Pregenerated sensors for GMNN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006715Ensembl transcript IDs: ENSMUST00000006898.10, ENSMUST00000110382.9, ENSMUST00000175689.8, ENSMUST00000176890.8, ENSMUST00000177253.2
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TTTAACATAGTGATAGCCCCAGGATTCAAACCTGGCTTCCAGCACTaGCACCGTGTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: FNIVIAPGFKPGFQH*HRVVSLPRAILKGN Trigger: GTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTACACGGTGCAAGTGCTGGAAGCCAGGTTTGAATCCTGGGGCTATCACTATGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| 3UTR-3UTR CAA 90 bp | ATCAAAGGCTTCCTGGGTGAGGTCTCCAACATCCTTATTTTCATTAGCTTCTGGTCCCAAAGCTTCCTTTaGAACAAGCCTTTTGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: IKGFLGEVSNILIFISFWSQSFL*NKPFGN Trigger: GTTGCCAAAAGGCTTGTTCAAAAGGAAGCTTTGGGA...CCAGAAGCTAATGAAAATAAGGATGTTGGAGACCTCACCCAGGAAGCCTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177253.2 |
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| 3UTR TCA 72 bp | TTATTTTCATTAGCTTCTGGACCACAGCTTGAAGTCTaGGATGCTAGCTGGTCATCCCAAAGCTTCCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: LFSLASGPQLEV*DASWSSQSFLL Trigger: CAAAAGGAAGCTTTGGGATGACCAGCTAGCATCTCAGACTTCAAGCTGTGGTCCAGAAGCTAATGAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177253.2 |
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| 3UTR CCA 72 bp | GATGGGTTCTCTTTACTTATAAGATCAAAGGCTTCCTaGGTGAGGTCTCCAACATCCTTATTTTCATTAGCT | + |
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Preference number: 3 (lower is better) Translates to: DGFSLLIRSKAS*VRSPTSLFSLA Trigger: AGCTAATGAAAATAAGGATGTTGGAGACCTCACCCAGGAAGCCTTTGATCTTATAAGTAAAGAGAACCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177253.2 |
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| CDS-3UTR GCA 90 bp | CTTCTGGACCACAGCTTGAAGTCTGAGATGCTAGCTGGTCATCCCAAAGCTTCCTCTTGGGCTCCCTCCTaGTTCTGCTTCATACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LLDHSLKSEMLAGHPKASSWAPS*FCFILR Trigger: TCTCAGTATGAAGCAGAAGCAGGAGGGAGCCCAAGA...GGAAGCTTTGGGATGACCAGCTAGCATCTCAGACTTCAAGCTGTGGTCCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177253.2 |
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| CDS-3UTR GCA 90 bp | GTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACGCTGGCAGTGCGTCCCACTCTTGGGCTCCCTCCTaGTTCTGCTTCATACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: VVSLPRAILKGNAGSASHSWAPS*FCFILR Trigger: TCTCAGTATGAAGCAGAAGCAGGAGGGAGCCCAAGA...GTGGGACGCACTGCCAGCGTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR CCA 90 bp | GTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACGCTGGCAGTGCGTCCCACTTCTTCACATTCTCTTaGGCTCCCTCCTGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VVSLPRAILKGNAGSASHFFTFS*APSCFC Trigger: GCAGAAGCAGGAGGGAGCCCAAGAGAATGTGAAGAA...GTGGGACGCACTGCCAGCGTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR CCA 90 bp | GTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACGCTGGCAGTGCGTCCCACAGATCAAAGGCTTCCTaGGTGAGGTCTCCAACATCC | + |
