Pregenerated sensors for GMPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000253Ensembl transcript IDs: ENSMUST00000000260.13, ENSMUST00000128873.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | TTTAGAAAGAAAACTAACGGCGGACAGAAAGGAGGGTaGAAGGGCTGGTTGACACCAGGAGGCGATGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: FRKKTNGGQKGG*KGWLTPGGDEF Trigger: GAACTCATCGCCTCCTGGTGTCAACCAGCCCTTGCACCCTCCTTTCTGTCCGCCGTTAGTTTTCTTTCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR CCA 90 bp | GGGCCCCACGAGCGCCCTGCTCCTGGGCCCCACACAGGCACTAGGGCAAGCCCCCAGCTCCAAAGGCTTTaGCGACATCTCCTGGACATG | + |
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Preference number: 4 (lower is better) Translates to: GPHERPAPGPHTGTRASPQLQRL*RHLLDM Trigger: CATGTCCAGGAGATGTCGCCAAAGCCTTTGGAGCTG...GGGGCTTGCCCTAGTGCCTGTGTGGGGCCCAGGAGCAGGGCGCTCGTGGGGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR GCA 90 bp | GGGCCCCACGAGCGCCCTGCTCCTGGGCCCCACACAGGCACTAGGGCAAGCCCCGCACAGCTTCCAAGATaGGGCTCATCCTCTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: GPHERPAPGPHTGTRASPAQLPR*GSSSQD Trigger: ATCTTGAGAGGATGAGCCGCATCTTGGAAGCTGTGC...GGGGCTTGCCCTAGTGCCTGTGTGGGGCCCAGGAGCAGGGCGCTCGTGGGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR TCA 90 bp | CCTGCTCCTGGGCCCCACACAGGCACTAGGGCAAGCCCCAAGGTCTCGGGCTACCTGCTCCAGAGAGGATaGGCTCTTCCACCATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: PAPGPHTGTRASPKVSGYLLQRG*ALPPSL Trigger: GAGAGATGGTGGAAGAGCTCATCCTCTCTGGAGCAG...GTAGCCCGAGACCTTGGGGCTTGCCCTAGTGCCTGTGTGGGGCCCAGGAGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR CCA 90 bp | AGGCAGATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCAGCCCACTCCTGTCTTaGTTCGGGTGGTGCACACAG | + |
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Preference number: 4 (lower is better) Translates to: RQIRRGGAKHGERRLPLGSPLLS*FGWCTQ Trigger: CTGTGTGCACCACCCGAACCAAGACAGGAGTGGGCT...GCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTATCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGCCCCACACAGGCACTAGGGCAAGCCCCAAGGTCTCGGGCTACAAGAAAGAGTTTCAGCTTCTaGCCGTTCCTCTCGATCACC | + |
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Preference number: 4 (lower is better) Translates to: LLGPTQALGQAPRSRATRKSFSF*PFLSIT Trigger: GGTGATCGAGAGGAACGGGCAGAAGCTGAAACTCTT...TCTTGTAGCCCGAGACCTTGGGGCTTGCCCTAGTGCCTGTGTGGGGCCCAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR GCA 90 bp | AGGCAGATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCCCAAACACCGTGTTGTaGTGTTGGGTCACCCGGATG | + |
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Preference number: 4 (lower is better) Translates to: RQIRRGGAKHGERRLPLGPNTVL*CWVTRM Trigger: CATCCGGGTGACCCAACAGCACAACACGGTGTTTGG...GCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTATCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR CCA 90 bp | AGGCAGATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCACCGTGTTGTGCTGTTaGGTCACCCGGATGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQIRRGGAKHGERRLPLGTVLCC*VTRMNV Trigger: CACGTTCATCCGGGTGACCCAACAGCACAACACGGT...GCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTATCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR CCA 90 bp | AGGCAGATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCGGTGCACACAGAACCTaGTCCGACTCCCACTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: RQIRRGGAKHGERRLPLGGAHRT*SDSHFD Trigger: ATCAAAGTGGGAGTCGGACCAGGTTCTGTGTGCACC...GCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTATCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR CCA 90 bp | AGGCAGATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCTTTGGCGACATCTCCTaGACATGTGCAGCCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: RQIRRGGAKHGERRLPLGFGDIS*TCAASI Trigger: GATGGAGGCTGCACATGTCCAGGAGATGTCGCCAAA...GCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTATCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR TCA 90 bp | CTCCTGGGCCCCACACAGGCACTAGGGCAAGCCCCAAGGTCTCGGGCTACAAGAAATGATGGGAATCCCTaGGTAGGTTTGCTTCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGPTQALGQAPRSRATRNDGNP*VGLLRV Trigger: AACTCGAAGCAAACCTACTCAGGGATTCCCATCATT...TCTTGTAGCCCGAGACCTTGGGGCTTGCCCTAGTGCCTGTGTGGGGCCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR TCA 90 bp | AGGCAGATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCCAGATGAACTTCACCTaGGGCACAGCTTCCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RQIRRGGAKHGERRLPLGQMNFT*GTASKM Trigger: CATCTTGGAAGCTGTGCCTCAGGTGAAGTTCATCTG...GCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTATCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR TCA 90 bp | CTCAGTCTCAGCATCTGTGATAGCAGCCAGCCTGCCAAGGCAGATAAGGAGGGGACATGCCTCCCAGCATaGCAAAGTCTGCACCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LSLSICDSSQPAKADKEGTCLPA*QSLHQL Trigger: GAGCTGGTGCAGACTTTGTCATGCTGGGAGGCATGT...CCCCTCCTTATCTGCCTTGGCAGGCTGGCTGCTATCACAGATGCTGAGACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR GCA 90 bp | CTCAGTCTCAGCATCTGTGATAGCAGCCAGCCTGCCAAGGCAGATAAGGAGGGGTCTTGGTTCGGGTGGTaGACACAGAACCTGGTCCGA | + |
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Preference number: 4 (lower is better) Translates to: LSLSICDSSQPAKADKEGSWFGW*TQNLVR Trigger: TCGGACCAGGTTCTGTGTGCACCACCCGAACCAAGA...CCCCTCCTTATCTGCCTTGGCAGGCTGGCTGCTATCACAGATGCTGAGACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR CCA 90 bp | ATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCTCAACACTGTCTTGGTTCGGGTaGTGCACACAGAACCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: IRRGGAKHGERRLPLGSTLSWFG*CTQNLV Trigger: GACCAGGTTCTGTGTGCACCACCCGAACCAAGACAG...TGTTGAGCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR TCA 90 bp | ATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCTCAACACCATGTTGGCCACAATaGTGGGAATCCCTGAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: IRRGGAKHGERRLPLGSTPCWPQ*WESLSR Trigger: CCTACTCAGGGATTCCCATCATTGTGGCCAACATGG...TGTTGAGCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR GCA 90 bp | CTCAGTCTCAGCATCTGTGATAGCAGCCAGCCTGCCAAGGCAGATAAGGAGGGGGATCATTCTGCCCGCTaGCAGAACTCACGGCTACAT | + |
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Preference number: 4 (lower is better) Translates to: LSLSICDSSQPAKADKEGDHSAR*QNSRLH Trigger: ATGTAGCCGTGAGTTCTGGCAGCGGGCAGAATGATC...CCCCTCCTTATCTGCCTTGGCAGGCTGGCTGCTATCACAGATGCTGAGACTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGCCCCACACAGGCACTAGGGCAAGCCCCAAGGTCTCGGGCTACAAGAACGAATTCCACAAAATaGTCTGAATACCCATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LLGPTQALGQAPRSRATRTNSTK*SEYPLA Trigger: GGCCAATGGGTATTCAGAGCATTTTGTGGAATTCGT...TCTTGTAGCCCGAGACCTTGGGGCTTGCCCTAGTGCCTGTGTGGGGCCCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR TCA 90 bp | CTCAGTCTCAGCATCTGTGATAGCAGCCAGCCTGCCAAGGCAGATAAGGAGGGGAAACATGGCATGCTGTaGCATCACCACAGCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: LSLSICDSSQPAKADKEGKHGML*HHHSHL Trigger: GAGATGGCTGTGGTGATGTCACAGCATGCCATGTTT...CCCCTCCTTATCTGCCTTGGCAGGCTGGCTGCTATCACAGATGCTGAGACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR GCA 90 bp | ATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCTCAACAGCTGTAAACATGGCATaGTGTGACATCACCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: IRRGGAKHGERRLPLGSTAVNMA*CDITTA Trigger: GGCTGTGGTGATGTCACAGCATGCCATGTTTACAGC...TGTTGAGCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR GCA 90 bp | ATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCTCAACACAGCATGACAAAGTCTaGACCAGCTCCAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IRRGGAKHGERRLPLGSTQHDKV*TSSKGF Trigger: AAAGCCTTTGGAGCTGGTGCAGACTTTGTCATGCTG...TGTTGAGCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR CAA 90 bp | CCTGCTCCTGGGCCCCACACAGGCACTAGGGCAAGCCCCAAGGTCTCGGGCTACCTCCTGCTGAGCTCTTaGAGCTTGGCAGCCCCGACG | + |
|
Preference number: 5 (lower is better) Translates to: PAPGPHTGTRASPKVSGYLLLSS*SLAAPT Trigger: CGTCGGGGCTGCCAAGCTCAAAGAGCTCAGCAGGAG...GTAGCCCGAGACCTTGGGGCTTGCCCTAGTGCCTGTGTGGGGCCCAGGAGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR CAA 90 bp | CCTGCTCCTGGGCCCCACACAGGCACTAGGGCAAGCCCCAAGGTCTCGGGCTACCACCGTGTTGTGCTGTaGGGTCACCCGGATGAACGT | + |
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Preference number: 5 (lower is better) Translates to: PAPGPHTGTRASPKVSGYHRVVL*GHPDER Trigger: ACGTTCATCCGGGTGACCCAACAGCACAACACGGTG...GTAGCCCGAGACCTTGGGGCTTGCCCTAGTGCCTGTGTGGGGCCCAGGAGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR CAA 90 bp | CTCCTGGGCCCCACACAGGCACTAGGGCAAGCCCCAAGGTCTCGGGCTACAAGAACCTCGGATCGGCTCTaGAGGCTGCTCCGCTTAGGT | + |
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Preference number: 5 (lower is better) Translates to: LLGPTQALGQAPRSRATRTSDRL*RLLRLG Trigger: ACCTAAGCGGAGCAGCCTCAAGAGCCGATCCGAGGT...TCTTGTAGCCCGAGACCTTGGGGCTTGCCCTAGTGCCTGTGTGGGGCCCAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS-3UTR CAA 90 bp | AGGCAGATAAGGAGGGGAGGGGCGAAGCATGGTGAAAGGAGGCTTCCACTCGGCGAGATGATGTGCCCCTaGAGGCCATGGGCGGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: RQIRRGGAKHGERRLPLGEMMCP*RPWAES Trigger: TGACTCCGCCCATGGCCTCAAGGGGCACATCATCTC...GCCGAGTGGAAGCCTCCTTTCACCATGCTTCGCCCCTCCCCTCCTTATCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS GCA 90 bp | GAATGGTGTTCTCCACGTCCCCTTTGTAAGGCACTTCCACGGTCTTaGCCTCGGAGGCCCTGTACTCGGCGACGCCTCCTGCGTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: EWCSPRPLCKALPRS*PRRPCTRRRLLRVS Trigger: AGAAACACGCAGGAGGCGTCGCCGAGTACAGGGCCTCCGAGGGCAAGACCGTGGAAGTGCCTTACAAAGGGGACGTGGAGAACACCATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS TCA 90 bp | CTGCCCGTTCCTCTCGATCACCTCACCTGCACACTCGGTGTGGCCTaGAAACATGCCTCCCAGCATGACAAAGTCTGCACCAGCTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: LPVPLDHLTCTLGVA*KHASQHDKVCTSSK Trigger: TTTGGAGCTGGTGCAGACTTTGTCATGCTGGGAGGCATGTTTTCAGGCCACACCGAGTGTGCAGGTGAGGTGATCGAGAGGAACGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS GCA 90 bp | CAGCTTCCAAGATGCGGCTCATCCTCTCAAGATCATTCTGCCCGCTaGCAGAACTCACGGCTACATGCTGCAGGCATTCGGGGTGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: QLPRCGSSSQDHSAR*QNSRLHAAGIRGGF Trigger: AAACCCACCCCGAATGCCTGCAGCATGTAGCCGTGAGTTCTGGCAGCGGGCAGAATGATCTTGAGAGGATGAGCCGCATCTTGGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS CCA 90 bp | AGCTTCTGCCCGTTCCTCTCGATCACCTCACCTGCACACTCGGTGTaGCCTGAAAACATGCCTCCCAGCATGACAAAGTCTGCACCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SFCPFLSITSPAHSV*PENMPPSMTKSAPA Trigger: AGCTGGTGCAGACTTTGTCATGCTGGGAGGCATGTTTTCAGGCCACACCGAGTGTGCAGGTGAGGTGATCGAGAGGAACGGGCAGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS-3UTR CAA 90 bp | CTCAGTCTCAGCATCTGTGATAGCAGCCAGCCTGCCAAGGCAGATAAGGAGGGGTGCTCTGAATACCCATaGGCCACATCCAGGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: LSLSICDSSQPAKADKEGCSEYP*ATSRQM Trigger: CATCTGCCTGGATGTGGCCAATGGGTATTCAGAGCA...CCCCTCCTTATCTGCCTTGGCAGGCTGGCTGCTATCACAGATGCTGAGACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS GCA 90 bp | CTCTCAAGATCATTCTGCCCGCTGCCAGAACTCACGGCTACATGCTaGAGGCATTCGGGGTGGGTTTCCGCAAAACATTTCCAGTCATCC | + |
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Preference number: 5 (lower is better) Translates to: LSRSFCPLPELTATC*RHSGWVSAKHFQSS Trigger: GGATGACTGGAAATGTTTTGCGGAAACCCACCCCGAATGCCTGCAGCATGTAGCCGTGAGTTCTGGCAGCGGGCAGAATGATCTTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS GCA 90 bp | ATCCTCTCAAGATCATTCTGCCCGCTGCCAGAACTCACGGCTACATaGTGCAGGCATTCGGGGTGGGTTTCCGCAAAACATTTCCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: ILSRSFCPLPELTAT*CRHSGWVSAKHFQS Trigger: TGACTGGAAATGTTTTGCGGAAACCCACCCCGAATGCCTGCAGCATGTAGCCGTGAGTTCTGGCAGCGGGCAGAATGATCTTGAGAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS GCA 72 bp | TCTCCACGTCCCCTTTGTAAGGCACTTCCACGGTCTTaGCCTCGGAGGCCCTGTACTCGGCGACGCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SPRPLCKALPRS*PRRPCTRRRLL Trigger: CAGGAGGCGTCGCCGAGTACAGGGCCTCCGAGGGCAAGACCGTGGAAGTGCCTTACAAAGGGGACGTGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS CCA 72 bp | TCACCGCACTCAGCTGCGGGTAGCCCACTCCTGTCTTaGTTCGGGTGGTGCACACAGAACCTGGTCCGACTC | + |
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Preference number: 6 (lower is better) Translates to: SPHSAAGSPLLS*FGWCTQNLVRL Trigger: GAGTCGGACCAGGTTCTGTGTGCACCACCCGAACCAAGACAGGAGTGGGCTACCCGCAGCTGAGTGCGGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS TCA 72 bp | CCTCTCGATCACCTCACCTGCACACTCGGTGTGGCCTaGAAACATGCCTCCCAGCATGACAAAGTCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: PLDHLTCTLGVA*KHASQHDKVCT Trigger: GGTGCAGACTTTGTCATGCTGGGAGGCATGTTTTCAGGCCACACCGAGTGTGCAGGTGAGGTGATCGAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS GCA 72 bp | AGATGCGGCTCATCCTCTCAAGATCATTCTGCCCGCTaGCAGAACTCACGGCTACATGCTGCAGGCATTCGG | + |
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Preference number: 6 (lower is better) Translates to: RCGSSSQDHSAR*QNSRLHAAGIR Trigger: CCGAATGCCTGCAGCATGTAGCCGTGAGTTCTGGCAGCGGGCAGAATGATCTTGAGAGGATGAGCCGCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS GCA 72 bp | GCTTCCAAGATGCGGCTCATCCTCTCAAGATCATTCTaGCCGCTGCCAGAACTCACGGCTACATGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASKMRLILSRSF*PLPELTATCCR Trigger: CCTGCAGCATGTAGCCGTGAGTTCTGGCAGCGGGCAGAATGATCTTGAGAGGATGAGCCGCATCTTGGAAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS CAA 72 bp | TTGAGGCTGCTCCGCTTAGGTCGCAGCAGAACATCCTaGAAGTCGAGTTTAAGGTCCGCGTCTATGCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LRLLRLGRSRTS*KSSLRSASMRG Trigger: GCCCCGCATAGACGCGGACCTTAAACTCGACTTCAAGGATGTTCTGCTGCGACCTAAGCGGAGCAGCCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS GCA 72 bp | TCATTCTGCCCGCTGCCAGAACTCACGGCTACATGCTaGAGGCATTCGGGGTGGGTTTCCGCAAAACATTTC | + |
