PRRQDQKVTLWG*YGDVRHQGACP Trigger: AGGGCAAGCACCCTGGTGACGGACATCACCATAGCAGCCCCAGAGTGTGACTTTCTGGTCCTGTCTCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR TCA 72 bp | ACAGGACCAGAAAGTCACACTCTGGGGCTGCTATGGTaGTGTCCGTCACCAGGGTGCTTGCCCTCTCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TGPESHTLGLLW*CPSPGCLPSPD Trigger: ATCTGGAGAGGGCAAGCACCCTGGTGACGGACATCACCATAGCAGCCCCAGAGTGTGACTTTCTGGTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CCA 72 bp | CAAAGTCCAAGGAGACAGGACCAGAAAGTCACACTCTaGGGCTGCTATGGTGATGTCCGTCACCAGGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSPRRQDQKVTL*GCYGDVRHQGA Trigger: AGCACCCTGGTGACGGACATCACCATAGCAGCCCCAGAGTGTGACTTTCTGGTCCTGTCTCCTTGGACTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CCA 72 bp | GGGACCCGGAAGGATGCTGTCTCTAGTCAGGAGCTCTaGTCCTTTCTTGGTGACGGTCACAATGGAGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GTRKDAVSSQEL*SFLGDGHNGGS Trigger: ACTTCCTCCATTGTGACCGTCACCAAGAAAGGACCAGAGCTCCTGACTAGAGACAGCATCCTTCCGGGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CCA 72 bp | ACAACTGGCAGGAGTTGGTTCTCTCCTCCCACAGCATaGGTTCCAGTCATCTCGCTGGCCCTCAAATACGAC | + |
|
Preference number: 3 (lower is better) Translates to: TTGRSWFSPPTA*VPVISLALKYD Trigger: GTCGTATTTGAGGGCCAGCGAGATGACTGGAACCCATGCTGTGGGAGGAGAGAACCAACTCCTGCCAGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| 3UTR CCA 72 bp | CACATGTGTGGAGGTCAGAGAACAACTGGCAGGAGTTaGTTCTCTCCTCCCACAGCATGGGTTCCAGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: HMCGGQRTTGRS*FSPPTAWVPVI Trigger: GATGACTGGAACCCATGCTGTGGGAGGAGAGAACCAACTCCTGCCAGTTGTTCTCTGACCTCCACACATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| 3UTR TCA 72 bp | ACTGCTGTGTGTGTAGGGGGCCAAGCCTCTGTGGGCTaGGACTGCTGCCCTACAGAAATTAGAGAAATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TAVCVGGQASVG*DCCPTEIREIE Trigger: CTCAATTTCTCTAATTTCTGTAGGGCAGCAGTCTCAGCCCACAGAGGCTTGGCCCCCTACACACACAGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | AAAGGATGCCTTTTTGAACAGTTCACAGGGAAATGCTaGCCACCAAGCTCTCGGGGACAAGAGAAGCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: KGCLFEQFTGKC*PPSSRGQEKPE Trigger: CTCGGGCTTCTCTTGTCCCCGAGAGCTTGGTGGGCAGCATTTCCCTGTGAACTGTTCAAAAAGGCATCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | CTGAAAGGATGCCTTTTTGAACAGTTCACAGGGAAATaGTGCCCACCAAGCTCTCGGGGACAAGAGAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LKGCLFEQFTGK*CPPSSRGQEKP Trigger: GGGCTTCTCTTGTCCCCGAGAGCTTGGTGGGCAGCATTTCCCTGTGAACTGTTCAAAAAGGCATCCTTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | CTTCCAGACCAGGGCTCACATAGGGAGGCATGTCATTaGTGGGTAAGGCACTCTCTCTCTTTAGAGCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LPDQGSHREACH*WVRHSLSLELN Trigger: ATTCAGCTCTAAAGAGAGAGAGTGCCTTACCCAGCAATGACATGCCTCCCTATGTGAGCCCTGGTCTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | CTTGGTGACGGTCACAATGGAGGAAGTCAGAGATCCTaGTCTGTCAGGCAGAATTTCTGTGCTCACCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LGDGHNGGSQRS*SVRQNFCAHHR Trigger: TCTGTGGTGAGCACAGAAATTCTGCCTGACAGAGCAGGATCTCTGACTTCCTCCATTGTGACCGTCACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | ACACTTGTGTGGTTCTCTGTCAGTAAGCAGGAAGGCTaGGGGATTGAAGGAGGAGTCTGGATTAGGCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: TLVWFSVSKQEG*GIEGGVWIRHS Trigger: ACTGTGCCTAATCCAGACTCCTCCTTCAATCCCGCAGCCTTCCTGCTTACTGACAGAGAACCACACAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CCA 72 bp | GGGACAAGCTCAGGTTCTACAAACTCCCAGGCCAGTTaGAACATGCCAAATGGTTTTGTACACCAGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GTSSGSTNSQAS*NMPNGFVHQPL Trigger: CAGTGGCTGGTGTACAAAACCATTTGGCATGTTCCAACTGGCCTGGGAGTTTGTAGAACCTGAGCTTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR TCA 72 bp | ACTAACCAGGGACAGGGTACTGAAAGGATGCCTTTTTaGACAGTTCACAGGGAAATGCTGCCCACCAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TNQGQGTERMPF*TVHREMLPTKL Trigger: GAGCTTGGTGGGCAGCATTTCCCTGTGAACTGTTCAAAAAGGCATCCTTTCAGTACCCTGTCCCTGGTTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | CTTTGGCAACGTTGCATCTGTGAATGGAGCAAGGATTaGATACCGAGAAGGTGGTTTGTGGCCATCAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LWQRCICEWSKD*IPRRWFVAISD Trigger: GTCACTGATGGCCACAAACCACCTTCTCGGTATGCAATCCTTGCTCCATTCACAGATGCAACGTTGCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CCA 72 bp | CCAGACCAGGGCTCACATAGGGAGGCATGTCATTGCTaGGTAAGGCACTCTCTCTCTTTAGAGCTGAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: