Pregenerated sensors for GMPS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027823Ensembl transcript IDs: ENSMUST00000029405.8
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACGAGGGCTTGCCTTCTAACATCACTCTGCAGAGTCTAGAAGAATaGGGACTGGGGAGGATCACACAGGGGAGCAGTGGGAAAGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: NEGLPSNITLQSLEE*GLGRITQGSSGKAR Trigger: CCTTGCTTTCCCACTGCTCCCCTGTGTGATCCTCCCCAGTCCCCATTCTTCTAGACTCTGCAGAGTGATGTTAGAAGGCAAGCCCTCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR TCA 90 bp | TACTGCCTACTTTCTCAGGCTTGTATGGCTGTCATAAAGAACCTGTaGGAACTATTGGCAATGGAATCAAGTCCTGCCCTGGTCTTGAAC | + |
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Preference number: 1 (lower is better) Translates to: YCLLSQACMAVIKNL*ELLAMESSPALVLN Trigger: GTTCAAGACCAGGGCAGGACTTGATTCCATTGCCAATAGTTCTCACAGGTTCTTTATGACAGCCATACAAGCCTGAGAAAGTAGGCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR TCA 90 bp | CAGCTCCACACTAAGCCATGGATCACTGCTATGAGAGCTCAGATATaGAGTAGCTGTTTCACGAACATTTTTCACAGTACTGCATACCAT | + |
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Preference number: 1 (lower is better) Translates to: QLHTKPWITAMRAQI*SSCFTNIFHSTAYH Trigger: ATGGTATGCAGTACTGTGAAAAATGTTCGTGAAACAGCTACTTCATATCTGAGCTCTCATAGCAGTGATCCATGGCTTAGTGTGGAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CCA 90 bp | GGCTGGAATACACTTAACAGAAGAATAGCTCCCTCCCCTCCCAGTTaGTTCTTAAAGTCACTGGTAACAATTTCCAAGTTAAGCTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: GWNTLNRRIAPSPPS*FLKSLVTISKLSLF Trigger: AAACAAGCTTAACTTGGAAATTGTTACCAGTGACTTTAAGAACCAACTGGGAGGGGAGGGAGCTATTCTTCTGTTAAGTGTATTCCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CCA 90 bp | TTATGGTTGCATGCAGCTACTACAAGATGGGGTGGGCAGGAGAAATaGTATAATCCCATCACTGAGATACATCTAAAAACTTGTCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: LWLHAATTRWGGQEK*YNPITEIHLKTCPQ Trigger: TTGAGGACAAGTTTTTAGATGTATCTCAGTGATGGGATTATACCATTTCTCCTGCCCACCCCATCTTGTAGTAGCTGCATGCAACCATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR TCA 90 bp | GGCTATGAGAATCTAAGTTCTAACACAGCAAGGATATCAATTTTATaGTTTATGGTTGCATGCAGCTACTACAAGATGGGGTGGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: GYENLSSNTARISIL*FMVACSYYKMGWAG Trigger: TCCTGCCCACCCCATCTTGTAGTAGCTGCATGCAACCATAAATCATAAAATTGATATCCTTGCTGTGTTAGAACTTAGATTCTCATAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CCA 90 bp | CTACATACAGCGTGCCTACTGTTGAAAGCTGGCATCTTGATATTCTaGGGACTCATTTGGCTGTTAAATACTCACAAACATACTACAACT | + |
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Preference number: 1 (lower is better) Translates to: LHTACLLLKAGILIF*GLIWLLNTHKHTTT Trigger: AGTTGTAGTATGTTTGTGAGTATTTAACAGCCAAATGAGTCCCCAGAATATCAAGATGCCAGCTTTCAACAGTAGGCACGCTGTATGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR TCA 90 bp | TGGTCATCCATCGTTATATACAGATATCAATGGTCTATACATAACTaGGGCAAAAGTAAGAACAATCTGTCTGCACTTGGGCAATGGTGC | + |
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Preference number: 1 (lower is better) Translates to: WSSIVIYRYQWSIHN*GKSKNNLSALGQWC Trigger: GCACCATTGCCCAAGTGCAGACAGATTGTTCTTACTTTTGCCTCAGTTATGTATAGACCATTGATATCTGTATATAACGATGGATGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR TCA 90 bp | AACATTCCCTCTCCCAAAGAAAAAGAACAAGTTCTCAGACAGCCTTaGGGAGAGATTAAATACTCTTTGTACACAGATGTAGGAACTAGT | + |
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Preference number: 1 (lower is better) Translates to: NIPSPKEKEQVLRQP*GEIKYSLYTDVGTS Trigger: ACTAGTTCCTACATCTGTGTACAAAGAGTATTTAATCTCTCCTCAAGGCTGTCTGAGAACTTGTTCTTTTTCTTTGGGAGAGGGAATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR GCA 90 bp | AGGGCTGGGGTATCATTAAACTCCTTCCATAATAAATCCCTGGTATaGTACATCTTTGAAGCATCTTACATTTTACTTTCCTTGTGTCAT | + |
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Preference number: 1 (lower is better) Translates to: RAGVSLNSFHNKSLV*YIFEASYILLSLCH Trigger: ATGACACAAGGAAAGTAAAATGTAAGATGCTTCAAAGATGTAGCATACCAGGGATTTATTATGGAAGGAGTTTAATGATACCCCAGCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR GCA 90 bp | CAGCAGATACTTTTGCTAGAACAAGGTTTTCTATGTAATCAAACATaGACTGATACTTTGGTAAACATTCTGTACTTGGCAGTTCCCACT | + |
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Preference number: 1 (lower is better) Translates to: QQILLLEQGFLCNQT*TDTLVNILYLAVPT Trigger: AGTGGGAACTGCCAAGTACAGAATGTTTACCAAAGTATCAGTGCATGTTTGATTACATAGAAAACCTTGTTCTAGCAAAAGTATCTGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCGCAAGGTCAGAACACTaGGAGGGAGGATGCTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: KAIPGHRLEALTRQSTVSARSEH*EGGCWY Trigger: GTACCAGCATCCTCCCTCCCAGTGTTCTGACCTTGC...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCGCAGCTACTACAAGATaGGGTGGGCAGGAGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: KAIPGHRLEALTRQSTVSAATTR*GGQEKW Trigger: CCATTTCTCCTGCCCACCCCATCTTGTAGTAGCTGC...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCGAGAACTATTGGCAATaGAATCAAGTCCTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KAIPGHRLEALTRQSTVSENYWQ*NQVLPW Trigger: CCAGGGCAGGACTTGATTCCATTGCCAATAGTTCTC...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCGAGATCTTTTCCTCTTaGTTCAGCAGCAGTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KAIPGHRLEALTRQSTVSEIFSS*FSSSFW Trigger: CCAGAAACTGCTGCTGAACCAAGAGGAAAAGATCTC...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCGCTGGTGGCCACAGATaGATGTTTGTGTTTATTGTT | + |
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Preference number: 2 (lower is better) Translates to: KAIPGHRLEALTRQSTVSAGGHR*MFVFIV Trigger: AACAATAAACACAAACATTCATCTGTGGCCACCAGC...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTTGGGCAATGGTGCCATGATTATTTACCCAGACACACTAACGCTTCCTTCCATGGATCACTGCTATaGGAGCTCAGATATGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: ALGQWCHDYLPRHTNASFHGSLL*ELRYEV Trigger: TACTTCATATCTGAGCTCTCATAGCAGTGATCCATG...GAAGGAAGCGTTAGTGTGTCTGGGTAAATAATCATGGCACCATTGCCCAAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTCCTGCCCTGGTCTTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGTGGGCAATGGTGCCATaGTTATTTACCCAGACACAC | + |