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Preference number: 4 (lower is better) Translates to: VVSLPRAILKGNAGSASHRSKAS*VRSPTS Trigger: GGATGTTGGAGACCTCACCCAGGAAGCCTTTGATCT...GTGGGACGCACTGCCAGCGTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR GCA 90 bp | TTCCAGCACTTGCACCGTGTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACGCCATGTACTGCACGTaGTCAGCTACTTCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: FQHLHRVVSLPRAILKGNAMYCT*SATSAK Trigger: CTTGGCAGAAGTAGCTGAGCACGTGCAGTACATGGC...GTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTACACGGTGCAAGTGCTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR CCA 90 bp | ATCAAAGGCTTCCTGGGTGAGGTCTCCAACATCCTTATTTTCATTAGCTTCTGGGACTTCACATTCTCTTaGGCTCCCTCCTGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: IKGFLGEVSNILIFISFWDFTFS*APSCFC Trigger: GCAGAAGCAGGAGGGAGCCCAAGAGAATGTGAAGTC...CCAGAAGCTAATGAAAATAAGGATGTTGGAGACCTCACCCAGGAAGCCTTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177253.2 |
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| CDS-3UTR GCA 90 bp | GTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACGCTGGCAGTGCGTCCCACGCAACTCATTTTCTCTaGCAACAAGAGATCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: VVSLPRAILKGNAGSASHATHFL*QQEIHL Trigger: CAGATGGATCTCTTGTTGGCAGAGAAAATGAGTTGC...GTGGGACGCACTGCCAGCGTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR CCA 90 bp | TTCCAGCACTTGCACCGTGTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACTTCTTCACATTCTCTTaGGCTCCCTCCTGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FQHLHRVVSLPRAILKGNFFTFS*APSCFC Trigger: GCAGAAGCAGGAGGGAGCCCAAGAGAATGTGAAGAA...GTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTACACGGTGCAAGTGCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR CCA 90 bp | TTCCAGCACTTGCACCGTGTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACCTTCAGCGTTCTCCTTaGGACAGGACTATTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: FQHLHRVVSLPRAILKGNLQRSP*DRTILH Trigger: GTGAAGAATAGTCCTGTCCCAAGGAGAACGCTGAAG...GTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTACACGGTGCAAGTGCTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR CCA 90 bp | GTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACGCTGGCAGTGCGTCCCACTTTGAACAAGCCTTTTaGCAACTCATTTTCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VVSLPRAILKGNAGSASHFEQAF*QLIFSA Trigger: GGCAGAGAAAATGAGTTGCCAAAAGGCTTGTTCAAA...GTGGGACGCACTGCCAGCGTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR CCA 90 bp | AGATCAAAGGCTTCCTGGGTGAGGTCTCCAACATCCTTATTTTCATTAGCTTCTCTTCAGCGTTCTCCTTaGGACAGGACTTCACATTCT | + |
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Preference number: 4 (lower is better) Translates to: RSKASWVRSPTSLFSLASLQRSP*DRTSHS Trigger: AGAATGTGAAGTCCTGTCCCAAGGAGAACGCTGAAG...AGAAGCTAATGAAAATAAGGATGTTGGAGACCTCACCCAGGAAGCCTTTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177253.2 |
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| CDS-3UTR GCA 90 bp | TTCCAGCACTTGCACCGTGTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACGCAACTCATTTTCTCTaGCAACAAGAGATCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: FQHLHRVVSLPRAILKGNATHFL*QQEIHL Trigger: CAGATGGATCTCTTGTTGGCAGAGAAAATGAGTTGC...GTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTACACGGTGCAAGTGCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR CCA 90 bp | GTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACGCTGGCAGTGCGTCCCACCCAATACTGAGAAGATaGGTTCTCTTTACTTATAAG | + |
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Preference number: 4 (lower is better) Translates to: VVSLPRAILKGNAGSASHPILRR*VLFTYK Trigger: CTTATAAGTAAAGAGAACCCATCTTCTCAGTATTGG...GTGGGACGCACTGCCAGCGTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR CCA 90 bp | TTCCAGCACTTGCACCGTGTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACTTTGAACAAGCCTTTTaGCAACTCATTTTCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: FQHLHRVVSLPRAILKGNFEQAF*QLIFSA Trigger: GGCAGAGAAAATGAGTTGCCAAAAGGCTTGTTCAAA...GTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTACACGGTGCAAGTGCTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS GCA 90 bp | CCTCTCGATTACCTCCGCCATGTACTGCACGTGCTCAGCTACTTCTaGCAAGTCTTTATTCTCCTTTCTCAGGCGGGCAATCTCACTGTC | + |
