Pregenerated sensors for GMPR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002326Ensembl transcript IDs: ENSMUST00000002397.7, ENSMUST00000227178.2, ENSMUST00000227914.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCCGCAGCCTTCCCTTTCCAGACCAAGGGCTGCCATTTCTGTGTaGATTAGCATCTTCCTAATCTTCGGGGGCTGTCCCCAGGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: FPQPSLSRPRAAISV*ISIFLIFGGCPQGL Trigger: GAGACCCTGGGGACAGCCCCCGAAGATTAGGAAGATGCTAATCCACACAGAAATGGCAGCCCTTGGTCTGGAAAGGGAAGGCTGCGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR GCA 90 bp | CTTTGTAAACTTGCTTGCTACCAAGTTAGCTTAGGCTGGCGTCGCTaGTTCCTGAGAATAACATTCATTTCCCTGGATCCTACTGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LCKLACYQVSLGWRR*FLRITFISLDPTGS Trigger: TGACCCAGTAGGATCCAGGGAAATGAATGTTATTCTCAGGAAGCAGCGACGCCAGCCTAAGCTAACTTGGTAGCAAGCAAGTTTACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR CCA 90 bp | CAGAATACACTTTGTAAACTTGCTTGCTACCAAGTTAGCTTAGGCTaGCGTCGCTGCTTCCTGAGAATAACATTCATTTCCCTGGATCCT | + |
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Preference number: 1 (lower is better) Translates to: QNTLCKLACYQVSLG*RRCFLRITFISLDP Trigger: AGGATCCAGGGAAATGAATGTTATTCTCAGGAAGCAGCGACGCCAGCCTAAGCTAACTTGGTAGCAAGCAAGTTTACAAAGTGTATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGGTCGGGAGGCTCCAGTaGCAGTGCTGCTGCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: AGTELGSHHHRGCSGRGTVGRLQ*QCCCLR Trigger: CCTGAGGCAGCAGCACTGCCACTGGAGCCTCCCGAC...CGTGCCTCTCCCACTGCAGCCCCTGTGGTGGTGGCTGCCTAATTCAGTTCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTTATGCCATCCTAACAGTCATCCCTAAGGCCAGAATACACTTTGTAAACCACCACCACAGGGGCTaGAGTGGGAGAGGCACGCCC | + |
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Preference number: 2 (lower is better) Translates to: CPYAILTVIPKARIHFVNHHHRG*SGRGTP Trigger: GGGCGTGCCTCTCCCACTGCAGCCCCTGTGGTGGTG...GTTTACAAAGTGTATTCTGGCCTTAGGGATGACTGTTAGGATGGCATAAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCTGGAAGGGAAACTGTCAGTGGCAGTGCTGCTaGCTCAGGAAAGTAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GKSLDLHRRVERAWKGNCQWQCC*LRKVGF Trigger: GAAGCCTACTTTCCTGAGGCAGCAGCACTGCCACTG...ACAGTTTCCCTTCCAGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR-3UTR TCA 90 bp | AGTTTAGATTTACATAGAAGGGTTGAGAGAGCCTGGAAGGGAAACTGTCCTTATAGTGAGAGCTGGAACTaGATTAGGCAGCCACCACCA | + |
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Preference number: 2 (lower is better) Translates to: SLDLHRRVERAWKGNCPYSESWN*IRQPPP Trigger: TGGTGGTGGCTGCCTAATTCAGTTCCAGCTCTCACT...ATAAGGACAGTTTCCCTTCCAGGCTCTCTCAACCCTTCTATGTAAATCTAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCTGGAAGGGAAACTGTGCTGCCATTTCTGTGTaGATTAGCATCTTCCTAATC | + |
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Preference number: 2 (lower is better) Translates to: GKSLDLHRRVERAWKGNCAAISV*ISIFLI Trigger: GATTAGGAAGATGCTAATCCACACAGAAATGGCAGC...ACAGTTTCCCTTCCAGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR-3UTR TCA 90 bp | GGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCTGGAAGGGAAACTGTCAGCATCCATCTGTATaGGAGTGTTTCAAGTATAGA | + |