PDQGSHREACHC*VRHSLSLELNF Trigger: AAAATTCAGCTCTAAAGAGAGAGAGTGCCTTACCCAGCAATGACATGCCTCCCTATGTGAGCCCTGGTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGCCTTGTGAGCTCACGTGTAAGAGAGAGAAGTCATTCAGGATATTTTGCGAGAAAGCCACTGCTTTaGGGCCTCATAGTCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGLVSSRVRERSHSGYFARKPLL*GLIVSQ Trigger: CTGGCTGACTATGAGGCCCAAAAGCAGTGGCTTTCT...CGCAAAATATCCTGAATGACTTCTCTCTCTTACACGTGAGCTCACAAGGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | AGAGAGACACTAACCAGGGACAGGGTACTGAAAGGATaGCTTTTTGAACAGTTCACAGGGAAATGCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RETLTRDRVLKG*LFEQFTGKCCP Trigger: TGGGCAGCATTTCCCTGTGAACTGTTCAAAAAGGCATCCTTTCAGTACCCTGTCCCTGGTTAGTGTCTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CCA 72 bp | AATGGAGCAAGGATTGCATACCGAGAAGGTGGTTTGTaGCCATCAGTGACCCTCACAGACCCAAAACTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: NGARIAYREGGL*PSVTLTDPKLL Trigger: TAGAAGTTTTGGGTCTGTGAGGGTCACTGATGGCCACAAACCACCTTCTCGGTATGCAATCCTTGCTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR-3UTR CAA 90 bp | ATTGAATACAGACAGGATTTGGCAGAGAGCAACATCTCAGGCCATTACAGACAGAGCTCTGGTCCTTTCTaGGTGACGGTCACAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IEYRQDLAESNISGHYRQSSGPF*VTVTME Trigger: CTCCATTGTGACCGTCACCAAGAAAGGACCAGAGCT...CTGTCTGTAATGGCCTGAGATGTTGCTCTCTGCCAAATCCTGTCTGTATTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCTGGTACTAATGGTGGTCTTACTCTTACTTTAGTAACAGCAACAGCTGCCGACATCCTGTCTGGCTaGGCTGAAGCTTCTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TSGTNGGLTLTLVTATAADILSG*AEASLW Trigger: CCAAAGAGAAGCTTCAGCCAAGCCAGACAGGATGTC...GGCAGCTGTTGCTGTTACTAAAGTAAGAGTAAGACCACCATTAGTACCAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR-3UTR CAA 90 bp | CACTTGCACAAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCAGGAGTGTAGATTTAAGTTTCTaGTCTTCTAACCAAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HLHKLWHMCGGQRTTGRSVDLSF*SSNQEP Trigger: TGGCTCTTGGTTAGAAGACAAGAAACTTAAATCTAC...ACTCCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTTGTGCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAAATGACATTTATTCAGGTGAGTGCACACTTGCACAAGCTGTGGCACATGAACAACTGGCAGGAGTaGGTTCTCTCCTCCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: FKMTFIQVSAHLHKLWHMNNWQE*VLSSHS Trigger: GCTGTGGGAGGAGAGAACCAACTCCTGCCAGTTGTT...CATGTGCCACAGCTTGTGCAAGTGTGCACTCACCTGAATAAATGTCATTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| 3UTR GCA 72 bp | AAATTCAAGACCACTCTGGGGTACCCAAGGAGACCCTaGCTCAAAAGCACAAATATGCAAGCCAACAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: KFKTTLGYPRRP*LKSTNMQANRY Trigger: GTATCTGTTGGCTTGCATATTTGTGCTTTTGAGGCAGGGTCTCCTTGGGTACCCCAGAGTGGTCTTGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR-3UTR CAA 90 bp | ATTGAATACAGACAGGATTTGGCAGAGAGCAACATCTCAGGCCATTACAGACAGAAACTCCCAGGCCAGTaGGAACATGCCAAATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IEYRQDLAESNISGHYRQKLPGQ*EHAKWF Trigger: AAACCATTTGGCATGTTCCAACTGGCCTGGGAGTTT...CTGTCTGTAATGGCCTGAGATGTTGCTCTCTGCCAAATCCTGTCTGTATTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | GCTCAGGTTCTACAAACTCCCAGGCCAGTTGGAACATaGCAAATGGTTTTGTACACCAGCCACTGTATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: AQVLQTPRPVGT*QMVLYTSHCIL Trigger: TAAAATACAGTGGCTGGTGTACAAAACCATTTGGCATGTTCCAACTGGCCTGGGAGTTTGTAGAACCTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CCA 72 bp | CTGATAGGGAGGCTTCTATTGAATACAGACAGGATTTaGCAGAGAGCAACATCTCAGGCCATTACAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LIGRLLLNTDRI*QRATSQAITDR Trigger: TCTGTCTGTAATGGCCTGAGATGTTGCTCTCTGCCAAATCCTGTCTGTATTCAATAGAAGCCTCCCTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CCA 72 bp | AGAAATGCATGCCATCAAAACAGATGCCCAAGCGTTTaGGCATACACACTAGAAGGTATGAGTTACTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RNACHQNRCPSV*AYTLEGMSYLG Trigger: CCCCAAGTAACTCATACCTTCTAGTGTGTATGCCCAAACGCTTGGGCATCTGTTTTGATGGCATGCATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR TCA 72 bp | TTCAGCAGCTGTCAGCCACAAACTAAAGGCCACAGATaGACTAAGTTCTCCAAGAAGTTAGACACACACAAC | + |
|
