Pregenerated sensors for GNA12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000149Ensembl transcript IDs: ENSMUST00000000153.9, ENSMUST00000198447.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACCCTCATGGACCAGGGCTAGCAGGGTGCCGGCTGGCTTTGCGTaGACAGCGACTATGTGGCCTGCCAGCTACCCTGAGATCAGAGCG | + |
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Preference number: 1 (lower is better) Translates to: APSWTRASRVPAGFA*TATMWPASYPEIRA Trigger: CGCTCTGATCTCAGGGTAGCTGGCAGGCCACATAGTCGCTGTGCACGCAAAGCCAGCCGGCACCCTGCTAGCCCTGGTCCATGAGGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 90 bp | GTGTGGACACCTGACCCCGCCTGCGCCTTTGCGAGACTCGGAGGGTaGTGGCACGATGCTAAGGCTGTGTGTTCACTCTGGGAGGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: VWTPDPACAFARLGG*WHDAKAVCSLWEVA Trigger: TGCCACCTCCCAGAGTGAACACACAGCCTTAGCATCGTGCCAGCACCCTCCGAGTCTCGCAAAGGCGCAGGCGGGGTCAGGTGTCCACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 90 bp | GTCTGTCAGAGGGACAGCGCTCTCCTGGCAACCCCACACTCACCTTaGTCACAGTGGCCCCCAGCAGCGGCTGGGAACAGGTTGTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: VCQRDSALLATPHSP*SQWPPAAAGNRLCL Trigger: CAGACACAACCTGTTCCCAGCCGCTGCTGGGGGCCACTGTGACCAAGGTGAGTGTGGGGTTGCCAGGAGAGCGCTGTCCCTCTGACAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 90 bp | CCAGGTATTAGATGGTGTGGATTCGAGATGCCCACTGCAGGTCCATaGAGGCGGCAGACACACCAGAACCACGTGGGCGGCCACAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: PGIRWCGFEMPTAGP*RRQTHQNHVGGHSP Trigger: GGGGCTGTGGCCGCCCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATCCACACCATCTAATACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| 3UTR CCA 90 bp | AGGGCTAGCAGGGTGCCGGCTGGCTTTGCGTGCACAGCGACTATGTaGCCTGCCAGCTACCCTGAGATCAGAGCGCACTGTGTGAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RASRVPAGFACTATM*PASYPEIRAHCVKA Trigger: TGCCTTCACACAGTGCGCTCTGATCTCAGGGTAGCTGGCAGGCCACATAGTCGCTGTGCACGCAAAGCCAGCCGGCACCCTGCTAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 90 bp | GTCACAGTGGCCCCCAGCAGCGGCTGGGAACAGGTTGTGTCTGTTTaGGGTCTCAGCACTGACAGATCCACAGGGCACCTGGTGAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: VTVAPSSGWEQVVSV*GLSTDRSTGHLVRE Trigger: CTCCCTCACCAGGTGCCCTGTGGATCTGTCAGTGCTGAGACCCCAAACAGACACAACCTGTTCCCAGCCGCTGCTGGGGGCCACTGTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 90 bp | TGTCCCAGCAGAAAGGACACAGCCAGGCTCAGCTCGCCAGGGTGGTaGGCCTCTGCCCATCCACCTGCGTTCTGCTCAGCTAGCTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: CPSRKDTARLSSPGW*ASAHPPAFCSASSS Trigger: ACTTGAGCTAGCTGAGCAGAACGCAGGTGGATGGGCAGAGGCCCACCACCCTGGCGAGCTGAGCCTGGCTGTGTCCTTTCTGCTGGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 90 bp | ACGGTGAGTGTCTCCTGGGCACTAAAGCAGGTTCCTTCTCTACCGTaGGGAGTGTGGACACCTGACCCCGCCTGCGCCTTTGCGAGACTC | + |
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Preference number: 1 (lower is better) Translates to: TVSVSWALKQVPSLP*GVWTPDPACAFARL Trigger: GAGTCTCGCAAAGGCGCAGGCGGGGTCAGGTGTCCACACTCCCCACGGTAGAGAAGGAACCTGCTTTAGTGCCCAGGAGACACTCACCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR TCA 90 bp | TTACAGCCTAGTGTGAGGCCAAGCTCCCGAGTTAGTGTGACTCAGTaGGAACCTGCACGGCAGAGGGGAGAGCCGGCTGCAAGGCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LQPSVRPSSRVSVTQ*EPARQRGEPAARPA Trigger: AGCTGGCCTTGCAGCCGGCTCTCCCCTCTGCCGTGCAGGTTCTCACTGAGTCACACTAACTCGGGAGCTTGGCCTCACACTAGGCTGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR TCA 90 bp | GCTGGCACGATGCTAAGGCTGTGTGTTCACTCTGGGAGGTGGCACTaGGGCCTGGGCTTGGACACGGTGAGCTTAGCAGCATCGCATGCT | + |
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Preference number: 1 (lower is better) Translates to: AGTMLRLCVHSGRWH*GLGLDTVSLAASHA Trigger: AGCATGCGATGCTGCTAAGCTCACCGTGTCCAAGCCCAGGCCTCAGTGCCACCTCCCAGAGTGAACACACAGCCTTAGCATCGTGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 90 bp | GCACTGAGGCCTGGGCTTGGACACGGTGAGCTTAGCAGCATCGCATaGTCTTTACAGCCTAGTGTGAGGCCAAGCTCCCGAGTTAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: ALRPGLGHGELSSIA*SLQPSVRPSSRVSV Trigger: CACACTAACTCGGGAGCTTGGCCTCACACTAGGCTGTAAAGAGCATGCGATGCTGCTAAGCTCACCGTGTCCAAGCCCAGGCCTCAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 90 bp | AGTCCAGCACTCTTGAGCCAGGTATTAGATGGTGTGGATTCGAGATaGCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACG | + |
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Preference number: 1 (lower is better) Translates to: SPALLSQVLDGVDSR*PLQVHAGGRHTRTT Trigger: CGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATCCACACCATCTAATACCTGGCTCAAGAGTGCTGGACT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| 3UTR CCA 90 bp | GCTACATGCCACCAACTGTCAAGTAAGGCAACCTACAAGGCCACTTaGTTATGTGTCTCTGCCATGGGCTGTGGAGGGACGGGTGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: ATCHQLSSKATYKAT*LCVSAMGCGGTGEG Trigger: TCCTTCACCCGTCCCTCCACAGCCCATGGCAGAGACACATAACCAAGTGGCCTTGTAGGTTGCCTTACTTGACAGTTGGTGGCATGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 90 bp | CACTGCAATAACGAGGGCTCTAAGAAGCGGTCCCACCCTGTCTCCTaGCCTAGCATCTACTCCACAAATCCTACATGTCTGGTGGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: HCNNEGSKKRSHPVS*PSIYSTNPTCLVAE Trigger: TTCAGCCACCAGACATGTAGGATTTGTGGAGTAGATGCTAGGCCAGGAGACAGGGTGGGACCGCTTCTTAGAGCCCTCGTTATTGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR TCA 90 bp | GGCCTAGCATCTACTCCACAAATCCTACATGTCTGGTGGCTGAAATaGGCCAAGACCAGGATGCAACAGGGATCAAGTGTCAGGAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: GLASTPQILHVWWLK*AKTRMQQGSSVRSS Trigger: ACTGCTCCTGACACTTGATCCCTGTTGCATCCTGGTCTTGGCTCATTTCAGCCACCAGACATGTAGGATTTGTGGAGTAGATGCTAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 90 bp | CGTTCTGCTCAGCTAGCTCAAGTTCACATCTTGCTACTCACATGCTaGCTTCTGGTTTTCAAAGTGACTGGTACAAACGGTCAGTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: RSAQLAQVHILLLTC*LLVFKVTGTNGQSV Trigger: GACAGACTGACCGTTTGTACCAGTCACTTTGAAAACCAGAAGGCAGCATGTGAGTAGCAAGATGTGAACTTGAGCTAGCTGAGCAGAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 90 bp | CTGCGTTCTGCTCAGCTAGCTCAAGTTCACATCTTGCTACTCACATaGTGCCTTCTGGTTTTCAAAGTGACTGGTACAAACGGTCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: LRSAQLAQVHILLLT*CLLVFKVTGTNGQS Trigger: AGACTGACCGTTTGTACCAGTCACTTTGAAAACCAGAAGGCAGCATGTGAGTAGCAAGATGTGAACTTGAGCTAGCTGAGCAGAACGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 90 bp | CTGTCATTAATGAGAGCACGCGTGTGTCTGCGTACACCTGAACCTTaGTTAACTGTGTCAACAAGGAAGAGTTTCTGTAGAGAGGCGAAA | + |