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Preference number: 2 (lower is better) Translates to: GKSLDLHRRVERAWKGNCQHPSV*ECFKYR Trigger: TCTATACTTGAAACACTCTCATACAGATGGATGCTG...ACAGTTTCCCTTCCAGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR CCA 72 bp | GCAGTGGGAGAGGCACGCCCTGTCGGGAGGCTCCAGTaGCAGTGCTGCTGCCTCAGGAAAGTAGGCTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: AVGEARPVGRLQ*QCCCLRKVGFL Trigger: CAAGAAGCCTACTTTCCTGAGGCAGCAGCACTGCCACTGGAGCCTCCCGACAGGGCGTGCCTCTCCCACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR TCA 72 bp | CTAATCTTCGGGGGCTGTCCCCAGGGTCTCATTTGTTaGTCTCACGTCTCCTTCCTCGCCTCTCCCGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: LIFGGCPQGLIC*SHVSFLASPVV Trigger: CACTACGGGAGAGGCGAGGAAGGAGACGTGAGATCAACAAATGAGACCCTGGGGACAGCCCCCGAAGATTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR GCA 72 bp | ACTGGGTCAGGGTCAATCCCAGGAGGAGCATCTAGATaGCAGCCTGTGCTGGAAGCCCAGCATCCATCTGTA | + |
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Preference number: 3 (lower is better) Translates to: TGSGSIPGGASR*QPVLEAQHPSV Trigger: TACAGATGGATGCTGGGCTTCCAGCACAGGCTGGCATCTAGATGCTCCTCCTGGGATTGACCCTGACCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR GCA 72 bp | GGTCAATCCCAGGAGGAGCATCTAGATGCCAGCCTGTaGTGGAAGCCCAGCATCCATCTGTATGAGAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: GQSQEEHLDASL*WKPSIHLYESV Trigger: AACACTCTCATACAGATGGATGCTGGGCTTCCAGCACAGGCTGGCATCTAGATGCTCCTCCTGGGATTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR CCA 72 bp | CCTTCCCTTTCCAGACCAAGGGCTGCCATTTCTGTGTaGATTAGCATCTTCCTAATCTTCGGGGGCTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: PSLSRPRAAISV*ISIFLIFGGCP Trigger: GGGACAGCCCCCGAAGATTAGGAAGATGCTAATCCACACAGAAATGGCAGCCCTTGGTCTGGAAAGGGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR CCA 72 bp | CAATCCCAGGAGGAGCATCTAGATGCCAGCCTGTGCTaGAAGCCCAGCATCCATCTGTATGAGAGTGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: QSQEEHLDASLC*KPSIHLYESVS Trigger: TGAAACACTCTCATACAGATGGATGCTGGGCTTCCAGCACAGGCTGGCATCTAGATGCTCCTCCTGGGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR GCA 72 bp | CTTGCTTGCTACCAAGTTAGCTTAGGCTGGCGTCGCTaGTTCCTGAGAATAACATTCATTTCCCTGGATCCT | + |
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Preference number: 3 (lower is better) Translates to: LACYQVSLGWRR*FLRITFISLDP Trigger: AGGATCCAGGGAAATGAATGTTATTCTCAGGAAGCAGCGACGCCAGCCTAAGCTAACTTGGTAGCAAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR CCA 72 bp | CTTTGTAAACTTGCTTGCTACCAAGTTAGCTTAGGCTaGCGTCGCTGCTTCCTGAGAATAACATTCATTTCC | + |
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Preference number: 3 (lower is better) Translates to: LCKLACYQVSLG*RRCFLRITFIS Trigger: GGAAATGAATGTTATTCTCAGGAAGCAGCGACGCCAGCCTAAGCTAACTTGGTAGCAAGCAAGTTTACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR CCA 72 bp | AAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCTaGAAGGGAAACTGTCCTTATGCCATCCTAACAGTC | + |