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Preference number: 2 (lower is better) Translates to: SSPALVLNLLQKLVEKMLWAMVP*LFTQTH Trigger: GTGTGTCTGGGTAAATAATCATGGCACCATTGCCCA...CAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAAGACCAGGGCAGGACTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 90 bp | TTAAGTGCTATCCAGCTTTTCCACTGTCTCTTGCCATGCCTTTTCTaGCTTATAACCAGGAATGCAACTAGGCATGAGGCTCAATTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LSAIQLFHCLLPCLF*LITRNATRHEAQLV Trigger: TACCAATTGAGCCTCATGCCTAGTTGCATTCCTGGTTATAAGCAAGAAAAGGCATGGCAAGAGACAGTGGAAAAGCTGGATAGCACTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCTTCAATTACCACAAATaGTCCCCAATCTCAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: KAIPGHRLEALTRQSTVSFNYHK*SPISTK Trigger: TTTTGTTGAGATTGGGGACCATTTGTGGTAATTGAA...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 90 bp | GGTCTATACATAACTGAGGCAAAAGTAAGAACAATCTGTCTGCACTaGGGCAATGGTGCCATGATTATTTACCCAGACACACTAACGCTT | + |
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Preference number: 2 (lower is better) Translates to: GLYITEAKVRTICLH*GNGAMIIYPDTLTL Trigger: AAGCGTTAGTGTGTCTGGGTAAATAATCATGGCACCATTGCCCAAGTGCAGACAGATTGTTCTTACTTTTGCCTCAGTTATGTATAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 90 bp | GTGACTCTTCTACATACAGCGTGCCTACTGTTGAAAGCTGGCATCTaGATATTCTGGGGACTCATTTGGCTGTTAAATACTCACAAACAT | + |
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Preference number: 2 (lower is better) Translates to: VTLLHTACLLLKAGI*IFWGLIWLLNTHKH Trigger: ATGTTTGTGAGTATTTAACAGCCAAATGAGTCCCCAGAATATCAAGATGCCAGCTTTCAACAGTAGGCACGCTGTATGTAGAAGAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR GCA 90 bp | TTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGGCAAATACCCTGCATCAGGCACTTGGGCAATGGTaGCATGATTATTTACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LNLLQKLVEKMLANTLHQALGQW*HDYLPR Trigger: TCTGGGTAAATAATCATGGCACCATTGCCCAAGTGC...CTGATGCAGGGTATTTGCCAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAAATACATGATGAACTTGAGGATGAGCCACATAAATCCTGTTTCAAGGAGAGTTAAGAGCACTGACTaGTCTTCCAGAGGTCGTGAG | + |
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Preference number: 2 (lower is better) Translates to: EKYMMNLRMSHINPVSRRVKSTD*SSRGRE Trigger: CTCACGACCTCTGGAAGAGCAGTCAGTGCTCTTAAC...TCTCCTTGAAACAGGATTTATGTGGCTCATCCTCAAGTTCATCATGTATTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATAGGAAGAAAGAGGGTAAATCAGTCCATGGGGGTATACAGATCTCAACATTCTGCACTTGGGCAATaGTGCCATGATTATTTACCC | + |
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Preference number: 2 (lower is better) Translates to: EIGRKRVNQSMGVYRSQHSALGQ*CHDYLP Trigger: GGGTAAATAATCATGGCACCATTGCCCAAGTGCAGA...ATGTTGAGATCTGTATACCCCCATGGACTGATTTACCCTCTTTCTTCCTATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCAGACAACAGACTGCAACCTGGGGTAAAAGCAAGTGAGAGAAACATGGTAAACTTAACTTTGTACTaGCTACTTTCTCAGGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: KPDNRLQPGVKASERNMVNLTLY*LLSQAC Trigger: ACAAGCCTGAGAAAGTAGGCAGTACAAAGTTAAGTT...TACCATGTTTCTCTCACTTGCTTTTACCCCAGGTTGCAGTCTGTTGTCTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATAGGAAGAAAGAGGGTAAATCAGTCCATGGGGGTATACAGATCTCAACATGGCATCTTGATATTCTaGGGACTCATTTGGCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: EIGRKRVNQSMGVYRSQHGILIF*GLIWLL Trigger: TAACAGCCAAATGAGTCCCCAGAATATCAAGATGCC...ATGTTGAGATCTGTATACCCCCATGGACTGATTTACCCTCTTTCTTCCTATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAGTCCTGCCCTGGTCTTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGCATTTTTCACAGTACTaGATACCATTAACAAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SSPALVLNLLQKLVEKMLHFSQY*IPLTSG Trigger: ACCACTTGTTAATGGTATGCAGTACTGTGAAAAATG...CAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAAGACCAGGGCAGGACTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGCTGGTCATCCATCGTTATATACAGATATCAATGGTCTATACATAACTCTCCACACTAAGCCATaGATCACTGCTATGAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: TEAGHPSLYTDINGLYITLHTKP*ITAMRA Trigger: AGCTCTCATAGCAGTGATCCATGGCTTAGTGTGGAG...AGTTATGTATAGACCATTGATATCTGTATATAACGATGGATGACCAGCTTCTGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAAATACATGATGAACTTGAGGATGAGCCACATAAATCCTGTTTCAAGGAGAACCTGTGAGAACTATTaGCAATGGAATCAAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: EKYMMNLRMSHINPVSRRTCENY*QWNQVL Trigger: CAGGACTTGATTCCATTGCCAATAGTTCTCACAGGT...TCTCCTTGAAACAGGATTTATGTGGCTCATCCTCAAGTTCATCATGTATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 90 bp | CCCAGTTGGTTCTTAAAGTCACTGGTAACAATTTCCAAGTTAAGCTaGTTTGTCTTCTTGACTGTAACTATTTTCAATGGCCCACATGAA | + |
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Preference number: 2 (lower is better) Translates to: PSWFLKSLVTISKLS*FVFLTVTIFNGPHE Trigger: TTCATGTGGGCCATTGAAAATAGTTACAGTCAAGAAGACAAACAAGCTTAACTTGGAAATTGTTACCAGTGACTTTAAGAACCAACTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAAATACATGATGAACTTGAGGATGAGCCACATAAATCCTGTTTCAAGGAGAGTCATAAAGAACCTGTaGGAACTATTGGCAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: EKYMMNLRMSHINPVSRRVIKNL*ELLAME Trigger: TTCCATTGCCAATAGTTCTCACAGGTTCTTTATGAC...TCTCCTTGAAACAGGATTTATGTGGCTCATCCTCAAGTTCATCATGTATTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR GCA 90 bp | GAAATAGGAAGAAAGAGGGTAAATCAGTCCATGGGGGTATACAGATCTCAACATCAACAAAAACACATATaGAGATGTAGCAAAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: EIGRKRVNQSMGVYRSQHQQKHI*RCSKSH Trigger: ATGGCTTTTGCTACATCTGCATATGTGTTTTTGTTG...ATGTTGAGATCTGTATACCCCCATGGACTGATTTACCCTCTTTCTTCCTATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 90 bp | ACATCCCATATTCTTCCTGATTCTTGCTGTGTACAGCAGATACTTTaGCTAGAACAAGGTTTTCTATGTAATCAAACATGCACTGATACT | + |