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Preference number: 1 (lower is better) Translates to: LSLMRARVCLRTPEP*LTVSTRKSFCREAK Trigger: TTTCGCCTCTCTACAGAAACTCTTCCTTGTTGACACAGTTAACCAAGGTTCAGGTGTACGCAGACACACGCGTGCTCTCATTAATGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CAA 90 bp | CTTCTCTACCGTGGGGAGTGTGGACACCTGACCCCGCCTGCGCCTTaGCGAGACTCGGAGGGTGCTGGCACGATGCTAAGGCTGTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LLYRGECGHLTPPAP*RDSEGAGTMLRLCV Trigger: AACACACAGCCTTAGCATCGTGCCAGCACCCTCCGAGTCTCGCAAAGGCGCAGGCGGGGTCAGGTGTCCACACTCCCCACGGTAGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CAA 90 bp | AGTCTGTCAGAGGGACAGCGCTCTCCTGGCAACCCCACACTCACCTaGGTCACAGTGGCCCCCAGCAGCGGCTGGGAACAGGTTGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SLSEGQRSPGNPTLT*VTVAPSSGWEQVVS Trigger: AGACACAACCTGTTCCCAGCCGCTGCTGGGGGCCACTGTGACCAAGGTGAGTGTGGGGTTGCCAGGAGAGCGCTGTCCCTCTGACAGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR TCA 90 bp | ATCCACAGGGCACCTGGTGAGGGAGCCCTGAAAGGTTGCTGGCCGCTGGTCCTAGCCTGCCAGCTACCCTaGGATCAGAGCGCACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: IHRAPGEGALKGCWPLVLACQLP*DQSALC Trigger: ACACAGTGCGCTCTGATCTCAGGGTAGCTGGCAGGC...TAGGACCAGCGGCCAGCAACCTTTCAGGGCTCCCTCACCAGGTGCCCTGTGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCCACATCCCCTCGGCTTGTGAAGACTTGGTGAGGCAGGCAGAACGGCTGGCTGTGTGTTCACTCTaGGAGGTGGCACTGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PGHIPSACEDLVRQAERLAVCSL*EVALRP Trigger: AGGCCTCAGTGCCACCTCCCAGAGTGAACACACAGC...CAGCCGTTCTGCCTGCCTCACCAAGTCTTCACAAGCCGAGGGGATGTGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGATGTCCCGGCCTTCTGCACCCTCATGGACCAGGGCTAGCAGGGTGCCGACGGTGAGTGTCTCCTaGGCACTAAAGCAGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VLMSRPSAPSWTRASRVPTVSVS*ALKQVP Trigger: AGGAACCTGCTTTAGTGCCCAGGAGACACTCACCGT...CGGCACCCTGCTAGCCCTGGTCCATGAGGGTGCAGAAGGCCGGGACATCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCCACATCCCCTCGGCTTGTGAAGACTTGGTGAGGCAGGCAGAACGGCTGTACATGTCTGGTGGCTaGAATGAGCCAAGACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PGHIPSACEDLVRQAERLYMSGG*NEPRPG Trigger: TCCTGGTCTTGGCTCATTTCAGCCACCAGACATGTA...CAGCCGTTCTGCCTGCCTCACCAAGTCTTCACAAGCCGAGGGGATGTGGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGAGGCAGGCAGAACGGCTGCTCTCTCTCCACAGGAAAGAGCCAGAAGCCTCCCACCCTGTCTCCTaGCCTAGCATCTACTCCACA | + |
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Preference number: 2 (lower is better) Translates to: LVRQAERLLSLHRKEPEASHPVS*PSIYST Trigger: TGTGGAGTAGATGCTAGGCCAGGAGACAGGGTGGGA...GGCTTCTGGCTCTTTCCTGTGGAGAGAGAGCAGCCGTTCTGCCTGCCTCACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGGTGGCTGAAATGAGCCAAGACCAGGATGCAACAGGGATCAAGTGTCAGCTGAAGGCTGCTGGCTaGGGCCCACCAAGCAGTCGA | + |
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Preference number: 2 (lower is better) Translates to: CLVAEMSQDQDATGIKCQLKAAG*GPPSSR Trigger: TCGACTGCTTGGTGGGCCCCAGCCAGCAGCCTTCAG...CTGACACTTGATCCCTGTTGCATCCTGGTCTTGGCTCATTTCAGCCACCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTTGTGAGCCACACCCCAGCTCCCAGAAAGTCACTAATGTACAGAGGGGCGTTAGTGTGACTCAGTaGGAACCTGCACGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GSCEPHPSSQKVTNVQRGVSVTQ*EPARQR Trigger: CCTCTGCCGTGCAGGTTCTCACTGAGTCACACTAAC...GCCCCTCTGTACATTAGTGACTTTCTGGGAGCTGGGGTGTGGCTCACAACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR GCA 90 bp | TCGGCTTGTGAAGACTTGGTGAGGCAGGCAGAACGGCTGCTCTCTCTCCACAGGAAGATGCTCTTGAGCTaGAGAGCATCTCTGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SACEDLVRQAERLLSLHRKMLLS*RASLVH Trigger: GTGGACCAGAGATGCTCTGCAGCTCAAGAGCATCTT...CCTGTGGAGAGAGAGCAGCCGTTCTGCCTGCCTCACCAAGTCTTCACAAGCCGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTTGTGAGCCACACCCCAGCTCCCAGAAAGTCACTAATGTACAGAGGGGCGGCTGCAAGGCCAGCTaGGGTTGGGTTTCTGTCATT | + |
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Preference number: 2 (lower is better) Translates to: GSCEPHPSSQKVTNVQRGGCKAS*GWVSVI Trigger: AATGACAGAAACCCAACCCCAGCTGGCCTTGCAGCC...GCCCCTCTGTACATTAGTGACTTTCTGGGAGCTGGGGTGTGGCTCACAACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR TCA 90 bp | CTATTTCCCAGTCAGAGCACTGCAATAACGAGGGCTCTAAGAAGCGGTCCCACCGTCTGGTGGCTGAAATaGGCCAAGACCAGGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: LFPSQSTAITRALRSGPTVWWLK*AKTRMQ Trigger: TTGCATCCTGGTCTTGGCTCATTTCAGCCACCAGAC...GGTGGGACCGCTTCTTAGAGCCCTCGTTATTGCAGTGCTCTGACTGGGAAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCACCAAGCAGTCGAGGCAAGAAGATGCTCTTGAGCTGCAGAGCATCTCTAAGGCCAGCTGGGGTTaGGTTTCTGTCATTAATGAG | + |
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Preference number: 2 (lower is better) Translates to: GPTKQSRQEDALELQSISKASWG*VSVINE Trigger: CTCATTAATGACAGAAACCCAACCCCAGCTGGCCTT...AGAGATGCTCTGCAGCTCAAGAGCATCTTCTTGCCTCGACTGCTTGGTGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CAA 90 bp | CCAAGACCAGGATGCAACAGGGATCAAGTGTCAGGAGCAGTTTGGTaGCAGACAGGGCCCTTAGAGGTGTTAGTGAGCCAAAGAACACTC | + |
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Preference number: 2 (lower is better) Translates to: PRPGCNRDQVSGAVW*QTGPLEVLVSQRTL Trigger: GAGTGTTCTTTGGCTCACTAACACCTCTAAGGGCCCTGTCTGCAACCAAACTGCTCCTGACACTTGATCCCTGTTGCATCCTGGTCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CAA 90 bp | ATCTACGTGGAGAAACTTGTAAATGACTCCAGCCTGGTCTTCCGATaGCACCACTTCACAGACCACAGAGGAGGGGTGTCCCAGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: IYVEKLVNDSSLVFR*HHFTDHRGGVSQQK Trigger: TTTCTGCTGGGACACCCCTCCTCTGTGGTCTGTGAAGTGGTGCAATCGGAAGACCAGGCTGGAGTCATTTACAAGTTTCTCCACGTAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CAA 90 bp | CTGCCCATCCACCTGCGTTCTGCTCAGCTAGCTCAAGTTCACATCTaGCTACTCACATGCTGCCTTCTGGTTTTCAAAGTGACTGGTACA | + |
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Preference number: 2 (lower is better) Translates to: LPIHLRSAQLAQVHI*LLTCCLLVFKVTGT Trigger: TGTACCAGTCACTTTGAAAACCAGAAGGCAGCATGTGAGTAGCAAGATGTGAACTTGAGCTAGCTGAGCAGAACGCAGGTGGATGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAACACCTCCTGCTTCTCCATCACTGCAACAGAAAGGACAATAGTCAAGGGTGGTTTTCAAAGTGACTaGTACAAACGGTCAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: TNTSCFSITATERTIVKGGFQSD*YKRSVC Trigger: ACAGACTGACCGTTTGTACCAGTCACTTTGAAAACC...ACCCTTGACTATTGTCCTTTCTGTTGCAGTGATGGAGAAGCAGGAGGTGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 72 bp | AGGGACAGCGCTCTCCTGGCAACCCCACACTCACCTTaGTCACAGTGGCCCCCAGCAGCGGCTGGGAACAGG | + |