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Preference number: 3 (lower is better) Translates to: KSLDLHRRVERA*KGNCPYAILTV Trigger: GACTGTTAGGATGGCATAAGGACAGTTTCCCTTCCAGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR TCA 90 bp | TGTCGGGAGGCTCCAGTGGCAGTGCTGCTGCCTCAGGAAAGTAGGCTTCTTGGGAATGAGTTCGCCACCTaGTTCACTGTGCCCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CREAPVAVLLPQESRLLGNEFAT*FTVPGQ Trigger: CTGGCCGGGCACAGTGAATCAGGTGGCGAACTCATT...CCCAAGAAGCCTACTTTCCTGAGGCAGCAGCACTGCCACTGGAGCCTCCCGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR TCA 90 bp | GCTGGAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGTGCCATCTCTCTCAATaGGTTCGCCACCTGATTCAC | + |
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Preference number: 4 (lower is better) Translates to: AGTELGSHHHRGCSGRGTCHLSQ*VRHLIH Trigger: GTGAATCAGGTGGCGAACTCATTGAGAGAGATGGCA...CGTGCCTCTCCCACTGCAGCCCCTGTGGTGGTGGCTGCCTAATTCAGTTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR TCA 90 bp | CTACTGGGTCAGGGTCAATCCCAGGAGGAGCATCTAGATGCCAGCCTGTGCTGGTACTATCTTTCCCTCTaGGGCCCTGTACTCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLGQGQSQEEHLDASLCWYYLSL*GPVLSH Trigger: GTGGCTGAGTACAGGGCCTCAGAGGGAAAGATAGTA...CCAGCACAGGCTGGCATCTAGATGCTCCTCCTGGGATTGACCCTGACCCAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CCA 90 bp | CTACTGGGTCAGGGTCAATCCCAGGAGGAGCATCTAGATGCCAGCCTGTGCTGGGCCATGATGGTGTGTTaGGGGAATCGCTTCCGTACA | + |
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Preference number: 4 (lower is better) Translates to: LLGQGQSQEEHLDASLCWAMMVC*GNRFRT Trigger: TGTACGGAAGCGATTCCCCCAACACACCATCATGGC...CCAGCACAGGCTGGCATCTAGATGCTCCTCCTGGGATTGACCCTGACCCAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR CAA 72 bp | CCTAATCTTCGGGGGCTGTCCCCAGGGTCTCATTTGTaGATCTCACGTCTCCTTCCTCGCCTCTCCCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PNLRGLSPGSHL*ISRLLPRLSRS Trigger: ACTACGGGAGAGGCGAGGAAGGAGACGTGAGATCAACAAATGAGACCCTGGGGACAGCCCCCGAAGATTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| 3UTR CAA 72 bp | CTTCCTAATCTTCGGGGGCTGTCCCCAGGGTCTCATTaGTTGATCTCACGTCTCCTTCCTCGCCTCTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LPNLRGLSPGSH*LISRLLPRLSR Trigger: ACGGGAGAGGCGAGGAAGGAGACGTGAGATCAACAAATGAGACCCTGGGGACAGCCCCCGAAGATTAGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR TCA 90 bp | GCTGTCCCCAGGGTCTCATTTGTTGATCTCACGTCTCCTTCCTCGCCTCTCCCGGTTCCGGAACGAAAATaGTCTTGTGAGCTCTACCTC | + |
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Preference number: 4 (lower is better) Translates to: AVPRVSFVDLTSPSSPLPVPERK*SCELYL Trigger: GAGGTAGAGCTCACAAGATCATTTTCGTTCCGGAAC...CGGGAGAGGCGAGGAAGGAGACGTGAGATCAACAAATGAGACCCTGGGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR GCA 90 bp | GTGCAGCTAGAGGCATGGGTGAGTAGAGTGAGAGCTGGAACTGAATTAGGCAGCCACAAAGTCAGCCCCTaGCCCAAAAGCCTTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VQLEAWVSRVRAGTELGSHKVSP*PKSLCH Trigger: GTGGCAAAGGCTTTTGGGGCAGGGGCTGACTTTGTG...GCTGCCTAATTCAGTTCCAGCTCTCACTCTACTCACCCATGCCTCTAGCTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CCA 