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Preference number: 2 (lower is better) Translates to: TSHILPDSCCVQQIL*LEQGFLCNQTCTDT Trigger: AGTATCAGTGCATGTTTGATTACATAGAAAACCTTGTTCTAGCAAAAGTATCTGCTGTACACAGCAAGAATCAGGAAGAATATGGGATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR GCA 72 bp | AACTGGATAGATGACTCAGAGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCGTGAGTTCAACCCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: NWIDDSEVKSTD*SSRGREFNPQQ Trigger: TTGCTGGGGGTTGAACTCACGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTATCCAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR TCA 72 bp | GTTTCAAGGAGACAGAGGACCTATGCAGAGTCTGGTTaGTGTTGGGCCTTCATAAGACGAGGCAATGAGATT | + |
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Preference number: 3 (lower is better) Translates to: VSRRQRTYAESG*CWAFIRRGNEI Trigger: AATCTCATTGCCTCGTCTTATGAAGGCCCAACATCAACCAGACTCTGCATAGGTCCTCTGTCTCCTTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR TCA 72 bp | CTTTCTCAGGCTTGTATGGCTGTCATAAAGAACCTGTaGGAACTATTGGCAATGGAATCAAGTCCTGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: LSQACMAVIKNL*ELLAMESSPAL Trigger: CAGGGCAGGACTTGATTCCATTGCCAATAGTTCTCACAGGTTCTTTATGACAGCCATACAAGCCTGAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR GCA 72 bp | GAACCTGTGAGAACTATTGGCAATGGAATCAAGTCCTaGCCTGGTCTTGAACCTTCTCCAGAAGTTAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: EPVRTIGNGIKS*PGLEPSPEVSR Trigger: TCTACTAACTTCTGGAGAAGGTTCAAGACCAGGGCAGGACTTGATTCCATTGCCAATAGTTCTCACAGGTTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR GCA 72 bp | ACATTTCCATGGGCTGTGACTCTTCTACATACAGCGTaGCTACTGTTGAAAGCTGGCATCTTGATATTCTGG | + |
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Preference number: 3 (lower is better) Translates to: TFPWAVTLLHTA*LLLKAGILIFW Trigger: CCAGAATATCAAGATGCCAGCTTTCAACAGTAGGCACGCTGTATGTAGAAGAGTCACAGCCCATGGAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR TCA 72 bp | AATTCCTCAGACAGCAGCAACCAAAGTTGGCAAACGTaGACATTTCCATGGGCTGTGACTCTTCTACATACA | + |
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Preference number: 3 (lower is better) Translates to: NSSDSSNQSWQT*TFPWAVTLLHT Trigger: TGTATGTAGAAGAGTCACAGCCCATGGAAATGTTCACGTTTGCCAACTTTGGTTGCTGCTGTCTGAGGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CCA 72 bp | GGCAAAAGTAAGAACAATCTGTCTGCACTTGGGCAATaGTGCCATGATTATTTACCCAGACACACTAACGCT | + |
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Preference number: 3 (lower is better) Translates to: GKSKNNLSALGQ*CHDYLPRHTNA Trigger: AGCGTTAGTGTGTCTGGGTAAATAATCATGGCACCATTGCCCAAGTGCAGACAGATTGTTCTTACTTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CCA 72 bp | GGTAAATCAGTCCATGGGGGTATACAGATCTCAACATaGGTAACAATGTCGGTTACCTTTCAGATTCCCTAC | + |
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Preference number: 3 (lower is better) Translates to: GKSVHGGIQIST*VTMSVTFQIPY Trigger: GTAGGGAATCTGAAAGGTAACCGACATTGTTACCCATGTTGAGATCTGTATACCCCCATGGACTGATTTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CCA 72 bp | CATGCAGCTACTACAAGATGGGGTGGGCAGGAGAAATaGTATAATCCCATCACTGAGATACATCTAAAAACT | + |
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Preference number: 3 (lower is better) Translates to: HAATTRWGGQEK*YNPITEIHLKT Trigger: AGTTTTTAGATGTATCTCAGTGATGGGATTATACCATTTCTCCTGCCCACCCCATCTTGTAGTAGCTGCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CCA 72 bp | GCGTGCCTACTGTTGAAAGCTGGCATCTTGATATTCTaGGGACTCATTTGGCTGTTAAATACTCACAAACAT | + |
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Preference number: 3 (lower is better) Translates to: ACLLLKAGILIF*GLIWLLNTHKH Trigger: ATGTTTGTGAGTATTTAACAGCCAAATGAGTCCCCAGAATATCAAGATGCCAGCTTTCAACAGTAGGCACGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR-3UTR CAA 90 bp | AAACCAGACAACAGACTGCAACCTGGGGTAAAAGCAAGTGAGAGAAACATGGTATTAGTAGAAAAGATGTaGGCAAATACCCTGCATCAG | + |
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Preference number: 3 (lower is better) Translates to: KPDNRLQPGVKASERNMVLVEKM*ANTLHQ Trigger: CTGATGCAGGGTATTTGCCAACATCTTTTCTACTAA...TACCATGTTTCTCTCACTTGCTTTTACCCCAGGTTGCAGTCTGTTGTCTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CCA 72 bp | ACACTTAACAGAAGAATAGCTCCCTCCCCTCCCAGTTaGTTCTTAAAGTCACTGGTAACAATTTCCAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: TLNRRIAPSPPS*FLKSLVTISKL Trigger: TAACTTGGAAATTGTTACCAGTGACTTTAAGAACCAACTGGGAGGGGAGGGAGCTATTCTTCTGTTAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR TCA 72 bp | AGAACCCTCGATAATATATGCAGTGTTTTGATAATCTaGACATGTCAGGTCCTTCTGGTTCTTGCTTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: RTLDNICSVLII*TCQVLLVLASL Trigger: AAGGGAAGCAAGAACCAGAAGGACCTGACATGTTCAGATTATCAAAACACTGCATATATTATCGAGGGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR GCA 72 bp | TTCAGGGTTAGAACATCCCATATTCTTCCTGATTCTTaGTGTGTACAGCAGATACTTTTGCTAGAACAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FRVRTSHILPDS*CVQQILLLEQG Trigger: ACCTTGTTCTAGCAAAAGTATCTGCTGTACACAGCAAGAATCAGGAAGAATATGGGATGTTCTAACCCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR CCA 72 bp | CGAACATTTTTCACAGTACTGCATACCATTAACAAGTaGTTTCTAATGAGCCTCAGTTACACACAGTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RTFFTVLHTINK*FLMSLSYTQFL Trigger: GAGGAACTGTGTGTAACTGAGGCTCATTAGAAACCACTTGTTAATGGTATGCAGTACTGTGAAAAATGTTCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR TCA 72 bp | TACATGCATACACAAACCTTTAGTTGTTCGTTTAAATaGAGACCAACCCCAAGCTTTGTGTCCACTGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: YMHTQTFSCSFK*RPTPSFVSTVK Trigger: CTTAACAGTGGACACAAAGCTTGGGGTTGGTCTTCATTTAAACGAACAACTAAAGGTTTGTGTATGCATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR CCA 72 bp | TTGAAAGCTGGCATCTTGATATTCTGGGGACTCATTTaGCTGTTAAATACTCACAAACATACTACAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LKAGILIFWGLI*LLNTHKHTTTG Trigger: TCCAGTTGTAGTATGTTTGTGAGTATTTAACAGCCAAATGAGTCCCCAGAATATCAAGATGCCAGCTTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR TCA 72 bp | TCTCCCAAAGAAAAAGAACAAGTTCTCAGACAGCCTTaGGGAGAGATTAAATACTCTTTGTACACAGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: SPKEKEQVLRQP*GEIKYSLYTDV Trigger: TACATCTGTGTACAAAGAGTATTTAATCTCTCCTCAAGGCTGTCTGAGAACTTGTTCTTTTTCTTTGGGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR TCA 72 bp | ATCGTTATATACAGATATCAATGGTCTATACATAACTaGGGCAAAAGTAAGAACAATCTGTCTGCACTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IVIYRYQWSIHN*GKSKNNLSALG Trigger: CCCAAGTGCAGACAGATTGTTCTTACTTTTGCCTCAGTTATGTATAGACCATTGATATCTGTATATAACGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR GCA 72 bp | CTTTTGCTAGAACAAGGTTTTCTATGTAATCAAACATaGACTGATACTTTGGTAAACATTCTGTACTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLLEQGFLCNQT*TDTLVNILYLA Trigger: TGCCAAGTACAGAATGTTTACCAAAGTATCAGTGCATGTTTGATTACATAGAAAACCTTGTTCTAGCAAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCGCACTCTTCGGTCAATaGCTTTCCCATACTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAIPGHRLEALTRQSTVSALFGQ*LSHTGL Trigger: GAGCCCAGTATGGGAAAGTCATTGACCGAAGAGTGC...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCCAGCACATATTACTCTaGTTGCCAGGCCAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAIPGHRLEALTRQSTVSQHILL*LPGQDL Trigger: CAGGTCCTGGCCTGGCAATCAGAGTAATATGTGCTG...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCCCAGGGAGCATCCTCTaGATACACAGAATTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAIPGHRLEALTRQSTVSPGSIL*IHRIRS Trigger: GGACCTAATTCTGTGTATGCAGAGGATGCTCCCTGG...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACACACTAACGCTTCCTTCCATTTTAATCATCCTCAGCTCCACACTAAGCGGCCGTAAAGTGCCTTaGGCGAGAAAAACCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PDTLTLPSILIILSSTLSGRKVP*ARKTSS Trigger: CGAGGAGGTTTTTCTCGCCCAAGGCACTTTACGGCC...GCTTAGTGTGGAGCTGAGGATGATTAAAATGGAAGGAAGCGTTAGTGTGTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCCTCCAGCATCCAGAATaGCAACAGCTCCTTCGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KAIPGHRLEALTRQSTVSLQHPE*QQLLRN Trigger: ATTACGAAGGAGCTGTTGTCATTCTGGATGCTGGAG...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCGCCAATGGTAAATATTaGTGGATCAAACCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAIPGHRLEALTRQSTVSANGKY*WIKPGS Trigger: GCTCCCTGGTTTGATCCAGCAATATTTACCATTGGC...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR TCA 90 bp | GCACTTGGGCAATGGTGCCATGATTATTTACCCAGACACACTAACGCTTCCTTCAGCTGTACAAACAGTTaGATCTACACCACCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGQWCHDYLPRHTNASFSCTNS*IYTTTE Trigger: CTCAGTGGTGGTGTAGATTCAACTGTTTGTACAGCT...GAAGGAAGCGTTAGTGTGTCTGGGTAAATAATCATGGCACCATTGCCCAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | GAAATAGGAAGAAAGAGGGTAAATCAGTCCATGGGGGTATACAGATCTCAACATTGCCAGGCCAGGACCTaGAAAAGGATGCCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EIGRKRVNQSMGVYRSQHCQART*KRMPGN Trigger: GTTTCCAGGCATCCTTTTCCAGGTCCTGGCCTGGCA...ATGTTGAGATCTGTATACCCCCATGGACTGATTTACCCTCTTTCTTCCTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR CAA 72 bp | TGGGCTGTGACTCTTCTACATACAGCGTGCCTACTGTaGAAAGCTGGCATCTTGATATTCTGGGGACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: WAVTLLHTACLL*KAGILIFWGLI Trigger: AATGAGTCCCCAGAATATCAAGATGCCAGCTTTCAACAGTAGGCACGCTGTATGTAGAAGAGTCACAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR GCA 90 bp | CCAGACACACTAACGCTTCCTTCCATTTTAATCATCCTCAGCTCCACACTAAGCTGCAGACTTGTAATTTaGATGAGCTTCTCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDTLTLPSILIILSSTLSCRLVI*MSFSWS Trigger: GGACCAGGAGAAGCTCATGCAAATTACAAGTCTGCA...GCTTAGTGTGGAGCTGAGGATGATTAAAATGGAAGGAAGCGTTAGTGTGTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGTCCTGCCCTGGTCTTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGGGCTGGTGTTTCCAATaGGAAGATTTCAGACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPALVLNLLQKLVEKMLGWCFQ*EDFRLH Trigger: GTGCAGTCTGAAATCTTCCCATTGGAAACACCAGCC...CAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAAGACCAGGGCAGGACTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR CAA 72 bp | ATCCAGCTTTTCCACTGTCTCTTGCCATGCCTTTTCTaGCTTATAACCAGGAATGCAACTAGGCATGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQLFHCLLPCLF*LITRNATRHEA Trigger: AGCCTCATGCCTAGTTGCATTCCTGGTTATAAGCAAGAAAAGGCATGGCAAGAGACAGTGGAAAAGCTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR TCA 90 bp | CCAGACACACTAACGCTTCCTTCCATTTTAATCATCCTCAGCTCCACACTAAGCTGTACAGCAATGACTTaGTCTTGGTTCAAAGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: PDTLTLPSILIILSSTLSCTAMT*SWFKAR Trigger: TCGTGCTTTGAACCAAGATCAAGTCATTGCTGTACA...GCTTAGTGTGGAGCTGAGGATGATTAAAATGGAAGGAAGCGTTAGTGTGTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGACAACAGACTGCAACCTGGGGTAAAAGCAAGTGAGAGAAACATGGTACATGAAGGCTGCTTCTaGAGTGGATCTCTATCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KPDNRLQPGVKASERNMVHEGCF*SGSLSK Trigger: TTTCGATAGAGATCCACTTCAGAAGCAGCCTTCATG...TACCATGTTTCTCTCACTTGCTTTTACCCCAGGTTGCAGTCTGTTGTCTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGTCCTGCCCTGGTCTTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGATCCTTGTTCCTTTATaGCGAAGGCTGGTGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPALVLNLLQKLVEKMLILVPL*RRLVFP Trigger: TGGAAACACCAGCCTTCGCCATAAAGGAACAAGGAT...CAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAAGACCAGGGCAGGACTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | GAAATAGGAAGAAAGAGGGTAAATCAGTCCATGGGGGTATACAGATCTCAACATGGAAACCAATTCTTCTaGCAGGTCAAGCTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EIGRKRVNQSMGVYRSQHGNQFF*QVKLSA