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Preference number: 5 (lower is better) Translates to: PLDYLRHVLHVLSYF*QVFILLSQAGNLTV Trigger: GACAGTGAGATTGCCCGCCTGAGAAAGGAGAATAAAGACTTGGCAGAAGTAGCTGAGCACGTGCAGTACATGGCGGAGGTAATCGAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 ENSMUST00000175689.8 ENSMUST00000176890.8 |
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| CDS-3UTR CAA 90 bp | GGCTTCCTGGGTGAGGTCTCCAACATCCTTATTTTCATTAGCTTCTGGACCACAGGACTTCACATTCTCTaGGGCTCCCTCCTGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GFLGEVSNILIFISFWTTGLHIL*GSLLLL Trigger: CAGAAGCAGGAGGGAGCCCAAGAGAATGTGAAGTCC...TGTGGTCCAGAAGCTAATGAAAATAAGGATGTTGGAGACCTCACCCAGGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177253.2 |
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| CDS-3UTR CAA 90 bp | GTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACGCTGGCAGTGCGTCCCACCTTCTGGACCACAGCTaGAAGTCTGAGATGCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: VVSLPRAILKGNAGSASHLLDHS*KSEMLA Trigger: AGCTAGCATCTCAGACTTCAAGCTGTGGTCCAGAAG...GTGGGACGCACTGCCAGCGTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS-3UTR CAA 90 bp | GTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACGCTGGCAGTGCGTCCCACTCCCAAAGCTTCCTTTaGAACAAGCCTTTTGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: VVSLPRAILKGNAGSASHSQSFL*NKPFGN Trigger: GTTGCCAAAAGGCTTGTTCAAAAGGAAGCTTTGGGA...GTGGGACGCACTGCCAGCGTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS CCA 90 bp | AGCTTTCCTCCGCTGCTCTGCCACTTCTTTCCAATACTGAGAAGATaGGTTCTCTTTACTTATAAGATCAAAGGCTTCCTGGGTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SFPPLLCHFFPILRR*VLFTYKIKGFLGEV Trigger: GACCTCACCCAGGAAGCCTTTGATCTTATAAGTAAAGAGAACCCATCTTCTCAGTATTGGAAAGAAGTGGCAGAGCAGCGGAGGAAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 ENSMUST00000175689.8 ENSMUST00000176890.8 |
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| CDS-3UTR CAA 90 bp | TTCCAGCACTTGCACCGTGTAGTTAGTTTACCAAGAGCTATACTAAAGGGCAACCTTCTGGACCACAGCTaGAAGTCTGAGATGCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: FQHLHRVVSLPRAILKGNLLDHS*KSEMLA Trigger: AGCTAGCATCTCAGACTTCAAGCTGTGGTCCAGAAG...GTTGCCCTTTAGTATAGCTCTTGGTAAACTAACTACACGGTGCAAGTGCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 |
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| CDS GCA 72 bp | TCATTACTCAGCCTCTCGATTACCTCCGCCATGTACTaGACGTGCTCAGCTACTTCTGCCAAGTCTTTATTC | + |
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Preference number: 6 (lower is better) Translates to: SLLSLSITSAMY*TCSATSAKSLF Trigger: GAATAAAGACTTGGCAGAAGTAGCTGAGCACGTGCAGTACATGGCGGAGGTAATCGAGAGGCTGAGTAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 ENSMUST00000175689.8 ENSMUST00000176890.8 |
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| CDS CCA 72 bp | CCGCTGCTCTGCCACTTCTTTCCAATACTGAGAAGATaGGTTCTCTTTACTTATAAGATCAAAGGCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLLCHFFPILRR*VLFTYKIKGFL Trigger: CAGGAAGCCTTTGATCTTATAAGTAAAGAGAACCCATCTTCTCAGTATTGGAAAGAAGTGGCAGAGCAGCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006898.10 ENSMUST00000110382.9 ENSMUST00000175689.8 ENSMUST00000176890.8 |
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