90 bp | GTGCAGCTAGAGGCATGGGTGAGTAGAGTGAGAGCTGGAACTGAATTAGGCAGCAGCCTGAGCCTGAGCTaGCAGCTAGACACTCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: VQLEAWVSRVRAGTELGSSLSLS*QLDTQD Trigger: GTCTTGAGTGTCTAGCTGCCAGCTCAGGCTCAGGCT...GCTGCCTAATTCAGTTCCAGCTCTCACTCTACTCACCCATGCCTCTAGCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CCA 90 bp | CAATCCCAGGAGGAGCATCTAGATGCCAGCCTGTGCTGGAAGCCCAGCATCCATCACTGCACTGAGCTGTaGATACCCCACTCCAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: QSQEEHLDASLCWKPSIHHCTEL*IPHSSF Trigger: AAAACTGGAGTGGGGTATCCACAGCTCAGTGCAGTG...ATGGATGCTGGGCTTCCAGCACAGGCTGGCATCTAGATGCTCCTCCTGGGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR GCA 90 bp | AGCCTGTGCTGGAAGCCCAGCATCCATCTGTATGAGAGTGTTTCAAGTATAGAACCACCTGATTCACTGTaGCCGGCCAGCATGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: SLCWKPSIHLYESVSSIEPPDSL*PASMPP Trigger: GGGTGGCATGCTGGCCGGGCACAGTGAATCAGGTGG...TTCTATACTTGAAACACTCTCATACAGATGGATGCTGGGCTTCCAGCACAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CCA 90 bp | GCTGGAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGATTGGATTCACTTGCTaGGTGACTCGGATAAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: AGTELGSHHHRGCSGRGTIGFTC*VTRIKV Trigger: TACTTTTATCCGAGTCACCCAGCAAGTGAATCCAAT...CGTGCCTCTCCCACTGCAGCCCCTGTGGTGGTGGCTGCCTAATTCAGTTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR GCA 90 bp | GCTGTCCCCAGGGTCTCATTTGTTGATCTCACGTCTCCTTCCTCGCCTCTCCCGAAGATTGGATTCACTTaGTGGGTGACTCGGATAAAA | + |
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Preference number: 4 (lower is better) Translates to: AVPRVSFVDLTSPSSPLPKIGFT*WVTRIK Trigger: TTTTATCCGAGTCACCCAGCAAGTGAATCCAATCTT...CGGGAGAGGCGAGGAAGGAGACGTGAGATCAACAAATGAGACCCTGGGGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CCA 90 bp | TGTCGGGAGGCTCCAGTGGCAGTGCTGCTGCCTCAGGAAAGTAGGCTTCTTGGGCATATATATTTGACTTaGGGAATAGCTTCCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: CREAPVAVLLPQESRLLGHIYLT*GIASRI Trigger: GATCCTGGAAGCTATTCCCCAAGTCAAATATATATG...CCCAAGAAGCCTACTTTCCTGAGGCAGCAGCACTGCCACTGGAGCCTCCCGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CCA 90 bp | CAGGAGGAGCATCTAGATGCCAGCCTGTGCTGGAAGCCCAGCATCCATCTGTATGGAATTGCTGAAGATTaGATTCACTTGCTGGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: QEEHLDASLCWKPSIHLYGIAED*IHLLGD Trigger: GTCACCCAGCAAGTGAATCCAATCTTCAGCAATTCC...ATACAGATGGATGCTGGGCTTCCAGCACAGGCTGGCATCTAGATGCTCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR TCA 90 bp | TGCTGGAAGCCCAGCATCCATCTGTATGAGAGTGTTTCAAGTATAGAAGAACGTTGGCCTTTGAGGCCATaGGCAGCATCTGCACACTCC | + |
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Preference number: 4 (lower is better) Translates to: CWKPSIHLYESVSSIEERWPLRP*AASAHS Trigger: GGAGTGTGCAGATGCTGCTCATGGCCTCAAAGGCCA...ACGTTCTTCTATACTTGAAACACTCTCATACAGATGGATGCTGGGCTTCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR TCA 90 bp | TGTCCTTATGCCATCCTAACAGTCATCCCTAAGGCCAGAATACACTTTGTAAACACTCCATCACTGCACTaGGCTGTGGATACCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: CPYAILTVIPKARIHFVNTPSLH*AVDTPL Trigger: GAGTGGGGTATCCACAGCTCAGTGCAGTGATGGAGT...GTTTACAAAGTGTATTCTGGCCTTAGGGATGACTGTTAGGATGGCATAAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR GCA 90 bp | GGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCTGGAAGGGAAACTGTGCCATGAGCAGCATCTaGACACTCCATCACTGCACT | + |