Trigger: GGCAGAGAGCTTGACCTGCCAGAAGAATTGGTTTCC...ATGTTGAGATCTGTATACCCCCATGGACTGATTTACCCTCTTTCTTCCTATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGACAACAGACTGCAACCTGGGGTAAAAGCAAGTGAGAGAAACATGGTAGAATTCCAAGCTTTTTaGGGGCCTCTTCAACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KPDNRLQPGVKASERNMVEFQAF*GPLQQI Trigger: AATCTGTTGAAGAGGCCCTCAAAAAGCTTGGAATTC...TACCATGTTTCTCTCACTTGCTTTTACCCCAGGTTGCAGTCTGTTGTCTGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGTCCTGCCCTGGTCTTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGAATGTTCCCAGAACGTaGTACAACCTTGAATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSPALVLNLLQKLVEKMLNVPRT*YNLESI Trigger: GATGGATTCAAGGTTGTAGCACGTTCTGGGAACATT...CAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAAGACCAGGGCAGGACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | GAAATAGGAAGAAAGAGGGTAAATCAGTCCATGGGGGTATACAGATCTCAACATATGACTTTCCCATACTaGGCTCCAGCATCCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: EIGRKRVNQSMGVYRSQHMTFPY*APASRM Trigger: CATTCTGGATGCTGGAGCCCAGTATGGGAAAGTCAT...ATGTTGAGATCTGTATACCCCCATGGACTGATTTACCCTCTTTCTTCCTATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR CAA 72 bp | GAACTATTGGCAATGGAATCAAGTCCTGCCCTGGTCTaGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELLAMESSPALV*NLLQKLVEKML Trigger: CAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAAGACCAGGGCAGGACTTGATTCCATTGCCAATAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR CAA 72 bp | CTACATACAGCGTGCCTACTGTTGAAAGCTGGCATCTaGATATTCTGGGGACTCATTTGGCTGTTAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: LHTACLLLKAGI*IFWGLIWLLNT Trigger: AGTATTTAACAGCCAAATGAGTCCCCAGAATATCAAGATGCCAGCTTTCAACAGTAGGCACGCTGTATGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGACAACAGACTGCAACCTGGGGTAAAAGCAAGTGAGAGAAACATGGTACAATGTGTACAGCAATaGCTTGATCTTGGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPDNRLQPGVKASERNMVQCVQQ*LDLGSK Trigger: CTTTGAACCAAGATCAAGTCATTGCTGTACACATTG...TACCATGTTTCTCTCACTTGCTTTTACCCCAGGTTGCAGTCTGTTGTCTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR GCA 90 bp | GCACTTGGGCAATGGTGCCATGATTATTTACCCAGACACACTAACGCTTCCTTCTATTCATCATCTGCATaGCATAGCAAATTCCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALGQWCHDYLPRHTNASFYSSSA*HSKFLE Trigger: TTCTAGGAATTTGCTATGGCATGCAGATGATGAATA...GAAGGAAGCGTTAGTGTGTCTGGGTAAATAATCATGGCACCATTGCCCAAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGGCAAATACCCTGCATCAGCTTTATGGCGAAGGCTaGTGTTTCCAATGGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNLLQKLVEKMLANTLHQLYGEG*CFQWED Trigger: ATCTTCCCATTGGAAACACCAGCCTTCGCCATAAAG...CTGATGCAGGGTATTTGCCAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAATACATGATGAACTTGAGGATGAGCCACATAAATCCTGTTTCAAGGAGAAGCCCAACTTCAGGGTaGAACTGTACACCGTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKYMMNLRMSHINPVSRRSPTSG*NCTPYS Trigger: GCTATACGGTGTACAGTTCCACCCTGAAGTTGGGCT...TCTCCTTGAAACAGGATTTATGTGGCTCATCCTCAAGTTCATCATGTATTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGGCAAATACCCTGCATCAGAGTTCTGTGTCGTTGTaGTGGGTTTTGATGAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNLLQKLVEKMLANTLHQSSVSL*WVLMSS Trigger: CGAACTCATCAAAACCCACCACAACGACACAGAACT...CTGATGCAGGGTATTTGCCAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR CAA 72 bp | ATAACTGAGGCAAAAGTAAGAACAATCTGTCTGCACTaGGGCAATGGTGCCATGATTATTTACCCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: ITEAKVRTICLH*GNGAMIIYPDT Trigger: TGTGTCTGGGTAAATAATCATGGCACCATTGCCCAAGTGCAGACAGATTGTTCTTACTTTTGCCTCAGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| 3UTR CAA 72 bp | GTCTTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTaGGCAAATACCCTGCATCAGTCAAGACTTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLNLLQKLVEKM*ANTLHQSRLLS Trigger: GCTAAGAAGTCTTGACTGATGCAGGGTATTTGCCAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR TCA 90 bp | TTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGGCAAATACCCTGCATCAGCTGTTGTGCAGGCTTTaGCTCTTTGTAACAGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNLLQKLVEKMLANTLHQLLCRL*LFVTVY Trigger: ATACACTGTTACAAAGAGTCAAAGCCTGCACAACAG...CTGATGCAGGGTATTTGCCAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGCTGGTCATCCATCGTTATATACAGATATCAATGGTCTATACATAACTGGGAAGATTTCAGACTaGACAAAGAGCTCCCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TEAGHPSLYTDINGLYITGKISD*TKSSRT Trigger: AGTGCGGGAGCTCTTTGTGCAGTCTGAAATCTTCCC...AGTTATGTATAGACCATTGATATCTGTATATAACGATGGATGACCAGCTTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGCTGGTCATCCATCGTTATATACAGATATCAATGGTCTATACATAACTGATCAGGCCGTAAAGTaGCTTGGGCGAGAAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: TEAGHPSLYTDINGLYITDQAVK*LGREKP Trigger: AGGTTTTTCTCGCCCAAGGCACTTTACGGCCTGATC...AGTTATGTATAGACCATTGATATCTGTATATAACGATGGATGACCAGCTTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCTGGTCATCCATCGTTATATACAGATATCAATGGTCTATACATAACTGTTCGGCTTTACCACTaGCAACAAGGGACGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TEAGHPSLYTDINGLYITVRLYH*QQGTHF Trigger: AAAGTGCGTCCCTTGTTGCCAGTGGTAAAGCCGAAC...AGTTATGTATAGACCATTGATATCTGTATATAACGATGGATGACCAGCTTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAATACATGATGAACTTGAGGATGAGCCACATAAATCCTGTTTCAAGGAGATCTGTGTCGTTGTGGTaGGTTTTGATGAGTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EKYMMNLRMSHINPVSRRSVSLW*VLMSSA Trigger: AGCCGAACTCATCAAAACCCACCACAACGACACAGA...TCTCCTTGAAACAGGATTTATGTGGCTCATCCTCAAGTTCATCATGTATTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR TCA 90 bp | TTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGGCAAATACCCTGCATCAGAATCTACACCACCACTaGGTAAAACCAACACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNLLQKLVEKMLANTLHQNLHHH*VKPTLL