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Preference number: 3 (lower is better) Translates to: RDSALLATPHSP*SQWPPAAAGNR Trigger: CCTGTTCCCAGCCGCTGCTGGGGGCCACTGTGACCAAGGTGAGTGTGGGGTTGCCAGGAGAGCGCTGTCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 72 bp | TCTCTACCGTGGGGAGTGTGGACACCTGACCCCGCCTaGGCCTTTGCGAGACTCGGAGGGTGCTGGCACGAT | + |
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Preference number: 3 (lower is better) Translates to: SLPWGVWTPDPA*AFARLGGCWHD Trigger: ATCGTGCCAGCACCCTCCGAGTCTCGCAAAGGCGCAGGCGGGGTCAGGTGTCCACACTCCCCACGGTAGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 72 bp | TGGACCAGGGCTAGCAGGGTGCCGGCTGGCTTTGCGTaGACAGCGACTATGTGGCCTGCCAGCTACCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: WTRASRVPAGFA*TATMWPASYPE Trigger: CTCAGGGTAGCTGGCAGGCCACATAGTCGCTGTGCACGCAAAGCCAGCCGGCACCCTGCTAGCCCTGGTCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 72 bp | CAGGTTGTGCTGATGTCCCGGCCTTCTGCACCCTCATaGACCAGGGCTAGCAGGGTGCCGGCTGGCTTTGCG | + |
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Preference number: 3 (lower is better) Translates to: QVVLMSRPSAPS*TRASRVPAGFA Trigger: CGCAAAGCCAGCCGGCACCCTGCTAGCCCTGGTCCATGAGGGTGCAGAAGGCCGGGACATCAGCACAACCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR TCA 72 bp | GGGGTCTCAGCACTGACAGATCCACAGGGCACCTGGTaGGGGAGCCCTGAAAGGTTGCTGGCCGCTGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: GVSALTDPQGTW*GSPERLLAAGP Trigger: AGGACCAGCGGCCAGCAACCTTTCAGGGCTCCCTCACCAGGTGCCCTGTGGATCTGTCAGTGCTGAGACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 72 bp | CCTGACCCCGCCTGCGCCTTTGCGAGACTCGGAGGGTaGTGGCACGATGCTAAGGCTGTGTGTTCACTCTGG | + |
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Preference number: 3 (lower is better) Translates to: PDPACAFARLGG*WHDAKAVCSLW Trigger: CCAGAGTGAACACACAGCCTTAGCATCGTGCCAGCACCCTCCGAGTCTCGCAAAGGCGCAGGCGGGGTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 72 bp | ATCCACAGGGCACCTGGTGAGGGAGCCCTGAAAGGTTaGTGGCCGCTGGTCCTAACCTGGCCACATCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: IHRAPGEGALKG*WPLVLTWPHPL Trigger: GAGGGGATGTGGCCAGGTTAGGACCAGCGGCCAGCAACCTTTCAGGGCTCCCTCACCAGGTGCCCTGTGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 72 bp | GCTCTCCTGGCAACCCCACACTCACCTTGGTCACAGTaGCCCCCAGCAGCGGCTGGGAACAGGTTGTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: ALLATPHSPWSQ*PPAAAGNRLCL Trigger: CAGACACAACCTGTTCCCAGCCGCTGCTGGGGGCCACTGTGACCAAGGTGAGTGTGGGGTTGCCAGGAGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR TCA 72 bp | CCGCTGGTCCTAACCTGGCCACATCCCCTCGGCTTGTaGAGACTTGGTGAGGCAGGCAGAACGGCTGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: PLVLTWPHPLGL*RLGEAGRTAAL Trigger: GAGAGCAGCCGTTCTGCCTGCCTCACCAAGTCTTCACAAGCCGAGGGGATGTGGCCAGGTTAGGACCAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR GCA 72 bp | AGATGGTGTGGATTCGAGATGCCCACTGCAGGTCCATaGAGGCGGCAGACACACCAGAACCACGTGGGCGGC | + |
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Preference number: 3 (lower is better) Translates to: RWCGFEMPTAGP*RRQTHQNHVGG Trigger: GCCGCCCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATCCACACCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| 3UTR CCA 72 bp | AGGGTGCCGGCTGGCTTTGCGTGCACAGCGACTATGTaGCCTGCCAGCTACCCTGAGATCAGAGCGCACTGT | + |
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Preference number: 3 (lower is better) Translates to: RVPAGFACTATM*PASYPEIRAHC Trigger: ACAGTGCGCTCTGATCTCAGGGTAGCTGGCAGGCCACATAGTCGCTGTGCACGCAAAGCCAGCCGGCACCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 72 bp | GCCCCCAGCAGCGGCTGGGAACAGGTTGTGTCTGTTTaGGGTCTCAGCACTGACAGATCCACAGGGCACCTG | + |
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Preference number: 3 (lower is better) Translates to: APSSGWEQVVSV*GLSTDRSTGHL Trigger: CAGGTGCCCTGTGGATCTGTCAGTGCTGAGACCCCAAACAGACACAACCTGTTCCCAGCCGCTGCTGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR TCA 72 bp | AGTGTGAGGCCAAGCTCCCGAGTTAGTGTGACTCAGTaGGAACCTGCACGGCAGAGGGGAGAGCCGGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SVRPSSRVSVTQ*EPARQRGEPAA Trigger: TGCAGCCGGCTCTCCCCTCTGCCGTGCAGGTTCTCACTGAGTCACACTAACTCGGGAGCTTGGCCTCACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| 3UTR CCA 72 bp | GTCTCCTGGGCACTAAAGCAGGTTCCTTCTCTACCGTaGGGAGTGTGGACACCTGACCCCGCCTGCGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSWALKQVPSLP*GVWTPDPACAF Trigger: AAAGGCGCAGGCGGGGTCAGGTGTCCACACTCCCCACGGTAGAGAAGGAACCTGCTTTAGTGCCCAGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR CCA 72 bp | ACGGGGCCACCTTTGCACACTGTGGCCCGATGGGCATaGAGACACGGTGAGTGTCTCCTGGGCACTAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TGPPLHTVARWA*RHGECLLGTKA Trigger: TGCTTTAGTGCCCAGGAGACACTCACCGTGTCTCCATGCCCATCGGGCCACAGTGTGCAAAGGTGGCCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR TCA 72 bp | GGGGCCCACCAAGCAGTCGAGGCAAGAAGATGCTCTTaGGCTGCAGAGCATCTCTGGTCCACCTTCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GAHQAVEARRCS*AAEHLWSTFRA Trigger: GGCTCTGAAGGTGGACCAGAGATGCTCTGCAGCTCAAGAGCATCTTCTTGCCTCGACTGCTTGGTGGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR TCA 72 bp | CTGGGAACAGGTTGTGTCTGTTTGGGGTCTCAGCACTaGCAGATCCACAGGGCACCTGGTGAGGGAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGTGCVCLGSQH*QIHRAPGEGAL Trigger: CAGGGCTCCCTCACCAGGTGCCCTGTGGATCTGTCAGTGCTGAGACCCCAAACAGACACAACCTGTTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR CCA 72 bp | GCAGAGGGGAGAGCCGGCTGCAAGGCCAGCTGGGGTTaGGTTTCTGTCATTAATGAGAGCACGCGTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AEGRAGCKASWG*VSVINESTRVS Trigger: AGACACACGCGTGCTCTCATTAATGACAGAAACCCAACCCCAGCTGGCCTTGCAGCCGGCTCTCCCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR CCA 72 bp | TGGCCCGATGGGCATGGAGACACGGTGAGTGTCTCCTaGGCACTAAAGCAGGTTCCTTCTCTACCGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPDGHGDTVSVS*ALKQVPSLPWG Trigger: TCCCCACGGTAGAGAAGGAACCTGCTTTAGTGCCCAGGAGACACTCACCGTGTCTCCATGCCCATCGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR CCA 72 bp | ACACTCACCTTGGTCACAGTGGCCCCCAGCAGCGGCTaGGAACAGGTTGTGTCTGTTTGGGGTCTCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: TLTLVTVAPSSG*EQVVSVWGLST Trigger: AGTGCTGAGACCCCAAACAGACACAACCTGTTCCCAGCCGCTGCTGGGGGCCACTGTGACCAAGGTGAGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCCACAGGGCACCTGGTGAGGGAGCCCTGAAAGGTTGCTGGCCGCTGGTCCTAGGCAAGAAGATGCTCTaGAGCTGCAGAGCATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IHRAPGEGALKGCWPLVLGKKML*SCRASL Trigger: CAGAGATGCTCTGCAGCTCAAGAGCATCTTCTTGCC...TAGGACCAGCGGCCAGCAACCTTTCAGGGCTCCCTCACCAGGTGCCCTGTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR TCA 72 bp | ATGCTAAGGCTGTGTGTTCACTCTGGGAGGTGGCACTaGGGCCTGGGCTTGGACACGGTGAGCTTAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MLRLCVHSGRWH*GLGLDTVSLAA Trigger: TGCTGCTAAGCTCACCGTGTCCAAGCCCAGGCCTCAGTGCCACCTCCCAGAGTGAACACACAGCCTTAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR TCA 72 bp | TGCGTGCACAGCGACTATGTGGCCTGCCAGCTACCCTaGGATCAGAGCGCACTGTGTGAAGGCAATGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CVHSDYVACQLP*DQSALCEGNGE Trigger: CTCACCATTGCCTTCACACAGTGCGCTCTGATCTCAGGGTAGCTGGCAGGCCACATAGTCGCTGTGCACGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR GCA 72 bp | TCAGTGAGAACCTGCACGGCAGAGGGGAGAGCCGGCTaGAAGGCCAGCTGGGGTTGGGTTTCTGTCATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SVRTCTAEGRAG*KASWGWVSVIN Trigger: ATTAATGACAGAAACCCAACCCCAGCTGGCCTTGCAGCCGGCTCTCCCCTCTGCCGTGCAGGTTCTCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR GCA 72 bp | CCTGGGCTTGGACACGGTGAGCTTAGCAGCATCGCATaGTCTTTACAGCCTAGTGTGAGGCCAAGCTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: PGLGHGELSSIA*SLQPSVRPSSR Trigger: TCGGGAGCTTGGCCTCACACTAGGCTGTAAAGAGCATGCGATGCTGCTAAGCTCACCGTGTCCAAGCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTCACAGTGGCCCCCAGCAGCGGCTGGGAACAGGTTGTGTCTGTTTGGGGTGGTAGTCCAGCACTCTaGAGCCAGGTATTAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LVTVAPSSGWEQVVSVWGGSPAL*SQVLDG Trigger: ACCATCTAATACCTGGCTCAAGAGTGCTGGACTACC...ACCCCAAACAGACACAACCTGTTCCCAGCCGCTGCTGGGGGCCACTGTGACCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR GCA 72 bp | CTCTTGAGCCAGGTATTAGATGGTGTGGATTCGAGATaGCCACTGCAGGTCCATGCAGGCGGCAGACACACC | + |
|
Preference number: 3 (lower is better) Translates to: LLSQVLDGVDSR*PLQVHAGGRHT Trigger: GGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATCCACACCATCTAATACCTGGCTCAAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| 3UTR GCA 72 bp | CCACCAAGCAGTCGAGGCAAGAAGATGCTCTTGAGCTaGAGAGCATCTCTGGTCCACCTTCAGAGCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PPSSRGKKMLLS*RASLVHLQSPA Trigger: TGCTGGGCTCTGAAGGTGGACCAGAGATGCTCTGCAGCTCAAGAGCATCTTCTTGCCTCGACTGCTTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR GCA 72 bp | AGCGAGAGGCTGACGGCTATTTCCCAGTCAGAGCACTaGAATAACGAGGGCTCTAAGAAGCGGTCCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: SERLTAISQSEH*NNEGSKKRSHP Trigger: AGGGTGGGACCGCTTCTTAGAGCCCTCGTTATTGCAGTGCTCTGACTGGGAAATAGCCGTCAGCCTCTCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR TCA 72 bp | AGAGCCAGAAGCCCAGCAAGCACTGATACACACCACTaGGCACAGAGAGCAAGAACAAGTGAGCGAGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RARSPASTDTHH*AQRARTSEREA Trigger: AGCCTCTCGCTCACTTGTTCTTGCTCTCTGTGCTCAGTGGTGTGTATCAGTGCTTGCTGGGCTTCTGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR CCA 72 bp | CACCAACTGTCAAGTAAGGCAACCTACAAGGCCACTTaGTTATGTGTCTCTGCCATGGGCTGTGGAGGGACG | + |
|
Preference number: 3 (lower is better) Translates to: HQLSSKATYKAT*LCVSAMGCGGT Trigger: CGTCCCTCCACAGCCCATGGCAGAGACACATAACCAAGTGGCCTTGTAGGTTGCCTTACTTGACAGTTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGTTGTGAGCCACACCCCAGCTCCCAGAAAGTCACTAATGTACAGAGGGGCAACCTACAAGGCCACTaGGTTATGTGTCTCTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GSCEPHPSSQKVTNVQRGNLQGH*VMCLCH Trigger: ATGGCAGAGACACATAACCAAGTGGCCTTGTAGGTT...GCCCCTCTGTACATTAGTGACTTTCTGGGAGCTGGGGTGTGGCTCACAACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR CCA 72 bp | GCTACTCACATGCTGCCTTCTGGTTTTCAAAGTGACTaGTACAAACGGTCAGTCTGTCAGAGGGACAGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: ATHMLPSGFQSD*YKRSVCQRDSA Trigger: AGCGCTGTCCCTCTGACAGACTGACCGTTTGTACCAGTCACTTTGAAAACCAGAAGGCAGCATGTGAGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR TCA 72 bp | TCTACTCCACAAATCCTACATGTCTGGTGGCTGAAATaGGCCAAGACCAGGATGCAACAGGGATCAAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: STPQILHVWWLK*AKTRMQQGSSV Trigger: GACACTTGATCCCTGTTGCATCCTGGTCTTGGCTCATTTCAGCCACCAGACATGTAGGATTTGTGGAGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR TCA 72 bp | TCTTGCTACTCACATGCTGCCTTCTGGTTTTCAAAGTaGCTGGTACAAACGGTCAGTCTGTCAGAGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SCYSHAAFWFSK*LVQTVSLSEGQ Trigger: CTGTCCCTCTGACAGACTGACCGTTTGTACCAGTCACTTTGAAAACCAGAAGGCAGCATGTGAGTAGCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR TCA 72 bp | GTCATTAATGAGAGCACGCGTGTGTCTGCGTACACCTaGACCTTGGTTAACTGTGTCAACAAGGAAGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VINESTRVSAYT*TLVNCVNKEEF Trigger: AAACTCTTCCTTGTTGACACAGTTAACCAAGGTTCAGGTGTACGCAGACACACGCGTGCTCTCATTAATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR GCA 90 bp | CACACCAGAACCACGTGGGCGGCCACAGCCCCAGAGGCCGAGAGGACAGCAGAGCGTCGATGTCGCGGCTaGGCCGTCGGGCCTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTRTTWAATAPEAERTAERRCRG*AVGPRA Trigger: AGCGCGAGGCCCGACGGCGCAGCCGCGACATCGACG...CTCTGCTGTCCTCTCGGCCTCTGGGGCTGTGGCCGCCCACGTGGTTCTGGTGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCGCGTCCTCTTGCCCGGAGCTCGCTGGTGTGGCTGGTAGTCCAGCACTCTCCACTTCTGGCGCTGTaGCCTCTGGCCGCCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LPRPLARSSLVWLVVQHSPLLAL*PLAAHI Trigger: GATGTGGGCGGCCAGAGGTCACAGCGCCAGAAGTGG...AGAGTGCTGGACTACCAGCCACACCAGCGAGCTCCGGGCAAGAGGACGCGGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | CCCGCGTCCTCTTGCCCGGAGCTCGCTGGTGTGGCTGGTAGTCCAGCACTCTTGTCCAGCAGCGCCTTCTaGTCGAACTCCCGGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PASSCPELAGVAGSPALLSSSAF*SNSRPW Trigger: CCACGGCCGGGAGTTCGACCAGAAGGCGCTGCTGGA...CAAGAGTGCTGGACTACCAGCCACACCAGCGAGCTCCGGGCAAGAGGACGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| 3UTR CAA 72 bp | CGTGGGGAGTGTGGACACCTGACCCCGCCTGCGCCTTaGCGAGACTCGGAGGGTGCTGGCACGATGCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGECGHLTPPAP*RDSEGAGTMLR Trigger: CCTTAGCATCGTGCCAGCACCCTCCGAGTCTCGCAAAGGCGCAGGCGGGGTCAGGTGTCCACACTCCCCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR CAA 72 bp | GAGGGACAGCGCTCTCCTGGCAACCCCACACTCACCTaGGTCACAGTGGCCCCCAGCAGCGGCTGGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: EGQRSPGNPTLT*VTVAPSSGWEQ Trigger: CTGTTCCCAGCCGCTGCTGGGGGCCACTGTGACCAAGGTGAGTGTGGGGTTGCCAGGAGAGCGCTGTCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CCA 90 bp | GACACTCCCGCGTCCTCTTGCCCGGAGCTCGCTGGTGTGGCTGGTAGTCCAGCAGCGGTGGTGAAGTGGTaGAACAGGGGCTTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DTPASSCPELAGVAGSPAAVVKW*NRGLLR Trigger: CCGCAGCAAGCCCCTGTTCCACCACTTCACCACCGC...TGCTGGACTACCAGCCACACCAGCGAGCTCCGGGCAAGAGGACGCGGGAGTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| 3UTR CAA 72 bp | CCTCATGGACCAGGGCTAGCAGGGTGCCGGCTGGCTTaGCGTGCACAGCGACTATGTGGCCTGCCAGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: PHGPGLAGCRLA*RAQRLCGLPAT Trigger: GGTAGCTGGCAGGCCACATAGTCGCTGTGCACGCAAAGCCAGCCGGCACCCTGCTAGCCCTGGTCCATGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR TCA 90 bp | ATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTCCAGCAGCAGGATCTTaGCCAGCCGCCGCACCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IRDAHCRSMQAADTPEPRPAAGS*PAAAPR Trigger: GCGCGGTGCGGCGGCTGGTCAAGATCCTGCTGCTGG...ACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR TCA 90 bp | CTACCGTGGGGAGTGTGGACACCTGACCCCGCCTGCGCCTTTGCGAGACTCGGATGCGCCTGTCCTCCATaGGGACCTGGTCATACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPWGVWTPDPACAFARLGCACPP*GPGHTR Trigger: GCGAGTATGACCAGGTCCTCATGGAGGACAGGCGCA...TCCGAGTCTCGCAAAGGCGCAGGCGGGGTCAGGTGTCCACACTCCCCACGGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CCA 90 bp | GCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGGGCGGCCAATGGCGGTGGTGAAGTaGTGGAACAGGGGCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHCRSMQAADTPEPRGRPMAVVK*WNRGLL Trigger: CAGCAAGCCCCTGTTCCACCACTTCACCACCGCCAT...TGGCCGCCCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTCACAGTGGCCCCCAGCAGCGGCTGGGAACAGGTTGTGTCTGTTTGGGGTCCACTTCTGGCGCTGTaGCCTCTGGCCGCCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LVTVAPSSGWEQVVSVWGPLLAL*PLAAHI Trigger: GATGTGGGCGGCCAGAGGTCACAGCGCCAGAAGTGG...ACCCCAAACAGACACAACCTGTTCCCAGCCGCTGCTGGGGGCCACTGTGACCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCGCGTCCTCTTGCCCGGAGCTCGCTGGTGTGGCTGGTAGTCCAGCACTCTAGTGCTGCCAGGGAATaGCGAGCTTGTCTCGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRPLARSSLVWLVVQHSSAARE*RACLER Trigger: ACGCTCGAGACAAGCTCGGCATTCCCTGGCAGCACT...AGAGTGCTGGACTACCAGCCACACCAGCGAGCTCCGGGCAAGAGGACGCGGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGCGTCCTCTTGCCCGGAGCTCGCTGGTGTGGCTGGTAGTCCAGCACTCTCTCCACAGGCAGCCCTaGCTTGTTCTCGAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPRPLARSSLVWLVVQHSLHRQP*LVLEGH Trigger: ATGGCCTTCGAGAACAAGGCAGGGCTGCCTGTGGAG...AGAGTGCTGGACTACCAGCCACACCAGCGAGCTCCGGGCAAGAGGACGCGGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | GATGGTGTGGATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCTCCAGCAGCGCCTTCTaGTCGAACTCCCGGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DGVDSRCPLQVHAGGRHTSSSAF*SNSRPW Trigger: CCACGGCCGGGAGTTCGACCAGAAGGCGCTGCTGGA...GGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATCCACACCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | CCCGGCCTTCTGCACCCTCATGGACCAGGGCTAGCAGGGTGCCGGCTGGCTTTGACTGATTCACCCAGCTaGAACTCGCTTCTGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLLHPHGPGLAGCRLALTDSPS*NSLLRL Trigger: CAGCCGCAGAAGCGAGTTCCAGCTGGGTGAATCAGT...CAAAGCCAGCCGGCACCCTGCTAGCCCTGGTCCATGAGGGTGCAGAAGGCCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CCA 90 bp | GATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGGCGGTGGTGAAGTGGTaGAACAGGGGCTTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSRCPLQVHAGGRHTRTTAVVKW*NRGLLR Trigger: CCGCAGCAAGCCCCTGTTCCACCACTTCACCACCGC...CGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGGGCTCCTCCATGAGGACCTaGTCATACTCGCTCGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EMPTAGPCRRQTHQNHVGSSMRT*SYSLED Trigger: GTCCTCGAGCGAGTATGACCAGGTCCTCATGGAGGA...GCCCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCGCGTCCTCTTGCCCGGAGCTCGCTGGTGTGGCTGGTAGTCCAGCACTCTTCTCGAAGATGTTCATaGACTCCACCAGCCGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRPLARSSLVWLVVQHSSRRCS*TPPAGW Trigger: CCAACCGGCTGGTGGAGTCCATGAACATCTTCGAGA...AGAGTGCTGGACTACCAGCCACACCAGCGAGCTCCGGGCAAGAGGACGCGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | ATCCACAGGGCACCTGGTGAGGGAGCCCTGAAAGGTTGCTGGCCGCTGGTCCTAATGGCGGTGGTGAAGTaGTGGAACAGGGGCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IHRAPGEGALKGCWPLVLMAVVK*WNRGLL Trigger: CAGCAAGCCCCTGTTCCACCACTTCACCACCGCCAT...TAGGACCAGCGGCCAGCAACCTTTCAGGGCTCCCTCACCAGGTGCCCTGTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CCA 90 bp | TCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGGTCCTCCATGAGGACCTaGTCATACTCGCTCGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRCPLQVHAGGRHTRTTWSSMRT*SYSLED Trigger: GTCCTCGAGCGAGTATGACCAGGTCCTCATGGAGGA...CCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | CGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGGGTCTCGAAGATGTTCATaGACTCCACCAGCCGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDAHCRSMQAADTPEPRGSRRCS*TPPAGW Trigger: CCAACCGGCTGGTGGAGTCCATGAACATCTTCGAGA...CCCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTGTCAACAAGGAAGAGTTTCTGTAGAGAGGCGAAAGCTGTGTCCCCAGGTCCAGCAGCAGGATCTTaGCCAGCCGCCGCACCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TVSTRKSFCREAKAVSPGPAAGS*PAAAPR Trigger: GCGCGGTGCGGCGGCTGGTCAAGATCCTGCTGCTGG...ACCTGGGGACACAGCTTTCGCCTCTCTACAGAAACTCTTCCTTGTTGACACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR TCA 90 bp | CACACCAGAACCACGTGGGCGGCCACAGCCCCAGAGGCCGAGAGGACAGCAGAGAGAAGAGCTTGTTGTTaGCGATGGTCTCGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HTRTTWAATAPEAERTAERRACC*RWSRRC Trigger: ACATCTTCGAGACCATCGTCAACAACAAGCTCTTCT...CTCTGCTGTCCTCTCGGCCTCTGGGGCTGTGGCCGCCCACGTGGTTCTGGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR TCA 90 bp | ATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGGTGCGGGTCGCCCTTaGAATCTGGGAAGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRDAHCRSMQAADTPEPRGAGRP*NLGSAS Trigger: AGAAGCACTTCCCAGATTTCAAGGGCGACCCGCACC...ACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGGCGGCCACAGCCCCAGAGGCCGAGAGGACAGCAGAGGGAGGGGCTGTCTTTGAAATCTGGGAAGTaGTTCTTAATGCTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RGRPQPQRPRGQQREGLSLKSGK*FLMLTD