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Preference number: 6 (lower is better) Translates to: SFCPLPELTATC*RHSGWVSAKHF Trigger: GAAATGTTTTGCGGAAACCCACCCCGAATGCCTGCAGCATGTAGCCGTGAGTTCTGGCAGCGGGCAGAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS GCA 72 bp | AGATCATTCTGCCCGCTGCCAGAACTCACGGCTACATaGTGCAGGCATTCGGGGTGGGTTTCCGCAAAACAT | + |
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Preference number: 6 (lower is better) Translates to: RSFCPLPELTAT*CRHSGWVSAKH Trigger: ATGTTTTGCGGAAACCCACCCCGAATGCCTGCAGCATGTAGCCGTGAGTTCTGGCAGCGGGCAGAATGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS CCA 72 bp | CCAGAACTCACGGCTACATGCTGCAGGCATTCGGGGTaGGTTTCCGCAAAACATTTCCAGTCATCCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: PELTATCCRHSG*VSAKHFQSSRE Trigger: CTCCCTGGATGACTGGAAATGTTTTGCGGAAACCCACCCCGAATGCCTGCAGCATGTAGCCGTGAGTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS CCA 72 bp | CCGTTCCTCTCGATCACCTCACCTGCACACTCGGTGTaGCCTGAAAACATGCCTCCCAGCATGACAAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PFLSITSPAHSV*PENMPPSMTKS Trigger: AGACTTTGTCATGCTGGGAGGCATGTTTTCAGGCCACACCGAGTGTGCAGGTGAGGTGATCGAGAGGAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS CAA 72 bp | GTAAAAGTTCGCTCAAGATCCACCTCGGATCGGCTCTaGAGGCTGCTCCGCTTAGGTCGCAGCAGAACATCC | + |
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Preference number: 6 (lower is better) Translates to: VKVRSRSTSDRL*RLLRLGRSRTS Trigger: GGATGTTCTGCTGCGACCTAAGCGGAGCAGCCTCAAGAGCCGATCCGAGGTGGATCTTGAGCGAACTTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000260.13 |
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| CDS GCA 72 bp | CTCCTGCGTGTTTCTTCATGGCTGTGTCTGAGCTCATaGCATAGAAGAGTTTCAGCTTCTGCCCGTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LLRVSSWLCLSS*HRRVSASARSS Trigger: AGAGGAACGGGCAGAAGCTGAAACTCTTCTATGGCATGAGCTCAGACACAGCCATGAAGAAACACGCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS CAA 90 bp | TCTCCGGTCACCACGTTCCCTGCCATGATGGTGTGTTCGGGGAATTaGGATCGGACCAGTTTCACGAATTCCACAAAATGCTCTGAATAC | + |
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Preference number: 6 (lower is better) Translates to: SPVTTFPAMMVCSGN*DRTSFTNSTKCSEY Trigger: GTATTCAGAGCATTTTGTGGAATTCGTGAAACTGGTCCGATCCAAATTCCCCGAACACACCATCATGGCAGGGAACGTGGTGACCGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS CAA 72 bp | ACCACGTTCCCTGCCATGATGGTGTGTTCGGGGAATTaGGATCGGACCAGTTTCACGAATTCCACAAAATGC | + |
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Preference number: 6 (lower is better) Translates to: TTFPAMMVCSGN*DRTSFTNSTKC Trigger: GCATTTTGTGGAATTCGTGAAACTGGTCCGATCCAAATTCCCCGAACACACCATCATGGCAGGGAACGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS TCA 72 bp | TCTCAAATGTCCCCACAGTGTCCATGTTGGCCACAATaGTGGGAATCCCTGAGTAGGTTTGCTTCGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SQMSPQCPCWPQ*WESLSRFASSF Trigger: GAAACTCGAAGCAAACCTACTCAGGGATTCCCATCATTGTGGCCAACATGGACACTGTGGGGACATTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000260.13 ENSMUST00000128873.2 |
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| CDS CAA 90 bp | GTTTGCTTCGAGTTTCGAAATGTAAAAGTTCGCTCAAGATCCACCTaGAACCACTCTACACATTTCCCAGCACCGAGCCACAACTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: VCFEFRNVKVRSRST*NHSTHFPAPSHNSL Trigger: TAAGGAGTTGTGGCTCGGTGCTGGGAAATGTGTAGAGTGGTTCAAGGTGGATCTTGAGCGAACTTTTACATTTCGAAACTCGAAGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128873.2 |
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