Preference number: 3 (lower is better) Translates to: FSSCQPQTKGHR*TKFSKKLDTHN Trigger: GTTGTGTGTGTCTAACTTCTTGGAGAACTTAGTTCATCTGTGGCCTTTAGTTTGTGGCTGACAGCTGCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR TCA 72 bp | CAGGCCATTACAGACAGATATCTGGGTGGCACATCTTaGGTTGAGAGTATAAGAAAATGTGGAACAAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QAITDRYLGGTS*VESIRKCGTKP Trigger: GGGCTTTGTTCCACATTTTCTTATACTCTCAACTCAAGATGTGCCACCCAGATATCTGTCTGTAATGGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR TCA 72 bp | TATAAACGAGGCATAACCGGATGTGAATACCAACACTaGGAAATGCATGCCATCAAAACAGATGCCCAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: YKRGITGCEYQH*EMHAIKTDAQA Trigger: CGCTTGGGCATCTGTTTTGATGGCATGCATTTCTCAGTGTTGGTATTCACATCCGGTTATGCCTCGTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | GTGACAGCATGTATGGCAAAGGAAACTGCGTGTCACTaGTCATCTCAGATCAACATAGCACATGTACCATTT | + |
|
Preference number: 3 (lower is better) Translates to: VTACMAKETACH*SSQINIAHVPF Trigger: AAATGGTACATGTGCTATGTTGATCTGAGATGAGCAGTGACACGCAGTTTCCTTTGCCATACATGCTGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR GCA 72 bp | ATACCAACACTGAGAAATGCATGCCATCAAAACAGATaGCCAAGCGTTTGGGCATACACACTAGAAGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: IPTLRNACHQNR*PSVWAYTLEGM Trigger: CATACCTTCTAGTGTGTATGCCCAAACGCTTGGGCATCTGTTTTGATGGCATGCATTTCTCAGTGTTGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR-3UTR CAA 90 bp | AATATGCAAGCCAACAGATACAAAACAATGCCATGTGCCACCCAAGGCACTCAAACCTTTTCAATTCTGTaGGCTAAATTCCATCGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: NMQANRYKTMPCATQGTQTFSIL*AKFHRP Trigger: AGGGCGATGGAATTTAGCCAACAGAATTGAAAAGGT...TTGAGTGCCTTGGGTGGCACATGGCATTGTTTTGTATCTGTTGGCTTGCATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CCA 72 bp | TTCTACAAACTCCCAGGCCAGTTGGAACATGCCAAATaGTTTTGTACACCAGCCACTGTATTTTATCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: FYKLPGQLEHAK*FCTPATVFYHK Trigger: CTTGTGATAAAATACAGTGGCTGGTGTACAAAACCATTTGGCATGTTCCAACTGGCCTGGGAGTTTGTAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR TCA 72 bp | CATTACAGACAGATATCTGGGTGGCACATCTTGAGTTaGGAGTATAAGAAAATGTGGAACAAAGCCCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HYRQISGWHILS*EYKKMWNKALS Trigger: GGAAAGGGCTTTGTTCCACATTTTCTTATACTCTCAACTCAAGATGTGCCACCCAGATATCTGTCTGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CCA 72 bp | AGTGAAACCAATCAAAGCCCAAATTCTAGCAGATATTaGCAATGGGTTAATTCAGCAGCTGTCAGCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: SETNQSPNSSRY*QWVNSAAVSHK Trigger: TTTGTGGCTGACAGCTGCTGAATTAACCCATTGCCAATATCTGCTAGAATTTGGGCTTTGATTGGTTTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR TCA 72 bp | TTAGATGCATCCTTAAGACATTTGAATGTACCTCAATaGAGCTGTGTCTCACACACGATGACACACACAACA | + |
|
Preference number: 3 (lower is better) Translates to: LDASLRHLNVPQ*SCVSHTMTHTT Trigger: TGTTGTGTGTGTCATCGTGTGTGAGACACAGCTTCATTGAGGTACATTCAAATGTCTTAAGGATGCATCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR TCA 72 bp | AATGAAAGCGCCAATTTGAGGGTTTTCCAAATAGCTTaGGTCTCAGGATATAACCGCATAACTTGGCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: NESANLRVFQIA*VSGYNRITWPF Trigger: AAATGGCCAAGTTATGCGGTTATATCCTGAGACTCAAGCTATTTGGAAAACCCTCAAATTGGCGCTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTCAAGTATACATACACTAGGGCCCAGCTCTGGCACCCTCCAGCAAGAATCCTCGCGCGCGCGCTaGTCGAAGTCCTGGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSSIHTLGPSSGTLQQESSRAR*SKSWPW Trigger: CCACGGCCAGGACTTCGACCAGCGCGCGCGCGAGGA...TTCTTGCTGGAGGGTGCCAGAGCTGGGCCCTAGTGTATGTATACTTGAGAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | CACTTGCACAAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCAGGAGTTCCTCGCGCGCGCGCTaGTCGAAGTCCTGGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLHKLWHMCGGQRTTGRSSSRAR*SKSWPW Trigger: CCACGGCCAGGACTTCGACCAGCGCGCGCGCGAGGA...ACTCCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTTGTGCAAGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR GCA 90 bp | TTGCACAAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCAGGAGTTGGTCCTTGGACTTGCGCTaGTGCTCGGCCTCGCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHKLWHMCGGQRTTGRSWSLDLR*CSASPF Trigger: GAACGGCGAGGCCGAGCAGCAGCGCAAGTCCAAGGA...CCAACTCCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTTGTGCAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR GCA 90 bp | AAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCAGGAGTTGGTTCTCTTTGGACTTGCGCTGCTaGTCGGCCTCGCCGTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLWHMCGGQRTTGRSWFSLDLRC*SASPFV Trigger: GACGAACGGCGAGGCCGAGCAGCAGCGCAAGTCCAA...AGAGAACCAACTCCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR CCA 90 bp | AAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCAGGAGTTGGTTCTCTTCCCCTGGGCAGCCATaGGGGCGCGGGTATCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KLWHMCGGQRTTGRSWFSSPGQP*GRGYQM Trigger: CATTTGATACCCGCGCCCCCATGGCTGCCCAGGGGA...AGAGAACCAACTCCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR CCA 90 bp | GGGGCTAAAGGAAGAAGACCCAACAGTGGTTCTCTCCAGCAAGGCACAAAGTCCGCGGTGGTGAAGTGGTaGTACAACGGCCTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAKGRRPNSGSLQQGTKSAVVKW*YNGLCC Trigger: GCAGCAGAGGCCGTTGTACCACCACTTCACCACCGC...GGACTTTGTGCCTTGCTGGAGAGAACCACTGTTGGGTCTTCTTCCTTTAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | ACAGCCCTTCCAGACCAGGGCTCACATAGGGAGGCATGTCATTGCTGGGTAAGGATTTGTCGATCTCCTTaGACTTGCGCTGCTGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TALPDQGSHREACHCWVRICRSP*TCAAAR Trigger: CCGAGCAGCAGCGCAAGTCCAAGGAGATCGACAAAT...CCTTACCCAGCAATGACATGCCTCCCTATGTGAGCCCTGGTCTGGAAGGGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR TCA 90 bp | TACACTAGGGCCCAGCTCTGGCACCCTCCAGCAAGAAAAGAAGAAAGCCACTGCTCTCCCCAGGGAATATaGAGCTTCTCTCGGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YTRAQLWHPPARKEESHCSPQGI*SFSRAS Trigger: AGATGCCCGAGAGAAGCTTCATATTCCCTGGGGAGA...GCAGTGGCTTTCTTCTTTTCTTGCTGGAGGGTGCCAGAGCTGGGCCCTAGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR GCA 90 bp | CTGCAGGGACCCGGAAGGATGCTGTCTCTAGTCAGGAGCTCTGGTCCTTTCTTGGGCGCGGGTATCAAATaGCATCAACTTGTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LQGPGRMLSLVRSSGPFLGAGIK*HQLVSM Trigger: CATGGAGACAAGTTGATGGCATTTGATACCCGCGCC...CAAGAAAGGACCAGAGCTCCTGACTAGAGACAGCATCCTTCCGGGTCCCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR TCA 90 bp | TTGCACAAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCAGGAGTTGGTCTCCCCAGGGAATATaGAGCTTCTCTCGGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LHKLWHMCGGQRTTGRSWSPQGI*SFSRAS Trigger: AGATGCCCGAGAGAAGCTTCATATTCCCTGGGGAGA...CCAACTCCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTTGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCACACTTGCACAAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCATTTGTCGATCTCCTTaGACTTGCGCTGCTGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SAHLHKLWHMCGGQRTTGICRSP*TCAAAR Trigger: CCGAGCAGCAGCGCAAGTCCAAGGAGATCGACAAAT...GCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTTGTGCAAGTGTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| 3UTR CAA 72 bp | GCACCCTCCAGCAAGAAAAGAAGAAAGCCACTGCTTTaGGGCCTCATAGTCAGCCAGTCTTTCAGGGCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: APSSKKRRKPLL*GLIVSQSFRAQ Trigger: TTGCGCCCTGAAAGACTGGCTGACTATGAGGCCCAAAAGCAGTGGCTTTCTTCTTTTCTTGCTGGAGGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CAA 72 bp | TGTGGTTCTCTGTCAGTAAGCAGGAAGGCTGCGGGATaGAAGGAGGAGTCTGGATTAGGCACAGTCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGSLSVSRKAAG*KEESGLGTVTP Trigger: TGGAGTGACTGTGCCTAATCCAGACTCCTCCTTCAATCCCGCAGCCTTCCTGCTTACTGACAGAGAACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR GCA 90 bp | ATTGAATACAGACAGGATTTGGCAGAGAGCAACATCTCAGGCCATTACAGACAGTTGGACTTGCGCTGCTaGTCGGCCTCGCCGTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IEYRQDLAESNISGHYRQLDLRC*SASPFV Trigger: GACGAACGGCGAGGCCGAGCAGCAGCGCAAGTCCAA...CTGTCTGTAATGGCCTGAGATGTTGCTCTCTGCCAAATCCTGTCTGTATTCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCAGGAGTTGGTTCTCTCCATAGCAGGAAGATACTaGAGGAACACTCGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVAHVWRSENNWQELVLSIAGRY*RNTRVS Trigger: GGAGACTCGAGTGTTCCTGCAGTATCTTCCTGCTAT...GGAGAGAACCAACTCCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR GCA 90 bp | GAGACACTAACCAGGGACAGGGTACTGAAAGGATGCCTTTTTGAACAGTTCACATGGTACAACGGCCTCTaGTGCTGGTCCCGGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETLTRDRVLKGCLFEQFTWYNGL*CWSRRF Trigger: GAAACGCCGGGACCAGCAGCAGAGGCCGTTGTACCA...TGTGAACTGTTCAAAAAGGCATCCTTTCAGTACCCTGTCCCTGGTTAGTGTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | CTTAAGACATTTGAATGTACCTCAATGAAGCTGTGTCTCACACACGATGACACAAACGGCCTCTGCTGCTaGTCCCGGCGTTTCCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LKTFECTSMKLCLTHDDTNGLCC*SRRFPR Trigger: CCGGGGGAAACGCCGGGACCAGCAGCAGAGGCCGTT...TGTGTCATCGTGTGTGAGACACAGCTTCATTGAGGTACATTCAAATGTCTTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR TCA 90 bp | TCTAGTCAGGAGCTCTGGTCCTTTCTTGGTGACGGTCACAATGGAGGAAGTCAGGCACCCTCATACCTTTaGTCACGTTGCTGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQELWSFLGDGHNGGSQAPSYL*SRCCRW Trigger: CCATCTACAGCAACGTGATCAAAGGTATGAGGGTGC...CTGACTTCCTCCATTGTGACCGTCACCAAGAAAGGACCAGAGCTCCTGACTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CAA 72 bp | AGGATGCTGTCTCTAGTCAGGAGCTCTGGTCCTTTCTaGGTGACGGTCACAATGGAGGAAGTCAGAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMLSLVRSSGPF*VTVTMEEVRDP Trigger: AGGATCTCTGACTTCCTCCATTGTGACCGTCACCAAGAAAGGACCAGAGCTCCTGACTAGAGACAGCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR GCA 90 bp | TGCATCCTTAAGACATTTGAATGTACCTCAATGAAGCTGTGTCTCACACACGATTCCTTGGACTTGCGCTaGTGCTCGGCCTCGCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CILKTFECTSMKLCLTHDSLDLR*CSASPF Trigger: GAACGGCGAGGCCGAGCAGCAGCGCAAGTCCAAGGA...ATCGTGTGTGAGACACAGCTTCATTGAGGTACATTCAAATGTCTTAAGGATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | TTGGGCCTTGTGAGCTCACGTGTAAGAGAGAGAAGTCATTCAGGATATTTTGCGGTAAGGCGATTGGTCTaGCGGTCCTCCATAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LGLVSSRVRERSHSGYFAVRRLV*RSSIST Trigger: GGTGCTTATGGAGGACCGCCAGACCAATCGCCTTAC...CGCAAAATATCCTGAATGACTTCTCTCTCTTACACGTGAGCTCACAAGGCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CAA 72 bp | AGGGACAAGCTCAGGTTCTACAAACTCCCAGGCCAGTaGGAACATGCCAAATGGTTTTGTACACCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RDKLRFYKLPGQ*EHAKWFCTPAT Trigger: AGTGGCTGGTGTACAAAACCATTTGGCATGTTCCAACTGGCCTGGGAGTTTGTAGAACCTGAGCTTGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CAA 72 bp | GCAACAGCTGCCACTAACGTAACAAGCATTTCCCTGTaGAGTCCCAACTTGAGAACTTCACCAGAGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATAATNVTSISL*SPNLRTSPEDP Trigger: AGGGTCCTCTGGTGAAGTTCTCAAGTTGGGACTCAACAGGGAAATGCTTGTTACGTTAGTGGCAGCTGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CAA 72 bp | ACTAACGTAACAAGCATTTCCCTGTTGAGTCCCAACTaGAGAACTTCACCAGAGGACCCTTTGGGTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TNVTSISLLSPN*RTSPEDPLGVE Trigger: CTCCACACCCAAAGGGTCCTCTGGTGAAGTTCTCAAGTTGGGACTCAACAGGGAAATGCTTGTTACGTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | TTCACTGCACTTAGTTGTGGCCAATGCACAATAATGTTTGCTAAATTAACACAGTCCCCTGGGCAGCCATaGGGGCGCGGGTATCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FTALSCGQCTIMFAKLTQSPGQP*GRGYQM Trigger: CATTTGATACCCGCGCCCCCATGGCTGCCCAGGGGA...CTGTGTTAATTTAGCAAACATTATTGTGCATTGGCCACAACTAAGTGCAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | TTGGGCCTTGTGAGCTCACGTGTAAGAGAGAGAAGTCATTCAGGATATTTTGCGCTTTGGTGGGCCTTCTaGCAAGCAGGATATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLVSSRVRERSHSGYFALWWAF*QAGYLA Trigger: AGCAAGATATCCTGCTTGCCAGAAGGCCCACCAAAG...CGCAAAATATCCTGAATGACTTCTCTCTCTTACACGTGAGCTCACAAGGCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR GCA 90 bp | ACCAACACTGAGAAATGCATGCCATCAAAACAGATGCCCAAGCGTTTGGGCATAATAGCAGGAAGATACTaGAGGAACACTCGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNTEKCMPSKQMPKRLGIIAGRY*RNTRVS Trigger: GGAGACTCGAGTGTTCCTGCAGTATCTTCCTGCTAT...TATGCCCAAACGCTTGGGCATCTGTTTTGATGGCATGCATTTCTCAGTGTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | AGTGCACACTTGCACAAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCATCAACTTGTCTCCATaGAGCTGGTTTTTGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SAHLHKLWHMCGGQRTTGINLSP*SWFLLS Trigger: AGATAACAAAAACCAGCTCCATGGAGACAAGTTGAT...GCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTTGTGCAAGTGTGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR CCA 90 bp | TTGGGCCTTGTGAGCTCACGTGTAAGAGAGAGAAGTCATTCAGGATATTTTGCGACGTCTCTTAAGCAGTaGGGGTCCCCTTCAAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLVSSRVRERSHSGYFATSLKQ*GSPSNS Trigger: AGAATTTGAAGGGGACCCCCACTGCTTAAGAGACGT...CGCAAAATATCCTGAATGACTTCTCTCTCTTACACGTGAGCTCACAAGGCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR TCA 90 bp | AAAATGACATTTATTCAGGTGAGTGCACACTTGCACAAGCTGTGGCACATGTGTGCACCCTCATACCTTTaGTCACGTTGCTGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KMTFIQVSAHLHKLWHMCAPSYL*SRCCRW Trigger: CCATCTACAGCAACGTGATCAAAGGTATGAGGGTGC...ACACATGTGCCACAGCTTGTGCAAGTGTGCACTCACCTGAATAAATGTCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR CCA 90 bp | CTTAAGACATTTGAATGTACCTCAATGAAGCTGTGTCTCACACACGATGACACAACTCATGGATGCCTTTaGTGGGCCTTCTGGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKTFECTSMKLCLTHDDTTHGCL*WAFWQA Trigger: TGCTTGCCAGAAGGCCCACCAAAGGCATCCATGAGT...TGTGTCATCGTGTGTGAGACACAGCTTCATTGAGGTACATTCAAATGTCTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CAA 72 bp | CAAACTCCCAGGCCAGTTGGAACATGCCAAATGGTTTaGTACACCAGCCACTGTATTTTATCACAAGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: QTPRPVGTCQMV*YTSHCILSQAT Trigger: GGTAGCTTGTGATAAAATACAGTGGCTGGTGTACAAAACCATTTGGCATGTTCCAACTGGCCTGGGAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CAA 72 bp | GAGAAATGCATGCCATCAAAACAGATGCCCAAGCGTTaGGGCATACACACTAGAAGGTATGAGTTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKCMPSKQMPKR*GIHTRRYELLG Trigger: CCCAAGTAACTCATACCTTCTAGTGTGTATGCCCAAACGCTTGGGCATCTGTTTTGATGGCATGCATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | AATATGCAAGCCAACAGATACAAAACAATGCCATGTGCCACCCAAGGCACTCAATTGTCTCCATGGAGCTaGTTTTTGTTATCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NMQANRYKTMPCATQGTQLSPWS*FLLSPQ Trigger: CTGGGGAGATAACAAAAACCAGCTCCATGGAGACAA...TTGAGTGCCTTGGGTGGCACATGGCATTGTTTTGTATCTGTTGGCTTGCATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CAA 72 bp | AAGACAAAACAAGTGGTAATCTCTGCAGTTGGGAAGTaGAGCCAGGAGGATCTCAAATTCAAGACCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTKQVVISAVGK*SQEDLKFKTTL Trigger: CAGAGTGGTCTTGAATTTGAGATCCTCCTGGCTCAACTTCCCAACTGCAGAGATTACCACTTGTTTTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | CTTAAGACATTTGAATGTACCTCAATGAAGCTGTGTCTCACACACGATGACACATCAAAGTCGTACTCATaGATGCCTTTGGTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKTFECTSMKLCLTHDDTSKSYS*MPLVGL Trigger: AAGGCCCACCAAAGGCATCCATGAGTACGACTTTGA...TGTGTCATCGTGTGTGAGACACAGCTTCATTGAGGTACATTCAAATGTCTTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CAA 72 bp | CCTTTCCAGATAGAAAACCTGATAGGGAGGCTTCTATaGAATACAGACAGGATTTGGCAGAGAGCAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: PFQIENLIGRLL*NTDRIWQRATS Trigger: AGATGTTGCTCTCTGCCAAATCCTGTCTGTATTCAATAGAAGCCTCCCTATCAGGTTTTCTATCTGGAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR GCA 90 bp | ACTTCTGGTACTAATGGTGGTCTTACTCTTACTTTAGTAACAGCAACAGCTGCCTTGATGCTAACAACTTaGACTTTCTCCTCGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGTNGGLTLTLVTATAALMLTT*TFSSSK Trigger: CTTGCTCGAGGAGAAAGTGCAAGTTGTTAGCATCAA...GGCAGCTGTTGCTGTTACTAAAGTAAGAGTAAGACCACCATTAGTACCAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGGTACTAATGGTGGTCTTACTCTTACTTTAGTAACAGCAACAGCTGCCTCCTCCATAAGCACCTaGTCAAATTCACTTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGTNGGLTLTLVTATAASSIST*SNSLEE Trigger: CTCTTCAAGTGAATTTGACCAGGTGCTTATGGAGGA...GGCAGCTGTTGCTGTTACTAAAGTAAGAGTAAGACCACCATTAGTACCAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| 3UTR CAA 72 bp | AAATGTATAAAAAGATTTCGAAGTCAACCAAGACACTaGTGTGGTTCTCTGTCAGTAAGCAGGAAGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KCIKRFRSQPRH*CGSLSVSRKAA Trigger: CGCAGCCTTCCTGCTTACTGACAGAGAACCACACAAGTGTCTTGGTTGACTTCGAAATCTTTTTATACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | TATAAAAAGATTTCGAAGTCAACCAAGACACTTGTGTGGTTCTCTGTCAGTAAGTCCACCAGAAACTTTTaGACGTCTCTTAAGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YKKISKSTKTLVWFSVSKSTRNF*TSLKQW Trigger: CCACTGCTTAAGAGACGTCCAAAAGTTTCTGGTGGA...CTTACTGACAGAGAACCACACAAGTGTCTTGGTTGACTTCGAAATCTTTTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS-3UTR CCA 90 bp | TATAAAAAGATTTCGAAGTCAACCAAGACACTTGTGTGGTTCTCTGTCAGTAAGATCAACTTGTCTCCATaGAGCTGGTTTTTGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: YKKISKSTKTLVWFSVSKINLSP*SWFLLS Trigger: AGATAACAAAAACCAGCTCCATGGAGACAAGTTGAT...CTTACTGACAGAGAACCACACAAGTGTCTTGGTTGACTTCGAAATCTTTTTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS GCA 90 bp | CGTAGGTCTTCTCCCGCGACAGGCATTTGTCGATCTCCTTGGACTTaGGCTGCTGCTCGGCCTCGCCGTTCGTCAGCACGCAGCCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRSSPATGICRSPWT*AAARPRRSSARSPG Trigger: TCCCGGGCTGCGTGCTGACGAACGGCGAGGCCGAGCAGCAGCGCAAGTCCAAGGAGATCGACAAATGCCTGTCGCGGGAGAAGACCTACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020930.14 ENSMUST00000106702.4 |
||
| CDS CCA 90 bp | GCTTCACGTAGGTCTTCTCCCGCGACAGGCATTTGTCGATCTCCTTaGACTTGCGCTGCTGCTCGGCCTCGCCGTTCGTCAGCACGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASRRSSPATGICRSP*TCAAARPRRSSARS Trigger: GCTGCGTGCTGACGAACGGCGAGGCCGAGCAGCAGCGCAAGTCCAAGGAGATCGACAAATGCCTGTCGCGGGAGAAGACCTACGTGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020930.14 ENSMUST00000106702.4 |