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Preference number: 4 (lower is better) Translates to: GKSLDLHRRVERAWKGNCAMSSI*TLHHCT Trigger: AGTGCAGTGATGGAGTGTGCAGATGCTGCTCATGGC...ACAGTTTCCCTTCCAGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR TCA 90 bp | TGTCCTTATGCCATCCTAACAGTCATCCCTAAGGCCAGAATACACTTTGTAAACCCACATTTCCTGCCATaGTGGTGTGTTGGGGGAATC | + |
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Preference number: 4 (lower is better) Translates to: CPYAILTVIPKARIHFVNPHFLP*WCVGGI Trigger: GATTCCCCCAACACACCATCATGGCAGGAAATGTGG...GTTTACAAAGTGTATTCTGGCCTTAGGGATGACTGTTAGGATGGCATAAGGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR TCA 90 bp | TTTGGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCTGGAAGGGAAACCTCAGCCACACCTCCTaGGTACTTCTTCATGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: FGKSLDLHRRVERAWKGNLSHTS*VLLHGH Trigger: ATGGCCATGAAGAAGTACTCAGGAGGTGTGGCTGAG...GTTTCCCTTCCAGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTGCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR GCA 90 bp | AGTTTAGATTTACATAGAAGGGTTGAGAGAGCCTGGAAGGGAAACTGTCCTTATAGGATCTGTTCCAGCTaGTCAAAGTCAGCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLDLHRRVERAWKGNCPYRICSS*SKSAEP Trigger: AGGCTCTGCTGACTTTGAGCAGCTGGAACAGATCCT...ATAAGGACAGTTTCCCTTCCAGGCTCTCTCAACCCTTCTATGTAAATCTAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR GCA 90 bp | TGTCCTTATGCCATCCTAACAGTCATCCCTAAGGCCAGAATACACTTTGTAAACTGTTACCACATTTCCTaGCATGATGGTGTGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: CPYAILTVIPKARIHFVNCYHIS*HDGVLG Trigger: CCCCAACACACCATCATGGCAGGAAATGTGGTAACA...GTTTACAAAGTGTATTCTGGCCTTAGGGATGACTGTTAGGATGGCATAAGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CCA 90 bp | AGTTTAGATTTACATAGAAGGGTTGAGAGAGCCTGGAAGGGAAACTGTCCTTATAGACAGTCAGGATTCTaGCTAGCAAACTCTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLDLHRRVERAWKGNCPYRQSGF*LANSCH Trigger: GTGGCAAGAGTTTGCTAGCCAGAATCCTGACTGTCT...ATAAGGACAGTTTCCCTTCCAGGCTCTCTCAACCCTTCTATGTAAATCTAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CAA 90 bp | TGTCGGGAGGCTCCAGTGGCAGTGCTGCTGCCTCAGGAAAGTAGGCTTCTTGGGCCCACGGTATCCATATaGGCAGCAATGACAGGGATG | + |
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Preference number: 5 (lower is better) Translates to: CREAPVAVLLPQESRLLGPTVSI*AAMTGM Trigger: CATCCCTGTCATTGCTGCCAATATGGATACCGTGGG...CCCAAGAAGCCTACTTTCCTGAGGCAGCAGCACTGCCACTGGAGCCTCCCGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CAA 90 bp | GCTGTCCCCAGGGTCTCATTTGTTGATCTCACGTCTCCTTCCTCGCCTCTCCCGCAGTTTTCTTCCGAGTaGTACAGACAGAGCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: AVPRVSFVDLTSPSSPLPQFSSE*YRQSQD Trigger: GTCCTGGCTCTGTCTGTACAACTCGGAAGAAAACTG...CGGGAGAGGCGAGGAAGGAGACGTGAGATCAACAAATGAGACCCTGGGGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS GCA 90 bp | TATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTGATTCACTGTaGCCGGCCAGCATGCCACCCAACATCACAAAGTCAGCCCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: YFLPSLSMSSPPDSL*PASMPPNITKSAPA Trigger: GGCAGGGGCTGACTTTGTGATGTTGGGTGGCATGCTGGCCGGGCACAGTGAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CAA 90 bp | CAATCCCAGGAGGAGCATCTAGATGCCAGCCTGTGCTGGAAGCCCAGCATCCATCTGGCTAGCAAACTCTaGCCACTGATGGATGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: QSQEEHLDASLCWKPSIHLASKL*PLMDAV Trigger: TACAGCATCCATCAGTGGCAAGAGTTTGCTAGCCAG...ATGGATGCTGGGCTTCCAGCACAGGCTGGCATCTAGATGCTCCTCCTGGGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CAA 90 bp | ACTGGGTCAGGGTCAATCCCAGGAGGAGCATCTAGATGCCAGCCTGTGCTGGAAGAAGATTGGATTCACTaGCTGGGTGACTCGGATAAA | + |
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Preference number: 5 (lower is better) Translates to: TGSGSIPGGASRCQPVLEEDWIH*LGDSDK Trigger: TTTATCCGAGTCACCCAGCAAGTGAATCCAATCTTC...TTCCAGCACAGGCTGGCATCTAGATGCTCCTCCTGGGATTGACCCTGACCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CAA 90 bp | GCTGTCCCCAGGGTCTCATTTGTTGATCTCACGTCTCCTTCCTCGCCTCTCCCGGCATATATATTTGACTaGGGGAATAGCTTCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: AVPRVSFVDLTSPSSPLPAYIFD*GNSFQD Trigger: ATCCTGGAAGCTATTCCCCAAGTCAAATATATATGC...CGGGAGAGGCGAGGAAGGAGACGTGAGATCAACAAATGAGACCCTGGGGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CAA 90 bp | CGTCGCTGCTTCCTGAGAATAACATTCATTTCCCTGGATCCTACTGGGTCAGGGGGACCAATTCCCACTTaGATGATGTCAGCCCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RRCFLRITFISLDPTGSGGPIPT*MMSAPE Trigger: TTCTGGGGCTGACATCATCAAAGTGGGAATTGGTCC...CCCTGACCCAGTAGGATCCAGGGAAATGAATGTTATTCTCAGGAAGCAGCGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS TCA 90 bp | GAAGAGCTTATATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTaGTTCACTGTGCCCGGCCAGCATGCCACCCAACATCACAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: EELIFLAISLNEFAT*FTVPGQHATQHHKV Trigger: GACTTTGTGATGTTGGGTGGCATGCTGGCCGGGCACAGTGAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS TCA 90 bp | AACTCATTCCGTAGAAGAGCTTATATTTCTTGCCATCTCTCTCAATaGGTTCGCCACCTGATTCACTGTGCCCGGCCAGCATGCCACCCA | + |
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Preference number: 5 (lower is better) Translates to: NSFRRRAYISCHLSQ*VRHLIHCARPACHP Trigger: TGGGTGGCATGCTGGCCGGGCACAGTGAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCTTCTACGGAATGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS GCA 90 bp | CATATATATTTGACTTGGGGAATAGCTTCCAGGATCTGTTCCAGCTaGTCAAAGTCAGCAGAGCCTGAGCCTGAGCTGGCAGCTAGACAC | + |
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Preference number: 5 (lower is better) Translates to: HIYLTWGIASRICSS*SKSAEPEPELAARH Trigger: GTGTCTAGCTGCCAGCTCAGGCTCAGGCTCTGCTGACTTTGAGCAGCTGGAACAGATCCTGGAAGCTATTCCCCAAGTCAAATATATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002397.7 ENSMUST00000227914.2 |