Trigger: GTCTGTGAGCATTAAGAAGCACTTCCCAGATTTCAA...AGACAGCCCCTCCCTCTGCTGTCCTCTCGGCCTCTGGGGCTGTGGCCGCCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR GCA 90 bp | ATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGCTTGCTGCGGTTCCTaGGCTTCCTGTCGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: IRDAHCRSMQAADTPEPRACCGS*ASCRST Trigger: AGTGCTTCGACAGGAAGCGCAGGAACCGCAGCAAGC...ACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGGGCGGATGTCTTGCTTACTaGGGAAGTAGTTCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EMPTAGPCRRQTHQNHVGGCLAY*GSSSAG Trigger: GCCAGCTGAACTACTTCCCCAGTAAGCAAGACATCC...GCCCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CCA 90 bp | AGCCAAAGAACACTCGGGGGAAGTTGTGAGCCACACCCCAGCTCCCAGAAAGTCCACTGGAACCACTTCTaGCGCTGTGACCTCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQRTLGGSCEPHPSSQKVHWNHF*RCDLWP Trigger: CGGCCAGAGGTCACAGCGCCAGAAGTGGTTCCAGTG...GACTTTCTGGGAGCTGGGGTGTGGCTCACAACTTCCCCCGAGTGTTCTTTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR GCA 90 bp | AGCCAAAGAACACTCGGGGGAAGTTGTGAGCCACACCCCAGCTCCCAGAAAGTCGCTTGCTGCGGTTCCTaGGCTTCCTGTCGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SQRTLGGSCEPHPSSQKVACCGS*ASCRST Trigger: AGTGCTTCGACAGGAAGCGCAGGAACCGCAGCAAGC...GACTTTCTGGGAGCTGGGGTGTGGCTCACAACTTCCCCCGAGTGTTCTTTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR GCA 90 bp | CGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGGGTCTTTCAGGTTCTCCTaGAGGATCGTGTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RDAHCRSMQAADTPEPRGSFRFS*RIVSFT Trigger: TGTGAAGGACACGATCCTGCAGGAGAACCTGAAAGA...CCCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | GATGGTGTGGATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCGGATGTTGTCGAAGATaGTGTCGCGGAACTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGVDSRCPLQVHAGGRHTGCCRR*CRGTPA Trigger: TGCTGGAGTTCCGCGACACCATCTTCGACAACATCC...GGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATCCACACCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGGATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAAATGCCGTCGAAGCACTaGAACCACTTCTGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VWIRDAHCRSMQAADTPEMPSKH*NHFWRC Trigger: ACAGCGCCAGAAGTGGTTCCAGTGCTTCGACGGCAT...TTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATCCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| 3UTR CAA 72 bp | TGGGGCCCACCAAGCAGTCGAGGCAAGAAGATGCTCTaGAGCTGCAGAGCATCTCTGGTCCACCTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WGPPSSRGKKML*SCRASLVHLQS Trigger: GCTCTGAAGGTGGACCAGAGATGCTCTGCAGCTCAAGAGCATCTTCTTGCCTCGACTGCTTGGTGGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGTTGTGAGCCACACCCCAGCTCCCAGAAAGTCACTAATGTACAGAGGGGCAGTGCTGCCAGGGAATaGCGAGCTTGTCTCGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSCEPHPSSQKVTNVQRGSAARE*RACLER Trigger: ACGCTCGAGACAAGCTCGGCATTCCCTGGCAGCACT...GCCCCTCTGTACATTAGTGACTTTCTGGGAGCTGGGGTGTGGCTCACAACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCTGGTCTTCCGATTGCACCACTTCACAGACCACAGAGGAGGGGTGTCCGGATGTTGTCGAAGATaGTGTCGCGGAACTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVFRLHHFTDHRGGVSGCCRR*CRGTPA Trigger: TGCTGGAGTTCCGCGACACCATCTTCGACAACATCC...GGACACCCCTCCTCTGTGGTCTGTGAAGTGGTGCAATCGGAAGACCAGGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CCA 90 bp | GAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGGGCGTCGCCCTTGAAATCTaGGAAGTGCTTCTTAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: EMPTAGPCRRQTHQNHVGVALEI*EVLLNA Trigger: AGCATTAAGAAGCACTTCCCAGATTTCAAGGGCGAC...GCCCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR TCA 90 bp | CTATTTCCCAGTCAGAGCACTGCAATAACGAGGGCTCTAAGAAGCGGTCCCACCGGTGCGGGTCGCCCTTaGAATCTGGGAAGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFPSQSTAITRALRSGPTGAGRP*NLGSAS Trigger: AGAAGCACTTCCCAGATTTCAAGGGCGACCCGCACC...GGTGGGACCGCTTCTTAGAGCCCTCGTTATTGCAGTGCTCTGACTGGGAAATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGCACTCTTGAGCCAGGTATTAGATGGTGTGGATTCGAGATGCCCACTGCAACGTCCTCCAGCCGGTaGGGGTCGCCCTTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTLEPGIRWCGFEMPTATSSSR*GSPLKS Trigger: AGATTTCAAGGGCGACCCGCACCGGCTGGAGGACGT...TGCAGTGGGCATCTCGAATCCACACCATCTAATACCTGGCTCAAGAGTGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGAGAGGCGAAAGCTGTGTCCCCAGGTTTTACAGATCAACAGCAGAGTGATACGTCCTCCAGCCGGTaGGGGTCGCCCTTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CREAKAVSPGFTDQQQSDTSSSR*GSPLKS Trigger: AGATTTCAAGGGCGACCCGCACCGGCTGGAGGACGT...ATCACTCTGCTGTTGATCTGTAAAACCTGGGGACACAGCTTTCGCCTCTCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTTCTGTAGAGAGGCGAAAGCTGTGTCCCCAGGTTTTACAGATCAACAGCGAGGGCACTCAGGGCTaGCACGTAGAGCTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVSVERRKLCPQVLQINSEGTQG*HVELEG Trigger: ACCTTCCAGCTCTACGTGCCAGCCCTGAGTGCCCTC...GCTGTTGATCTGTAAAACCTGGGGACACAGCTTTCGCCTCTCTACAGAAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | CAACAAGGAAGAGTTTCTGTAGAGAGGCGAAAGCTGTGTCCCCAGGTTTTACAGCACTGGAACCACTTCTaGCGCTGTGACCTCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QQGRVSVERRKLCPQVLQHWNHF*RCDLWP Trigger: CGGCCAGAGGTCACAGCGCCAGAAGTGGTTCCAGTG...CTGTAAAACCTGGGGACACAGCTTTCGCCTCTCTACAGAAACTCTTCCTTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTATTAGATGGTGTGGATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCGGATGTCTTGCTTACTaGGGAAGTAGTTCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVLDGVDSRCPLQVHAGGGCLAY*GSSSAG Trigger: TCCAGCTGAACTACTTCCCCAGTAAGCAAGACATCC...GCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATCCACACCATCTAATACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198447.2 |
||