Trigger: CAAAAGTGTTGGTTTTACTCAGTGGTGGTGTAGATT...CTGATGCAGGGTATTTGCCAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR GCA 90 bp | TCACGAACATTTTTCACAGTACTGCATACCATTAACAAGTGGTTTCTAATGAGCACATATTACTCTGATTaGCAGGCCAGGACCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRTFFTVLHTINKWFLMSTYYSD*QARTWK Trigger: TTTCCAGGTCCTGGCCTGGCAATCAGAGTAATATGT...GCTCATTAGAAACCACTTGTTAATGGTATGCAGTACTGTGAAAAATGTTCGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGTCCTGCCCTGGTCTTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGAAAGCATTGAGTGAATaGAGACTTGTAATTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSPALVLNLLQKLVEKMLKALSE*RLVICM Trigger: CATGCAAATTACAAGTCTGCATTCACTCAATGCTTT...CAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAAGACCAGGGCAGGACTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | GAAATAGGAAGAAAGAGGGTAAATCAGTCCATGGGGGTATACAGATCTCAACATAATGGTAAATATTGCTaGATCAAACCAGGGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: EIGRKRVNQSMGVYRSQHNGKYC*IKPGSI Trigger: GATGCTCCCTGGTTTGATCCAGCAATATTTACCATT...ATGTTGAGATCTGTATACCCCCATGGACTGATTTACCCTCTTTCTTCCTATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | TCACGAACATTTTTCACAGTACTGCATACCATTAACAAGTGGTTTCTAATGAGCCTGGAAAAGGATGCCTaGAAACCAATTCTTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTFFTVLHTINKWFLMSLEKDA*KPILLA Trigger: TGCCAGAAGAATTGGTTTCCAGGCATCCTTTTCCAG...GCTCATTAGAAACCACTTGTTAATGGTATGCAGTACTGTGAAAAATGTTCGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGGCAAATACCCTGCATCAGACCTACAGTCTTAATTaGCAGCAAGAAAGCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNLLQKLVEKMLANTLHQTYSLN*QQESIE Trigger: CTCAATGCTTTCTTGCTGCCAATTAAGACTGTAGGT...CTGATGCAGGGTATTTGCCAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACCTTCTCCAGAAGTTAGTAGAAAAGATGTTGGCAAATACCCTGCATCAGAGGCTCTTTAACTGGTaGACCAAAGATATAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LNLLQKLVEKMLANTLHQRLFNW*TKDIDN Trigger: GTTGTCTATATCTTTGGTCCACCAGTTAAAGAGCCT...CTGATGCAGGGTATTTGCCAACATCTTTTCTACTAACTTCTGGAGAAGGTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 72 bp | GTTGAAAGCTGGCATCTTGATATTCTGGGGACTCATTaGGCTGTTAAATACTCACAAACATACTACAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VESWHLDILGTH*AVKYSQTYYNW Trigger: CCAGTTGTAGTATGTTTGTGAGTATTTAACAGCCAAATGAGTCCCCAGAATATCAAGATGCCAGCTTTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 72 bp | TTAGTTGTTCGTTTAAATGAAGACCAACCCCAAGCTTaGTGTCCACTGTTAAGACTGGACAAGAAGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LVVRLNEDQPQA*CPLLRLDKKLT Trigger: TGTCAACTTCTTGTCCAGTCTTAACAGTGGACACAAAGCTTGGGGTTGGTCTTCATTTAAACGAACAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR TCA 90 bp | GAAAAATACATGATGAACTTGAGGATGAGCCACATAAATCCTGTTTCAAGGAGATCTTCTTTATCTCAGTaGCCATCTTTAGCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EKYMMNLRMSHINPVSRRSSLSQ*PSLAPP Trigger: AGGTGGTGCTAAAGATGGTCACTGAGATAAAGAAGA...TCTCCTTGAAACAGGATTTATGTGGCTCATCCTCAAGTTCATCATGTATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 72 bp | GACAGTACTTGTGGTGTAGAAAAATACATGATGAACTaGAGGATGAGCCACATAAATCCTGTTTCAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSTCGVEKYMMN*RMSHINPVSRR Trigger: TCTCCTTGAAACAGGATTTATGTGGCTCATCCTCAAGTTCATCATGTATTTTTCTACACCACAAGTACTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 72 bp | TTAGAACTTAACTTTGTACTGCCTACTTTCTCAGGCTaGTATGGCTGTCATAAAGAACCTGTGAGAACTATT | + |
|
Preference number: 4 (lower is better) Translates to: LELNFVLPTFSG*YGCHKEPVRTI Trigger: AATAGTTCTCACAGGTTCTTTATGACAGCCATACAAGCCTGAGAAAGTAGGCAGTACAAAGTTAAGTTCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 72 bp | ACTCCTTCCATAATAAATCCCTGGTATGCTACATCTTaGAAGCATCTTACATTTTACTTTCCTTGTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: TPSIINPWYATS*KHLTFYFPCVM Trigger: CATGACACAAGGAAAGTAAAATGTAAGATGCTTCAAAGATGTAGCATACCAGGGATTTATTATGGAAGGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| 3UTR CAA 72 bp | ATTCTTCCTGATTCTTGCTGTGTACAGCAGATACTTTaGCTAGAACAAGGTTTTCTATGTAATCAAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: ILPDSCCVQQIL*LEQGFLCNQTC Trigger: GCATGTTTGATTACATAGAAAACCTTGTTCTAGCAAAAGTATCTGCTGTACACAGCAAGAATCAGGAAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS GCA 90 bp | CACTGGCAACAAGGGACGCACTTTCGATTAGATCAGGCCGTAAAGTaGCTTGGGCGAGAAAAACCTCCTCGGGCTTCAGACTCATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HWQQGTHFRLDQAVK*LGREKPPRASDSFL Trigger: GAGAAATGAGTCTGAAGCCCGAGGAGGTTTTTCTCGCCCAAGGCACTTTACGGCCTGATCTAATCGAAAGTGCGTCCCTTGTTGCCAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CCA 90 bp | GCAACAAGGGACGCACTTTCGATTAGATCAGGCCGTAAAGTGCCTTaGGCGAGAAAAACCTCCTCGGGCTTCAGACTCATTTCTCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: ATRDALSIRSGRKVP*ARKTSSGFRLISPI Trigger: AATTGGAGAAATGAGTCTGAAGCCCGAGGAGGTTTTTCTCGCCCAAGGCACTTTACGGCCTGATCTAATCGAAAGTGCGTCCCTTGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR CAA 90 bp | AAACCAGACAACAGACTGCAACCTGGGGTAAAAGCAAGTGAGAGAAACATGGTACCAGCATTCTCCGGCTaGGAATCTCCGTTGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPDNRLQPGVKASERNMVPAFSG*ESPLHR Trigger: CCTGTGCAACGGAGATTCCAAGCCGGAGAATGCTGG...TACCATGTTTCTCTCACTTGCTTTTACCCCAGGTTGCAGTCTGTTGTCTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS GCA 90 bp | TCCTTTATGGCGAAGGCTGGTGTTTCCAATGGGAAGATTTCAGACTaGACAAAGAGCTCCCGCACTCTTCGGTCAATGACTTTCCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: SFMAKAGVSNGKISD*TKSSRTLRSMTFPY Trigger: GTATGGGAAAGTCATTGACCGAAGAGTGCGGGAGCTCTTTGTGCAGTCTGAAATCTTCCCATTGGAAACACCAGCCTTCGCCATAAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS GCA 90 bp | TCAGCACATATTACTCTGATTGCCAGGCCAGGACCTGGAAAAGGATaGCTGGAAACCAATTCTTCTGGCAGGTCAAGCTCTCTGCCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SAHITLIARPGPGKG*LETNSSGRSSSLPK