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| CDS-3UTR CAA 90 bp | GGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCTGGAAGGGAAACTGTTGCCATGATGGTGTGTaGGGGGAATCGCTTCCGTAC | + |
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Preference number: 5 (lower is better) Translates to: GKSLDLHRRVERAWKGNCCHDGV*GESLPY Trigger: GTACGGAAGCGATTCCCCCAACACACCATCATGGCA...ACAGTTTCCCTTCCAGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS-3UTR CAA 90 bp | CGTCGCTGCTTCCTGAGAATAACATTCATTTCCCTGGATCCTACTGGGTCAGGGCTCAACAGGACATCCTaGAAGTCAAGTTTCACATCA | + |
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Preference number: 5 (lower is better) Translates to: RRCFLRITFISLDPTGSGLNRTS*KSSFTS Trigger: TGATGTGAAACTTGACTTCAAGGATGTCCTGTTGAG...CCCTGACCCAGTAGGATCCAGGGAAATGAATGTTATTCTCAGGAAGCAGCGACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS GCA 90 bp | ACGGTATCCATATTGGCAGCAATGACAGGGATGCCACTGTACATCTaGTTTGAGTTCCGGAACGAAAATGATCTTGTGAGCTCTACCTCA | + |
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Preference number: 5 (lower is better) Translates to: TVSILAAMTGMPLYI*FEFRNENDLVSSTS Trigger: TGAGGTAGAGCTCACAAGATCATTTTCGTTCCGGAACTCAAAGCAGATGTACAGTGGCATCCCTGTCATTGCTGCCAATATGGATACCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002397.7 ENSMUST00000227178.2 ENSMUST00000227914.2 |
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| CDS-3UTR CAA 90 bp | AGCCTGTGCTGGAAGCCCAGCATCCATCTGTATGAGAGTGTTTCAAGTATAGAAAAGAGCTTATATTTCTaGCCATCTCTCTCAATGAGT | + |
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Preference number: 5 (lower is better) Translates to: SLCWKPSIHLYESVSSIEKSLYF*PSLSMS Trigger: ACTCATTGAGAGAGATGGCAAGAAATATAAGCTCTT...TTCTATACTTGAAACACTCTCATACAGATGGATGCTGGGCTTCCAGCACAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS GCA 72 bp | CCATCTCTCTCAATGAGTTCGCCACCTGATTCACTGTaGCCGGCCAGCATGCCACCCAACATCACAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSLSMSSPPDSL*PASMPPNITKS Trigger: TGACTTTGTGATGTTGGGTGGCATGCTGGCCGGGCACAGTGAATCAGGTGGCGAACTCATTGAGAGAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS TCA 72 bp | ATATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTaGTTCACTGTGCCCGGCCAGCATGCCACCCAACAT | + |
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Preference number: 6 (lower is better) Translates to: IFLAISLNEFAT*FTVPGQHATQH Trigger: ATGTTGGGTGGCATGCTGGCCGGGCACAGTGAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS TCA 72 bp | CGTAGAAGAGCTTATATTTCTTGCCATCTCTCTCAATaGGTTCGCCACCTGATTCACTGTGCCCGGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RRRAYISCHLSQ*VRHLIHCARPA Trigger: TGCTGGCCGGGCACAGTGAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCTTCTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002397.7 |
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| CDS CAA 72 bp | AGCTCTACCTCACTTCGAGACTTAAGAGTGCTGCGTTaGGGCCTCAACAGGACATCCTTGAAGTCAAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SSTSLRDLRVLR*GLNRTSLKSSF Trigger: GAAACTTGACTTCAAGGATGTCCTGTTGAGGCCCAAACGCAGCACTCTTAAGTCTCGAAGTGAGGTAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002397.7 ENSMUST00000227178.2 ENSMUST00000227914.2 |