||
| CDS-3UTR CAA 90 bp | ACAGCCCTTCCAGACCAGGGCTCACATAGGGAGGCATGTCATTGCTGGGTAAGGTCGATCTCCTTGGACTaGCGCTGCTGCTCGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TALPDQGSHREACHCWVRSISLD*RCCSAS Trigger: CGAGGCCGAGCAGCAGCGCAAGTCCAAGGAGATCGA...CCTTACCCAGCAATGACATGCCTCCCTATGTGAGCCCTGGTCTGGAAGGGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS CCA 90 bp | GATACTGCAGGAACACTCGAGTCTCCACCATCCCCTGGGCAGCCATaGGGGCGCGGGTATCAAATGCCATCAACTTGTCTCCATGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DTAGTLESPPSPGQP*GRGYQMPSTCLHGA Trigger: AGCTCCATGGAGACAAGTTGATGGCATTTGATACCCGCGCCCCCATGGCTGCCCAGGGGATGGTGGAGACTCGAGTGTTCCTGCAGTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020930.14 ENSMUST00000106702.4 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGGACCCGGAAGGATGCTGTCTCTAGTCAGGAGCTCTGGTCCTTTCTTGTCCCGCGACAGGCATTaGTCGATCTCCTTGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LQGPGRMLSLVRSSGPFLSRDRH*SISLDL Trigger: CAAGTCCAAGGAGATCGACAAATGCCTGTCGCGGGA...CAAGAAAGGACCAGAGCTCCTGACTAGAGACAGCATCCTTCCGGGTCCCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS CCA 90 bp | ATAGCAGGAAGATACTGCAGGAACACTCGAGTCTCCACCATCCCCTaGGCAGCCATGGGGGCGCGGGTATCAAATGCCATCAACTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IAGRYCRNTRVSTIP*AAMGARVSNAINLS Trigger: AGACAAGTTGATGGCATTTGATACCCGCGCCCCCATGGCTGCCCAGGGGATGGTGGAGACTCGAGTGTTCCTGCAGTATCTTCCTGCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020930.14 ENSMUST00000106702.4 |
||
| CDS-3UTR CAA 90 bp | ACACTTGCACAAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCAGGAGCCATGGAGCTGGTTTTaGTTATCTCCCCAGGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: TLAQAVAHVWRSENNWQEPWSWF*LSPQGI Trigger: TATTCCCTGGGGAGATAACAAAAACCAGCTCCATGG...CTCCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTTGTGCAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR CAA 90 bp | GCACACTTGCACAAGCTGTGGCACATGTGTGGAGGTCAGAGAACAACTGGCAGGTCAAATGCCATCAACTaGTCTCCATGGAGCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AHLHKLWHMCGGQRTTGRSNAIN*SPWSWF Trigger: AAACCAGCTCCATGGAGACAAGTTGATGGCATTTGA...CCTGCCAGTTGTTCTCTGACCTCCACACATGTGCCACAGCTTGTGCAAGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR CAA 90 bp | TTTAAAATGACATTTATTCAGGTGAGTGCACACTTGCACAAGCTGTGGCACATGTCGATCTCCTTGGACTaGCGCTGCTGCTCGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FKMTFIQVSAHLHKLWHMSISLD*RCCSAS Trigger: CGAGGCCGAGCAGCAGCGCAAGTCCAAGGAGATCGA...CATGTGCCACAGCTTGTGCAAGTGTGCACTCACCTGAATAAATGTCATTTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
||
| CDS-3UTR CAA 90 bp | GGGGCTAAAGGAAGAAGACCCAACAGTGGTTCTCTCCAGCAAGGCACAAAGTCCAGGATTATGGAGACGTaGCTGAAAACCCGATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAKGRRPNSGSLQQGTKSRIMET*LKTRLL Trigger: CAACAATCGGGTTTTCAGCAACGTCTCCATAATCCT...GGACTTTGTGCCTTGCTGGAGAGAACCACTGTTGGGTCTTCTTCCTTTAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
||
| CDS TCA 90 bp | AACTTGTCTCCATGGAGCTGGTTTTTGTTATCTCCCCAGGGAATATaGAGCTTCTCTCGGGCATCTACCAGCACCCTCATACCTTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: NLSPWSWFLLSPQGI*SFSRASTSTLIPLI Trigger: GATCAAAGGTATGAGGGTGCTGGTAGATGCCCGAGAGAAGCTTCATATTCCCTGGGGAGATAACAAAAACCAGCTCCATGGAGACAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020930.14 ENSMUST00000106702.4 |
||
| CDS-3UTR CAA 90 bp | AAAATGACATTTATTCAGGTGAGTGCACACTTGCACAAGCTGTGGCACATGTGTCATTTGTCGATCTCCTaGGACTTGCGCTGCTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: KMTFIQVSAHLHKLWHMCHLSIS*DLRCCS Trigger: CGAGCAGCAGCGCAAGTCCAAGGAGATCGACAAATG...ACACATGTGCCACAGCTTGTGCAAGTGTGCACTCACCTGAATAAATGTCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106702.4 |
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| CDS-3UTR CAA 90 bp | TTGAATACAGACAGGATTTGGCAGAGAGCAACATCTCAGGCCATTACAGACAGAGATTCTGTAAGGCGATaGGTCTGGCGGTCCTCCATA | + |