Trigger: TTTAGGCAGAGAGCTTGACCTGCCAGAAGAATTGGTTTCCAGGCATCCTTTTCCAGGTCCTGGCCTGGCAATCAGAGTAATATGTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CCA 90 bp | TTTCCCTCTTCCCTTAACTTCCTGATAAGTTCTGTGTCGTTGTGGTaGGTTTTGATGAGTTCGGCTTTACCACTGGCAACAAGGGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPSSLNFLISSVSLW*VLMSSALPLATRDA Trigger: TGCGTCCCTTGTTGCCAGTGGTAAAGCCGAACTCATCAAAACCCACCACAACGACACAGAACTTATCAGGAAGTTAAGGGAAGAGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR CAA 90 bp | AAGGCCATACCAGGTCACAGATTGGAAGCATTAACAAGGCAGAGCACCGTTTCCATGCAGACTTGTAATTaGCATGAGCTTCTCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KAIPGHRLEALTRQSTVSMQTCN*HELLLV Trigger: GACCAGGAGAAGCTCATGCAAATTACAAGTCTGCAT...GGAAACGGTGCTCTGCCTTGTTAATGCTTCCAATCTGTGACCTGGTATGGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CCA 90 bp | ACTTTTCCCTCTTCCCTTAACTTCCTGATAAGTTCTGTGTCGTTGTaGTGGGTTTTGATGAGTTCGGCTTTACCACTGGCAACAAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TFPSSLNFLISSVSL*WVLMSSALPLATRD Trigger: GTCCCTTGTTGCCAGTGGTAAAGCCGAACTCATCAAAACCCACCACAACGACACAGAACTTATCAGGAAGTTAAGGGAAGAGGGAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR CAA 90 bp | CCAGACACACTAACGCTTCCTTCCATTTTAATCATCCTCAGCTCCACACTAAGCGAACGTGCTACAACCTaGAATCCATCAGCAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PDTLTLPSILIILSSTLSERATT*NPSATL Trigger: CAAAGTTGCTGATGGATTCAAGGTTGTAGCACGTTC...GCTTAGTGTGGAGCTGAGGATGATTAAAATGGAAGGAAGCGTTAGTGTGTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR CAA 90 bp | CCAGACACACTAACGCTTCCTTCCATTTTAATCATCCTCAGCTCCACACTAAGCGGCCTCTTCAACAGATaGGCTTTCTCGTTTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PDTLTLPSILIILSSTLSGLFNR*AFSFSH Trigger: ATGAGAAAACGAGAAAGCCAATCTGTTGAAGAGGCC...GCTTAGTGTGGAGCTGAGGATGATTAAAATGGAAGGAAGCGTTAGTGTGTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR CAA 90 bp | GCACTTGGGCAATGGTGCCATGATTATTTACCCAGACACACTAACGCTTCCTTCATAAGTTCTGTGTCGTaGTGGTGGGTTTTGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALGQWCHDYLPRHTNASFISSVS*WWVLMS Trigger: ACTCATCAAAACCCACCACAACGACACAGAACTTAT...GAAGGAAGCGTTAGTGTGTCTGGGTAAATAATCATGGCACCATTGCCCAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS GCA 90 bp | CTTGCCAATGGTAAATATTGCTGGATCAAACCAGGGAGCATCCTCTaGATACACAGAATTAGGTCCTCCAGATATGATAATAGCCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LANGKYCWIKPGSIL*IHRIRSSRYDNSPK Trigger: TTTCGGGCTATTATCATATCTGGAGGACCTAATTCTGTGTATGCAGAGGATGCTCCCTGGTTTGATCCAGCAATATTTACCATTGGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS GCA 90 bp | CTTTTTAGATTCATTGGCTATACCTGCCACAATGTTCCCAGAACGTaGTACAACCTTGAATCCATCAGCAACTTTGTCTACACTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFRFIGYTCHNVPRT*YNLESISNFVYTVS Trigger: GGAGACAGTGTAGACAAAGTTGCTGATGGATTCAAGGTTGTAGCACGTTCTGGGAACATTGTGGCAGGTATAGCCAATGAATCTAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR CAA 90 bp | GCACTTGGGCAATGGTGCCATGATTATTTACCCAGACACACTAACGCTTCCTTCTCTCCTCAGGACTTGTaGTCATATTTAATGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALGQWCHDYLPRHTNASFSPQDL*SYLMFC Trigger: GCAAAACATTAAATATGACAACAAGTCCTGAGGAGA...GAAGGAAGCGTTAGTGTGTCTGGGTAAATAATCATGGCACCATTGCCCAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR CAA 90 bp | AAACCAGACAACAGACTGCAACCTGGGGTAAAAGCAAGTGAGAGAAACATGGTATCTGTTGTGCAGGCTTaGACTCTTTGTAACAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KPDNRLQPGVKASERNMVSVVQA*TLCNSV Trigger: TACACTGTTACAAAGAGTCAAAGCCTGCACAACAGA...TACCATGTTTCTCTCACTTGCTTTTACCCCAGGTTGCAGTCTGTTGTCTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CCA 90 bp | TTCTTCAGTATTACCTTCCCATTTTCTGTAAGCCCAACTTCAGGGTaGAACTGTACACCGTATAGCTTTTTAGATTCATTGGCTATACCT | + |
|
Preference number: 5 (lower is better) Translates to: FFSITFPFSVSPTSG*NCTPYSFLDSLAIP Trigger: AGGTATAGCCAATGAATCTAAAAAGCTATACGGTGTACAGTTCCACCCTGAAGTTGGGCTTACAGAAAATGGGAAGGTAATACTGAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR CAA 90 bp | GAAATAGGAAGAAAGAGGGTAAATCAGTCCATGGGGGTATACAGATCTCAACATAGCTTTTTAGATTCATaGGCTATACCTGCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: EIGRKRVNQSMGVYRSQHSFLDS*AIPATM Trigger: CATTGTGGCAGGTATAGCCAATGAATCTAAAAAGCT...ATGTTGAGATCTGTATACCCCCATGGACTGATTTACCCTCTTTCTTCCTATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR CAA 90 bp | TCACGAACATTTTTCACAGTACTGCATACCATTAACAAGTGGTTTCTAATGAGCGTGTACAGCAATGACTaGATCTTGGTTCAAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SRTFFTVLHTINKWFLMSVYSND*ILVQST Trigger: CGTGCTTTGAACCAAGATCAAGTCATTGCTGTACAC...GCTCATTAGAAACCACTTGTTAATGGTATGCAGTACTGTGAAAAATGTTCGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS-3UTR CAA 90 bp | GAAAAATACATGATGAACTTGAGGATGAGCCACATAAATCCTGTTTCAAGGAGAAATCCATCAGCAACTTaGTCTACACTGTCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: EKYMMNLRMSHINPVSRRNPSAT*STLSPC Trigger: ACATGGAGACAGTGTAGACAAAGTTGCTGATGGATT...TCTCCTTGAAACAGGATTTATGTGGCTCATCCTCAAGTTCATCATGTATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS GCA 72 bp | CAAGGGACGCACTTTCGATTAGATCAGGCCGTAAAGTaGCTTGGGCGAGAAAAACCTCCTCGGGCTTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QGTHFRLDQAVK*LGREKPPRASD Trigger: GTCTGAAGCCCGAGGAGGTTTTTCTCGCCCAAGGCACTTTACGGCCTGATCTAATCGAAAGTGCGTCCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CCA 72 bp | AGCTCCCGCACTCTTCGGTCAATGACTTTCCCATACTaGGCTCCAGCATCCAGAATGACAACAGCTCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSRTLRSMTFPY*APASRMTTAPS Trigger: CGAAGGAGCTGTTGTCATTCTGGATGCTGGAGCCCAGTATGGGAAAGTCATTGACCGAAGAGTGCGGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS GCA 72 bp | GCGAAGGCTGGTGTTTCCAATGGGAAGATTTCAGACTaGACAAAGAGCTCCCGCACTCTTCGGTCAATGACT | + |
|