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| CDS CAA 72 bp | ACACTCAAGACAGTCAGGATTCTGGCTAGCAAACTCTaGCCACTGATGGATGCTGTAGTGCTTATGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: TLKTVRILASKL*PLMDAVVLMDG Trigger: GCCATCCATAAGCACTACAGCATCCATCAGTGGCAAGAGTTTGCTAGCCAGAATCCTGACTGTCTTGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002397.7 ENSMUST00000227914.2 |
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| CDS CAA 90 bp | TTACAGAGAACCCTAGCCATTTCAAAAGTGCCCACGGTATCCATATaGGCAGCAATGACAGGGATGCCACTGTACATCTGCTTTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LQRTLAISKVPTVSI*AAMTGMPLYICFEF Trigger: GAACTCAAAGCAGATGTACAGTGGCATCCCTGTCATTGCTGCCAATATGGATACCGTGGGCACTTTTGAAATGGCTAGGGTTCTCTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002397.7 ENSMUST00000227178.2 ENSMUST00000227914.2 |
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| CDS TCA 72 bp | TTTCAAAAGTGCCCACGGTATCCATATTGGCAGCAATaGCAGGGATGCCACTGTACATCTGCTTTGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FQKCPRYPYWQQ*QGCHCTSALSS Trigger: GGAACTCAAAGCAGATGTACAGTGGCATCCCTGTCATTGCTGCCAATATGGATACCGTGGGCACTTTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002397.7 ENSMUST00000227178.2 ENSMUST00000227914.2 |
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| CDS CAA 72 bp | CTCTCCTGTTACCACATTTCCTGCCATGATGGTGTGTaGGGGGAATCGCTTCCGTACATCCTTTACAAATTC | + |
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Preference number: 6 (lower is better) Translates to: LSCYHISCHDGV*GESLPYILYKF Trigger: GAATTTGTAAAGGATGTACGGAAGCGATTCCCCCAACACACCATCATGGCAGGAAATGTGGTAACAGGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002397.7 ENSMUST00000227914.2 |
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| CDS CAA 72 bp | CGAGTTGTACAGACAGAGCCAGGACCAATTCCCACTTaGATGATGTCAGCCCCAGAAAGGATTAACTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RVVQTEPGPIPT*MMSAPERINSS Trigger: AGAAGAGTTAATCCTTTCTGGGGCTGACATCATCAAAGTGGGAATTGGTCCTGGCTCTGTCTGTACAACTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002397.7 ENSMUST00000227914.2 |
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| CDS GCA 72 bp | ATATTGGCAGCAATGACAGGGATGCCACTGTACATCTaGTTTGAGTTCCGGAACGAAAATGATCTTGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ILAAMTGMPLYI*FEFRNENDLVS Trigger: GCTCACAAGATCATTTTCGTTCCGGAACTCAAAGCAGATGTACAGTGGCATCCCTGTCATTGCTGCCAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002397.7 ENSMUST00000227178.2 ENSMUST00000227914.2 |
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| CDS CCA 72 bp | TCTCCTGTTACCACATTTCCTGCCATGATGGTGTGTTaGGGGAATCGCTTCCGTACATCCTTTACAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: SPVTTFPAMMVC*GNRFRTSFTNS Trigger: TGAATTTGTAAAGGATGTACGGAAGCGATTCCCCCAACACACCATCATGGCAGGAAATGTGGTAACAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002397.7 ENSMUST00000227914.2 |
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