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Preference number: 5 (lower is better) Translates to: LNTDRIWQRATSQAITDRDSVRR*VWRSSI Trigger: TATGGAGGACCGCCAGACCAATCGCCTTACAGAATC...TCTGTCTGTAATGGCCTGAGATGTTGCTCTCTGCCAAATCCTGTCTGTATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| CDS-3UTR CAA 90 bp | CTTAAGACATTTGAATGTACCTCAATGAAGCTGTGTCTCACACACGATGACACACATTTGTCGATCTCCTaGGACTTGCGCTGCTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: LKTFECTSMKLCLTHDDTHLSIS*DLRCCS Trigger: CGAGCAGCAGCGCAAGTCCAAGGAGATCGACAAATG...TGTGTCATCGTGTGTGAGACACAGCTTCATTGAGGTACATTCAAATGTCTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| CDS-3UTR CAA 90 bp | ATGACAGTGAAAGCTCAAATCCAGGACAAGTCAGGTCTCTCAAGTATACATACATACTCATGGATGCCTTaGGTGGGCCTTCTGGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: MTVKAQIQDKSGLSSIHTYSWMP*VGLLAS Trigger: GCTTGCCAGAAGGCCCACCAAAGGCATCCATGAGTA...TGTATGTATACTTGAGAGACCTGACTTGTCCTGGATTTGAGCTTTCACTGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| CDS-3UTR CAA 90 bp | AATATGCAAGCCAACAGATACAAAACAATGCCATGTGCCACCCAAGGCACTCAACCATGGAGCTGGTTTTaGTTATCTCCCCAGGGAATA | + |
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Preference number: 5 (lower is better) Translates to: NMQANRYKTMPCATQGTQPWSWF*LSPQGI Trigger: TATTCCCTGGGGAGATAACAAAAACCAGCTCCATGG...TTGAGTGCCTTGGGTGGCACATGGCATTGTTTTGTATCTGTTGGCTTGCATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| CDS-3UTR CAA 90 bp | TGCATCCTTAAGACATTTGAATGTACCTCAATGAAGCTGTGTCTCACACACGATTCAAATGCCATCAACTaGTCTCCATGGAGCTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: CILKTFECTSMKLCLTHDSNAIN*SPWSWF Trigger: AAACCAGCTCCATGGAGACAAGTTGATGGCATTTGA...ATCGTGTGTGAGACACAGCTTCATTGAGGTACATTCAAATGTCTTAAGGATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| CDS-3UTR CAA 90 bp | ATGACAGTGAAAGCTCAAATCCAGGACAAGTCAGGTCTCTCAAGTATACATACATCGAGCAAGTCTGTCTaGTTTAAGAAGAGGATTATG | + |
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Preference number: 5 (lower is better) Translates to: MTVKAQIQDKSGLSSIHTSSKSV*FKKRIM Trigger: CATAATCCTCTTCTTAAACAAGACAGACTTGCTCGA...TGTATGTATACTTGAGAGACCTGACTTGTCCTGGATTTGAGCTTTCACTGTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| CDS GCA 72 bp | TCTCCCGCGACAGGCATTTGTCGATCTCCTTGGACTTaGGCTGCTGCTCGGCCTCGCCGTTCGTCAGCACGC | + |
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Preference number: 6 (lower is better) Translates to: SPATGICRSPWT*AAARPRRSSAR Trigger: GCGTGCTGACGAACGGCGAGGCCGAGCAGCAGCGCAAGTCCAAGGAGATCGACAAATGCCTGTCGCGGGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020930.14 ENSMUST00000106702.4 |
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| CDS CCA 72 bp | GCGGTGGTGAAGTGGTGGTACAACGGCCTCTGCTGCTaGTCCCGGCGTTTCCCCCGGAAGCATTCCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: AVVKWWYNGLCC*SRRFPRKHSTR Trigger: TCTGGTGGAATGCTTCCGGGGGAAACGCCGGGACCAGCAGCAGAGGCCGTTGTACCACCACTTCACCACCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| CDS GCA 72 bp | TTGATCGCGGTGGTGAAGTGGTGGTACAACGGCCTCTaGTGCTGGTCCCGGCGTTTCCCCCGGAAGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: LIAVVKWWYNGL*CWSRRFPRKHS Trigger: GGAATGCTTCCGGGGGAAACGCCGGGACCAGCAGCAGAGGCCGTTGTACCACCACTTCACCACCGCGATCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020930.14 |
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| CDS CAA 72 bp | TTCTCCCGCGACAGGCATTTGTCGATCTCCTTGGACTaGCGCTGCTGCTCGGCCTCGCCGTTCGTCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: FSRDRHLSISLD*RCCSASPFVST Trigger: CGTGCTGACGAACGGCGAGGCCGAGCAGCAGCGCAAGTCCAAGGAGATCGACAAATGCCTGTCGCGGGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020930.14 ENSMUST00000106702.4 |
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| CDS CCA 72 bp | AGGTCTTCTCCCGCGACAGGCATTTGTCGATCTCCTTaGACTTGCGCTGCTGCTCGGCCTCGCCGTTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: RSSPATGICRSP*TCAAARPRRSS Trigger: TGACGAACGGCGAGGCCGAGCAGCAGCGCAAGTCCAAGGAGATCGACAAATGCCTGTCGCGGGAGAAGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020930.14 ENSMUST00000106702.4 |
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| CDS CCA 72 bp | GGAACACTCGAGTCTCCACCATCCCCTGGGCAGCCATaGGGGCGCGGGTATCAAATGCCATCAACTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GTLESPPSPGQP*GRGYQMPSTCL Trigger: GAGACAAGTTGATGGCATTTGATACCCGCGCCCCCATGGCTGCCCAGGGGATGGTGGAGACTCGAGTGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020930.14 ENSMUST00000106702.4 |
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| CDS GCA 72 bp | CTGTCCTCCCATAAGGCTCTGATAGCAGGAAGATACTaGAGGAACACTCGAGTCTCCACCATCCCCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSSHKALIAGRY*RNTRVSTIPWA Trigger: TGCCCAGGGGATGGTGGAGACTCGAGTGTTCCTGCAGTATCTTCCTGCTATCAGAGCCTTATGGGAGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020930.14 ENSMUST00000106702.4 |
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