| 3UTR CAA 72 bp | GGATGCAACAGGGATCAAGTGTCAGGAGCAGTTTGGTaGCAGACAGGGCCCTTAGAGGTGTTAGTGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GCNRDQVSGAVW*QTGPLEVLVSQ Trigger: TTGGCTCACTAACACCTCTAAGGGCCCTGTCTGCAACCAAACTGCTCCTGACACTTGATCCCTGTTGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| 3UTR CAA 72 bp | GAGAAACTTGTAAATGACTCCAGCCTGGTCTTCCGATaGCACCACTTCACAGACCACAGAGGAGGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKLVNDSSLVFR*HHFTDHRGGVS Trigger: GGACACCCCTCCTCTGTGGTCTGTGAAGTGGTGCAATCGGAAGACCAGGCTGGAGTCATTTACAAGTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACACCTCCTGCTTCTCCATCACTGCAACAGAAAGGACAATAGTCAAGGGTCTCCACAGGCAGCCCTaGCTTGTTCTCGAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TNTSCFSITATERTIVKGLHRQP*LVLEGH Trigger: ATGGCCTTCGAGAACAAGGCAGGGCTGCCTGTGGAG...ACCCTTGACTATTGTCCTTTCTGTTGCAGTGATGGAGAAGCAGGAGGTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR GCA 90 bp | CTATTTCCCAGTCAGAGCACTGCAATAACGAGGGCTCTAAGAAGCGGTCCCACCTCTTTCAGGTTCTCCTaGAGGATCGTGTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LFPSQSTAITRALRSGPTSFRFS*RIVSFT Trigger: TGTGAAGGACACGATCCTGCAGGAGAACCTGAAAGA...GGTGGGACCGCTTCTTAGAGCCCTCGTTATTGCAGTGCTCTGACTGGGAAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CCA 90 bp | GTGTCCCCAGGTTTTACAGATCAACAGCAGAGTGATGGTGTGGATTCAGTAGTCATGCCGTCGAAGCACTaGAACCACTTCTGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSPGFTDQQQSDGVDSVVMPSKH*NHFWRC Trigger: ACAGCGCCAGAAGTGGTTCCAGTGCTTCGACGGCAT...GACTACTGAATCCACACCATCACTCTGCTGTTGATCTGTAAAACCTGGGGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| 3UTR CAA 72 bp | CACCTGCGTTCTGCTCAGCTAGCTCAAGTTCACATCTaGCTACTCACATGCTGCCTTCTGGTTTTCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLRSAQLAQVHI*LLTCCLLVFKV Trigger: CACTTTGAAAACCAGAAGGCAGCATGTGAGTAGCAAGATGTGAACTTGAGCTAGCTGAGCAGAACGCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTGGTGGCTGAAATGAGCCAAGACCAGGATGCAACAGGGATCAAGTGTCAGTTGAAATCTGGGAAGTaGTTCTTAATGCTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLVAEMSQDQDATGIKCQLKSGK*FLMLTD Trigger: GTCTGTGAGCATTAAGAAGCACTTCCCAGATTTCAA...CTGACACTTGATCCCTGTTGCATCCTGGTCTTGGCTCATTTCAGCCACCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGGTTTTACAGATCAACAGCAGAGTGATGGTGTGGATTCAGTAGTCTCAAGAAGAGCTTGTTGTTaGCGATGGTCTCGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGFTDQQQSDGVDSVVSRRACC*RWSRRC Trigger: ACATCTTCGAGACCATCGTCAACAACAAGCTCTTCT...TGAGACTACTGAATCCACACCATCACTCTGCTGTTGATCTGTAAAACCTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS-3UTR CAA 90 bp | CTACCGTGGGGAGTGTGGACACCTGACCCCGCCTGCGCCTTTGCGAGACTCGGACGGTGCGGGTCGCCCTaGAAATCTGGGAAGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPWGVWTPDPACAFARLGRCGSP*KSGKCF Trigger: GAAGCACTTCCCAGATTTCAAGGGCGACCCGCACCG...TCCGAGTCTCGCAAAGGCGCAGGCGGGGTCAGGTGTCCACACTCCCCACGGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CAA 90 bp | GGATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGACTCCACCAGCCGGTaGGTGCGCCTGTCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GFEMPTAGPCRRQTHQNHDSTSR*VRLSSM Trigger: CATGGAGGACAGGCGCACCAACCGGCTGGTGGAGTC...GTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS-3UTR CAA 90 bp | GGATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACTGGTGGAACAGGGGCTaGCTGCGGTTCCTGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFEMPTAGPCRRQTHQNHWWNRG*LRFLRF Trigger: GAAGCGCAGGAACCGCAGCAAGCCCCTGTTCCACCA...GTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAAAGAACACTCGGGGGAAGTTGTGAGCCACACCCCAGCTCCCAGAAAGTCGACTCCACCAGCCGGTaGGTGCGCCTGTCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SQRTLGGSCEPHPSSQKVDSTSR*VRLSSM Trigger: CATGGAGGACAGGCGCACCAACCGGCTGGTGGAGTC...GACTTTCTGGGAGCTGGGGTGTGGCTCACAACTTCCCCCGAGTGTTCTTTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS GCA 90 bp | GGCTGGCACGTAGAGCTGGAAGGTGGCAGGCTCCACAGGCAGCCCTaGCTTGTTCTCGAAGGCCATCAGAAACATCCCGTGCTTCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GWHVELEGGRLHRQP*LVLEGHQKHPVLLV Trigger: AACGAGAAGCACGGGATGTTTCTGATGGCCTTCGAGAACAAGGCAGGGCTGCCTGTGGAGCCTGCCACCTTCCAGCTCTACGTGCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CAA 90 bp | GACACTCCCGCGTCCTCTTGCCCGGAGCTCGCTGGTGTGGCTGGTAGTCCAGCAACGTTGAAGAAGAGCTaGTTGTTGACGATGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DTPASSCPELAGVAGSPATLKKS*LLTMVS Trigger: CGAGACCATCGTCAACAACAAGCTCTTCTTCAACGT...TGCTGGACTACCAGCCACACCAGCGAGCTCCGGGCAAGAGGACGCGGGAGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CAA 90 bp | GATTCGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGGAACCCTTAAGGATGTaGTCGAAGATGGTGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DSRCPLQVHAGGRHTRTTEPLRM*SKMVSR Trigger: CCGCGACACCATCTTCGACAACATCCTTAAGGGTTC...CGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CAA 90 bp | CGAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGGGACGTTGAAGAAGAGCTaGTTGTTGACGATGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RDAHCRSMQAADTPEPRGTLKKS*LLTMVS Trigger: CGAGACCATCGTCAACAACAAGCTCTTCTTCAACGT...CCCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS GCA 90 bp | TCGAAGGCCATCAGAAACATCCCGTGCTTCTCGTTCTCAGAGTGCTaGCAGGGAATGCCGAGCTTGTCTCGAGCGTCCACAAGAACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKAIRNIPCFSFSEC*QGMPSLSRASTRTL Trigger: GAGGGTTCTTGTGGACGCTCGAGACAAGCTCGGCATTCCCTGGCAGCACTCTGAGAACGAGAAGCACGGGATGTTTCTGATGGCCTTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS GCA 90 bp | ACAGGCAGCCCTGCCTTGTTCTCGAAGGCCATCAGAAACATCCCGTaGTTCTCGTTCTCAGAGTGCTGCCAGGGAATGCCGAGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGSPALFSKAIRNIP*FSFSECCQGMPSLS Trigger: AGACAAGCTCGGCATTCCCTGGCAGCACTCTGAGAACGAGAAGCACGGGATGTTTCTGATGGCCTTCGAGAACAAGGCAGGGCTGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CAA 90 bp | GAGATGCCCACTGCAGGTCCATGCAGGCGGCAGACACACCAGAACCACGTGGGCTTGAAGAAGAGCTTGTaGTTGACGATGGTCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EMPTAGPCRRQTHQNHVGLKKSL*LTMVSK Trigger: CTTCGAGACCATCGTCAACAACAAGCTCTTCTTCAA...GCCCACGTGGTTCTGGTGTGTCTGCCGCCTGCATGGACCTGCAGTGGGCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS GCA 90 bp | TTCTCGAAGGCCATCAGAAACATCCCGTGCTTCTCGTTCTCAGAGTaGTGCCAGGGAATGCCGAGCTTGTCTCGAGCGTCCACAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: FSKAIRNIPCFSFSE*CQGMPSLSRASTRT Trigger: GGTTCTTGTGGACGCTCGAGACAAGCTCGGCATTCCCTGGCAGCACTCTGAGAACGAGAAGCACGGGATGTTTCTGATGGCCTTCGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGCACTCTTGAGCCAGGTATTAGATGGTGTGGATTCGAGATGCCCACTGCACGGTGCGGGTCGCCCTaGAAATCTGGGAAGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSTLEPGIRWCGFEMPTARCGSP*KSGKCF Trigger: GAAGCACTTCCCAGATTTCAAGGGCGACCCGCACCG...TGCAGTGGGCATCTCGAATCCACACCATCTAATACCTGGCTCAAGAGTGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CAA 90 bp | ACAAACACCTCCTGCTTCTCCATCACTGCAACAGAAAGGACAATAGTCAAGGGTTGGTGGAACAGGGGCTaGCTGCGGTTCCTGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNTSCFSITATERTIVKGWWNRG*LRFLRF Trigger: GAAGCGCAGGAACCGCAGCAAGCCCCTGTTCCACCA...ACCCTTGACTATTGTCCTTTCTGTTGCAGTGATGGAGAAGCAGGAGGTGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CAA 90 bp | GGGCCCACCAAGCAGTCGAGGCAAGAAGATGCTCTTGAGCTGCAGAGCATCTCTAAGAAGAGCTTGTTGTaGACGATGGTCTCGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GPTKQSRQEDALELQSISKKSLL*TMVSKM Trigger: CATCTTCGAGACCATCGTCAACAACAAGCTCTTCTT...AGAGATGCTCTGCAGCTCAAGAGCATCTTCTTGCCTCGACTGCTTGGTGGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