Preference number: 6 (lower is better) Translates to: AKAGVSNGKISD*TKSSRTLRSMT Trigger: AGTCATTGACCGAAGAGTGCGGGAGCTCTTTGTGCAGTCTGAAATCTTCCCATTGGAAACACCAGCCTTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CCA 72 bp | GACGCACTTTCGATTAGATCAGGCCGTAAAGTGCCTTaGGCGAGAAAAACCTCCTCGGGCTTCAGACTCATT | + |
|
Preference number: 6 (lower is better) Translates to: DALSIRSGRKVP*ARKTSSGFRLI Trigger: AATGAGTCTGAAGCCCGAGGAGGTTTTTCTCGCCCAAGGCACTTTACGGCCTGATCTAATCGAAAGTGCGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS GCA 72 bp | ATTACTCTGATTGCCAGGCCAGGACCTGGAAAAGGATaGCTGGAAACCAATTCTTCTGGCAGGTCAAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ITLIARPGPGKG*LETNSSGRSSS Trigger: AGAGCTTGACCTGCCAGAAGAATTGGTTTCCAGGCATCCTTTTCCAGGTCCTGGCCTGGCAATCAGAGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CCA 72 bp | TCCTTGTTCCTTTATGGCGAAGGCTGGTGTTTCCAATaGGAAGATTTCAGACTGCACAAAGAGCTCCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLFLYGEGWCFQ*EDFRLHKELPH Trigger: GTGCGGGAGCTCTTTGTGCAGTCTGAAATCTTCCCATTGGAAACACCAGCCTTCGCCATAAAGGAACAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CAA 90 bp | TCTTCCCTTAACTTCCTGATAAGTTCTGTGTCGTTGTGGTGGGTTTaGATGAGTTCGGCTTTACCACTGGCAACAAGGGACGCACTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSLNFLISSVSLWWV*MSSALPLATRDALS Trigger: CGAAAGTGCGTCCCTTGTTGCCAGTGGTAAAGCCGAACTCATCAAAACCCACCACAACGACACAGAACTTATCAGGAAGTTAAGGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CAA 72 bp | AACTTCCTGATAAGTTCTGTGTCGTTGTGGTGGGTTTaGATGAGTTCGGCTTTACCACTGGCAACAAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: NFLISSVSLWWV*MSSALPLATRD Trigger: GTCCCTTGTTGCCAGTGGTAAAGCCGAACTCATCAAAACCCACCACAACGACACAGAACTTATCAGGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CAA 72 bp | CCCTCTTCCCTTAACTTCCTGATAAGTTCTGTGTCGTaGTGGTGGGTTTTGATGAGTTCGGCTTTACCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PSSLNFLISSVS*WWVLMSSALPL Trigger: CAGTGGTAAAGCCGAACTCATCAAAACCCACCACAACGACACAGAACTTATCAGGAAGTTAAGGGAAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS TCA 72 bp | TACCTGCCACAATGTTCCCAGAACGTGCTACAACCTTaGATCCATCAGCAACTTTGTCTACACTGTCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: YLPQCSQNVLQP*IHQQLCLHCLH Trigger: ATGGAGACAGTGTAGACAAAGTTGCTGATGGATTCAAGGTTGTAGCACGTTCTGGGAACATTGTGGCAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CCA 72 bp | TCCCTTAACTTCCTGATAAGTTCTGTGTCGTTGTGGTaGGTTTTGATGAGTTCGGCTTTACCACTGGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: SLNFLISSVSLW*VLMSSALPLAT Trigger: TGTTGCCAGTGGTAAAGCCGAACTCATCAAAACCCACCACAACGACACAGAACTTATCAGGAAGTTAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CCA 72 bp | TCTTCCCTTAACTTCCTGATAAGTTCTGTGTCGTTGTaGTGGGTTTTGATGAGTTCGGCTTTACCACTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLNFLISSVSL*WVLMSSALPLA Trigger: TGCCAGTGGTAAAGCCGAACTCATCAAAACCCACCACAACGACACAGAACTTATCAGGAAGTTAAGGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CAA 72 bp | ATACCTGCCACAATGTTCCCAGAACGTGCTACAACCTaGAATCCATCAGCAACTTTGTCTACACTGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IPATMFPERATT*NPSATLSTLSP Trigger: TGGAGACAGTGTAGACAAAGTTGCTGATGGATTCAAGGTTGTAGCACGTTCTGGGAACATTGTGGCAGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CAA 72 bp | GGGTGGAACTGTACACCGTATAGCTTTTTAGATTCATaGGCTATACCTGCCACAATGTTCCCAGAACGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GWNCTPYSFLDS*AIPATMFPERA Trigger: AGCACGTTCTGGGAACATTGTGGCAGGTATAGCCAATGAATCTAAAAAGCTATACGGTGTACAGTTCCACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CAA 90 bp | TCATTGGCTATACCTGCCACAATGTTCCCAGAACGTGCTACAACCTaGAATCCATCAGCAACTTTGTCTACACTGTCTCCATGTGTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLAIPATMFPERATT*NPSATLSTLSPCVS Trigger: ACTTACACATGGAGACAGTGTAGACAAAGTTGCTGATGGATTCAAGGTTGTAGCACGTTCTGGGAACATTGTGGCAGGTATAGCCAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CAA 90 bp | ATTACTTTTCCCTCTTCCCTTAACTTCCTGATAAGTTCTGTGTCGTaGTGGTGGGTTTTGATGAGTTCGGCTTTACCACTGGCAACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ITFPSSLNFLISSVS*WWVLMSSALPLATR Trigger: CCTTGTTGCCAGTGGTAAAGCCGAACTCATCAAAACCCACCACAACGACACAGAACTTATCAGGAAGTTAAGGGAAGAGGGAAAAGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS GCA 72 bp | TTCATTGGCTATACCTGCCACAATGTTCCCAGAACGTaGTACAACCTTGAATCCATCAGCAACTTTGTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: FIGYTCHNVPRT*YNLESISNFVY Trigger: GTAGACAAAGTTGCTGATGGATTCAAGGTTGTAGCACGTTCTGGGAACATTGTGGCAGGTATAGCCAATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS GCA 72 bp | TCTTTAATCTCTCGAATGCATTCAAGTTCTCGGTTCTaGACAGTAAAGTTCCCACTGCATCCAGCTATATCA | + |
|
Preference number: 6 (lower is better) Translates to: SLISRMHSSSRF*TVKFPLHPAIS Trigger: TGATATAGCTGGATGCAGTGGGAACTTTACTGTGCAGAACCGAGAACTTGAATGCATTCGAGAGATTAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS CCA 72 bp | ATTACCTTCCCATTTTCTGTAAGCCCAACTTCAGGGTaGAACTGTACACCGTATAGCTTTTTAGATTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: ITFPFSVSPTSG*NCTPYSFLDSL Trigger: CAATGAATCTAAAAAGCTATACGGTGTACAGTTCCACCCTGAAGTTGGGCTTACAGAAAATGGGAAGGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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| CDS TCA 72 bp | GCAAAGCTGTACAAACAGTTGAATCTACACCACCACTaGGTAAAACCAACACTTTTGATGTTCCTACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AKLYKQLNLHHH*VKPTLLMFLLS Trigger: AGAAAGTAGGAACATCAAAAGTGTTGGTTTTACTCAGTGGTGGTGTAGATTCAACTGTTTGTACAGCTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
||
| CDS CAA 72 bp | TCCTCGGGCTTCAGACTCATTTCTCCAATTACTTCATaGGCAATCTTAACGAAAGTATCACCAATAATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSGFRLISPITS*AILTKVSPIIF Trigger: AAAAATTATTGGTGATACTTTCGTTAAGATTGCCAATGAAGTAATTGGAGAAATGAGTCTGAAGCCCGAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029405.8 |
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