||
| CDS-3UTR CAA 90 bp | CAACAAGGAAGAGTTTCTGTAGAGAGGCGAAAGCTGTGTCCCCAGGTTTTACAGGAACCCTTAAGGATGTaGTCGAAGATGGTGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QQGRVSVERRKLCPQVLQEPLRM*SKMVSR Trigger: CCGCGACACCATCTTCGACAACATCCTTAAGGGTTC...CTGTAAAACCTGGGGACACAGCTTTCGCCTCTCTACAGAAACTCTTCCTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CAA 90 bp | CAACAAGGAAGAGTTTCTGTAGAGAGGCGAAAGCTGTGTCCCCAGGTTTTACAGTTGAAGAAGAGCTTGTaGTTGACGATGGTCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QQGRVSVERRKLCPQVLQLKKSL*LTMVSK Trigger: CTTCGAGACCATCGTCAACAACAAGCTCTTCTTCAA...CTGTAAAACCTGGGGACACAGCTTTCGCCTCTCTACAGAAACTCTTCCTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGAGAGGCGAAAGCTGTGTCCCCAGGTTTTACAGATCAACAGCAGAGTGATAGGATGATGGAGACGTaGAAGAAGAGCTTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CREAKAVSPGFTDQQQSDRMMET*KKSLLL Trigger: CAACAACAAGCTCTTCTTCAACGTCTCCATCATCCT...ATCACTCTGCTGTTGATCTGTAAAACCTGGGGACACAGCTTTCGCCTCTCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCAGGTTTTACAGATCAACAGCAGAGTGATGGTGTGGATTCAGTAGTCTCAAGGATGATGGAGACGTaGAAGAAGAGCTTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGFTDQQQSDGVDSVVSRMMET*KKSLLL Trigger: CAACAACAAGCTCTTCTTCAACGTCTCCATCATCCT...TGAGACTACTGAATCCACACCATCACTCTGCTGTTGATCTGTAAAACCTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
||
| CDS CAA 72 bp | GTGTCTATGGCGGTGGTGAAGTGGTGGAACAGGGGCTaGCTGCGGTTCCTGCGCTTCCTGTCGAAGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: VSMAVVKWWNRG*LRFLRFLSKHC Trigger: GCAGTGCTTCGACAGGAAGCGCAGGAACCGCAGCAAGCCCCTGTTCCACCACTTCACCACCGCCATAGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS GCA 72 bp | GTAGAGCTGGAAGGTGGCAGGCTCCACAGGCAGCCCTaGCTTGTTCTCGAAGGCCATCAGAAACATCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: VELEGGRLHRQP*LVLEGHQKHPV Trigger: CACGGGATGTTTCTGATGGCCTTCGAGAACAAGGCAGGGCTGCCTGTGGAGCCTGCCACCTTCCAGCTCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS CCA 72 bp | ACCATGAACAGGATAGATGTGATGCCGTCGAAGCACTaGAACCACTTCTGGCGCTGTGACCTCTGGCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: TMNRIDVMPSKH*NHFWRCDLWPP Trigger: GGGCGGCCAGAGGTCACAGCGCCAGAAGTGGTTCCAGTGCTTCGACGGCATCACATCTATCCTGTTCATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS CCA 72 bp | ACCAGCCGGTTGGTGCGCCTGTCCTCCATGAGGACCTaGTCATACTCGCTCGAGGACACCATGAACAGGATA | + |
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Preference number: 6 (lower is better) Translates to: TSRLVRLSSMRT*SYSLEDTMNRI Trigger: TATCCTGTTCATGGTGTCCTCGAGCGAGTATGACCAGGTCCTCATGGAGGACAGGCGCACCAACCGGCTGGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS CAA 72 bp | CGAGCGTCCACAAGAACCCTCGAACCCTTAAGGATGTaGTCGAAGATGGTGTCGCGGAACTCCAGCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RASTRTLEPLRM*SKMVSRNSSSA Trigger: GGCGCTGCTGGAGTTCCGCGACACCATCTTCGACAACATCCTTAAGGGTTCGAGGGTTCTTGTGGACGCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS GCA 72 bp | CCTGCCTTGTTCTCGAAGGCCATCAGAAACATCCCGTaGTTCTCGTTCTCAGAGTGCTGCCAGGGAATGCCG | + |
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Preference number: 6 (lower is better) Translates to: PALFSKAIRNIP*FSFSECCQGMP Trigger: CGGCATTCCCTGGCAGCACTCTGAGAACGAGAAGCACGGGATGTTTCTGATGGCCTTCGAGAACAAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS GCA 72 bp | ATCAGAAACATCCCGTGCTTCTCGTTCTCAGAGTGCTaGCAGGGAATGCCGAGCTTGTCTCGAGCGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: IRNIPCFSFSEC*QGMPSLSRAST Trigger: TGTGGACGCTCGAGACAAGCTCGGCATTCCCTGGCAGCACTCTGAGAACGAGAAGCACGGGATGTTTCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS CCA 72 bp | GACGTCCTCCAGCCGGTGCGGGTCGCCCTTGAAATCTaGGAAGTGCTTCTTAATGCTCACAGACTTCACCTT | + |
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Preference number: 6 (lower is better) Translates to: DVLQPVRVALEI*EVLLNAHRLHL Trigger: AAGGTGAAGTCTGTGAGCATTAAGAAGCACTTCCCAGATTTCAAGGGCGACCCGCACCGGCTGGAGGACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS CAA 72 bp | TTCTCGTTCTCAGAGTGCTGCCAGGGAATGCCGAGCTaGTCTCGAGCGTCCACAAGAACCCTCGAACCCTTA | + |
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Preference number: 6 (lower is better) Translates to: FSFSECCQGMPS*SRASTRTLEPL Trigger: TAAGGGTTCGAGGGTTCTTGTGGACGCTCGAGACAAGCTCGGCATTCCCTGGCAGCACTCTGAGAACGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS CAA 72 bp | GATTCCCTTGGTGGCCTTTCTAGCCAGCAGGATGTCTaGCTTACTGGGGAAGTAGTTCAGCTGGCCAATCCG | + |
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Preference number: 6 (lower is better) Translates to: DSLGGLSSQQDV*LTGEVVQLANP Trigger: CGGATTGGCCAGCTGAACTACTTCCCCAGTAAGCAAGACATCCTGCTGGCTAGAAAGGCCACCAAGGGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| CDS CAA 90 bp | ATGTTCCACGATTCCCTTGGTGGCCTTTCTAGCCAGCAGGATGTCTaGCTTACTGGGGAAGTAGTTCAGCTGGCCAATCCGGTCCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: MFHDSLGGLSSQQDV*LTGEVVQLANPVQV Trigger: AACTTGGACCGGATTGGCCAGCTGAACTACTTCCCCAGTAAGCAAGACATCCTGCTGGCTAGAAAGGCCACCAAGGGAATCGTGGAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000153.9 |
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| CDS CAA 90 bp | TTAAATGGGATTTTCTTTATAACGAAGTCATGTTCCACGATTCCCTaGGTGGCCTTTCTAGCCAGCAGGATGTCTTGCTTACTGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LNGIFFITKSCSTIP*VAFLASRMSCLLGK Trigger: CTTCCCCAGTAAGCAAGACATCCTGCTGGCTAGAAAGGCCACCAAGGGAATCGTGGAACATGACTTCGTTATAAAGAAAATCCCATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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| CDS CAA 72 bp | ATTTTCTTTATAACGAAGTCATGTTCCACGATTCCCTaGGTGGCCTTTCTAGCCAGCAGGATGTCTTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: IFFITKSCSTIP*VAFLASRMSCL Trigger: TAAGCAAGACATCCTGCTGGCTAGAAAGGCCACCAAGGGAATCGTGGAACATGACTTCGTTATAAAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000153.9 ENSMUST00000198447.2 |
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